|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006431 ID=TCONS_00006431|Name=TCONS_00006431|organism=Clytia hemisphaerica|type=transcript|length=666bp
TGTTATTTAAGATATTTTAGAAGCCACTCTATAATCTACCAACTATTTAT
TTTAACGatataaatttttatataatgaTAATGATTCATTAAAATTAGAA
TTATTAAATACTACTTTAACATATTATTCTTCTGAAGTAAGCTTCTCGAT
CAACGAGAGTAAGTTTGTGCGTTTCACATGCAAGAATGGTCTGCTACTTT
CCTTTTCATTCATACCCCGTTTTTGGTCAGAAAATCCATCTTTATTTAAT
TTATCTCCGATTCTTCTCAATATTAGACCACGCGTGCCAAGATTGAACGC
TTTCAGAACGCGCTTTTCTTCTTTAATTTCAGCTTCTATCATGTCATTTG
AGACTTCACGTTTTAATTGATTGTACAATTGTTTCAAGTCATACGTTGAT
GCTTCACGTCCCAGTCTAGGTACTTCTTCAGCTTCTCGTCCTAGTCTAGG
TACCAATTCGATCTCTCTTCCAAGCCTAGGTACCTCCTCAATTTCTCTTC
CAAGCCTAGGTACTTCTCGTTTACCAAGTCGAGGTACTGCATCCCGTTTT
TCGATCGTGTCCAGTAGCTTAGTTACCAGAGCATCTTCCTCACGTGTCAA
GGAGGCGGAGTAAACATTATTTGCCAGGAATAATACCAAAAAGACCAACA
CACAGTTCATgttacc Run BLAST on NCBI transcript from alignment at sc0000067:489868..490818+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006431 ID=TCONS_00006431|Name=TCONS_00006431|organism=Clytia hemisphaerica|type=transcript|length=951bp|location=Sequence derived from alignment at sc0000067:489868..490818+ (Clytia hemisphaerica)
TGTTATTTAAGATATTTTAGAAGCCACTCTATAATCTACCAACTATTTAT
TTTAACGatataaatttttatataatgaTAATGATTCATTAAAATTAGAA
TTATTAAATACTACTTTAACATATTATTCTTCTGAAGTAAGCTTCTCGAT
CAACGAGAGTAAGTTTGTGCGTTTCACATGCAAGAATGGTCTGCTACTTT
CCTTTTCATTCATACCCCGTTTTTGGTCAGAAAATCCATCTTTATTTAAT
TTATCTCCGATTCTTCTCAATATTAGACCACGCGTGCCAAGATTGAACGC
TTTCAGAACGCGCTTTTCTTCTTTAATTTCAGCTTCTATCATGTCATTTG
AGACTTCACGTTTTAATTGATTGTACAATTGTTTCAAGTCATACGTTGAT
GCTTCACGTCCCAGTCTAGGTACTTCTCGTTTTCCTAATCTTGGAATTTC
ACGCTTTCCAAGCCGTGGTACTTCTCGGCCTAACCTGGGAACTTCGAGTT
CTCTTCCCAGCCTAGGTACTTCTCTACCCAATCTTGGAACTTCGTCAATT
TCACGACCAAGCCTTGGCACTTCTTCCATCTCACGTCCTAGTCTGGGAAC
CTCTCTCCCAAGTCTCGGAACTTCGACTTCTCGACCAAGCCTGGGTACCA
ATTCGACTTCTCGACCAAGCCTGGGTACCAATTCAACTTCTCGACCAAGC
CTAGGTACTTCTTCAGCTTCTCGTCCTAGTCTAGGTACCAATTCGATCTC
TCTTCCAAGCCTAGGTACCTCCTCAATTTCTCTTCCAAGCCTAGGTACTT
CTCGTTTACCAAGTCGAGGTACTGCATCCCGTTTTTCGATCGTGTCCAGT
AGCTTAGTTACCAGAGCATCTTCCTCACGTGTCAAGGAGGCGGAGTAAAC
ATTATTTGCCAGGAATAATACCAAAAAGACCAACACACAGTTCATgttac
c
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006431-exon-sc0000067-1491911889:489868..490286 | TCONS_00006431-exon-sc0000067-1491911889:489868..490286 | Clytia hemisphaerica | exon |
| TCONS_00006431-exon-sc0000067-1510915933:489868..490286 | TCONS_00006431-exon-sc0000067-1510915933:489868..490286 | Clytia hemisphaerica | exon |
| TCONS_00006431-exon-sc0000067-1575043694:489868..490286 | TCONS_00006431-exon-sc0000067-1575043694:489868..490286 | Clytia hemisphaerica | exon |
| TCONS_00006431-exon-sc0000067-1491911889:490572..490818 | TCONS_00006431-exon-sc0000067-1491911889:490572..490818 | Clytia hemisphaerica | exon |
| TCONS_00006431-exon-sc0000067-1510915933:490572..490818 | TCONS_00006431-exon-sc0000067-1510915933:490572..490818 | Clytia hemisphaerica | exon |
| TCONS_00006431-exon-sc0000067-1575043694:490572..490818 | TCONS_00006431-exon-sc0000067-1575043694:490572..490818 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067 | supercontig | sc0000067:489868..490818 + |
Blast
The following BLAST results are available for this feature:
|
