TCONS_00006374 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006374
Unique NameTCONS_00006374
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006374 ID=TCONS_00006374|Name=TCONS_00006374|organism=Clytia hemisphaerica|type=transcript|length=226bp
ATTTATAATGTATAGTGGAAAACACAaggggaagaaatttttaaaaataa
ttataaatatttgaaatggaaaagaaaagagaatatGCAAACTTGCATGC
TTCGATTCAAATATTCGATAGTGAGATCCAACACCTTGTGAACGAATGCA
AATCAAAAGATGACGGCATCCAACATTTCGACGATCAATTTCCACCAAGT
CACGTGCATTTCCCTACAGTTATCAA
Run BLAST on NCBI

transcript from alignment at sc0000066:644944..645169

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006374 ID=TCONS_00006374|Name=TCONS_00006374|organism=Clytia hemisphaerica|type=transcript|length=226bp|location=Sequence derived from alignment at sc0000066:644944..645169 (Clytia hemisphaerica)
TTGATAACTGTAGGGAAATGCACGTGACTTGGTGGAAATTGATCGTCGAA
ATGTTGGATGCCGTCATCTTTTGATTTGCATTCGTTCACAAGGTGTTGGA
TCTCACTATCGAATATTTGAATCGAAGCATGCAAGTTTGCatattctctt
ttcttttccatttcaaatatttataattatttttaaaaatttcttcccct
TGTGTTTTCCACTATACATTATAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003647XLOC_003647Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006374-exon-sc0000066-1491911889:644944..645169TCONS_00006374-exon-sc0000066-1491911889:644944..645169Clytia hemisphaericaexon
TCONS_00006374-exon-sc0000066-1510915933:644944..645169TCONS_00006374-exon-sc0000066-1510915933:644944..645169Clytia hemisphaericaexon
TCONS_00006374-exon-sc0000066-1575043694:644944..645169TCONS_00006374-exon-sc0000066-1575043694:644944..645169Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:644944..645169 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	39.4718	28.7918	20.2627	12.1948	3.79461	16.4508	0	2.99899	9.73317	3.88769	10.8671	5.48803	6.76081	9.52821	8.37693	6.26132	0	0	1.29077	1.1735	12.0867	10.7871	4.63091	4.94223	4.99801	5.09218
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006374 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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