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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006355 ID=TCONS_00006355|Name=TCONS_00006355|organism=Clytia hemisphaerica|type=transcript|length=1081bp
NGACTTAAAAACCCACCCAAAGAGGCAACGCTGTTGTAATGTGAAATTCC
AACCGATTCAAGGGAGAGTTAAGTGCTATTCATCATCTTTCTTTCCCTCC
ACCGTACAGTACTGGAATAAATTGCCATCAAATATTGCAAACCTTGTTGA
tgaaaacgaatttaaaaaagaaatagatgAAATTTAACTTTAGGAATTTA
AACTCTTACAAAATCACTAAGATAGATAAAACTTACACTAAACTACTTAC
TCAAATCCTTTTGCTAGTTTTTGAATGAATTCTCACACTTTTCCACACTA
ATCTACCAGACTGGCAAGCACACATAAATCATGTAGAAACAAAGATAAAA
CAAGGTTCAGGCCTCATACGTAAGCTTTGTCATTTAATATCACCTTCTAA
TATCTCTTCTCTGTATTATGCATTTATAAATTCACACCTAGCATATTGTA
TTACATCTTGGGGCTCCCCAAATACAAAGGGAACAGGTAAGTTAAATTCT
GTGATAGATAGCAtaacaaataaaattaaaaaaatctatgaaaaaaataa
tctaaaCAGGTTTAGCACATTAAAGATAAATTCACTATATAAATTAGAGT
GTGGTAAACTAATATATAAACATGTAAATAATAAACTATCAGCTGATTAT
CTAAGCACATTATTCACCAAACCATCCCATTCTCTTGGTACACGACAGCC
AGCAAAAAACTCTCTAACGACTTTAGTCTTTGACAATTCACCCTCTCCTA
TTCGGTTCTATGGCCCCCATATCTGGAATCAACAATGTCTAAATATCAAA
TCCACCAGCTTTTCTGTGTTTGCtcgaaaactcaaatcaaaattaCTCAA
TGATAACTAAGTTCCCATCTAGTGTCTTATTCAACCACGTTTATTATCAT
CCACAAACCAAGTGTAAATATTTTCGTATTGTATCTCCTGTTGTTGTAtt
atcttttgttgttttttcttttctctagTTAGTATCTCTTGTACATTATC
ACTCCATATATCCTTTCGAACTCGAAAGCCTCTTAGGGTTGTTTTTCGCT
Taggattttttaaatgtaaatagatctgaaa Run BLAST on NCBI transcript from alignment at sc0000066:324199..325279 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006355 ID=TCONS_00006355|Name=TCONS_00006355|organism=Clytia hemisphaerica|type=transcript|length=1081bp|location=Sequence derived from alignment at sc0000066:324199..325279 (Clytia hemisphaerica)
tttcagatctatttacatttaaaaaatcctAAGCGAAAAACAACCCTAAG
AGGCTTTCGAGTTCGAAAGGATATATGGAGTGATAATGTACAAGAGATAC
TAActagagaaaagaaaaaacaacaaaagataaTACAACAACAGGAGATA
CAATACGAAAATATTTACACTTGGTTTGTGGATGATAATAAACGTGGTTG
AATAAGACACTAGATGGGAACTTAGTTATCATTGAGtaattttgatttga
gttttcgaGCAAACACAGAAAAGCTGGTGGATTTGATATTTAGACATTGT
TGATTCCAGATATGGGGGCCATAGAACCGAATAGGAGAGGGTGAATTGTC
AAAGACTAAAGTCGTTAGAGAGTTTTTTGCTGGCTGTCGTGTACCAAGAG
AATGGGATGGTTTGGTGAATAATGTGCTTAGATAATCAGCTGATAGTTTA
TTATTTACATGTTTATATATTAGTTTACCACACTCTAATTTATATAGTGA
ATTTATCTTTAATGTGCTAAACCTGtttagattatttttttcatagattt
ttttaattttatttgttaTGCTATCTATCACAGAATTTAACTTACCTGTT
CCCTTTGTATTTGGGGAGCCCCAAGATGTAATACAATATGCTAGGTGTGA
ATTTATAAATGCATAATACAGAGAAGAGATATTAGAAGGTGATATTAAAT
GACAAAGCTTACGTATGAGGCCTGAACCTTGTTTTATCTTTGTTTCTACA
TGATTTATGTGTGCTTGCCAGTCTGGTAGATTAGTGTGGAAAAGTGTGAG
AATTCATTCAAAAACTAGCAAAAGGATTTGAGTAAGTAGTTTAGTGTAAG
TTTTATCTATCTTAGTGATTTTGTAAGAGTTTAAATTCCTAAAGTTAAAT
TTcatctatttcttttttaaattcgttttcaTCAACAAGGTTTGCAATAT
TTGATGGCAATTTATTCCAGTACTGTACGGTGGAGGGAAAGAAAGATGAT
GAATAGCACTTAACTCTCCCTTGAATCGGTTGGAATTTCACATTACAACA
GCGTTGCCTCTTTGGGTGGGTTTTTAAGTCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006355-exon-sc0000066-1491911889:324199..325279 | TCONS_00006355-exon-sc0000066-1491911889:324199..325279 | Clytia hemisphaerica | exon |
| TCONS_00006355-exon-sc0000066-1510915933:324199..325279 | TCONS_00006355-exon-sc0000066-1510915933:324199..325279 | Clytia hemisphaerica | exon |
| TCONS_00006355-exon-sc0000066-1575043694:324199..325279 | TCONS_00006355-exon-sc0000066-1575043694:324199..325279 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066 | supercontig | sc0000066:324199..325279 . |
Blast
The following BLAST results are available for this feature:
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