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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006352 ID=TCONS_00006352|Name=TCONS_00006352|organism=Clytia hemisphaerica|type=transcript|length=1116bp
GATTTTTAAAGTTCAGATTCTTCACCAACAAACAAAATCCGCAAATTCTA
ACTATGAGCAATAGATAGAGCAGGTCAAAGATGATATATtgagccaaaaa
tcaaaacaaaatttgggcGGAGGGCTTCAAAATGACGCCATAAGTAAAAA
TCTGCCTAATTAGGCACGTTAGTTCTAATTAGGAATATTTACAAGCATAA
TAATTTCCCgcacttttttttcttcttgtcaCCACCTGTGTTTTTTTACT
TCGttcattcatttttattttaaagccCGTGCTACATTATAAATGTTTAT
CTGCTACGGTGTAGATAGGGCAATACACCCGCGTTTTATACGCGTTTTTG
TCGCgggtaatataacatttttcTAAATGTCATAACTCAAGACTCCATCC
ATATTACCCtgtatcaaactttcaaaatctgctctacACACTAAATTTTT
CATTGGAGGCTGATAAGAATCTGCggaaatttgtacttttggaaaaaaac
tggaaattcgatatatattcttaattaggattgaaaaacaaagggataat
cctaattaagaaagtCTGTGCGATCGAGAAAAATATGCTTAATTAGGATA
GAACTCCTGACTgccgaatcagcaccctcaaattgaccaaaatcaattct
aaaaagtgaaacgttttggtGGCACTGGTCATGGCCTAGACTGGCAGTTG
ACTGATGATTATTGCAATGCTGGAATTTTTTACTATTCAACTTGACATTG
ATTGTCTGATTGTGCCCTAGAAAGGTCTGTGAGAAACAGGTACAAGTGCA
GCAAGAGCATGTTTAGATTTACACCACATTTTTCCTTAGCTACCAAAAGC
TATTCAAAACAAGATGACAGAAGTGATAGTAGAGTAGATAGATAGAGAGA
GAAAAGACAAAAGAAGGACTCaatctcaaaaattttgatggaCAGATGGA
TCTCATGAAATCCATCCAatttttagaccaatgaaagaCAATACAGATAG
AAATACTTACTTACAAAATAAACTGTACCATTTGTAAAGTGGAATAAAAA
TACAGAAAAGAttaaaaatagagaaaatacTTCAGTTTCTAACCACCATT
TTGTGATTTGTTGCTT Run BLAST on NCBI transcript from alignment at sc0000066:249155..250270 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006352 ID=TCONS_00006352|Name=TCONS_00006352|organism=Clytia hemisphaerica|type=transcript|length=1116bp|location=Sequence derived from alignment at sc0000066:249155..250270 (Clytia hemisphaerica)
AAGCAACAAATCACAAAATGGTGGTTAGAAACTGAAgtattttctctatt
tttaaTCTTTTCTGTATTTTTATTCCACTTTACAAATGGTACAGTTTATT
TTGTAAGTAAGTATTTCTATCTGTATTGtctttcattggtctaaaaatTG
GATGGATTTCATGAGATCCATCTGtccatcaaaatttttgagattGAGTC
CTTCTTTTGTCTTTTCTCTCTCTATCTATCTACTCTACTATCACTTCTGT
CATCTTGTTTTGAATAGCTTTTGGTAGCTAAGGAAAAATGTGGTGTAAAT
CTAAACATGCTCTTGCTGCACTTGTACCTGTTTCTCACAGACCTTTCTAG
GGCACAATCAGACAATCAATGTCAAGTTGAATAGTAAAAAATTCCAGCAT
TGCAATAATCATCAGTCAACTGCCAGTCTAGGCCATGACCAGTGCCacca
aaacgtttcactttttagaattgattttggtcaatttgagggtgctgatt
cggcAGTCAGGAGTTCTATCCTAATTAAGCATATTTTTCTCGATCGCACA
Gactttcttaattaggattatccctttgtttttcaatcctaattaagaat
atatatcgaatttccagtttttttccaaaagtacaaatttccGCAGATTC
TTATCAGCCTCCAATGAAAAATTTAGTGTgtagagcagattttgaaagtt
tgatacaGGGTAATATGGATGGAGTCTTGAGTTATGACATTTAgaaaaat
gttatattacccGCGACAAAAACGCGTATAAAACGCGGGTGTATTGCCCT
ATCTACACCGTAGCAGATAAACATTTATAATGTAGCACGggctttaaaat
aaaaatgaatgaaCGAAGTAAAAAAACACAGGTGGtgacaagaagaaaaa
aaagtgcGGGAAATTATTATGCTTGTAAATATTCCTAATTAGAACTAACG
TGCCTAATTAGGCAGATTTTTACTTATGGCGTCATTTTGAAGCCCTCCgc
ccaaattttgttttgatttttggctcaATATATCATCTTTGACCTGCTCT
ATCTATTGCTCATAGTTAGAATTTGCGGATTTTGTTTGTTGGTGAAGAAT
CTGAACTTTAAAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006352-exon-sc0000066-1491911889:249155..250270 | TCONS_00006352-exon-sc0000066-1491911889:249155..250270 | Clytia hemisphaerica | exon |
| TCONS_00006352-exon-sc0000066-1510915933:249155..250270 | TCONS_00006352-exon-sc0000066-1510915933:249155..250270 | Clytia hemisphaerica | exon |
| TCONS_00006352-exon-sc0000066-1575043694:249155..250270 | TCONS_00006352-exon-sc0000066-1575043694:249155..250270 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066 | supercontig | sc0000066:249155..250270 . |
Blast
The following BLAST results are available for this feature:
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