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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006340 ID=TCONS_00006340|Name=TCONS_00006340|organism=Clytia hemisphaerica|type=transcript|length=1194bp
AATTAAAGTGCTCTGAATAATCTTTACAACGGTATTTAATATGGTAGGAA
AATGAAGTATTTGCTGAAAATTTGCAAgtaaaacaaagattagtgcacac
ttaaagcagATGGACTTTAGtagactttttccatataaattTGGGTAATT
TATCAGAACGATACTCTGAATTCCCAAACGTCTTGTTTTCAAGAAAacct
tttcagccattttccaaggggtaaaaAATCACCCcctattttatgtattt
ttactAGAATCTTAACACCCAACCCCTGCTTATTTTTCCCTGAATACAGT
AACATATATGGTTTTTTGTTGTAGCTTTTATTGCATTTGAATTGTGATTT
TAAGGGTAGTGACAGCAGCGTAGTGGCAGGGGGAGACTTCCCTGTAACAT
ATTTTTAAGGGGATGCCGAAAGATAAATGAGACGCTCCTTTGCCATTTAA
ACCCTTAAACTAGCAGTTTTCAGTATTTTTCCCTAAGTTATTTTTCCTAA
ATATGGGGTTACCAAGATACTAACTTGCCTCTCTAGTTTGCCCAAATTTT
GCTACTGGAAAGTGGCTGAATGGTTATTTTGTGTTGCCAAGTTTTTGTGT
TAACTATTAAAGTGGACTGACTTTTCTTACGCAGTGTAAGGGTATGAAAG
TGGCGTTTCTTACTGAACTTATTTCGGTTGACACCCACTTTTTGCcgaga
ttttttcatttttccaatggTTTATAAGAttatgttcagacgttacggtt
tcgtataGCTAGTTTTTGGTTTAATGATTGGTTTCGAAACGTTTTAAATC
AAGAAAAGGGAACAGTTCCCTTCAAATGAAAATAGAAGAGCGCATTGTTT
TGATACATTTTTCTTCGTAACGTTTTCTTTTTCgacgtttcaaatttttg
gtgCCCGCACAGTGTTTTGAAACCGTTTCGTTTGGAACCTTAATGTCTGA
GCTAATAAGTTAAAGATTTGAATTAAAGTTACTTTTAACCTTATTTGCTA
ATTGCCTCAAATTGAAGTCAAGTCAAGTGGCGAAATTAAGTTTTTCTGTT
CGCTAAAGTATAAAAAAGCTGCTTTGAATTCTTGTAAcgttttgtaaatt
ttatgtatttatcagatttcaatttattttcttGAGATGTTCTGTATGTT
TTGATAAAGTACTTTTTTGAATCAAATTGTAGTTTGATAAGGAT Run BLAST on NCBI transcript from alignment at sc0000066:64328..65521 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006340 ID=TCONS_00006340|Name=TCONS_00006340|organism=Clytia hemisphaerica|type=transcript|length=1194bp|location=Sequence derived from alignment at sc0000066:64328..65521 (Clytia hemisphaerica)
ATCCTTATCAAACTACAATTTGATTCAAAAAAGTACTTTATCAAAACATA
CAGAACATCTCaagaaaataaattgaaatctgataaatacataaaattta
caaaacgTTACAAGAATTCAAAGCAGCTTTTTTATACTTTAGCGAACAGA
AAAACTTAATTTCGCCACTTGACTTGACTTCAATTTGAGGCAATTAGCAA
ATAAGGTTAAAAGTAACTTTAATTCAAATCTTTAACTTATTAGCTCAGAC
ATTAAGGTTCCAAACGAAACGGTTTCAAAACACTGTGCGGGcaccaaaaa
tttgaaacgtcGAAAAAGAAAACGTTACGAAGAAAAATGTATCAAAACAA
TGCGCTCTTCTATTTTCATTTGAAGGGAACTGTTCCCTTTTCTTGATTTA
AAACGTTTCGAAACCAATCATTAAACCAAAAACTAGCtatacgaaaccgt
aacgtctgaacataaTCTTATAAAccattggaaaaatgaaaaaatctcgG
CAAAAAGTGGGTGTCAACCGAAATAAGTTCAGTAAGAAACGCCACTTTCA
TACCCTTACACTGCGTAAGAAAAGTCAGTCCACTTTAATAGTTAACACAA
AAACTTGGCAACACAAAATAACCATTCAGCCACTTTCCAGTAGCAAAATT
TGGGCAAACTAGAGAGGCAAGTTAGTATCTTGGTAACCCCATATTTAGGA
AAAATAACTTAGGGAAAAATACTGAAAACTGCTAGTTTAAGGGTTTAAAT
GGCAAAGGAGCGTCTCATTTATCTTTCGGCATCCCCTTAAAAATATGTTA
CAGGGAAGTCTCCCCCTGCCACTACGCTGCTGTCACTACCCTTAAAATCA
CAATTCAAATGCAATAAAAGCTACAACAAAAAACCATATATGTTACTGTA
TTCAGGGAAAAATAAGCAGGGGTTGGGTGTTAAGATTCTagtaaaaatac
ataaaataggGGGTGATTttttaccccttggaaaatggctgaaaaggtTT
TCTTGAAAACAAGACGTTTGGGAATTCAGAGTATCGTTCTGATAAATTAC
CCAaatttatatggaaaaagtctaCTAAAGTCCATctgctttaagtgtgc
actaatctttgttttacTTGCAAATTTTCAGCAAATACTTCATTTTCCTA
CCATATTAAATACCGTTGTAAAGATTATTCAGAGCACTTTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006340-exon-sc0000066-1491911889:64328..65521 | TCONS_00006340-exon-sc0000066-1491911889:64328..65521 | Clytia hemisphaerica | exon |
| TCONS_00006340-exon-sc0000066-1510915933:64328..65521 | TCONS_00006340-exon-sc0000066-1510915933:64328..65521 | Clytia hemisphaerica | exon |
| TCONS_00006340-exon-sc0000066-1575043694:64328..65521 | TCONS_00006340-exon-sc0000066-1575043694:64328..65521 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066 | supercontig | sc0000066:64328..65521 . |
Blast
The following BLAST results are available for this feature:
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