TCONS_00006304 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006304
Unique NameTCONS_00006304
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2129

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006304 ID=TCONS_00006304|Name=TCONS_00006304|organism=Clytia hemisphaerica|type=transcript|length=2129bp
CTTATATCTCAGTTGAAGATCAGTGGCGATGGTACAAAGCTGACAAGGAA
ATCGAATCTCGTGGTGATGTCCTATACAATCCTGGAAGAAGACAAAGAAA
ACCATTTCAAGTCGTCAGCCAATAACGCTATCGCGGTGGCCATGGTTGAC
GAATCTTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGT
ACACACTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCC
CAATTGATTTGATGATTGGTGGAGATTACAAGTTCTTGTTAACACTCCTT
GGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATATC
AACAGAAGACAGACAAGATCCTGAAAAGACTGGAAAACCAAGAACGACAA
AGAATTGGACATCCCAGCCTGGAGTCAAAGCCAAACGTATATTTGAAAAT
GTGCCATTGTGTAAATACATGGTAGATGAGTTACATCTACTACTAAGAGT
TACAGACCGACTTGAAGATGGTCTCTTCCATACTATCATAGATCAGGATC
AGAAAAATGGAGACAACAAAGGGCAGACAGCCTTGATCAGTGCAATGAAG
GGATGTGGGATAACCTTAAAGTTCTGGAAAGACAAAAAGGACAAGAACTA
TGAATGGACCTCCCTGATGggaaatgataaaaagaaaatgCTCCGGAAGC
TACCAAGccattttcatgaatttttacCACCAGCGCAGGTTGAACCAACA
AAAGAATTGTGGAATGACTTTGAACATTTGTACAACACGATGAACCGACC
ATCACTCAGTGCAGAAGAAATTGATGTTTTCGAGAACAAGGCCAAAGAAT
GGATTCATAAGTTACAGAAAATGAATGGTTGTGGGTACAGTTGGAATAAT
CCAGTAACACCGTATATCCATATCATGTGCAAGCACGTGCCAGAAATTTT
GAGAGAATTTGGAACCTTAAGATTATTTAGTGGACAAGGTGTGGAAAAGA
AGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAATCGAAAAGAG
GCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAAACTTGAAGA
AGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCGAAGAATAAC
TTTCAACTGGCAGACCAACTTTTTcataatgtttatgtttatatatttta
taagaatctttTATATTTTACTTACCATTTGACAGTGAGTTTTGAAGTTA
GCTGTTTGACTTTTGAAATGCAATGTTCCTCAGATATACCAgacatgaaa
agaaaaagaaaaacgtgaAAATGTTTCAACGTGATATCTTACAATCTAAT
TTATCAAGTTCTTGAATTATAGCTTGTCTATCTCCTCCCTTGCCTATCTT
AGAGGGCAACTACAACCATAATAACCAGCCAAACTTGCAAGGTTATTTTC
CATATATATTTCCATAAAATAAGATTAGTTATGAATAATTAATAAGAATT
AAAAGTGTCTTTAAAAATAGTGACTGAAAGCCTCTGAATTATGCGTTGTT
TTTTCTCCCTAACCTCACCAGATTTATGCTTCTGGTAGAGCTTCggggat
tttgataaaaaactacGCACAACCACAGGAAATAAAATAATCCTTTTCGT
CCCTCTCTTGTTTATGAGCCCAGAATGCCAATTGTTGGGGAACCAGTGAG
GATCAAAATCTTCCTCATTGAGAGATTTATTCCCTCTTTTCTTATCCACC
CCCCTCCCATGGAAAAGATACCGAAAAATAGCTACTGGAAAGTCCAGAAC
TTTCACACTTCGCAGTCGCTCTTTTAGGGCGGTCTCAAAGCAAGAGAGTA
GACGCTCAACATAATAATCAACTTGCCTCATGTCAGGTGCTGGATGTTCC
CAAAAGctgtgaaaattaaatttggaaaaagttgaaaaaatatcGAAAGT
GTGATATAAGCACAAAAGATTTCCCACTTAGCTTCGACAGATCAAACAAT
CCATTTAATACATTCaataaataaaagagaaaagtcatgaaaaaaattat
cagcTTACTGTAAAAGTCTGACGTCCAATAAATTTTGAGTGGGTTCCCAT
GTGCAATCGTCACTTCCCCAGCCGTACCA
Run BLAST on NCBI

protein sequence of TCONS_00006304-protein

>TCONS_00006304-protein ID=TCONS_00006304-protein|Name=TCONS_00006304-protein|organism=Clytia hemisphaerica|type=polypeptide|length=382bp
LISQLKISGDGTKLTRKSNLVVMSYTILEEDKENHFKSSANNAIAVAMVD
ESYDDISTSFADIINDVHTISENQTIRTHGRDIPIDLMIGGDYKFLLTLL
GMKAATSKHSCIYCDISTEDRQDPEKTGKPRTTKNWTSQPGVKAKRIFEN
VPLCKYMVDELHLLLRVTDRLEDGLFHTIIDQDQKNGDNKGQTALISAMK
GCGITLKFWKDKKDKNYEWTSLMGNDKKKMLRKLPSHFHEFLPPAQVEPT
KELWNDFEHLYNTMNRPSLSAEEIDVFENKAKEWIHKLQKMNGCGYSWNN
PVTPYIHIMCKHVPEILREFGTLRLFSGQGVEKKNDQLRKIFHSKINRKE
ACINLLRVEKRAQKLEEDGYSRQKRRYVRSEE
Run BLAST on NCBI

transcript from alignment at sc0000066:406871..409971-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006304 ID=TCONS_00006304|Name=TCONS_00006304|organism=Clytia hemisphaerica|type=transcript|length=3101bp|location=Sequence derived from alignment at sc0000066:406871..409971- (Clytia hemisphaerica)
CTTATATCTCAGTTGAAGATCAGTGGCGATGGTACAAAGCTGACAAGGAA
ATCGAATCTCGTGGTGATGTCCTATACAATCCTGGAAGAAGACAAAGAAA
ACCATTTCAAGTCGTCAGGTATAAAAAGGAAAAATCATGCTAAAGACAAG
ACTTAAAATGAGCGGTGTAGTGTGGTTGACCAAAACTTAAAAAAATTATA
GGATATCCTTTTATAAACACTCTTTTTAACATTACAGCCAATAACGCTAT
CGCGGTGGCCATGGTTGACGAATCTTACGACGATATTTCAACAAGCTTTG
CTGATATCATAAATGATGTACACACTATAAGTGAAAACCAAACAATTCGT
ACTCATGGGAGAGACATCCCAATTGATTTGATGATTGGTGGAGATTACAA
GGTAAGAGGATTTTTTTCAAATAGAAAAGACTCCCCAAGCATACTGAAAT
AAATCGAAAAACCTTCTTTCTTTTTTCAAGCAAGGCTTGTTTTACTTAAA
AAACTAAATTTACCTTTCAGTTCTTGTTAACACTCCTTGGTATGAAGGCT
GCCACATCGAAACATTCGTGTATATACTGTGACATATCAACAGAAGACAG
GTAACCAATACCCCTATAAGAAAATAGATAGAAATTTATCCACATATCTG
AGTTTTAAACATTGTTTTATTTTGAAAATCAAAGTCAAAGGTTATCAAAT
TTTACTTCTAGACAAGATCCTGAAAAGACTGGAAAACCAAGAACGACAAA
GAATTGGACATCCCAGCCTGGAGTCAAAGCCAAACGTATATTTGAAAATG
TGCCATTGTGTAAATACATGGTAGATGAGTTACATCTACTACTAAGAGTT
ACAGACCGACTTGAAGATGGTCTCTTCCATACTATCATAGATCAGGATCA
GGTAGGTTTGTAAAAATTAATTACTTTTCTTGGACTTCTTTCTTTGATCT
ACTTTTAGAGTTAGAAAAGACCCATCTTAATTCATAGCTCAAATATCTAT
TACTTTTGAATAAGCCCTCTTAATAGATACAAATTCCTTTTCAGAAAAAT
GGAGACAACAAAGGGCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGG
GATAACCTTAAAGTTCTGGAAAGACAAAAAGGACAAGAACTATGAATGGA
CCTCCCTGATGGGAAATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGC
CATTTTCATGAATTTTTACCACCAGCGCAGGTTGAACCAACAAAAGAATT
GTGGAATGTAAGTTGCCTGTTAAATGCTTAAGTGGAGGCATTCTTAATGC
TTTGAATATAATTCAGGAGTCTACTTTACTTTATTCAAATCCAAAGAACA
GTCTCAAAAATAGTAGTTACCTTTATCTCTTAGGACTTTGAACATTTGTA
CAACACGATGAACCGACCATCACTCAGTGCAGAAGAAATTGATGTTTTCG
AGAACAAGGTGATGATAATCTACAATAGAAGATTGATCAAATTTATCATT
GATGTCTGATTGAAACACTTTTAAGTGGATTTCATAGTGTCCCAGGAAAA
GAGATATTATGAAATAACAGAATCTCTTTTGAACACTAAATTTATACTTC
TTTATAGGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGTG
GGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAAG
CACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTGG
ACAAGGTATGTGATAACTACTCAATTTGTTCATCTAAATTTTTAATAATT
TTAATTCAATATAAGCATTAAAAAGAGCTTGTTGTAAATCCTTTATAGAA
TAAAGCTAAAATTTTAATTAACCAAGAATGTTAAAAGGTTTAGTATGTCA
AAGTAGGTTTAGTATATCTACAAATTTATCCTGACAGAAATTGTTTATCT
TTATTCAAAGGTGTGGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCA
CAGCAAGATCAATCGAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAA
AAAGAGCACAAAAACTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGA
TATGTGAGGTCCGAAGAATAACTTTCAACTGGCAGACCAACTTTTTCATA
ATGTTTATGTTTATATATTTTATAAGAATCTTTTATATTTTACTTACCAT
TTGACAGTGAGTTTTGAAGTTAGCTGTTTGACTTTTGAAATGCAATGTTC
CTCAGATATACCAGACATGAAAAGAAAAAGAAAAACGTGAAAATGTTTCA
ACGTGATATCTTACAATCTAATTTATCAAGTTCTTGAATTATAGCTTGTC
TATCTCCTCCCTTGCCTATCTTAGAGGGCAACTACAACCATAATAACCAG
CCAAACTTGCAAGGTTATTTTCCATATATATTTCCATAAAATAAGATTAG
TTATGAATAATTAATAAGAATTAAAAGTGTCTTTAAAAATAGTGACTGAA
AGCCTCTGAATTATGCGTTGTTTTTTCTCCCTAACCTCACCAGATTTATG
CTTCTGGTAGAGCTTCGGGGATTTTGATAAAAAACTACGCACAACCACAG
GAAATAAAATAATCCTTTTCGTCCCTCTCTTGTTTATGAGCCCAGAATGC
CAATTGTTGGGGAACCAGTGAGGATCAAAATCTTCCTCATTGAGAGATTT
ATTCCCTCTTTTCTTATCCACCCCCCTCCCATGGAAAAGATACCGAAAAA
TAGCTACTGGAAAGTCCAGAACTTTCACACTTCGCAGTCGCTCTTTTAGG
GCGGTCTCAAAGCAAGAGAGTAGACGCTCAACATAATAATCAACTTGCCT
CATGTCAGGTGCTGGATGTTCCCAAAAGCTGTGAAAATTAAATTTGGAAA
AAGTTGAAAAAATATCGAAAGTGTGATATAAGCACAAAAGATTTCCCACT
TAGCTTCGACAGATCAAACAATCCATTTAATACATTCAATAAATAAAAGA
GAAAAGTCATGAAAAAAATTATCAGCTTACTGTAAAAGTCTGACGTCCAA
TAAATTTTGAGTGGGTTCCCATGTGCAATCGTCACTTCCCCAGCCGTACC
A

Coding sequence (CDS) from alignment at sc0000066:406871..409971-

>TCONS_00006304 ID=TCONS_00006304|Name=TCONS_00006304|organism=Clytia hemisphaerica|type=CDS|length=9192bp|location=Sequence derived from alignment at sc0000066:406871..409971- (Clytia hemisphaerica)
GTGTGGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATC
AATCGAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACA
AAAACTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGT
CCGAAGAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGT
TGTGGGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTG
CAAGCACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTA
GTGGACAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACT
CAGTGCAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACA
AAGGGCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTA
AAGTTCTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGAT
GGGAAATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATG
AATTTTTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACA
AGATCCTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCC
AGCCTGGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAA
TACATGGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGA
AGATGGTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACAC
TCCTTGGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGAC
ATATCAACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACG
AATCTTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTA
CACACTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCC
AATTGATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGA
TCAGTGGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATG
TCCTATACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGG
TGTGGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCA
ATCGAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAA
AAACTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTC
CGAAGAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTT
GTGGGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGC
AAGCACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAG
TGGACAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTC
AGTGCAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAA
AGGGCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAA
AGTTCTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATG
GGAAATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGA
ATTTTTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAA
GATCCTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCA
GCCTGGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAAT
ACATGGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAA
GATGGTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACT
CCTTGGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACA
TATCAACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGA
ATCTTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTAC
ACACTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCA
ATTGATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGAT
CAGTGGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGT
CCTATACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGT
GTGGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAA
TCGAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAA
AACTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCC
GAAGAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTG
TGGGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCA
AGCACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGT
GGACAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCA
GTGCAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAA
GGGCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAA
GTTCTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGG
GAAATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAA
TTTTTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAG
ATCCTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAG
CCTGGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATA
CATGGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAG
ATGGTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTC
CTTGGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACAT
ATCAACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAA
TCTTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACA
CACTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAA
TTGATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATC
AGTGGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTC
CTATACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGTG
TGGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAAT
CGAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAA
ACTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCG
AAGAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGT
GGGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAA
GCACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTG
GACAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCAG
TGCAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAAG
GGCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAAG
TTCTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGGG
AAATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAAT
TTTTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAGA
TCCTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAGC
CTGGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATAC
ATGGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAGA
TGGTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTCC
TTGGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATA
TCAACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAAT
CTTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACAC
ACTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAAT
TGATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATCA
GTGGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTCC
TATACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGTGT
GGAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAATC
GAAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAAA
CTTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCGA
AGAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGTG
GGTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAAG
CACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTGG
ACAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCAGT
GCAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAAGG
GCAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAAGT
TCTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGGGA
AATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAATT
TTTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAGAT
CCTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAGCC
TGGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATACA
TGGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAGAT
GGTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTCCT
TGGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATAT
CAACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAATC
TTACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACACA
CTATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAATT
GATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATCAG
TGGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTCCT
ATACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGTGTG
GAAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAATCG
AAAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAAAC
TTGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCGAA
GAATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGTGG
GTACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAAGC
ACGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTGGA
CAAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCAGTG
CAGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAAGGG
CAGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAAGTT
CTGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGGGAA
ATGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAATTT
TTACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAGATC
CTGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAGCCT
GGAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATACAT
GGTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAGATG
GTCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTCCTT
GGTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATATC
AACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAATCT
TACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACACAC
TATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAATTG
ATTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATCAGT
GGCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTCCTA
TACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGTGTGG
AAAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAATCGA
AAAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAAACT
TGAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCGAAG
AATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGTGGG
TACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAAGCA
CGTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTGGAC
AAGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCAGTGC
AGAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAAGGGC
AGACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAAGTTC
TGGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGGGAAA
TGATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAATTTT
TACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAGATCC
TGAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAGCCTG
GAGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATACATG
GTAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAGATGG
TCTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTCCTTG
GTATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATATCA
ACAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAATCTT
ACGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACACACT
ATAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAATTGA
TTTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATCAGTG
GCGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTCCTAT
ACAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAGGTGTGGA
AAAGAAGAATGACCAACTGCGGAAAATCTTTCACAGCAAGATCAATCGAA
AAGAGGCTTGCATTAATCTCTTGAGAGTTGAAAAAAGAGCACAAAAACTT
GAAGAAGATGGTTATTCGAGGCAAAAGAGACGATATGTGAGGTCCGAAGA
ATAAGCCAAAGAATGGATTCATAAGTTACAGAAAATGAATGGTTGTGGGT
ACAGTTGGAATAATCCAGTAACACCGTATATCCATATCATGTGCAAGCAC
GTGCCAGAAATTTTGAGAGAATTTGGAACCTTAAGATTATTTAGTGGACA
AGGACTTTGAACATTTGTACAACACGATGAACCGACCATCACTCAGTGCA
GAAGAAATTGATGTTTTCGAGAACAAGAAAAATGGAGACAACAAAGGGCA
GACAGCCTTGATCAGTGCAATGAAGGGATGTGGGATAACCTTAAAGTTCT
GGAAAGACAAAAAGGACAAGAACTATGAATGGACCTCCCTGATGGGAAAT
GATAAAAAGAAAATGCTCCGGAAGCTACCAAGCCATTTTCATGAATTTTT
ACCACCAGCGCAGGTTGAACCAACAAAAGAATTGTGGAATACAAGATCCT
GAAAAGACTGGAAAACCAAGAACGACAAAGAATTGGACATCCCAGCCTGG
AGTCAAAGCCAAACGTATATTTGAAAATGTGCCATTGTGTAAATACATGG
TAGATGAGTTACATCTACTACTAAGAGTTACAGACCGACTTGAAGATGGT
CTCTTCCATACTATCATAGATCAGGATCAGTTCTTGTTAACACTCCTTGG
TATGAAGGCTGCCACATCGAAACATTCGTGTATATACTGTGACATATCAA
CAGAAGACAGCCAATAACGCTATCGCGGTGGCCATGGTTGACGAATCTTA
CGACGATATTTCAACAAGCTTTGCTGATATCATAAATGATGTACACACTA
TAAGTGAAAACCAAACAATTCGTACTCATGGGAGAGACATCCCAATTGAT
TTGATGATTGGTGGAGATTACAAGCTTATATCTCAGTTGAAGATCAGTGG
CGATGGTACAAAGCTGACAAGGAAATCGAATCTCGTGGTGATGTCCTATA
CAATCCTGGAAGAAGACAAAGAAAACCATTTCAAGTCGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003597XLOC_003597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006304-exon-sc0000066-1575043694:409854..409971TCONS_00006304-exon-sc0000066-1575043694:409854..409971Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:409571..409734TCONS_00006304-exon-sc0000066-1575043694:409571..409734Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:409372..409451TCONS_00006304-exon-sc0000066-1575043694:409372..409451Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:409071..409260TCONS_00006304-exon-sc0000066-1575043694:409071..409260Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:408715..408927TCONS_00006304-exon-sc0000066-1575043694:408715..408927Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:408514..408588TCONS_00006304-exon-sc0000066-1575043694:408514..408588Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:408217..408364TCONS_00006304-exon-sc0000066-1575043694:408217..408364Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1575043694:406871..408011TCONS_00006304-exon-sc0000066-1575043694:406871..408011Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:409854..409971TCONS_00006304-exon-sc0000066-1510915933:409854..409971Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:409571..409734TCONS_00006304-exon-sc0000066-1510915933:409571..409734Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:409372..409451TCONS_00006304-exon-sc0000066-1510915933:409372..409451Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:409071..409260TCONS_00006304-exon-sc0000066-1510915933:409071..409260Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:408715..408927TCONS_00006304-exon-sc0000066-1510915933:408715..408927Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:408514..408588TCONS_00006304-exon-sc0000066-1510915933:408514..408588Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:408217..408364TCONS_00006304-exon-sc0000066-1510915933:408217..408364Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1510915933:406871..408011TCONS_00006304-exon-sc0000066-1510915933:406871..408011Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:409854..409971TCONS_00006304-exon-sc0000066-1491911889:409854..409971Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:409571..409734TCONS_00006304-exon-sc0000066-1491911889:409571..409734Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:409372..409451TCONS_00006304-exon-sc0000066-1491911889:409372..409451Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:409071..409260TCONS_00006304-exon-sc0000066-1491911889:409071..409260Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:408715..408927TCONS_00006304-exon-sc0000066-1491911889:408715..408927Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:408514..408588TCONS_00006304-exon-sc0000066-1491911889:408514..408588Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:408217..408364TCONS_00006304-exon-sc0000066-1491911889:408217..408364Clytia hemisphaericaexon
TCONS_00006304-exon-sc0000066-1491911889:406871..408011TCONS_00006304-exon-sc0000066-1491911889:406871..408011Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006304-proteinTCONS_00006304-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:406871..409971 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.03102	1.13243	2.3403	2.23449	2.7787	2.20853	4.43577	4.11156	3.13384	4.08991	6.69944	3.38604	6.82578	5.82039	2.31534	3.12377	1.03221	1.37546	7.08165	7.60762	1.85623	1.97543	2.07279	1.3821	2.26249	1.06105	3.48521	2.98649	4.27037	3.32951
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006304 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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