TCONS_00006255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006255
Unique NameTCONS_00006255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1696

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006255 ID=TCONS_00006255|Name=TCONS_00006255|organism=Clytia hemisphaerica|type=transcript|length=1696bp
tttagaatgaGTGAAACCTatggagaagaaaaaaatcctaAATGAAATCT
ACAAGACTGAGAAAAGTTACTTGCACCATTTGGTTTTACTAAAAACCTTA
TTTTTGGAGCCATTGAAAATCTCATCAGTGCTACCAGCTCGACACATTGA
TGGAATCTTTTCAAATATTGAGGCGATCTATCAAGTCAGTGCTCACTTGT
TGGAGCTGATGGAATCTGAAGGTGTCATCCATGCCCTATTAAACCTTGCT
CCATATCTCAAATTGTATTCACTCTATGCCAATAACTTCAACACATCCAA
TAAACTATTAGAGGAATGTCTAAAGAATTATCCAGACTTCCACAGACTGG
TATCATTTCAAGAGACGCGAGAGGAGATGCAATGTTTGAAACTATCTGCA
CTTCTTGTTACTCCCATTCAACGTGTACCAAGGTATAGACTTTTAGTCGA
AACACTTTTGGCAAAGACACCAGCAGATgcaattgattttaaaaagctca
aagATGCATACAACAAACTGAATGAAATAGCTATTCACATCAACGAATGT
GTCCGACagcatgaaaatttcatgacCATGTTGGGTATTCAGAACcgttt
ctctggaaatcaacgACCACAAATTATTGCTCCAGGAAGGAAGTTCTTGA
AAGAAGGAAATCTCACCAAGATCACAACAAGTGGTCATGTCAAACTTCGA
AAAGTTTATCTCTTCAACGATATTCTTCTCGTCGCAAAATGTGAATCCAA
TGGGTTGTTATCTTGTCGTGAGATTTTTGAATTGAACGATTCAATCTTCG
AAAGTGTTTTGGGAAACACTTCCAACGGCAATGGAGTGTTCAGGaTGATA
GACAAGAAGAAGAGTTTGGTTTTATGTTGCATGGAAGAAACAAATACCTG
GGCTTCGGATATCAAAAATGCTATTCAGAATGTACATTGCACCTCGAATC
GATTCATCTCTATTGAGAATggtgaaaagaaaagaattttcctGAATGGT
GCCAAGaCCAGAGAATCGcagaaatcggaaaaaatgttgaaaaggcaAAC
AGTTTTGGAGAGCAAATCCACCAGCTCCATCATCGCATCAAATGCTGCAA
ATAACAACAACAATGTCTCATCTGATGCCAATCATTATTACCATAAAAAc
gacaccattgattccacgaTCACCAGCAAGTGGCTTCACAACAATACTGA
CTCAGCGGTCTTTGAATCCGGACAGCCAAGTGTTGCCATTGAAAATAGCA
ACGTAAATAATGGAAGTGGCACTGCTGCATTCAAACAACATTGGAGTTTA
AGTTTCTCATCAGGGATAGAGAACCGACCTTCCATCAGGTCTTTACGTGG
TAGCATCCAACAAATCATTAGTTGTTCCCCTTCAAAACGTAAGAGAAAAA
CTTCCGAGGCTTCTATTGTTCAAGAAAAAAAACAGAAAACTATGCACAAT
GATTCAAATGATTATGGgaCGGGGATTGGGGAGAATCAAAAGGACCAATC
ATATTCAAGTTGCAGAGTAATGTAAGTTAGCTTATAAAATGTATTTTCTC
TATTTATAGTGGTTTTTTGTTAGataatttaatgatatttttgtactgta
ttttttgattttttgtatgtttttgtatctttttttttttacttgggAGT
AATTATTATCAAGGGAATAGCTATATAGTCATATAATGAATCAAag
Run BLAST on NCBI

transcript from alignment at sc0000066:332034..339267+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006255 ID=TCONS_00006255|Name=TCONS_00006255|organism=Clytia hemisphaerica|type=transcript|length=7234bp|location=Sequence derived from alignment at sc0000066:332034..339267+ (Clytia hemisphaerica)
tttagaatgaGTGAAACCTatggagaagaaaaaaatcctaAATGAAATCT ACAAGACTGAGAAAAGTTACTTGCACCATTTGGTTTTACTAAAAACCGTA AgctcaaaatctttcaaattttagtctttTAGTATTTATATTTGACATTT CTCTGCTTCATCTCCTAATTATATTAACCTGTCTACATTAAGTTTTCTGA AAATGATAATGACTGCCTCTTTTGGatataaaatattctgaaaacttttg acaatctgtcaaaaatttaaaattcagctatctgcaaaatataggacata tttttttattattttcatccaTAGTTATTTTTGGAGCCATTGAAAATCTC ATCAGTGCTACCAGCTCGACACATTGATGGAATCTTTTCAAATATTGAGG CGATCTATCAAGTCAGTGCTCACTTGTTGGAGCTGATGGAATCTGAAGGT GTCATCCATGCCCTATTAAACCTTGCTCCATATCTCAAATTGTATTCACT CTATGCCAATAACTTCAACACATCCAATAAACTATTAGAGGTAtcatttt gagataaatttcaattaaattcaaattattttctagAAAGCTTTTCTTCT TTGCTATATCCCTAGAGAATATATTATGTTTGTGTTTGACGGCTTAAAAT TTACTATTATTCATCAGATTATCCTAACTTACAGTCTTCTCGATTTACAA TCCGTTCAGAAGTGACTTCCACTTAAAtgtcattttctgaataatttgtA GGAATGTCTAAAGAATTATCCAGACTTCCACAGACTGGTATCATTTCAAG AGACGCGAGAGGAGATGCAATGTTTGAAACTATCTGCACTTCTTGTTACT CCCATTCAACGTGTACCAAGGTGTGTTTCTACTTTTTATCTTTACACAGA ACCCAATAAACTGTAATTTGCTCATAAGAAGATTTTTTCTACTCCTagtt taaaaatgaaagttgtaTCTAGGCTGGGTACTTATGATACaattaaaaat catttgatCATACTTTTAAGctaaatttttaaacattaattGTTTTATAC AGGTATAGACTTTTAGTCGAAACACTTTTGGCAAAGACACCAGCAGATgc aattgattttaaaaagctcaaaggtacaaatttgaatattacttaaaggg ataatcagatggtttgagatatttagattacagaaaccttcctgtggtcc ttagtaaaacctcgaagtatttttgtgtaataaTTTTCCAATTAatcgag atatcaaaattttaaatttttgaaaacgggttcttacacggttcttacgt tgaaattctattgttttcatcgTAAAAGCCAAAAACTAGTAGCTTAAATA TCTCGACTAAGGAAAATAGTCAGGCAAAATAATTTAGgattttgctcagg acaatagaaggatctcacatgccaaatattgcaaaccatctgattatccc tttaaaagattgaaagataatttttatAGGCTGTTTCATTGGACACAGCA GATAAATCAGGCTGGTAATAAATGAAATTATGTCAGAGGTCTTATGACAA TATCACTTTGAAGAGGTATAGTGAATTTGGTGGAGTTGTTTCTTGGGTCA TCATAAATTAAATGGAACCAATCCCCAAATTCACTGATTTTGATGTTTAC ATATTGTATATCGttgaaaaaaactttagaaatttcttttcagACAATAC AATATACAGTGTGTGGAGAAACAGAACATAATTTTCATGAATAATTCTCA AAatctttattgatttttataaCCTTATTACTCAATAAGGTAACCTTGAA ATTTCTTTCATCAAATCAGCGCATTTGTACCAGTTTTCAGTATCCTTATG GTTTTAGTCATAAGGGGCCTGACTAAAACCTCTGATAAACTTCTCAGTTC AAATTATATTAATTTCAGTAATAAACTTCTCAGCTCAAATTACAGGAATT TTAGTTTCAAACAGATTCCTAAACATGCATTTTGTCTTTTTCACAGATGC ATACAACAAACTGAATGAAATAGCTATTCACATCAACGAATGTGTCCGAC agcatgaaaatttcatgacCATGTTGGGTATTCAGAACcgtttctctgga aatcaacgACCACAAATTATTGCTCCAGGTACGATGCTGCGcttttttga aagctttataAAGTGATTCAGAAAGTGGCTTCTTTTTCGCAAATCTATTA TCTTAGAACCCTAGTGTACATATCTCCCAACTGATAAACCCAAACGTTTG GTATCAGTTAAGTGGTAAAGACTTTGTTGTATAACCAGGGGATaagcaat atttttaaaatcttataGTCGGGATTGGAAATTTGTCAACtcactctaat tcgaacctctattattcgaatctttctgtaattcgaactaaaatagtGGT CCCCTAACTGGAAAGTGGTTtcaattactctctgtaattcgaagaaCGTT TTTGGGCTCATGAGGTccaatcgaattagagagagtcaactgtagttGGT AAAATGCTGTACAGAAGATTTCTGATTTATAGCAGTATTATGAGTAGGCA TCATATCCTGGATTGACAGGGGCAAATTAGAAAACCATGCAGTAAAAGTA TCTAAGATTCTTGACCATGTAACAAATTGTTTAGATAGCCAATGAAAGAC TAGATTTCTTCTTGTTTTAGGAAGGAAGTTCTTGAAAGAAGGAAATCTCA CCAAGGTGACCatgctgtccaatattttcattttaaaccaAGTTTTCTGA TGTCTttattctttgttttcttgaatTTACCACAGTTGATGATAAGCTAA GAAAACATATACCCTATCTAGCAGAAACCTCTAAAGATAATATCAAAAAT CCATCCTATATGGTGCTTTGCTTTCgaagtttttaccaaaatttgatatt ttcaggtttttttctttccaatatatggcaaagattttcgaaaaatgagt CCCATGCAGGGCTAAAATCATACTGCTTTCAAATCCTCTCCTTATATTTT CCATCTATCTCATTTTGTAGATCACAACAAGTGGTCATGTCAAACTTCGA AAAGTTTATCTCTTCAACGATATTCTTCTCGTCGCAAAATGTGAATCCAA TGGGTAAATTTCTCTACATTATGTTTGTGATCACTGCGTTATCAAAATCC AACCATTAGGTCGATTGTTGTTAATTTTACTTGATGTTTTTTGGCTTTAT CAATTAAATCttttaccttaagtggataaattttcgcgtggacttttttt cgcgaattaagaatctaaaaatttcgcgtggacaaaatttcgcgaatcag cctctttttcaccCGATTTCTTTCATTATCCTAgaggttttggccaattt ttagatttcaaatatttcgcgtggacaaaatttcgcgaaaacggccaaaa ttcgcgaaaaccgcgaaaattaatccacgcaaaatttaatccacttaagg gcAAAATATAGTGTTCAGAGACCAAGAAGTTAGGCTCCaaacttttctaa aaatttggGAGTAATAAAAAAACGAGTCTTTCATGAGGGGATTATCTTTA AATTAGAAGATTTTTCTGAGATGCTCTATATATGTTAGTCAAGGCTATGA AGAGCCTGGTTTATTCCGAACGGCTGCCCAAATATTGGCGATCTGAAACA CAGGTATTAACTTCAATATGGAAAAATTTCGTTCTCGTTTTAGGTTGTTA TCTTGTCGTGAGATTTTTGAATTGAACGATTCAATCTTCGAAAGTGTTTT GGGAAACACTTCCAACGGCAATGGAGTGTTCAGGGTTTGTCTTTGTGGTT TTCCTGATTATTTCAACCTCTTGAAAAGGCTACATCCTCCAGTTAAAAAC AGGAATTTATTGCCCCATTCTCAAAAGAAGCTAGACATTTTAATAATGAC TCGGTTACTAGTTAACTACTGAAAGCCTTGACAAGTTTTAGGAAGTTCTA TAAATTCAACtgagtttttattgaaatcaaactttgatggactttttaat tgaaaacgaACTATTGAACCCAATACATAcatattgttgaaattttaatt tttcttcagaTGATAGACAAGAAGAAGAGTTTGGTTTTATGTTGCATGGA AGAAACAAATACCTGGGCTTCGGATATCAAAAATGCTATTCAGTAATCtt tcaattttattcaaatttaacttCGCTTAAatatttagtattcagtttaA TCAGGTTTAATAACTAGCCATTATTTAATCCGTTGCAACTTTGTCCTGTG ATATGGGCAGGTCCCTAAGTAATCACTGCACCTTTaatgttgtaaaaaat attctgtaactttttaaagattttggcTTCCAACAGTCTTTTGTGGTTTA CGGTTAACCAGATTTAATAGCTAAAATAATTCCATTACTTTTTTTAGGAA TGTACATTGCACCTCGAATCGATTCATCTCTATTGAGAATggtgaaaaga aaagaattttcctGAATGGTGCCAAGGTTTTTGATTAGTTTCACGTTTCA ATTCAAAACCACATTTCTCTATCATATCATAtatgatatttattttttat attcgAACATCCTGGGTCCCCGCAACTGCTCATTTACCCGATTTCGAAGT TTGTTGCAACGCTCTATATACTAATCCCTAGCACCATGGgtgatttttta agctttttgaaaaatctggccGTGTGTTATCTCTTAGGGTTAGAGAAACC TATATTTTGTCAGTACTAGTATGCAAGTAAATCGAGGGGAATGCAACCAG CTTAATCTTTCCCGCGGAGAACTAAGATAACAGTTAACAtgatttatttg atatttttgtagaCCAGAGAATCGcagaaatcggaaaaaatgttgaaaag gcaAACAGTTTTGGAGAGCAAATCCACCAGCTCCATCATCGCATCAAATG CTGCAAATAACAACAACAATGTCTCATCTGATGCCAATCATTATTACCAT AAAAAcgacaccattgattccacgaTCACCAGCAAGTGGCTTCACAACAA TACTGACTCAGCGGTATTCTTCATAATAAATTATGTTCCAACAATCTtaa gtcaaatttttttctgattccgTTATTGTTTGTCTCGTGAAAGACAATGG GAACTTATGACAATGTGAAGTTGCCCGCCTTCCTCCATAGACTTCAATGC GTAATACTTGGCAAAGTTGCTTACAAATTAGCTGGAATTTATACTGAAAC ACATTCTCGTCTACCCTGTTAGACAAAAACCACTTTTTTTATCGCGCTTT ATCGTCTGTTGCTTTTTGCCGcggaatcgaatgtttttggaCGGGAAAGT CCGTCCAAGATTTTCTCTTCAGCACAGCTCATTTTGcataaaacagataa aaaatttggtttgtgggaaggtactggctaattCTTGTCAAGTTATCCCT TATTAACGATCAAAACTATTTGAACGGTCCACAACAGTTCCACAACTCGA ATCAATTTGGTTTCTCCATCTTTATTCTTCTTTCACGtgaccgggtagct cagtcggtagagcattcgcctaacaatctaagggttgtgggttcgatccc cggtcaccgccaactcagcggatgagtagcttagattgggtaatctgatc taggcggtaagttactgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaagttactgggagctgagag taggtgtggcgctccacctcagcattcgatctcccaggtctagcgcaaat agaaaaggggatagactccctcacttcCGGCttcgccgacagccaccaga tgaatatacttactttacttttttttactctACACTATTCTTGGGACAGG TCTTTGAATTCGTAAAAAATTATGTATTGTCAATGAAAAATGGCAGATTT TGAAGTGTCTGTGCCAGGATTAGGATCTTGTTTTTCACACTTTACTTCAT TATGACAGGTCTTTGAATCCGGACAGCCAAGTGTTGCCATTGAAAATAGC AACGTAAATAATGGAAGTGGCACTGCTGCATTCAAACAACATTGGAGTTT AAGTTTCTCATCAGGGATAGAGAACCGACCTTCCATCAGGTCTTTACGTG GTAGCATCCAACAAATCATTAGTTGTTCCCCTTCAAAACGTAAGAGAAAA ACTTCCGAGGCTTCTATTGTTCAAGAAAAAGTAAGTCCGTCTCTTGGTCT AGTCTCTTTGTTCTTACTTATAAATTGCCAAATCCTACATAAATTCCCAA ATCGAATTCTCATATTTTCAATATATGCTTAAAAGTAGGACAAACTAGAA AATAGCTTTCACTTTGTATGGTGGCATAAAATTATGGATACACTAATGAA TCTAGGATATCATCCAAAGTTCTACTTAATTCAAATctatatgttttatt ttttatacagAAACAGAAAACTATGCACAATGATTCAAATGATTATGGGT AttgtattttacttttttaatacTATTATGCATATTTTCAATCTTGTCAT GTGTTAACATATTTTTATACCTTTTTAATGTCGCGACGGTTCATTTGCTG GTCAAATAGCTGCCAAGGTAACTTGATATCCATACCTTATACTTTCAACC GTAGCGACCGTAGCAGGAAGGTAGAGCACCCAGCTATGGTGTGCAAGGTT ATGGGCTCGATCTCCAGCCTGgccataccaaagattctcaaaatggtact tgatgcctctctgcttgatgctcagcaactaaagagacggatcaagggta agtggagaaatccagggaaaggagtggcacCCTCCCAGACcctcgggtag acagctagagaaaaagGAGTCCTTGGGTCGTcatcgactgcggtcgcaaa cttacttatttTTAACTNGTCATGTCACGGTTCATCTGCTAGTCAAAAAA GTTGCTTTAGTAACTTGAGATCTGTACTTTTATCcgtttatttctttgtt ttcaggaCGGGGATTGGGGAGAATCAAAAGGACCAATCATATTCAAGTTG CAGAGTAATGTAAGTTAGCTTATAAAATGTATTTTCTCTATTTATAGTGG TTTTTTGTTAGataatttaatgatatttttgtactgtattttttgatttt ttgtatgtttttgtatctttttttttttacttgggAGTAATTATTATCAA GGGAATAGCTATATAGTCATATAATGAATCAAag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003576XLOC_003576Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006255-exon-sc0000066-1491911889:332034..332130TCONS_00006255-exon-sc0000066-1491911889:332034..332130Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:332034..332130TCONS_00006255-exon-sc0000066-1510915933:332034..332130Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:332034..332130TCONS_00006255-exon-sc0000066-1575043694:332034..332130Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:332358..332573TCONS_00006255-exon-sc0000066-1491911889:332358..332573Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:332358..332573TCONS_00006255-exon-sc0000066-1510915933:332358..332573Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:332358..332573TCONS_00006255-exon-sc0000066-1575043694:332358..332573Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:332785..332903TCONS_00006255-exon-sc0000066-1491911889:332785..332903Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:332785..332903TCONS_00006255-exon-sc0000066-1510915933:332785..332903Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:332785..332903TCONS_00006255-exon-sc0000066-1575043694:332785..332903Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:333086..333156TCONS_00006255-exon-sc0000066-1491911889:333086..333156Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:333086..333156TCONS_00006255-exon-sc0000066-1510915933:333086..333156Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:333086..333156TCONS_00006255-exon-sc0000066-1575043694:333086..333156Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:334030..334161TCONS_00006255-exon-sc0000066-1491911889:334030..334161Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:334030..334161TCONS_00006255-exon-sc0000066-1510915933:334030..334161Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:334030..334161TCONS_00006255-exon-sc0000066-1575043694:334030..334161Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:334704..334738TCONS_00006255-exon-sc0000066-1491911889:334704..334738Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:334704..334738TCONS_00006255-exon-sc0000066-1510915933:334704..334738Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:334704..334738TCONS_00006255-exon-sc0000066-1575043694:334704..334738Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:335054..335136TCONS_00006255-exon-sc0000066-1491911889:335054..335136Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:335054..335136TCONS_00006255-exon-sc0000066-1510915933:335054..335136Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:335054..335136TCONS_00006255-exon-sc0000066-1575043694:335054..335136Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:335727..335817TCONS_00006255-exon-sc0000066-1491911889:335727..335817Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:335727..335817TCONS_00006255-exon-sc0000066-1510915933:335727..335817Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:335727..335817TCONS_00006255-exon-sc0000066-1575043694:335727..335817Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:336093..336175TCONS_00006255-exon-sc0000066-1491911889:336093..336175Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:336093..336175TCONS_00006255-exon-sc0000066-1510915933:336093..336175Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:336093..336175TCONS_00006255-exon-sc0000066-1575043694:336093..336175Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:336431..336509TCONS_00006255-exon-sc0000066-1491911889:336431..336509Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:336431..336509TCONS_00006255-exon-sc0000066-1510915933:336431..336509Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:336431..336509TCONS_00006255-exon-sc0000066-1575043694:336431..336509Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:336846..337046TCONS_00006255-exon-sc0000066-1491911889:336846..337046Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:336846..337046TCONS_00006255-exon-sc0000066-1510915933:336846..337046Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:336846..337046TCONS_00006255-exon-sc0000066-1575043694:336846..337046Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:338042..338263TCONS_00006255-exon-sc0000066-1491911889:338042..338263Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:338042..338263TCONS_00006255-exon-sc0000066-1510915933:338042..338263Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:338042..338263TCONS_00006255-exon-sc0000066-1575043694:338042..338263Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:338494..338531TCONS_00006255-exon-sc0000066-1491911889:338494..338531Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:338494..338531TCONS_00006255-exon-sc0000066-1510915933:338494..338531Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:338494..338531TCONS_00006255-exon-sc0000066-1575043694:338494..338531Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1491911889:339039..339267TCONS_00006255-exon-sc0000066-1491911889:339039..339267Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1510915933:339039..339267TCONS_00006255-exon-sc0000066-1510915933:339039..339267Clytia hemisphaericaexon
TCONS_00006255-exon-sc0000066-1575043694:339039..339267TCONS_00006255-exon-sc0000066-1575043694:339039..339267Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:332034..339267 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
87.0525 88.0411 22.7034 14.825 25.6245 19.0459 26.5759 20.7705 24.2034 32.0926 17.0325 20.5866 15.496 14.8346 18.2273 23.0443 25.8077 28.5087 12.4506 14.5223 19.2206 19.3301 54.6081 44.6161 11.183 11.7409 26.7909 25.9667 44.1135 42.5534
Blast
BLAST of TCONS_00006255 vs. Swiss-Prot (Human)
Match: FGD6 (FYVE, RhoGEF and PH domain-containing protein 6 OS=Homo sapiens GN=FGD6 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 7.341e-26
Identity = 66/207 (31.88%), Postives = 107/207 (51.69%), Query Frame = 2
Query:  164 NIEAIYQVSAHLLELMESEGVIHALLNLAPYLKLYSLYANNFNTSNKLLEECLKNYPDFHRLVSFQETREEMQCLKLSALLVTPIQRVPRYRLLVETLLAKTPADAIDFKKLKDAYNKLNEIAIHINECVRQHENFMTMLGIQNRFSGNQRPQIIAPGRKFLKEGNLTKITTSGHVKLRKVYLFNDILLVAKCESNGLLSCREIFEL 784
            N + + ++   +L   E + +    +   PYLK+YS Y   F+ +  LL+E  K  P F  +V   E       L L   L+ P+QR+P+YRLL+   L     DA D++  +DA   + E+A H N+ ++Q +NF  ++ IQ   +G+   +I+ PGR FLKEG L K++    ++ R  +LFND LL      +G+     +  L
Sbjct:  932 NRDLLKELEERMLHWTEQQRIADIFVKKGPYLKMYSTYIKEFDKNIALLDEQCKKNPGFAAVVREFEMSPRCANLALKHYLLKPVQRIPQYRLLLTDYLKNLIEDAGDYRDTQDALAVVIEVANHANDTMKQGDNFQKLMQIQYSLNGHH--EIVQPGRVFLKEGILMKLSRKV-MQPRMFFLFNDALLYTTPVQSGMYKLNNMLSL 1135          
The following BLAST results are available for this feature:
BLAST of TCONS_00006255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGD67.341e-2631.88FYVE, RhoGEF and PH domain-containing protein 6 OS... [more]
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