TCONS_00006242 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006242
Unique NameTCONS_00006242
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1970

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006242 ID=TCONS_00006242|Name=TCONS_00006242|organism=Clytia hemisphaerica|type=transcript|length=1970bp
ggaaaaaataattaaaaaaacaacaaaagaaatgatAGAGCAATTACAGA
GACATGTTTTTTGTTGGTGTTTATTCATGGCGTGTTATCTCCACCACAAC
GCAGTCATCGGAAAAGTTTTCCCATCCATCATTTGGAGCCCCTACAACCC
ACTATTTTCATGTGAAGAACCCACATTGAATGTCCGAGTTGATGACATTG
TTAAATTCATTTGTCCATATTACGATGTTGGGTTTGTGCAACCTGAGGAC
AGCCTGGACAAACCTCTTTACGAAAACATGTACTTGGTAAAGGAAGACAG
AAACGCTTTCGATCAATGTGATGCATCAGGTTCAGGAAGTGACGAGCAAA
TATTAAAATGCGATCAATTGCCATCCAGCGCAAACTCAAACCGTCTGAGG
TTTATCAAAACTCAAACCTTTCCTGGACAAATGTATTACGAAGAAGGGAA
AAGCTACTATTTCATCGacTAACTCACTAACACAACATTACTGATATATT
TTCTGAGCTGATGGTAATTCTTTATAGCTGCAAGCATGTATTGGAAGGAA
GCATTGTTTGGTGAGGTACTGGTTATCGGACAGCTGAGAATGTGAACAAC
ACCATTGGTGGTAGTTGTAACACAACAGAAAATGAGTTTCAATACAAACT
ACGTTTGAAAGTCTACATTTGTCGTCAAGATGAAGTGTGTAGAACGTGTA
ATACTGCACAATGTTATTCGAAAgGCGTGACTTGTCCTCATTGTAACCCA
TGGAGTGAAATCGAGAAAACACCTTCTGCAGACTTCACTCAATTATCTTT
GAATGAGACTCGATGGTGTAGAGATGGAAATGACAACAAGACAGAGTTTA
AACAACGAGATTGTGATTTGCAATGTGAAGATTGGAAAGAGTTTGATGAG
GAACAAGATGAAGGCTGCATCATATTGAATGGAAATACAACAACAACACC
AAAGAAAGATAACCAACTTTGTGGAATGACTTCTAAACGTTGCCAAAGCA
ACCAATGTAACAAAGAGATCAACTTTTGTGCATTTTCTACATGTACAACC
AGCAAACCAACTACTCGTAGTCAAAGTGGCACTCCAGAAGTTGAAAAACA
AGTTGGGCCAGGTGAAGCGAAGGAGAGTAACAAATTCCTTTACATTTCCA
TTCCAATGTTTCTGGTGCTGTTTGCATTGGGTATATTGGTAGGCATATTG
GCTTTCAAGAGGTACCACCAAAAGAAATGTCTGAATTTCATCATGAGGCC
AAACCAAGTCGACGTCGGAgAAGAAAGAGGAAACGTGAATTTAGCATATC
AATCGTCAGTTATCGAGAAGCGACCAAACGCACAATCTGTTTATTATGCC
AACGAGTCGGATAGTGTTCATTGTGACACTTTTGATGAAGAATCGAAAAG
CTGATAAAGTGTTATCGTGAATGTGCAGAATTGATGTGTGCCAGATTGTT
TTCGTAACTTTTTGAAAGTTGTATAAATTAAGTCTTTAATTGACGACATT
AAATTGTCAGGTCCATCGTGTATTTCATCaatcttttggaaatttttgat
catGGAAATAATGATAGTGACTTGACTTTGGCTCTTTCggaatcttttaa
aaatatcaaccaaaatctgcataaattgAACCTTTGTTCCTTGAGATTTC
AAACTAAGACCTTTCTAAACCTCTTTTTGTAAAATACTGCTcagattgaa
ttaaaaaatatttttataactaACACAATTAACTGTaaatataatttcaa
agaaaaattgcatGTTTATTTATAATGATTcgtattttttagtttttcca
gattttagaattgcaaaatttttatgaagattcaaatgatattgaaaata
gagaagataatttttttatgaaacctACATTTTATAGAGAAAATTCTCAA
ACAGGAAATTTAATGAATAGTTATATACATAACTGGTACCTAATAATATC
ATcgatgttttaaatatttt
Run BLAST on NCBI

transcript from alignment at sc0000066:272763..283617+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006242 ID=TCONS_00006242|Name=TCONS_00006242|organism=Clytia hemisphaerica|type=transcript|length=10855bp|location=Sequence derived from alignment at sc0000066:272763..283617+ (Clytia hemisphaerica)
ggaaaaaataattaaaaaaacaacaaaagaaatgatAGAGCAATTACAGA
GACATGTTTTTTGTTGGTGTTTATTCATGGCGTGTTATCTCCACCACAAC
GCAGTCATCGGAAAAGTTTTCCCATCCATCATTTGGAGCCCCTACAACCC
ACTGTAAGTAGCTTAAAACTTTCCGAAGGTTATTCATATGTTAGCAAACT
TGAGTTTTTCtggtaatatgaaaatataatcTTGAAATATCATAAATCAG
ATCACTTTACCTcttaaaaaacttttgttcTGAAGCAAAAACTTATGCCT
CAAACTCAAAATCTTGAAGTGTGCGATTAAACATTGAAGGTTCTCTTTAC
ACTTTAAAGAAAGTCTGAGAGAACGTTCACAATATATCTTGAAACTCATC
tagtgggggggggggacgCAAGTATGCATTATTGAATATGGACTTCAAAA
AGACACGTAATAGGTTGAAATATCGcccaaagagaaaaatttcgttAGAT
ACACCTTTTGACACGTCATTCACATACGAAACATGTGATGGTGTCAATCA
AGCTGCATCTCTATAAGCATAAATGACTCCTTCAGCTCAGGCTTTTTTCC
CAACATTTCCAAGTTCGCGACAGTCACCCCAGTCTacaagaaaaattcta
aaaacgataaAAGTAACTATTGACCAATAAGTATACTGCCGGTAATAtcc
aaaatttacgaaagagTATATCACAATCAAATATCGGAATACTTTGAGCA
CTACTTTGATGAACAACAATGTGGTTTCAGGAAAGGATATTCCACTCAAA
CCTCTCTTCTCCCAATGGAAGAGATCTGGAAGCTAGCCAATgacaaaaaa
gatgtttttgggGCACTGCTCATCGACCTTTCTAAGGCCTTTGACTGCAT
GTGCCACAAATTACTTGtagcaaagatcagtgcatacGGGTTCGATGACC
TTTCCACTGGGTTAGTCAAGAGTTATCTAGAAAATAGGCAACAAAGGACA
AAAGTAGGCAACGAACTGAGTAACTGGATCAAGATCAAGGATGGTGTTCC
CCAGGGAtctgtttttcaatatttatataTGTGAcctctttttcatcatt
gaggATACTAAGGTTGCGAATTATGCGGACGATACGACACCCTATGTTAG
TGCTCCTACCTGGGTTGAAGTAAGTGGTAAACTAAGCTCTGTAGCAGAAA
AAATCTTCACATGGCTTTCGATTAATCAAATGGTTGGTAATGCTGACAAA
TGTCAGCTAATAGTTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTTCTAGATAGATTTGTAATtaatagttgatattg
attagcctcgagctaagtacacattgtactactttgcatcaactttaaag
aaaagaaacataaacaacATAAACATAatcccattgagtttcaagcccga
agggctaagggtgagactcctggatgggaaatgaaacaacttattttcca
tccagaacgtagtttttacacaaacgccggattgaaactaaaatctatcg
ctagatttcaaaaaaatgtagtcctcaaaaacaaaggaatttctaaataa
aacccgtcgtcatgattacggcgtgttctatgcgcgttttggatgggaaa
taagtggcttcaatttctcttgcctgagaagggttaaagtctcgcctcta
gtccttcgggcttgaaacatGTGATggtgttaatttttctttcattcttt
TAGATTTTCATGTGAAGAACCCACATTGAATGTCCGAGTTGATGACATTG
TTAAATTCATTTGTCCATATTACGATGTTGGGTTTGTGCAACCTGAGGAC
AGCCTGGACAAACCTCTTTACGAAAACATGTACTTGGTAAAGGAAGACAG
AAACGCTTTCGATCAATGTGATGCATCAGGTTCAGGTTTGATCCCACTTT
TAAATCTTGTAGTAGTCATTTgatcgaaaatcgaaaatctcaGTAATTCA
TGATACAtaccattacaatgtcttccacggacccaacaccGGATTGGTTG
CAATTTACGTACTGACTGATGTTACGTCACTTGCAAGCAATCAATTGTTG
GGTCTCTGATGATGTAACATCAGATGAAATTGCAATTCAATTGTGCAAAG
caagttttttggactttgtgtgagattgcttcattagttttttctgattt
ttttgcatgtaTAAAGAGGGCAAGGTTGTCGTAACCGATTTTCCTGGAAA
GTTTTTTTAGCAGTAAAAAtcgtattttcttatttggggaaattcccttt
tgtcatttttaaaggaaagtGAGCATTTCTCGCGATAGGCTTGGTTTTTA
TGATGATTTTTTAGTCTGCATTTTCTTACTTTTGttgtcacttttttctc
ttttcttatTTGCATTAgacttcaggtaggtccattcagcatgtagcttt
tCAATTCTCAGAGTGCGtcatttcatctattttgacaGTGCCTCATTTCT
CCAGCTAAACATTAATCACAGAAGCATGGAATCAGGTTGGTCAAACGTTA
CTTGACATAGGTGTATTCATTTTTTAGCGATATAATCTCCTTCATTTTTT
TAGGAAGTGACGAGCAAATATTAAAATGCGATCAATTGCCATCCAGCGCA
AACTCAAACCGTCTGAGGTTTATCAAAACTCAAACCTTTCCTGGACAAAT
GTATTACGAAGAAGGGAAAAGCTACTATTTCATCGGTAAATTATCATACC
AGTCCGATTTCACATGCTTTCCTTTCTTGACTAATCTTACTGTTgttctt
caagtattttttgataaatgtcATTGTCCTTTATCTGGCATAAGGGTATT
AAACCTTTCTCATGTCGGTTATATTAGTGTGGTTGGGTTTGTTTGTTGAC
TCCTCggttatctttttctttttattcatttcataTCTATTGGTGGTCTT
TGAGATCTTGCAAATGAGCTCATTTGcgatattttaagattttgcggGGA
CTTGTTTTCgaataaaagaattttaaaaaaaatctctgaTTATAACTTGT
TACTATAACTTATTAATAACCtcttgatttcatttttagacTAACTCACT
AACACAACATTACTGATATATTTTCTGAGCTGATGGTAATTCTTTATAGC
TGCAAGCATGTATTGGAAGGAAGCATTGTTTGGTGAGGTTAGAAGTGTAT
GATTCGTTAGATTCAATGTAGTGTCCGaattaaattgaaataattAACAA
AACTTTATTTACATCATTTAAATTACATAGTCTTTTAGCACTACACCCAA
TTCCTGAGTTTTCACCAAACCTTTGTGAAGTTAATATCAAGTAACACCTA
ATGAAAAACCATtttgagaattaatttaaacTACATAATGCACCAAAGAT
AATACCTTCAATGGTGGTAGAACCTAATATTAactttaccattttacatt
ggCGATTCAGGTACTGGTTATCGGACAGCTGAGAATGTGAACAACACCAT
TGGTGGTAGTTGTAACACAACAGAAAATGAGTTTCAATACAAACTACGTT
TGAAAGTCTACATTTGTCGTCAAGATGAAGTGTGTAGAACGTGTAATACT
GCACAATGTTATTCGAAAggtattttgttgtttttgctaCTACATGTGTC
ATTACACCATTGTCATGCATGAAAGCTCCAATTTTTTCGTACAACAAATA
ATTCAAATCACGCATATACATTATTTCATGACCAAGTGATTGGTCTCAGT
AAAGAGATGGTTTGAGAAACCCTCTGTGGCCCTGAGTATAACTTCTGTGG
TCCTGAGTAACACCTCCAAGTATTTTTGTCAAACatttttccaaagtcga
gatatcatTAACTGAAATTTCTAAATATAGATGGGTTttacacggttctt
acgttgaaattctattgttttcttactAAAGGTAAAAAACTTggatatct
cgactttggaaaatagttaagGCAAAAATATTTGAGCTTTTGTTCGGGAC
AAGGAATCCACAttccaaatatctcaaaccatttgACTATCTTTAAACAA
TATACATTAATCAACCCCAACACAACAAGGGATTGGTCTTTGTTTGCAAG
ggtcaaatgacgtcataatgttTCATAAGTATCAATGCGAGGACTTCTGA
TATGTGACGTCATTCAACCCTGGTAAACTCGAACCAAACCCTCTTTCATG
CGGGTTTTGTTGCAAGGGTTGATTGGTGTAATACTGTTaacattttgtga
aaaataattgtaCTTTGCATGAAAATCAGTAGTGTAtcaatttgtttata
ttttgatCGTTTTTCCAATTTGGATTTATAAAAGAGGCAACTGCACTTGG
CATTTTAATAAATGCTCATTTCCAAAATAGATATTGATTGGGGCATGAAT
TTTATCAATAATCAATATACCAATATACAATATGCATTCTGCAAGAAATT
ATTCAATAAACtgcaagaaaaacaaaatgataTGACAAAGATTTGACTTG
ACAGCATGATCgtactaaaaattaaaaatcattaaacattaaaaaacaat
tttttgatccAAAATGTTTTTAGAAGCCAAGGTGAGCTCATGCATGACAA
TGAACAACAGAAAGAATCGACCACAACATGAAAATACTTTGgacgaactt
ttttttaattctcacTTCTTTTAGAATGTCACTGCTCGCCTTGGGTTCGA
AATGGCTTCAATGTTACCgacgatttttcttctttatcccAAACATACCA
GCGAAGATGTAAAGCACCCAATGAAAATGCTCGCTATGAAAGTAAAACCA
TTGACAGTGTCTCGTTAAACAGTTGCACTGAATGGAAAAAGCATTCGAAT
GAAACGTGCAACTTTATGAACACGCCATCAAATATTGATTGCCCTCTACT
CTTCGTCAAAACTTGCCAATCCAGCATAGCATCTTACTCTTTTTGCAAAT
ATGTGcctgatttttcaaactgccattgCTCTGATTGGATTGCTAAAGAG
AGAAAAGTAGCGCCTGACTTCTCAGCTATTCATCAGATTTTCGAACGCAC
GTGCTCGTCATCTTATAATAACTCAACCAGAATCGAAAGTAAAGAAACAC
AAAATGCAACCATCCATTCATGCCAGGATTGGGAGAAACCGGATGATAAG
CTAGAGATGAACTCTTGTCTTTTTATCAACAATAACACACTTGCACTGAA
CAGTGCATGCGCTAGTATTGAGCTTAAAAGATGTTCATCTTCAATGCAAA
ACATCAACATATGTCGCTACATTGATAAAAAATGCCCAACTTGTACTCAA
TGGAGTAAAACTTCATACTATAACATTTCTTCTGACTTGAAAGtgaaagc
tgaaaattttctcagtaTTTGTCCAAACGGCACAATCAATGAAAAGTCTG
AAAACATAAATTGTGTCTTGGATTGTTCAAGTTGGCAAAAAGTGGAACCT
GACTCTCATTGTGATCAATATGAGAATCAAAAGCCAGattgttttgaaaa
caaacaGAAACGAAGTTGTTCGTCAGTGAATTGTCAATTCAATCTTTCCA
TTTGTAAATACATAGGCGTGACTTGTCCTCATTGTAACCCATGGAGTGAA
ATCGAGAAAACACCTTCTGCAGACTTCACTCAATTATCTTTGAATGAGAC
TCGATGGTGTAGAGATGGAAATGACAACAAGACAGAGTTTAAACAACGAG
ATTGTGATTTGCAATGTGAAGATTGGAAAGAGTTTGATGAGGAACAAGAT
GAAGGCTGCATCATATTGAATGGAAATACAACAACAACACCAAAGAAAGA
TAACCAACTTTGTGGAATGACTTCTAAACGTTGCCAAAGCAACCAATGTA
ACAAAGAGATCAACTTTTGTGCATTTTCTACATGTACAACCAGCAAACCA
ACTACTCGTAGTCAAAGTGGCACTCCAGAAGTTGAAAGTAATTCCCCTTG
CTTTAttcgtttattttattttgtctgATAAGTCTTTTTTTCTGTAGAAC
GCTTCGACGGTCATAACAATGTATTGGTAAAAAGTATAGAATCATACCAT
AAATAATAGAAGAAGCTGTATGTGTTTACACTCGACAGTTTTCATAAGGG
TCAGACATTTAATCAAACTATTGGTGGTCTGTAACTGCAAATAGCGATTG
CCGgtatcactttttgataaattataGAGTAGCTACTTGACTTTATCAAA
ACAGTGTACGAGTCCTTACTTATTATACCTTACAAAAGGCGATTCTTCTC
TTCTTTTAGAACAAGTTGGGCCAGGTGAAGCGAAGGAGAGTAACAAATTC
CTTTACATTTCCATTCCAATGTTTCTGGTGCTGTTTGCATTGGGTATATT
GGTAGGCATATTGGCTTTCAAGAGGTACCACCAAAAGAAATGTCTGAATT
TCATCATGAGGCCAAACCAAGTCGACGTCGGAggtttgaatttatttatc
gttaatgatacaattttcaaattttcttacctGTTTTGCTAAGAGACTGA
ATGTTCTGCAAATTTGCTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcaagttacaca
acatgcacacaaccatcttgaagactttgctggtcgcaaatgataatgga
aagcaaaacttaaaattcataactatgcggggaagctcattatttccccc
cgttttgctttaaactcgcttttgattggtctatgaatttgggcgattga
tttaccgccttggcggaataaacacacaaccataataaataaatTCAACA
GGGCAgcggtgtagcaattaatttcaactgggagtcctctcttctgtgcc
aagaactggcagtgttttttaaactttaaaacaatgttaaatgaagacta
gattgtttgttatggctgtgcaagttgtgacgagagtgtgcatgttgtgt
aacttgacggcagcccgctttctgaaagtctgataagagatatctataaa
TTGTTAttgccattcattccattccattatTCAGTCAAAgtgtgcgccaa
ggttagaaaaggttagaaaaacacaatctgcatccggaactgcgtgaaaa
atagtttgatcaatttcaacaagaactgtatatattaatattaatataaa
tgatcaaattccaTAGACactttgtcataattttgcaagtccaataatag
gagatgtgatgtcatcatttggttcccgtcatctgatttacggtcagcag
gtagagctggagagtcggaaagctttaccgctgctttgctggatttccac
tgtcgacctctgcacgctctgtgtttaaaagttttcaaatcgaagtagag
agccgcatgcttatggagagtaaaccgaaaacaccagtttatccacggtt
tctcaattttaaaattcggatcagtccacacgaattccctttcaacaaga
tgtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttatcacaaacacgtcca
agtccaaaaaagcacgattgcatccagtctttatatcaaatttatacagt
agctgtacttttgtaaactttatcaaattcctataacattataacaccat
aaatccccctagaggcaaacaagaaaaatatgctattattgcaaaaacta
ttaaaaagcagcaataaaaagtatcagaaaattcaacataaacaaaaact
tgagcaaacggctttaaaccttcaaaggatGTAGAAAAAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naaatcatgtgtttgatttgccgagttaaaaaaataaatgacagaaattg
aatcttgcaacagatttacactggaaatactttggtacaacactgactta
tcgacttatcacatctgaatATTGCtcgagccgccatcttgaaactacat
tatgatctgtataaacaacgcacgctaaaagtacccaaaaagttaacccg
atcggaagaaagtttagaaatcaaagtgagatcggaaaatcggatttttt
ttttgccgtcttatggtggaactggaaaattttacctatttgaatgctca
gcttaggctgaccaattagtCATCAAAAAATGGATAAATAGTACATTtga
aatttgcgattttttatGTATCTTGTAAGTcttattttcatgattttttt
cacaGAAGAAAGAGGAAACGTGAATTTAGCATATCAATCGTCAGTTATCG
AGAAGCGACCAAACGCACAATCTGTTTATTATGCCAACGAGTCGGATAGT
GTTCATTGTGACACTTTTGATGAAGAATCGAAAAGCTGATAAAGTGTTAT
CGTGAATGTGCAGAATTGATGTGTGCCAGATTGTTTTCGTAACTTTTTGA
AAGTTGTATAAATTAAGTCTTTAATTGACGACATTAAATTGTCAGGTCCA
TCGTGTATTTCATCaatcttttggaaatttttgatcatGGAAATAATGAT
AGTGACTTGACTTTGGCTCTTTCggaatcttttaaaaatatcaaccaaaa
tctgcataaattgAACCTTTGTTCCTTGAGATTTCAAACTAAGACCTTTC
TAAACCTCTTTTTGTAAAATACTGCTcagattgaattaaaaaatattttt
ataactaACACAATTAACTGTaaatataatttcaaagaaaaattgcatGT
TTATTTATAATGATTcgtattttttagtttttccagattttagaattgca
aaatttttatgaagattcaaatgatattgaaaatagagaagataattttt
ttatgaaacctACATTTTATAGAGAAAATTCTCAAACAGGAAATTTAATG
AATAGTTATATACATAACTGGTACCTAATAATATCATcgatgttttaaat
atttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003572XLOC_003572Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006242-exon-sc0000066-1491911889:272763..272915TCONS_00006242-exon-sc0000066-1491911889:272763..272915Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:272763..272915TCONS_00006242-exon-sc0000066-1510915933:272763..272915Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:272763..272915TCONS_00006242-exon-sc0000066-1575043694:272763..272915Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:275816..275997TCONS_00006242-exon-sc0000066-1491911889:275816..275997Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:275816..275997TCONS_00006242-exon-sc0000066-1510915933:275816..275997Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:275816..275997TCONS_00006242-exon-sc0000066-1575043694:275816..275997Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:276666..276797TCONS_00006242-exon-sc0000066-1491911889:276666..276797Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:276666..276797TCONS_00006242-exon-sc0000066-1510915933:276666..276797Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:276666..276797TCONS_00006242-exon-sc0000066-1575043694:276666..276797Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:277152..277249TCONS_00006242-exon-sc0000066-1491911889:277152..277249Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:277152..277249TCONS_00006242-exon-sc0000066-1510915933:277152..277249Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:277152..277249TCONS_00006242-exon-sc0000066-1575043694:277152..277249Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:277523..277681TCONS_00006242-exon-sc0000066-1491911889:277523..277681Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:277523..277681TCONS_00006242-exon-sc0000066-1510915933:277523..277681Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:277523..277681TCONS_00006242-exon-sc0000066-1575043694:277523..277681Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:279628..279999TCONS_00006242-exon-sc0000066-1491911889:279628..279999Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:279628..279999TCONS_00006242-exon-sc0000066-1510915933:279628..279999Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:279628..279999TCONS_00006242-exon-sc0000066-1575043694:279628..279999Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:280322..280495TCONS_00006242-exon-sc0000066-1491911889:280322..280495Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:280322..280495TCONS_00006242-exon-sc0000066-1510915933:280322..280495Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:280322..280495TCONS_00006242-exon-sc0000066-1575043694:280322..280495Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1491911889:282918..283617TCONS_00006242-exon-sc0000066-1491911889:282918..283617Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1510915933:282918..283617TCONS_00006242-exon-sc0000066-1510915933:282918..283617Clytia hemisphaericaexon
TCONS_00006242-exon-sc0000066-1575043694:282918..283617TCONS_00006242-exon-sc0000066-1575043694:282918..283617Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:272763..283617 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.400865	0.578346	0.1667	0	0.936872	0.448576	1.10985	1.06134	1.51082	1.24668	1.92823	0.636588	1.23075	1.35834	0.675407	0.522857	1.89428	1.90947	0.614035	1.05292	1.06042	0.391919	5.01621	2.58548	3.66527	2.43688	4.05166	4.83617	2.48411	2.18064
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006242 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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