TCONS_00006224 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006224
Unique NameTCONS_00006224
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1824

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006224 ID=TCONS_00006224|Name=TCONS_00006224|organism=Clytia hemisphaerica|type=transcript|length=1824bp
GAAACATTTTGTATGGAGTGTTCAGTTTCAGTCGCAGTTTTGGACTTGAA
ATCATCTCAGCATGTATTCTATCTTAGCACTTTTATGTTTGGTTGTTTCA
ACCCAAGCCTTCTTCGGTAAAAGACCGTACCCTGACTGGGATCAACTCAG
CGTGACCTTCCCAAATTACCATGGCATGCCACAAAACGAAGAAGAAGCAC
GAAGTCAAGGATGGAAATTTGTCAGCGATGGATGTACTTCAGCTACCAAT
TTCAAAGGCAAACGATACAGTTCACCGGATGGACCTAACAGCCTGTTGTT
TGACCCAGTTGGAAATATGGCTGGAATTCAACTTGCTTTCCCAGACAATT
CTAAGAGTCCAAAAGGATGGTCAAAAGCTTTTGTTAAAGAAGGAAAATCA
GTCGTCTTGACCGCATATTTTACTGACCCAAATTTAATCTGCTCCGGAAA
ACGAATCGCACCAAAAGGTTACGTTGGAGATAATCTTTATCTTGTGATGA
ACAATGGACCTGTCAAAATCCCATTGAAAGAATCAGATATTGGAGCCACC
AAATGGACCAAAGGAAAATGCTTCTATGGAATGGGACAACATTACTGGTA
TGATGTTTCAAAGGGTATGGATTGCCAGAATTTCGGTCCATGGTTCTTGT
TGTACAACGGTGGAAATTTGAATGCTTTTGGGTTtgcaaactttgaagat
atggTCAACAAATATGTTGAAAACCCACCGCAAAGGGCTATCCGACTTTT
CTTCCAAGAGAAGCCAGTTTGCATCGAGAAGCAACCTCATTTGACCACGC
AACACATCTATCTTCAAAGAAGACCTTATTTAAACTTTTGTTAAACTGAA
AACAGAATTCTCAGTGATAAAACAATATAGTTTCTTTTTTCTTCCATTTG
CTTCAGTATTTCACCAAAACTGTTTTAGTCACATACcaatcaaaaatgtt
gaaaaattaaatgggcttttccagaaactCCCCCcgcctgttgaggaggt
ccatttccgttccaagggggtaaggtttgatatgtggcggatttccatag
ggagataaaaagtctgtcaaaaataactggaattccatgggggggGGTAg
cctttttaaatcctactaaaattcagaattccataggagtttaaacctga
aattgcctggaattccaagggggttagagcatttccagccacagagggat
ggaccttctcaacagggggtagacggtttttttctggaaaagcccaatgt
agGATAAGTTCTGATTCTATAGTCTAACAAAACGCATACCTCTTTATACA
TGGGCAAATCTTTCACTCCAGTTTTCGCAACTAAAATCCAATGGGAATCC
AAATCTTACATTTTCTAATAATTTACATGGTTTTGGTATTGCATCAAACT
TTTCAATCATTCCCAGACCCCTGTAGATGCTCGAAAAGTTCACCACATTT
GATCTTAATGAATTTCTCAAGAGCGTTATTACAATCACCACACGATTTTG
AATAACTCGGGCACGTGCAACCACGGATGGGTAGCTTATTATAACCCCAA
CAAGAGTTAATGTCGTTAACAATTTCTAGAGTTTCTTGGCGCTTTTTATT
GTGTTGTTCCTTTATCGAGCGTACTTCCCGCACGTGCTGttctttcaaga
attttaaatGTCCTTGCAGAATATGAACTACATTTTCAGTTTCGATTTGG
TCATAGTGTGGATGGTGCCTTATATCTTGAAAACTCATCCTTGACAATGT
AATGGTACACTTATCAACAACTTTTTTTAGTTGGAATTCTTGCGCTAACA
GTAGCAGATCAACAGAACTTGATT
Run BLAST on NCBI

protein sequence of TCONS_00006224-protein

>TCONS_00006224-protein ID=TCONS_00006224-protein|Name=TCONS_00006224-protein|organism=Clytia hemisphaerica|type=polypeptide|length=260bp
MYSILALLCLVVSTQAFFGKRPYPDWDQLSVTFPNYHGMPQNEEEARSQG
WKFVSDGCTSATNFKGKRYSSPDGPNSLLFDPVGNMAGIQLAFPDNSKSP
KGWSKAFVKEGKSVVLTAYFTDPNLICSGKRIAPKGYVGDNLYLVMNNGP
VKIPLKESDIGATKWTKGKCFYGMGQHYWYDVSKGMDCQNFGPWFLLYNG
GNLNAFGFANFEDMVNKYVENPPQRAIRLFFQEKPVCIEKQPHLTTQHIY
LQRRPYLNFC
Run BLAST on NCBI

transcript from alignment at sc0000066:204296..209910+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006224 ID=TCONS_00006224|Name=TCONS_00006224|organism=Clytia hemisphaerica|type=transcript|length=5615bp|location=Sequence derived from alignment at sc0000066:204296..209910+ (Clytia hemisphaerica)
GAAACATTTTGTATGGAGTGTTCAGTTTCAGTCGCAGTTTTGGACTTGAA ATCATCTCAGCATGTATTCTATCTTAGCACTTTTATGTTTGGTTGTTTCA ACCCAAGCCTTCTTCGGTAAAAGACGTAAGATCACACCGCAATTTTTTTA CTCTAAAATTTAGCTTTTCTTTGGTGGGAAGAAGGCCTGATTCTCGaatt tgtccgaaaacgaaattCGGGAGCGTTTGGCTTTTGTTGTGGAGTGTCAT CTTTCCTATTTAGAAGCCAGATATTCCAATCTTCCTCCAGGCGCACCAAA TTGGCAATTGGTTTGCGGTACTAAAGTGATCTTTTTATTCAAAGTCTAGA GGAGTTGAGACCTCGTAGCAATCTTCCATCAACTTATATTATTTCTTTCT AATTATTTTAGCGTACCCTGACTGGGATCAACTCAGCGGTaagttttata tttataaatttaCAAAAGGAGAAAAATAGTTCCATTTCTTTAGCTATTAG TAAATGATATAAGAAAAAATCGAATTCGTTTGGAGATGTCAGTACCTTAA CCGATAGGGAAGTTTCAAACATTACTGATCGATGTCTTTTCTATTCAGTG ACCTTCCCAAATTACCATGGCATGCCACAAAACGAAGAAGAAGCACGAAG TCAAGGATGGAAATTTGTCAGCGATGGATGTACTTCAGGTTTGTTTCCTT GTTAAAATATATCTATCTAACTTTAAAACAAATACAGACCAACATAGCTT CAACACAATCTGAGTACAAAAAAGTACTTTACCCAGCCCTCTTTCAAAAT TGCTGGTTTTTTACAGCAAAGAGTACTTCGAGGACCTCGCTTTTAGACCT CTGTTTCAGAAAAGAATTTGTTAAAATCTGGAATAAAGATGATTAAAAGT CGATAAATCGTGTAAGTTTCTTGTCCATGAATTTCTCGAAAGACCTATTC TCATGTTTATCATTCCGAAATGCAAAAATGCCAAATATACCTTATTCGCG TTCCCGGGAAAGCTTCCCCTGCTTATGTAACCTTCGCTTTCTCATGCAGC TACCAATTTCAAAGGCAAACGATACAGTTCACCGGATGGACCTAACAGCC TGTTGTTTGACCCAGTTGGAAATATGGCTGGAATTCAACTTGCTGTAAGT AATTACAATTCTGGTAAACTCAGTGGTTGATGAATTGAATGTTggtttta aagtattttttgggGAGAAGGAGGAATAGactttatcggagtttttgatt tttctaaaaaagcgatgcattgtgggattgtttcgagtgtaataaaatag aaatctcttaggaattcatCGAgtgaattctattgtaatacactcgaaac aatcccacaatgcatcgcttttttagaaaaatcaaaaactccgataaggt ctattgataTCTATAAATGGAGAAAATGAATTAAACACGTTATCTTCTTT GATGAATCATACAAACACTTAACACCCGGTAAGAATTTTTCTGCCAGTGA GGGTGaaataatggactgaaactcgatggggattgttATTCCCATGTTAT TTATGGCAGGGTacttgaattccattgtttttaagtcagaaaattcagtg atgatggaaaaatagcacaatatttttcaaagaggatttctctttatttt gattattttcagtggggacaaaattggagtacaattttctacttgggacg atattttgaccgattttttccagtgggaaggggtttCACCGGGTTAGTGA GAAAGGAGTGTAATCAAGGAGAAAAGAAATCTAAGATAGAGCAGACAACA TATTTCAAGACCATAATTTAAGCTCGTCCcaagcaataaaaaataaactg aTTCTTACCAGAAGGTCCTATACATGTACCATGTACCAAATAATAGCATC AAAACATACTTTATTTTAGTTCCCAGACAATTCTAAGAGTCCAAAAGGAT GGTCAAAAGCTTTTGTTAAAGAAGGAAAATCAGTCGTCTTGACCGCATAT TTTACTGACCCAAATTTAATCTGCTCCGGAAAACGAATCGCACCAAAAGG TTACGTTGGAGATAATCTTTATCTTGTGATGAACAATGGACCTGTCAAAA TCCCATTGAAAGAATCAGATATTGGAGCCACCAAATGGACCAAAGGAAAA TGCTTCTATGGAATGGGTAAGAATATTTGTATTCTCTATACAAAACATTC ATACACAAAAACCAATACTACGATAACTTTACGGACAAATCTTTCTTGGG AAAAAACTTTGCAATTCATGGTCAAGATAACGTCTCAATTTCCAACACCT TAATATCTGCAATGGTATaaatctttttggaaatttcgtAATTTTACCGA TTCGGGGCCATAATCGCGACAGACACCGGAGAAAAGGACAAAGATCTTCA GGTATAAAGTGAATAACGGAGGGTTGaactttaaaacttgaaagttctCA AAGTAGACAACAACCGTTTTTTTCTTAGGACAACATTACTGGTATGATGT TTCAAAGGGTATGGATTGCCAGAATTTCGGTCCATGGTTCTTGTTGTACA ACGGTGGAAATTTGAATGCTTTTGGGTTtgcaaactttgaagatatggTC AACAAATATGTTGAAAACCCACCGCAAAGGGCTATCCGAGTAAGTATAAA CCGATTGATGGAAGCTAGAAAGGGTCAGAATTTAGAACCAGAGgggaaat acaccttttcgaccgtagccgccaattgttgcgcgggcatttttttgtcc gttttaccaccctaaaaccatcccagtctttttttcgcacctaaagacaa tagaaaaaagtgtaaaaaaaggattggatcgagtttagggtggtaaatta aataataaaatggaacgcgcctgaccgcgcgactacggtcgaaaaggtgt attatataTTTGATTCCACATCAGATTTCATCGCAtgatctgtcaatcaa agtcGAACAAATAGCTATTCAAGTTGATCGAATATGAATCACTGGAATCA AATCgactttttacgtttttcggaTTGCGATTCAATTGAATTTGCCCAAT CGAATCAGTTTAATTGAATTTCAATTACCGATCAAAGTCATATTCGCTCC AATTATTCCCCAGATTTGGGCGGTAAGAGCTAAGATTCAATCTTGAATTT GTACCTTATAAAATTTAAAGTGTCACCATATGCTCTTCATACAGACAATC TGAATAACCTTTATTCaagcaaagaaaatagtaaatgTTTTCGTATGTCC AAATCAAGGCCAATCCGTAAAACAGAattcatccgccaaattaaattccc actaaatttagtttttcaagttaaccgccaaattaaattcccactaaatt tagtttttcaagttaaccgccaaaataaattcccactaaatttagttttt caagttaaccgccaaaataaattcccactaaatttagtttttcatgttaa ccgccaaattaaattccctctgaaaaaactttttcggtcaTCCACCAAAt aaaattcccgccaaaatttcttccttaagGTAATTGAAAGATTTTCCATA ACATCGTAACGGAATTTTTAGCAGGGAGAAGCCTTTCTACATGACCATGT GAATAAGATGACAAGAAAGGCGATGCGATGAGTCAATAAGGCTATGGCTA CTGATCTAACACTATTTATTTCGTTTTAGCTTTTCTTCCAAGAGAAGCCA GTTTGCATCGAGAAGCAACCTCATTTGACCACGCAACACATCTATCTTCA AAGAAGACCTTATTTAAACTTTTGTTAAACTGAAAACAGAATTCTCAGTG ATAAAACAATATAGTTTCTTTTTTCTTCCATTTGCTTCAGTATTTCACCA AAACTGTTTTAGTCACATACcaatcaaaaatgttgaaaaattaaatgggc ttttccagaaactCCCCCcgcctgttgaggaggtccatttccgttccaag ggggtaaggtttgatatgtggcggatttccatagggagataaaaagtctg tcaaaaataactggaattccatgggggggGGTAgcctttttaaatcctac taaaattcagaattccataggagtttaaacctgaaattgcctggaattcc aagggggttagagcatttccagccacagagggatggaccttctcaacagg gggtagacggtttttttctggaaaagcccaatgtagGATAAGTTCTGATT CTATAGTCNGtttttcaagttaaccgccaaaataaattcccactaaattt agtttttcaagttaaccgccaaaataaattcccactaaatttagtttttc atgttaaccgccaaattaaattccctctgaaaaaactttttcggtcaTCC ACCAAAtaaaattcccgccaaaatttcttccttaagGTAATTGAAAGATT TTCCATAACATCGTAACGGAATTTTTAGCAGGGAGAAGCCTTTCTACATG ACCATGTGAATAAGATGACAAGAAAGGCGATGCGATGAGTCAATAAGGCT ATGGCTACTGATCTAACACTATTTATTTCGTTTTAGCTTTTCTTCCAAGA GAAGCCAGTTTGCATCGAGAAGCAACCTCATTTGACCACGCAACACATCT ATCTTCAAAGAAGACCTTATTTAAACTTTTGTTAAACTGAAAACAGAATT CTCAGTGATAAAACAATATAGTTTCTTTTTTCTTCCATTTGCTTCAGTAT TTCACCAAAACTGTTTTAGTCACATACcaatcaaaaatgttgaaaaatta aatgggcttttccagaaactCCCCCcgcctgttgaggaggtccatttccg ttccaagggggtaaggtttgatatgtggcggatttccatagggagataaa aagtctgtcaaaaataactggaattccatgggggggGGTAgcctttttaa atcctactaaaattcagaattccataggagtttaaacctgaaattgcctg gaattccaagggggttagagcatttccagccacagagggatggaccttct caacagggggtagacggtttttttctggaaaagcccaatgtagGATAAGT TCTGATTCTATAGTCTAACAAAACGCATACCTCTTTATACATGGGCAAAT CTTTCACTCCAGTTTTCGCAACTAAAATCCAATGGGAATCCAAATCTTAC ATTTTCTAATAATTTACATGGTTTTGGTATTGCATCAAACTTTTCAATCA TTCCCAGACCCCTGTAGATGCTCGAAAAGTTCACCACATTTGATCTTAAT GAATTTCTCAAGAGCGTTATTACAATCACCACACGATTTTGAATAACTCG GGCACGTGCAACCACGGATGGGTAGCTTATTATAACCCCAACAAGAGTTA ATGTCGTTAACAATTTCTAGAGTTTCTTGGCGCTTTTTATTGTGTTGTTC CTTTATCGAGCGTACTTCCCGCACGTGCTGttctttcaagaattttaaat GTCCTTGCAGAATATGAACTACATTTTCAGTTTCGATTTGGTCATAGTGT GGATGGTGCCTTATATCTTGAAAACTCATCCTTGACAATGTAATGGTACA CTTATCAACAACTTTTTTTAGTTGGAATTCTTGCGCTAACAGTAGCAGAT CAACAGAACTTGATT

Coding sequence (CDS) from alignment at sc0000066:204296..209910+

>TCONS_00006224 ID=TCONS_00006224|Name=TCONS_00006224|organism=Clytia hemisphaerica|type=CDS|length=5481bp|location=Sequence derived from alignment at sc0000066:204296..209910+ (Clytia hemisphaerica)
ATGTATTCTATCTTAGCACTTTTATGTTTGGTTGTTTCAACCCAAGCCTT
CTTCGGTAAAAGACCGTACCCTGACTGGGATCAACTCAGCGTGACCTTCC
CAAATTACCATGGCATGCCACAAAACGAAGAAGAAGCACGAAGTCAAGGA
TGGAAATTTGTCAGCGATGGATGTACTTCAGCTACCAATTTCAAAGGCAA
ACGATACAGTTCACCGGATGGACCTAACAGCCTGTTGTTTGACCCAGTTG
GAAATATGGCTGGAATTCAACTTGCTTTCCCAGACAATTCTAAGAGTCCA
AAAGGATGGTCAAAAGCTTTTGTTAAAGAAGGAAAATCAGTCGTCTTGAC
CGCATATTTTACTGACCCAAATTTAATCTGCTCCGGAAAACGAATCGCAC
CAAAAGGTTACGTTGGAGATAATCTTTATCTTGTGATGAACAATGGACCT
GTCAAAATCCCATTGAAAGAATCAGATATTGGAGCCACCAAATGGACCAA
AGGAAAATGCTTCTATGGAATGGGACAACATTACTGGTATGATGTTTCAA
AGGGTATGGATTGCCAGAATTTCGGTCCATGGTTCTTGTTGTACAACGGT
GGAAATTTGAATGCTTTTGGGTTtgcaaactttgaagatatggTCAACAA
ATATGTTGAAAACCCACCGCAAAGGGCTATCCGACTTTTCTTCCAAGAGA
AGCCAGTTTGCATCGAGAAGCAACCTCATTTGACCACGCAACACATCTAT
CTTCAAAGAAGACCTTATTTAAACTTTTGTTAAATGTATTCTATCTTAGC
ACTTTTATGTTTGGTTGTTTCAACCCAAGCCTTCTTCGGTAAAAGACCGT
ACCCTGACTGGGATCAACTCAGCGTGACCTTCCCAAATTACCATGGCATG
CCACAAAACGAAGAAGAAGCACGAAGTCAAGGATGGAAATTTGTCAGCGA
TGGATGTACTTCAGCTACCAATTTCAAAGGCAAACGATACAGTTCACCGG
ATGGACCTAACAGCCTGTTGTTTGACCCAGTTGGAAATATGGCTGGAATT
CAACTTGCTTTCCCAGACAATTCTAAGAGTCCAAAAGGATGGTCAAAAGC
TTTTGTTAAAGAAGGAAAATCAGTCGTCTTGACCGCATATTTTACTGACC
CAAATTTAATCTGCTCCGGAAAACGAATCGCACCAAAAGGTTACGTTGGA
GATAATCTTTATCTTGTGATGAACAATGGACCTGTCAAAATCCCATTGAA
AGAATCAGATATTGGAGCCACCAAATGGACCAAAGGAAAATGCTTCTATG
GAATGGGACAACATTACTGGTATGATGTTTCAAAGGGTATGGATTGCCAG
AATTTCGGTCCATGGTTCTTGTTGTACAACGGTGGAAATTTGAATGCTTT
TGGGTTtgcaaactttgaagatatggTCAACAAATATGTTGAAAACCCAC
CGCAAAGGGCTATCCGACTTTTCTTCCAAGAGAAGCCAGTTTGCATCGAG
AAGCAACCTCATTTGACCACGCAACACATCTATCTTCAAAGAAGACCTTA
TTTAAACTTTTGTTAAATGTATTCTATCTTAGCACTTTTATGTTTGGTTG
TTTCAACCCAAGCCTTCTTCGGTAAAAGACCGTACCCTGACTGGGATCAA
CTCAGCGTGACCTTCCCAAATTACCATGGCATGCCACAAAACGAAGAAGA
AGCACGAAGTCAAGGATGGAAATTTGTCAGCGATGGATGTACTTCAGCTA
CCAATTTCAAAGGCAAACGATACAGTTCACCGGATGGACCTAACAGCCTG
TTGTTTGACCCAGTTGGAAATATGGCTGGAATTCAACTTGCTTTCCCAGA
CAATTCTAAGAGTCCAAAAGGATGGTCAAAAGCTTTTGTTAAAGAAGGAA
AATCAGTCGTCTTGACCGCATATTTTACTGACCCAAATTTAATCTGCTCC
GGAAAACGAATCGCACCAAAAGGTTACGTTGGAGATAATCTTTATCTTGT
GATGAACAATGGACCTGTCAAAATCCCATTGAAAGAATCAGATATTGGAG
CCACCAAATGGACCAAAGGAAAATGCTTCTATGGAATGGGACAACATTAC
TGGTATGATGTTTCAAAGGGTATGGATTGCCAGAATTTCGGTCCATGGTT
CTTGTTGTACAACGGTGGAAATTTGAATGCTTTTGGGTTtgcaaactttg
aagatatggTCAACAAATATGTTGAAAACCCACCGCAAAGGGCTATCCGA
CTTTTCTTCCAAGAGAAGCCAGTTTGCATCGAGAAGCAACCTCATTTGAC
CACGCAACACATCTATCTTCAAAGAAGACCTTATTTAAACTTTTGTTAAA
TGTATTCTATCTTAGCACTTTTATGTTTGGTTGTTTCAACCCAAGCCTTC
TTCGGTAAAAGACCGTACCCTGACTGGGATCAACTCAGCGTGACCTTCCC
AAATTACCATGGCATGCCACAAAACGAAGAAGAAGCACGAAGTCAAGGAT
GGAAATTTGTCAGCGATGGATGTACTTCAGCTACCAATTTCAAAGGCAAA
CGATACAGTTCACCGGATGGACCTAACAGCCTGTTGTTTGACCCAGTTGG
AAATATGGCTGGAATTCAACTTGCTTTCCCAGACAATTCTAAGAGTCCAA
AAGGATGGTCAAAAGCTTTTGTTAAAGAAGGAAAATCAGTCGTCTTGACC
GCATATTTTACTGACCCAAATTTAATCTGCTCCGGAAAACGAATCGCACC
AAAAGGTTACGTTGGAGATAATCTTTATCTTGTGATGAACAATGGACCTG
TCAAAATCCCATTGAAAGAATCAGATATTGGAGCCACCAAATGGACCAAA
GGAAAATGCTTCTATGGAATGGGACAACATTACTGGTATGATGTTTCAAA
GGGTATGGATTGCCAGAATTTCGGTCCATGGTTCTTGTTGTACAACGGTG
GAAATTTGAATGCTTTTGGGTTtgcaaactttgaagatatggTCAACAAA
TATGTTGAAAACCCACCGCAAAGGGCTATCCGACTTTTCTTCCAAGAGAA
GCCAGTTTGCATCGAGAAGCAACCTCATTTGACCACGCAACACATCTATC
TTCAAAGAAGACCTTATTTAAACTTTTGTTAAATGTATTCTATCTTAGCA
CTTTTATGTTTGGTTGTTTCAACCCAAGCCTTCTTCGGTAAAAGACCGTA
CCCTGACTGGGATCAACTCAGCGTGACCTTCCCAAATTACCATGGCATGC
CACAAAACGAAGAAGAAGCACGAAGTCAAGGATGGAAATTTGTCAGCGAT
GGATGTACTTCAGCTACCAATTTCAAAGGCAAACGATACAGTTCACCGGA
TGGACCTAACAGCCTGTTGTTTGACCCAGTTGGAAATATGGCTGGAATTC
AACTTGCTTTCCCAGACAATTCTAAGAGTCCAAAAGGATGGTCAAAAGCT
TTTGTTAAAGAAGGAAAATCAGTCGTCTTGACCGCATATTTTACTGACCC
AAATTTAATCTGCTCCGGAAAACGAATCGCACCAAAAGGTTACGTTGGAG
ATAATCTTTATCTTGTGATGAACAATGGACCTGTCAAAATCCCATTGAAA
GAATCAGATATTGGAGCCACCAAATGGACCAAAGGAAAATGCTTCTATGG
AATGGGACAACATTACTGGTATGATGTTTCAAAGGGTATGGATTGCCAGA
ATTTCGGTCCATGGTTCTTGTTGTACAACGGTGGAAATTTGAATGCTTTT
GGGTTtgcaaactttgaagatatggTCAACAAATATGTTGAAAACCCACC
GCAAAGGGCTATCCGACTTTTCTTCCAAGAGAAGCCAGTTTGCATCGAGA
AGCAACCTCATTTGACCACGCAACACATCTATCTTCAAAGAAGACCTTAT
TTAAACTTTTGTTAAATGTATTCTATCTTAGCACTTTTATGTTTGGTTGT
TTCAACCCAAGCCTTCTTCGGTAAAAGACCGTACCCTGACTGGGATCAAC
TCAGCGTGACCTTCCCAAATTACCATGGCATGCCACAAAACGAAGAAGAA
GCACGAAGTCAAGGATGGAAATTTGTCAGCGATGGATGTACTTCAGCTAC
CAATTTCAAAGGCAAACGATACAGTTCACCGGATGGACCTAACAGCCTGT
TGTTTGACCCAGTTGGAAATATGGCTGGAATTCAACTTGCTTTCCCAGAC
AATTCTAAGAGTCCAAAAGGATGGTCAAAAGCTTTTGTTAAAGAAGGAAA
ATCAGTCGTCTTGACCGCATATTTTACTGACCCAAATTTAATCTGCTCCG
GAAAACGAATCGCACCAAAAGGTTACGTTGGAGATAATCTTTATCTTGTG
ATGAACAATGGACCTGTCAAAATCCCATTGAAAGAATCAGATATTGGAGC
CACCAAATGGACCAAAGGAAAATGCTTCTATGGAATGGGACAACATTACT
GGTATGATGTTTCAAAGGGTATGGATTGCCAGAATTTCGGTCCATGGTTC
TTGTTGTACAACGGTGGAAATTTGAATGCTTTTGGGTTtgcaaactttga
agatatggTCAACAAATATGTTGAAAACCCACCGCAAAGGGCTATCCGAC
TTTTCTTCCAAGAGAAGCCAGTTTGCATCGAGAAGCAACCTCATTTGACC
ACGCAACACATCTATCTTCAAAGAAGACCTTATTTAAACTTTTGTTAAAT
GTATTCTATCTTAGCACTTTTATGTTTGGTTGTTTCAACCCAAGCCTTCT
TCGGTAAAAGACCGTACCCTGACTGGGATCAACTCAGCGTGACCTTCCCA
AATTACCATGGCATGCCACAAAACGAAGAAGAAGCACGAAGTCAAGGATG
GAAATTTGTCAGCGATGGATGTACTTCAGCTACCAATTTCAAAGGCAAAC
GATACAGTTCACCGGATGGACCTAACAGCCTGTTGTTTGACCCAGTTGGA
AATATGGCTGGAATTCAACTTGCTTTCCCAGACAATTCTAAGAGTCCAAA
AGGATGGTCAAAAGCTTTTGTTAAAGAAGGAAAATCAGTCGTCTTGACCG
CATATTTTACTGACCCAAATTTAATCTGCTCCGGAAAACGAATCGCACCA
AAAGGTTACGTTGGAGATAATCTTTATCTTGTGATGAACAATGGACCTGT
CAAAATCCCATTGAAAGAATCAGATATTGGAGCCACCAAATGGACCAAAG
GAAAATGCTTCTATGGAATGGGACAACATTACTGGTATGATGTTTCAAAG
GGTATGGATTGCCAGAATTTCGGTCCATGGTTCTTGTTGTACAACGGTGG
AAATTTGAATGCTTTTGGGTTtgcaaactttgaagatatggTCAACAAAT
ATGTTGAAAACCCACCGCAAAGGGCTATCCGACTTTTCTTCCAAGAGAAG
CCAGTTTGCATCGAGAAGCAACCTCATTTGACCACGCAACACATCTATCT
TCAAAGAAGACCTTATTTAAACTTTTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003569XLOC_003569Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006224-proteinTCONS_00006224-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006224-exon-sc0000066-1491911889:204296..204420TCONS_00006224-exon-sc0000066-1491911889:204296..204420Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:204296..204420TCONS_00006224-exon-sc0000066-1510915933:204296..204420Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:204296..204420TCONS_00006224-exon-sc0000066-1575043694:204296..204420Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:204707..204733TCONS_00006224-exon-sc0000066-1491911889:204707..204733Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:204707..204733TCONS_00006224-exon-sc0000066-1510915933:204707..204733Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:204707..204733TCONS_00006224-exon-sc0000066-1575043694:204707..204733Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:204894..204983TCONS_00006224-exon-sc0000066-1491911889:204894..204983Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:204894..204983TCONS_00006224-exon-sc0000066-1510915933:204894..204983Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:204894..204983TCONS_00006224-exon-sc0000066-1575043694:204894..204983Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:205345..205439TCONS_00006224-exon-sc0000066-1491911889:205345..205439Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:205345..205439TCONS_00006224-exon-sc0000066-1510915933:205345..205439Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:205345..205439TCONS_00006224-exon-sc0000066-1575043694:205345..205439Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:206215..206461TCONS_00006224-exon-sc0000066-1491911889:206215..206461Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:206215..206461TCONS_00006224-exon-sc0000066-1510915933:206215..206461Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:206215..206461TCONS_00006224-exon-sc0000066-1575043694:206215..206461Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:206774..206934TCONS_00006224-exon-sc0000066-1491911889:206774..206934Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:206774..206934TCONS_00006224-exon-sc0000066-1510915933:206774..206934Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:206774..206934TCONS_00006224-exon-sc0000066-1575043694:206774..206934Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1491911889:208832..209910TCONS_00006224-exon-sc0000066-1491911889:208832..209910Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1510915933:208832..209910TCONS_00006224-exon-sc0000066-1510915933:208832..209910Clytia hemisphaericaexon
TCONS_00006224-exon-sc0000066-1575043694:208832..209910TCONS_00006224-exon-sc0000066-1575043694:208832..209910Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:204296..209910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.5494 11.9606 4.96583 4.66116 3.03002 2.79477 3.30059 5.11194 3.7481 2.27017 2.05739 2.4711 16.6257 19.487 6.41381 8.18772 6.09993 6.06165 41.7319 29.8047 8.69655 7.65582 16.3165 15.5536 2.96367 5.82154 2.5797 2.01472 4.20384 5.01691
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006224 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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