TCONS_00006145 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006145
Unique NameTCONS_00006145
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006145 ID=TCONS_00006145|Name=TCONS_00006145|organism=Clytia hemisphaerica|type=transcript|length=3178bp
TTCAAAGACGGTCAAGCTGTTGATGAAGAAGTTGGTATAGATCATGAATA
CGATGCCTTGTTATGGACCGCACCAGAGCATTTGGACAATATGAAAGAAG
AACGATCAAAAGAAGGCGATGTTTACAGCTATGGAATTATCTTACAAGAA
ATCATAACCAGAGGATCTCCATATTCGATGTATGAAAACTTGTCTGCTAA
AGAAATCCTTGACCGCGTGAAGAAATGTTCAAACCCTCGATTCCGGCCGG
TCGTACCGGAAGATTACGGACATCCCGAGTATCATGATCTGATGAGTCAG
TGTTGGGAAGAAGCTCCTACGTCACGGCCTCGTTTTgatgaaatcatgaa
agctcTGAAGAAACTAAACGGGGGAAAGAACATTAACATTGTGGATAATA
TGATCAAAATGATGGAGAAATACACAGACCATTTGGAAGAGTTGGTTGCA
GAACGAACAAAACAACTGGAGGATGAGAAAGCCAAGACAGATGAATTACT
TTACCGAATGTTACCAAGAACCGTAGCAGAACAGCTGAAACATGGAGAAG
CAGTGAGCGCTGAGACGTTCGATATGGTGACAATCTTTTTCAGTGACATT
GTTGGGTTCACCAAACTGGCTGCCGAATCCACTCCAATGCAGGTTGTTGA
TTTGTTGAACGATTTATACACGTGTTTTGATCAGATTGTCGACCAGCATC
ATGTTTATAAGGTAGAAACGATTGGAGACGCATACATGGTGGTGAGCGGT
CTCCCCGAACGAAATGGAAATCGACACGCGGGTGAAATCGCACGCATGTC
TCTCGACCTGTTGAGTGCAACAACCACTTTCGTTGTGAGACATAAGAAAG
AGTATCGCATACAGCTAAGGATTGGCATTCACTCAGGTTCATGTGTTGCT
GGAGTTGTTGGCTTAAAAATGCCGCGTTATTGCTTGTTTGGTGATACTGT
GAACTATGCAAGTCGTATGGAGTCTAGTGGACTGGCATTAAGAATTCACG
TCAGTCCAGAATGCCATGAGGTTTTGACTGAACTTGGTGGCTACCATCTT
ATCGAGCGTGGTCCTGTCTCTATGAAGggcAAAGGGACCATAGTGACCTA
CTTCTTAGCTGGTTATGACGGTTTCGACAAAACCTTACCTGATCTTCAAT
TCGCTGCTGGTTTAGAAGAACACTCCTTCAAGTAACACGCCGCGTGTACG
CCGAACAGATCTAGAATACAAGGCTAGCGAAAGGAGAAGTGGAGGAGAGC
CTGACGTTCTAATCTATAATGGGTTATGGAAAAAGTAAACAAGCTCTTAT
GCTTTGAGCAGCAAACATTATTGAAAACAAAGGTTAAACTATGGACGTTT
TACATGTTTTGTTGAGTtatgaatccgccattatggaaggaaacgttcga
tttgcgtaaagGATCGTCTCTGCAGATTCGAATGTtatttgcttccataa
tggcggtaaacataaacaaaaaaacctCCATACCCCACATGAGGTTGTTA
TTCTTTTGTGTGAAGATAAACAACGACTCGCCGTGTCTCATAGCTGGCAC
ACAAAGtcatttcaacgttcatctaacgttatatggacgttgcgaacgtt
agatgaacgttgaaacaacgttgtgtgccagctgagcTATTTCAAATGAA
AGAACTTTTCGATAACAACATAAAACAGACGTTGTATGGCtgattttaaa
acaattttatcaACGCAACAAACGTTTATGTCATAAATGTACGAGAGTAA
AGAAACGTGAAGagaaaaaacattcaaattcaGATActttaaaagacaat
gaaaaacAATGGGTGAGCGTAAAACAACACCATCTATTGTTGCTTACTGG
TGTCCCAAGGCAAGGATGAACAGAGTAATATTTCTGCGCTCTCTGATGTT
GGATTTCCGAATTATAAGATTGAGAAATTTCAacctacagttgactctct
ctaattcgaactcaaacgagaaatcttatttgttcgaaataCAGAGGGAT
TCAAATTAGAGTCTTTTAAGAGGGTTTTTACTTGACGGAGACTGAAAAAT
ATTcgaagattcgaataatagaagttcgaataagagagaATTTACTGTAA
TTTACTATTTAAATACATACTTAAAATATCTGAATCCATTCGATAATTTT
TGAACACTTATTTCGAATTGGCCTTTTAGTCCAATGGATCTATGTATGTC
AAATTTGTTATCTAATTTTACAGGTTTCAACTCGTTCTTCAGTGAACTCC
TTCTAACTCGAACTTTTaccattcgaatctttctataattcaaactaaAT
TTTCGGTCACCCTAAGCTGTTAAGTAATATAAAATAGTCTctgtaatttg
aatttttctctaattcgaagagaAGTTTTGGTCTCGTGacgatcgaatta
gagagagtcaactgagAGAGTTGGTCTTTACAGAAAATCTTCATCgattt
acagaaagattcgaattacagggaGTATTTTATGCTAAAGGacccaatat
tttagttcgaattacaataAGATTTTGGATTTGCAaagtttcgaattaga
gagattattttgataaaaatcacGTACTTAGGAATCTTCGATTACAAATT
GACTCATGGATAGTTAAACAAATACTTGATGGATaggacacccctgtgtc
acagacccgatgGAACCCTCCCCCCCCCACTGGAAGAATTGGTCAAAAAA
TCGCCTTACTGTAATATATATACCctaaatttcaaccccactgagGAATT
ATACCctgattttattttaaattacaCTCCCACTGGCTTTTCTGAGCTTA
AAGACAAAAAACTTcttccccattgggatttctaGAAAAATTGCCATCCC
ACGGagagaaaaagttccaccggtgCTGTGAGACAGGGGGTGTGTTTTAG
GCAAGTGTTTCTAAAAAGCTGTATTATAAAGCCAAAACACAGATactgta
ttacttcgaataaaagcCCCGGAcgttttttagatatttttgatatttgg
agAGGCATTTATTCAAGGGGCGTTTGAAGGAAGGGGGCCTTTGTTCGAAG
TAATATGGTAATTAACTCTAACAAGATGTGTCCTGTAAATATATTATGTA
AATGATAACTTGTAATTATGAAACATATTTTTAGTACAATCATATAGTGA
TGCCAAAGTAAAAAACCAAATAAACAAC
Run BLAST on NCBI

transcript from alignment at sc0000063:183126..198153-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006145 ID=TCONS_00006145|Name=TCONS_00006145|organism=Clytia hemisphaerica|type=transcript|length=15028bp|location=Sequence derived from alignment at sc0000063:183126..198153- (Clytia hemisphaerica)
TTCAAAGACGGTCAAGCTGTTGATGAAGAAGTTGGTATAGATCATGAATA
CGATGGTAAGTTTTCGGTCAAAACTCTGTTATTTTTGATTGGTTAAACGA
GGCAAGGGTGACTTTTTTCATATAAAAGCATTTCGAACGAGACAGGGTAA
TAGAGTCAAGGCTTGTATTTGAATTCAAAGACGGTCAAGCTGTTGATGAA
ATAAGTCGGAATTGAATACGATGGTAAGGTTTCGGTCAAATCTCTGTTAT
TTTTGATTGGTTAATCGAAGCAAAGGATGACTTTTTTTCATATAAAAGCA
TGTCGAACGAGACAGGGTAATAGAGTCAAGGGTTGTTTTTAAGTTCAAAG
ACGGTCAAGCTGTTAAATAAGTCGGAATTGAATATGATTGTAAGTTTGAT
GTCAAAACTCTGTTATACTTGTTTCGCTAATCGAGGCAAATAGAGTGCCT
AAAAACACAAAAGCCTCTAAAAGTAAGCATAGGTCAAAGGTTAACCCGGG
GTCCACTTAAGGCTTTTTTTTATAGACTGACCGGCACGATTTAGCGGCCC
GGTAGTACATGGTAATATTGCTTTTGCTTAGGTGGACTGTAAAACAATCC
GCTAGATTTTAGTTGTAAAAAATGGATGAGGCAATAATGTTTTTATTATC
AAATATTATAGATCTGTTATTCATGTTTGCTCCCGAATCTTAATTATATT
TTTCAACTCCAAGTAGTTTTTTTGCTATCTGGAATTTTTGTGCTTTTCTT
TCAAAATGGCGACCTCGTCAAATGCGTCTGGTCTAGTCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCCCCCCCCCCCAAGCAGTTTGCGTGATAACGTGAT
AGGAACTTCTTTGTAGCGTGATTACGTAATTTTGATTTTTTTTTTCCTGA
TTGTGTGACCAGGGGTCAAAACGTGATCGTTATTTCAAAAGATTTTGAGC
CGTGATTTGGACTTTTTCAAAGGGGAACGTGATTATACAATTTTTTTGCT
GATTTGCGTGACCGTGATTGAAGACAAAAATTTGCGTGATATCATGATCA
TAGTTAGCCTCATTTAGTACTCAATCATTGGGCTCTTCCAGAAAATGTAC
ATGGGGGGGGAGGATACCCAGGGGGTAGCGAAAAATTATCAAAATTTGCC
TTGTCCAGGGGGTCAACTGATGTTTGTCTGGGAGTAAAACCCGTTGTCCA
AGGGGCTAAAAGTCACTTTGTCTGGGGGGTAAATCACTGAAAATTATTAT
ATCCTCCACCACCCATATTCAATTTCTTTCTGGAAGAAAAGCCCATCCTT
TCATTCTAGCCCATTCTGTACGGAACACTAAAATGTGTTTGCAATTAAAA
TTGCTTTGCCACCTGATTCTTTAGGATTTCAAGCTGAGAAGAATAAAGAA
TTTACATTATTGTCAGAACAAGTGAATCTCATATTATCCCAGCTGGCACA
CAACGTTGTTTCAACGTTCATCTAACGTTATACGGATGTTATAAACATTA
GATAAAGGTTGAAACAACGTTGTGTCTTTTATTCTCATTCTAGCCTTGTT
ATGGACCGCACCAGAGCATTTGGACAATATGAAAGAAGAACGATCAAAAG
AAGGCGATGTTTACAGCTATGGAATTATCTTACAAGAAATCATAACCAGA
GGATCTCCATATTCGATGTATGAAAACTTGTCTGCTAAAGGTATGTTTAT
TGAGGCTCGGAATTCCCGAGTTAGAAAAACCGAGTTAGAAAACCGAGTAT
GCAAAAATCCGAGTTATGACGTCATCTAGCGAAAATTTTGACGTCACAAA
CAAAATATCTAACTCGATATTTTTTGTCAAATTAAAATTTTCGAGTTAGC
TAACTCGATTTCTTTTGTCAAATTAAATTCTTTCGAAATTTTCGAGTTAG
CTAACTTGTCTGCTAAAGGTATGCTTGTTTATTTGAAATCATATTGTCAA
CATGCCAATATGACGTTATTTCTTAAGTTGTTTAGGACACCCCTGTGCCA
ACACCCGCTGGGACCCCACCCCCACTGGGAAATTTGGCAAAAATTCATCC
GCGGCAGGAAAAAATACCCTGAAATTTCAGCCCCACTGGGAAATTAACTT
TGATTTCACTCCCCATTCGAAATTCAATGTTCAAAAATTGCACTCCAAAT
AACCATCCCCACTGGATTTTTTAACCTTTGGAACAATAGAATTTCTATCC
CAATTGGGATTTTGATAGACGTTTTTAGGGAGCGGTCATAAAGTATCTAC
TAGATACTATATTTTTTCGCATCCCCCCCTACTAGAAAAATTTTTACGAG
AAAAAGAATTCATACAGATGCGGTACAAAGAGTATTATTTGTTTGTATGA
CAGTTTTTTATGTCAAAATAAGGTAAGGGAGATAGTTTCGCCCTGTTAAG
TTAAAGTATAACAGGGTTAAGACAAGAATCATCAAGTGGTTTTTTCTGAG
CTTCTGTAAGATTTGGAGAAAAAAATACGGCTTATTTTCCCCAGTAGCGA
CCTGGCTTAATTTTCTAGGGGTGCAAACTATGAAATTGGCGCCCCTGGTA
TTTTTTGTCCTTATTTGCGCCCTCCATTATTAAGTGAAAATATTAAACTG
TAAGAGAAGTATGGTTGAAAGTAACGCCCGGAATCTTTGAGTCAAGAAAC
TTGGAATTTGTTTTTTTGTAATTTGAAATTTTAAGGTGTTTGAACAAAGG
AGGGGCAACCATGGTTTGTGCCGACGGGCGAAAATTTCAATATTTTTCAC
CACCATTTTAACTAAAAGACACTTTGTTTTAACAAATTTCTTTTAAGAAG
TACTTTTTCAAACCACTCTGATGAGCTGTGAAAGCCACTAATCTACTTCC
CTCGCCTAGTTCAATGTTACAAACCAATAAGGGCAAGGCTATGATGCCCA
AATAATGTCAATATGAAATGTACATATATTCAATAAGATAAATTATGAGT
TGTCCTTCAAACGTAAAACTATGAAATTAGACTTCCTACATTTTCTCTTG
AGTTTCCCAAAAAAAATTGGAACCCCCCCCCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTATCCCACTGAAGAAAATGTTCC
ACCGGGGCTGTGAGACAGGGCTGTTTAGAGCTTTTATTGGAGCTACTAGA
AAGTTCGGTGTTATCAAAAAAATGCAACAGGGGTATCACTAAATTGTGTT
TTCAATAAAAATGCTTTGCCTCCTAATTTTGCATACTTTTAAGCTGAGAA
GAATATACAGAGAACAGGGGAATCTCTTATTACAGAGTTCAAAAAATAAT
AAATATCATCGAACGGTTTCGAGCAGAACAACTGCAAATAGTCAGAGCAA
GGGGGTCAAGTTAATCGTTCTGTATGATGATTTTAATTCACCAATTGGGA
CGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAACCA
TAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCGTCATTTTTATTAC
TTCAAATAACCAATTATTAAGGTATCTTATAAAATATCCATCTCATCTGC
ACTAATTAATAGCATGAATAAAAACCTGGTCTGGAAGTCGGGTTGTCTTT
TTTTTTCGAGGATGAAATATTTTTTACCCATTCGTTTTGGTCGTGATCAA
AATTGACGTCAGAGATTGGTCAATAACTTTTGGAAGCCACTGCAGTGGAG
TAGCTGTTGCCAGCAAAAATTCTGTAGATCGCCCATTTGTTTTGATCACG
ACAAAAATGCAACCTTTTTGCTTGCGTTTCCTGACCTTAAAGTTAGGAGA
CTTCTTATGTATACTGACTTCAAGAAATGACAAGTGTTATGGGGAGGCTT
TAAGAAGAATTAATGCAAATCAGATTTGAAAGTTTTAAAAAAAATCTAAC
TTATTTTAGAAATCCTTGACCGCGTGAAGAAATGTTCAAACCCTCGATTC
CGGCCGGTCGTACCGGAAGATTACGGACATCCCGAGTATCATGATCTGAT
GAGTCAGTGTTGGGAAGAAGCTCCTACGTCACGGCCTCGTTTTGATGAAA
TCATGAAAGCTCTGAAGAAACTAAACGGGGGAAAGTAAGTGTGCAACTCA
CAACGTTGTTTCAACGTTCATCTAACATTATATGGACGTTGGGCAACCTT
GTTCCCTTCTGTGTAATATCAGCTTTTTTATTGCTTTATTGACAGGGCTA
GATAATACCCTGGCATTAGCTGGTTTTCGAACGCGTAAGATTACGTAGTC
CAAAAACAAAACGTCAGATTTCATTCGTTCTTCATTTTTGAAACCGTTGC
ATTTCAGTGTAACTTTGTAACTTCAGATTGTTTTATGACTTATTCATGAT
ATGCACCACTGCAATGTCTTTTGACATTACGTCACAGAACCAATAGCTCA
TTGGTTGGAAGTGACCTAAAATCAGTCAATACGTCACTTTCAACCAATCA
GCTATTGGGTGGAACGGAAGACATTGCAATGGTGCATATCATGAATTGTT
TTGAGAAGTTCCCCCTCTGAGAGCCTGGAATACACGGGGACGAGGATGGG
ACCTTGGGAATATTATAAAAACGTTGAAAGAATGTTGTGTGTCAGCTGGG
TGTGTTTTCTTAAACTTTTTCACATGGTCTTCAAGGTCTTTCTTTCTATT
TCATTTTGCTTCCTTGAACTGCAACTTGAAGTACACTGCATCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCTTCAAAAATTTTGGATGTTCTTAT
AATTCTTAACCTTTTCCGTGAAAACATCAACATTTTGAATAAATTGATCA
AAATATTTCACATCATCTTCACTTTAACTTCTAATTATCTCTTTAGTGCA
ATATTACCGGGTGACCCACGAAAAAGTATAAGAGTTTGGAGGGTAACTGC
GTCCGAAAAAAATTGAATTTTAACCAAATTCTTTTGTCATGGTAAAGAGG
AAAGGCAAACTTAAATTTTGATGTATCATTTTTTAATTTTGGAAAAGTAG
TTATCAAGATATGGAGGTATAAAGTCAAAGGTCATTATAAAAAACAGTCA
AAAAAAGTCAAAAAACATCAAAAAAGACAGCAATCAATATTAACAAAATA
AAATGAGACATCGAGTGAGAAGCCGACTTTGATTTTTTTTACCGGAAGGA
TTCAGAAAAGAATAACAAAGGTTGACAATTCTTTTTTAATCATATTTATT
CATTTGGAAAAGTACGACCCCTAGCATTAATACTTTTGACTTTATACCTC
CATATCTCGATAACTATTTTTCCAAAATTTAAAAATTATACATCAAAATT
GTTTTCGGACACAGTTACCCTCCAAACTATTATACTTTTTCGTGGGTCAT
CCTACCTCTTCAATATTTCCCGCTAGAAACAATCATTATCTCTTTAATAT
TTTACTCATTAGAAACATTAACATCATTGATAACATGATCCAATTGACGG
AGAAGTGCACTGCATTTCCTAAATAATAATATCTCTATAATGCAAAATTA
TCTCCTTAATAATTTCAAATTAGGAACATTAACATCGTGGATAACATGAT
CCAAATGATCAATCAAATTATCTCTTTAGTGCAACGTTATCTCTTTAATA
TTTTTCTCATTAGGAACATTAACATTGTGGATAATATGATCAAAATGATG
GAGAAATACACAGACCATTTGGAAGAGTTGGTTGCAGAACGAACAAAACA
ACTGGAGGATGAGAAAGCCAAGACAGATGAATTACTTTACCGAATGTTAC
CAAGGTTGGTGGATCTTTTTTCACAGGGGGGGACTCAAAAACGACCATTT
TTGTCCATTTTCAGGCAAAATATAGTCAGATTTCCGAAATTTTACACCCT
TAGAGTGCAATTTTTCTCATCTTTTGCTGATTTCGACCCTTACAGTTCAC
TTTGGGAACCGAATGTTACCGAGATTTGTGGATCTTTTTTTCCCGGGGGT
GGGGAGGGTCGAATCAAAAACGACCATACGTGCGGCCCAAATTTAGGACT
TTGAATTCGGACCCTTACAGTGCAGAGAAAATTTTGCACTATTTGAGAGA
AAAATCGACCCTTACGGTGCATTTTGTTGAAAACTTTCGACCATTTTCAA
ATATGGTCCGATTTCCGAAATTTTACACCCTTAGAGTGCAATTTTTTTCA
TTTTTGCTGATTTCGACCCTTGCAGTGCACTTTGGGAAGCTTGGAAAATA
TACCCTTGAGGGCTGCAGGTATGGTAGGTCATTTTTTCCAAACCCTTTTC
TGGATAAGTGCAATGTTATTCTTTAAAATAAGGATTTCGATGATGAAATA
CTTGTCGCAGAAGAATCCTATTTTGCTGAAAATGTCTTGTCTTAAAGTTA
TTTAAAATCTTTGAAAGCAGGTCTGAGTTAACCTTTCACTCCTCTAATAT
ATCAAAANCCTATTTTGCTGAAAATGTCTTGTCTTAAAGTTATTTAAAAT
CTTTGAAAGCAGGTCTGAGTTAACCTTTCACTCCTCTGATATATCAAAAT
CCATCCTCTTGTTTGAAATGACTGAACTCATACTATTTGAAAATGGTCAC
AAAATTCACAATGTCACAAAATTCGTCCTTTTTATTCAAAAAAATTGCAT
GAACTAAATCTAATTTTTGAACGGCGTTCATATAATGCGTCACATTATCC
TATCCCCAAATTTGATAAAAATCTTTCTCGATTTTGCCGAAAATGTCTCC
AATATTGTCCTTAAAATCGAGTTTATATGAATTTCTATAAATGTGTCAAC
TTATATTACACAGGCTTATAATACACAAATTAAAGTCTGAAGACAAATCA
CGCTTTTACTCGAAATTTTTATGTGCTTGGTACATGACATTTATTTCTGA
TTGGTTCGAATTTATTGACACTAATAAAGTTATCAGCTGTAAGTAAGTAA
AGAAAGTAACATGAGAATAAAATCACGTGAACTTTTTCGAGTATAATCAC
ATGTTTTGAGTGCATTGATATAATTTTGCAACCCGTGTATTCTTCTTGTT
CCACTTATAGAACCGTAGCAGAACAGCTGAAACATGGAGAAGCAGTGAGC
GCTGAGACGTTCGATATGGTGACAATCTTTTTCAGTGACATTGTTGGGTT
CACCAAACTGGCTGCCGAATCCACTCCAATGCAGGTAGGGTTTAATGGTT
AAAATGTTGTTATAGCAGACTCTTCCAAATTGCCCTGGTCAAAATTCTTG
ATAAGATCTTGGCAATTTCTTGGAAGATTTAATATGATCTTGTCTTGCAA
AGTCGTATTTTTTCGTTTATGATCTTGGAAAATGTTCTTGTAATATCTTG
TATGATTCTATATTATCCAAGATCTTGGATTTTTTCGGCGATATCTTGGT
AAGATTTTCTAAGATCTTGTCTTGTAAAGTCTTGCTTTTTCGTTTATGAT
CTTGGAAAATGTTCTCGTAAAATCTTGTAAGATCCTATATTATCCAAGAT
ATTGGATTTTCTTAGCAAGATCTTGTACCAGCAACCCATAACGAATCACC
GCAAATGTCGAGTTTCGTTTATAGGAAGTGTAAAGACTCAGTTTTATTCA
ACAGATTAGAATATTACAGTGACGTAGCCGAGAGGGGCGCAAAATTTGTG
TAGGAGAGAAGATTTTTATGATATAGTAATTATCTATGAATACCATGGGT
GTTCAAGCTAATTGCTGCTTGAACGTGTGAATCATATAAATGTTGTGTTG
GTGAAATAAAGAAAGACTGGAAAAGAAAAGAAATTTTACTACTTCTCGCT
GGAATGCCAGAGACTCGTTCAAGCAAAAGTAATAATTTCCTTTGTTTTCC
TGGGGAAGGTCTGACGTTCCTTGAGATGTTGGAAAGCGTGCAGTGTAATT
ACTTAACAATGAGTTTTAAAAATCAATGTGAATGATTAGAAATGAATACA
TGAAGGAATTTTTCATCAGACAAACTTATTTATTCACAACACAGTAATTT
GTTTGATGTATAAGGAGAAAGAAAATGTTTGCTTGTGAAAGTCATTAACG
ATTATCCAAACGAAAATGAACTGACTATACATATTTGAACAAATTAAATT
AAAAACCCTACATTTGTATATTTTTCCAATACGTGTAATACGGCTTTTTT
TCCATATAAGAATAAAAAATATTCTAATGATAAGTGGCATCCCGAAAAGA
ATCTCGGTTCACAAACCTATTTTAATTGCTCATTTTACTTAAATCATATC
GACTTCAAGTATGCTTGACATCTTCAAGCGTCCGTGCAAACTCACATAAT
AGCAAACAATAGAGAAAATCGTGCATTCAATTGTTCACCATGTTTCAAGC
AGATAGTGTGAAAACACCCCATGAATATGTAATTACAGATGTAATAAAAA
TCTGCTCTTCTACACAAATTTTGCGCCCCTCTTGGCTACGCTACTGAAAG
GGAATCAAAAAGAAACGGACTACTAAAATGGCGTGGGTGTGGGTCATCTT
TGGCTAGACTTTGTCATATAGTCTTTCCTACATCTTGATTGTTCTGACTT
ATATCTTTCATCAATTTACAGGTTGTTGATTTGTTGAACGATTTATACAC
GTGTTTTGATCAGATTGTCGACCAGCATCATGTTTATAAGGTAGGTGAAC
TAACTAACACTCTTCGTTAGAATAAAATCCACTCGGCATCCATAATAGCG
CGTTTATGTGTTTGTATATTTGAGGGAGGCTAAGTGGACTGAAGCGATTT
TGAATAACCCGCATTTCTGACCCGCAAAATCTAGGACGGTAAAAGTAATG
ATTTACCAATGTCCTCAGTCAGTCAGGATATAGACAAATAACAAGCTTAA
CATCTCCATCGCAGAAAAACACATATACATAAACAAATGTTGGAATAGCG
TTATAACTTTTAAAGCCTTCAAATCATCTTAACTTTTTGAGATAAGCCCT
GATCTTAACTTTTTGAGTTAAGGCCCTGATCTTAACTTTTTGAGTTAAGC
CCTGGTCTTAACTTTTTGAGTTAAGCCCTGATCTTAATTTTTTGAGTTAA
GCCATATTTTTTTTGCCGGGGCTTACGAAGCTTTGTTCGTGATGTCTTCC
GTAAATTCCAAACCTGGCTTCGAATCTTTCTCACTTTAGGTATGATGAGT
GACGTTATTGAAAAATCTTTCGTGTCAAAAGTTACCTTATATGACAAAGA
TCAAAAGTTAAGGGCTGACACAGGAAAAGCCCCCCTCTCCATAGTTTTAA
ACCGCCTTTAAAAGACAAGTATTAATATAATAAATCAATAATTTTGACCA
TTTCATTTAAAGGTAGAAACGATTGGAGACGCATACATGGTGGTGAGCGG
TCTCCCCGAACGAAATGGAAATCGACACGCGGGTGAAATCGCACGCATGT
CTCTCGACCTGTTGAGTGCAACAACCACTTTCGTTGTGAGACATAAGAAA
GAGTATCGCATACAGCTAAGGATTGGCATTCACTCAGGTTAGTTTGTTTC
AATTTTTTTCGTGATATTTATGACGTGATGTTTTATACAAAAGCACCCAA
ACAAGCCCAGGCGTTTGCCACTGATTTTAATAAGAGCTAGTGGAAAATCG
CCCAAAGCTATTATGGGTGCTTAAGTCTCAAACATTACGTCATAAATACA
TTTATTAGTACGGGCTCTTCAAACATGAAAAGTGTAAATTTGAATAATCT
GTAAAATTTTAAAAGTTTTATATTTGTCGTGGTGGGATCTCCTGCCTTTG
AAGATTTTTAGAAATTGGTAACTTGGTTATTTAATTTTTCTAATGAACAT
GGTTAAGAGCATCCCTGTGTCACAGATACGTTGGGATCCCTACCCCACTG
GAAAATGTAGCCAAAAATTCGGTCCCTGTTGGAATATAACCTACAAATTC
AGCCCCACTGGAAAACCGACTTTGATTTCTTCCCCACTAAAATTCTCAAA
ATTGTTCCAATAAGGCTTAGAATATAGCCTAGAAGCCAACGAACCCCTCC
AAAATTAAAATATTCAATGAAAGAAAGTGGAAGTGCTAAAATTACCATTC
TCAGCCGAACTTTAAATTCTGAGAAAACTTAGAATACACAAAAATGCCAA
CATATTCTGACCACCATTCTAGGTTCATGTGTTGCTGGAGTTGTTGGCTT
AAAAATGCCGCGTTATTGCTTGTTTGGTGATACTGTGAACTATGCAAGTC
GTATGGAGTCTAGTGGACTGGGTAGGTTACTTTCATCGTTGCTTTTTGAT
TGGCTCTTTTACAGAATACTGAAATATGATTGGCTAATAACCTATTTCAT
ATGATTTGTGTATCTGTTATATGCTATTTTCAATTCAATAGACCTTATCG
GAGTTTTTGATTTTCTAAAAAAAGCGATGCACTGTAAGATTGTTTCGAGG
GTATTACAATAGGAATTCCCAAGAGGTCTCTATTGTAATACCCTCGTAAC
AATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGT
CTATTTACAAGAGAAAACATAAATATGTGCAGATTTCCCTCTGAGAAAGA
CGTTGAAAATTTTGATTCTTTTTTTTCATTCGATTGAACTATTTTCCATT
GCTGTTGTCTTTTTAATAATCATATCTAAATTTGCAAATGAAGGACAACC
CATTGACTTTGAAGCCCCGAAACTCTTGAATGGGAAATGAAACCACTCAC
CCCCCCCTCCAAGACCCGTATGGTTTTCTTACAAACGCCGGATCGAAAGT
ATAATCTATCGCAAGATTTTGAAAAAATATGTCAACAGATTTTAGTGAAT
TTCAGAAAGATTCGAATTACAGAGAGCTAAACCACTTTTTAGTTGAAGAG
ACAAATACTTTATTACGAACTATAGGAAGATTCGAATAACAGAGATTCGA
ATTAGAGAGAGTTGGCAGTGATCATTTACACTTACAATAGACCTTATCGG
AGTTATTATTAGACAGTTGGATTTGATCATTTAAACTTTTCATTAAAANT
TCGAGGAACAGAGATTCGAATTAGACAGTTGGATTTGATCATTTAAAATT
ACAATTCCAATCATCTTTTTCTCCTCATTTTCAGCATTAAGAATTCACGT
CAGTCCAGAATGCCATGAGGTTTTGACTGAACTTGGTGGCTACCATCTTA
TCGAGCGTGGTCCTGTCTCTATGAAGGTAGGTTGATTTTACCTGAAAACT
GTTTCCCAGACGACACACAACGTCAAAACAACGTCTATGTGACATTCATA
ACGTCCAAATAACGTTATTTGGACGTTAAAACAACGTTGTGTGCCAGTTG
GGCTTTTAGTGTGTATACACGGATTTCCTTTTCGCAGATGCATGTAAAAA
AGTCACGAAAAAATACCGAGTAAACGCTCTGATTGGCTGACCTTAAATTA
ACATTTCACGGTTGGGTAGTTCAGTTGGTAGATCATTCGCTTTACAATCC
AAGGGGTGAGGGTTCGATTCCCTTTTCACAGAGAATGGGTAGCATAGATT
AGATAACCTGATCTAGGCGGTAAGAAGTTGTCTGGAGCTAAGAATAGGTA
TGGCGCTCAGCATTTGACTTCCCAGGTCTAGCGCAAATAGTAAAGGGTAT
AGACTGCCTCACTCCCGGCTCCATGAATAGATGACTCTCTCTAATTCGAT
CTTAAAGGAACTAAAAATTTTCTTCGAGTTACATAAAAATTTGGATAGTA
AAGCTTCGGATCTGGAGGTACTAGGTTTGCGAGATGACGGTATGTCTGAG
CCAAAGTTCGAAAATTGACCTTTAGAGACAATATATTTCGAAAATTTTGT
CCAGTATTTTTTGACGTTTTTGTCACCTTAAATTTCAGCTAAAGAGTTTC
AAATCTTAGTTTACCGTTTACCATAAGTTTCAAGAACTCAAGACCCTTTG
AGAAATGATTTTCGATTTTGGTAATTCTGGAACCATTACAAAGACTCAGT
TGCTTTTTAATGGTTTGTGTACCCCTTTGAGGGACTTTCGAGGGTTTTAA
AAAAGGGAAATTTATTTTCTTTTTCAGGGCAAAGGGACCATAGTGACCTA
CTTCTTAGCTGGTTATGACGGTTTCGACAAAACCTTACCTGATCTTCAAT
TCGCTGCTGGTTTAGAAGAACACTCCTTCAAGTAACACGCCGCGTGTACG
CCGAACAGATCTAGAATACAAGGCTAGCGAAAGGAGAAGTGGAGGAGAGC
CTGACGTTCTAATCTATAATGGGTTATGGAAAAAGTAAACAAGCTCTTAT
GCTTTGAGCAGCAAACATTATTGAAAACAAAGGTTAAACTATGGACGTTT
TACATGTTTTGTTGAGTTATGAATCCGCCATTATGGAAGGAAACGTTCGA
TTTGCGTAAAGGATCGTCTCTGCAGATTCGAATGTTATTTGCTTCCATAA
TGGCGGTAAACATAAACAAAAAAACCTCCATACCCCACATGAGGTTGTTA
TTCTTTTGTGTGAAGATAAACAACGACTCGCCGTGTCTCATAGCTGGCAC
ACAAAGTCATTTCAACGTTCATCTAACGTTATATGGACGTTGCGAACGTT
AGATGAACGTTGAAACAACGTTGTGTGCCAGCTGAGCTATTTCAAATGAA
AGAACTTTTCGATAACAACATAAAACAGACGTTGTATGGCTGATTTTAAA
ACAATTTTATCAACGCAACAAACGTTTATGTCATAAATGTACGAGAGTAA
AGAAACGTGAAGAGAAAAAACATTCAAATTCAGATACTTTAAAAGACAAT
GAAAAACAATGGGTGAGCGTAAAACAACACCATCTATTGTTGCTTACTGG
TGTCCCAAGGCAAGGATGAACAGAGTAATATTTCTGCGCTCTCTGATGTT
GGATTTCCGAATTATAAGATTGAGAAATTTCAACCTACAGTTGACTCTCT
CTAATTCGAACTCAAACGAGAAATCTTATTTGTTCGAAATACAGAGGGAT
TCAAATTAGAGTCTTTTAAGAGGGTTTTTACTTGACGGAGACTGAAAAAT
ATTCGAAGATTCGAATAATAGAAGTTCGAATAAGAGAGAATTTACTGTAA
TTTACTATTTAAATACATACTTAAAATATCTGAATCCATTCGATAATTTT
TGAACACTTATTTCGAATTGGCCTTTTAGTCCAATGGATCTATGTATGTC
AAATTTGTTATCTAATTTTACAGGTTTCAACTCGTTCTTCAGTGAACTCC
TTCTAACTCGAACTTTTACCATTCGAATCTTTCTATAATTCAAACTAAAT
TTTCGGTCACCCTAAGCTGTTAAGTAATATAAAATAGTCTCTGTAATTTG
AATTTTTCTCTAATTCGAAGAGAAGTTTTGGTCTCGTGACGATCGAATTA
GAGAGAGTCAACTGAGAGAGTTGGTCTTTACAGAAAATCTTCATCGATTT
ACAGAAAGATTCGAATTACAGGGAGTATTTTATGCTAAAGGACCCAATAT
TTTAGTTCGAATTACAATAAGATTTTGGATTTGCAAAGTTTCGAATTAGA
GAGATTATTTTGATAAAAATCACGTACTTAGGAATCTTCGATTACAAATT
GACTCATGGATAGTTAAACAAATACTTGATGGATAGGACACCCCTGTGTC
ACAGACCCGATGGAACCCTCCCCCCCCCACTGGAAGAATTGGTCAAAAAA
TCGCCTTACTGTAATATATATACCCTAAATTTCAACCCCACTGAGGAATT
ATACCCTGATTTTATTTTAAATTACACTCCCACTGGCTTTTCTGAGCTTA
AAGACAAAAAACTTCTTCCCCATTGGGATTTCTAGAAAAATTGCCATCCC
ACGGAGAGAAAAAGTTCCACCGGTGCTGTGAGACAGGGGGTGTGTTTTAG
GCAAGTGTTTCTAAAAAGCTGTATTATAAAGCCAAAACACAGATACTGTA
TTACTTCGAATAAAAGCCCCGGACGTTTTTTAGATATTTTTGATATTTGG
AGAGGCATTTATTCAAGGGGCGTTTGAAGGAAGGGGGCCTTTGTTCGAAG
TAATATGGTAATTAACTCTAACAAGATGTGTCCTGTAAATATATTATGTA
AATGATAACTTGTAATTATGAAACATATTTTTAGTACAATCATATAGTGA
TGCCAAAGTAAAAAACCAAATAAACAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003509XLOC_003509Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006145-exon-sc0000063-1575043694:198099..198153TCONS_00006145-exon-sc0000063-1575043694:198099..198153Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:196164..196310TCONS_00006145-exon-sc0000063-1575043694:196164..196310Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:193170..193344TCONS_00006145-exon-sc0000063-1575043694:193170..193344Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:191450..191590TCONS_00006145-exon-sc0000063-1575043694:191450..191590Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:190070..190193TCONS_00006145-exon-sc0000063-1575043694:190070..190193Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:188610..188682TCONS_00006145-exon-sc0000063-1575043694:188610..188682Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:187767..187937TCONS_00006145-exon-sc0000063-1575043694:187767..187937Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:187033..187131TCONS_00006145-exon-sc0000063-1575043694:187033..187131Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:186078..186169TCONS_00006145-exon-sc0000063-1575043694:186078..186169Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1575043694:183126..185226TCONS_00006145-exon-sc0000063-1575043694:183126..185226Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:198099..198153TCONS_00006145-exon-sc0000063-1510915933:198099..198153Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:196164..196310TCONS_00006145-exon-sc0000063-1510915933:196164..196310Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:193170..193344TCONS_00006145-exon-sc0000063-1510915933:193170..193344Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:191450..191590TCONS_00006145-exon-sc0000063-1510915933:191450..191590Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:190070..190193TCONS_00006145-exon-sc0000063-1510915933:190070..190193Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:188610..188682TCONS_00006145-exon-sc0000063-1510915933:188610..188682Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:187767..187937TCONS_00006145-exon-sc0000063-1510915933:187767..187937Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:187033..187131TCONS_00006145-exon-sc0000063-1510915933:187033..187131Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:186078..186169TCONS_00006145-exon-sc0000063-1510915933:186078..186169Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1510915933:183126..185226TCONS_00006145-exon-sc0000063-1510915933:183126..185226Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:198099..198153TCONS_00006145-exon-sc0000063-1491911889:198099..198153Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:196164..196310TCONS_00006145-exon-sc0000063-1491911889:196164..196310Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:193170..193344TCONS_00006145-exon-sc0000063-1491911889:193170..193344Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:191450..191590TCONS_00006145-exon-sc0000063-1491911889:191450..191590Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:190070..190193TCONS_00006145-exon-sc0000063-1491911889:190070..190193Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:188610..188682TCONS_00006145-exon-sc0000063-1491911889:188610..188682Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:187767..187937TCONS_00006145-exon-sc0000063-1491911889:187767..187937Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:187033..187131TCONS_00006145-exon-sc0000063-1491911889:187033..187131Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:186078..186169TCONS_00006145-exon-sc0000063-1491911889:186078..186169Clytia hemisphaericaexon
TCONS_00006145-exon-sc0000063-1491911889:183126..185226TCONS_00006145-exon-sc0000063-1491911889:183126..185226Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:183126..198153 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.0252063	1.03214	0.679273	2.72217e-09	0	0	0	0	0	0	1.66847	1.19716	0.000316265	7.19507e-07	0	0
Blast
[Close]
BLAST of TCONS_00006145 vs. Swiss-Prot (Human)
Match: ANPRA (Atrial natriuretic peptide receptor 1 OS=Homo sapiens GN=NPR1 PE=1 SV=1)

HSP 1 Score: 400.979 bits (1029), Expect = 3.933e-121
Identity = 207/361 (57.34%), Postives = 252/361 (69.81%), Query Frame = 1 
Query:   49 YDALLWTAPEHLDNMKE--ERSKEGDVYSYGIILQEIITRGSPYSMYE-NLSAKEILDRVKKCSNPRFRPVVPEDYGHPEYHDLMSQCWEEAPTSRPRFDEIMKALKKLNGGKNINIVDNMIKMMEKYTDHLEELVAERTKQLEDEKAKTDELLYRMLPRTVAEQLKHGEAVSAETFDMVTIFFSDIVGFTKLAAESTPMQVVDLLNDLYTCFDQIVDQHHVYKVETIGDAYMVVSGLPERNGNRHAGEIARMSLDLLSATTTFVVRHKKEYRIQLRIGIHSGSCVAGVVGLKMPRYCLFGDTVNYASRMESSGLALRIHVSPECHEVLTELGGYHLIERGPVSMKGKGTIVTYFLAGYDG 1122
            Y   LWTAPE L         S+ GDVYS+GIILQEI  R   + +   +LS KEI++RV +   P FRP +       E   LM +CW E P  RP F +I   L+K N   + NI+DN++  ME+Y ++LEELV ERT+   +EK K + LLY++LP +VAEQLK GE V AE FD VTI+FSDIVGFT L+AESTPMQVV LLNDLYTCFD ++D   VYKVETIGDAYMVVSGLP RNG  HA E+ARM+L LL A  +F +RH+ + +++LRIGIH+G   AGVVGLKMPRYCLFGDTVN ASRMES+G AL+IH+S E   VL E GG+ L  RG V MKGKG + TY+L G  G
Sbjct:  696 YAKKLWTAPELLRMASPPVRGSQAGDVYSFGIILQEIALRSGVFHVEGLDLSPKEIIERVTRGEQPPFRPSLALQSHLEELGLLMQRCWAEDPQERPPFQQIRLTLRKFNRENSSNILDNLLSRMEQYANNLEELVEERTQAYLEEKRKAEALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTALSAESTPMQVVTLLNDLYTCFDAVIDNFDVYKVETIGDAYMVVSGLPVRNGRLHACEVARMALALLDAVRSFRIRHRPQEQLRLRIGIHTGPVCAGVVGLKMPRYCLFGDTVNTASRMESNGEALKIHLSSETKAVLEEFGGFELELRGDVEMKGKGKVRTYWLLGERG 1056
The following BLAST results are available for this feature:
BLAST of TCONS_00006145 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANPRA3.933e-12157.34Atrial natriuretic peptide receptor 1 OS=Homo sapi... [more]
back to top