TCONS_00006144 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006144
Unique NameTCONS_00006144
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1946

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006144 ID=TCONS_00006144|Name=TCONS_00006144|organism=Clytia hemisphaerica|type=transcript|length=1946bp
CCGACTTCACCAATCTCCCcacgaaaattacaaaatggCGTCGTATGAAA
ATCTGTTAGATGAAGAAAGTGGGGAAAGTgatattgattttgatgaaagt
GATTTAGAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGCTTAT
TGTCACAGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTACCAC
TACAGCGAATACCAACATTAGTGTTTGTTGATGAGACAGATACTACTGTC
TGTGTCTTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAACAGA
TTTCACTGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTGGCAT
TAGTCACAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAATACT
GCTACTTCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTGGCAC
GTCATCACTAGAATGTCCATTCtgcttcaaaaaatacaaatccaAACACT
GGTACAAGTCCCATGTGGAAAAATGTGTTCAAAAATatcaAGTTGAAAAT
GGTACTGATGCTAAAAATGGTGGATCAAACGAAAACGTTGCAGTAAATGT
TGAGAAAGAGAATGAATTCCTGACACACGGAAATGATCTGTTGGACAAGG
CCCTGCAATCTGTTATTGATGATCCAATATACCGAATCTGTGAACCGGGA
TCATCTACTTTTGCTCTCGCCAAAGAGATCAAGGAGTCAACGTCATCTGT
TATTAAAGCAACTTATCAGAAACACCTTCTACAAAGTATTTTCAAGATTG
TCAGAGACCCAACAACTTTCTTGAAAAATACTTCCGCTGCGCTTGgtcaa
tttcataatttttgtgTTGGAGAAACACAACTCAACAAATGGGATGAATT
CTTGACAGACATTGGTCTTTCTGTAATTGAGAAAGTCCCCTCGagaattc
tttttaattgtgTTTTGAATTATATCCTAAAAGAAACTATATCCTTCCAT
AAACCAAAGGAAGATGCTCCCAAAATCGACTACAATTTATCAAAAGATGA
GGAAGAATCTTTGTACTACGTGGCTGGGTATCTTGTTTTCTCGATTAGAA
AAAACACTAAAACCAAAACTGAGCAGGGAAAAACAATCCATAGATTGTTA
AATACATGGGGATCAAAGAAAGACGAAGAATTTCAAGACCTCTCTCTTAA
TGAATATACAAAGGCATGGGTTGATCAAGTGAATCGTGGAGGGCTATTTA
AAGTCAATGGCCAATTTTATGATTTGGTTGTCATTATCGAAAAAGTAGCT
CGATCCATATTAAATCTGAGTTTATTTGTAACATATTGTGGAGAAAGTAT
TCGAATAGTACTACGTGAAGCTTTTGAAAATAGTGAGGATGTGATAAAGG
CATGGAAATTACTTACTTCAGATGTTGCTAATGTTAAAATCAAAGATAAA
CTTCTACAGTTGCTATTAAATAAATGGATTAATGTTAGAGCAAACGCATT
CATCAAAGTCTGGCTCCAACAGTATAAGTGGAATCAGTCGAAGAAAGGAG
AGGCAGTCACCGAGCAAGGAGAGCCATCTTTACGCAAATCTTtgggaaaa
agtaaaaaacttggGAAAAGACTATTGACACCAATAAAACCATCCAGCCC
AAGGAAAACTAAAAGCAGGACAGTGAGAGCAGCTGCAAAAAAACTTGCTA
CAGCAAAAGCTGTAAAACGCAAGATTGCTACCAAGACCTAAATggaattt
ataaatctttcatcaatttcttttgtgatttcTATCAACTACCtattttt
gtctttatttttgtatttttttttagatttagtATCAAATTTAATCTCTC
TCTGGAAAGGTACCGTTGAGTAGGCATTTCTTGTTTATTTTCGCGGAAAA
TCTTACAGGGTTGCCACGTCTGCCAGAAATGTCTGGAAAAAGTCTG
Run BLAST on NCBI

protein sequence of TCONS_00006144-protein

>TCONS_00006144-protein ID=TCONS_00006144-protein|Name=TCONS_00006144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=579bp
RLHQSPHENYKMASYENLLDEESGESDIDFDESDLEDSVFGEDEFVEELI
VTEDDLPENCDENYLPLQRIPTLVFVDETDTTVCVFGDDGPLNTDEPKTD
FTVSANDDLDDETFLALVTNEPSVSQLQQPQNTATSTTATSAGTSTTAGT
SSLECPFCFKKYKSKHWYKSHVEKCVQKYQVENGTDAKNGGSNENVAVNV
EKENEFLTHGNDLLDKALQSVIDDPIYRICEPGSSTFALAKEIKESTSSV
IKATYQKHLLQSIFKIVRDPTTFLKNTSAALGQFHNFCVGETQLNKWDEF
LTDIGLSVIEKVPSRILFNCVLNYILKETISFHKPKEDAPKIDYNLSKDE
EESLYYVAGYLVFSIRKNTKTKTEQGKTIHRLLNTWGSKKDEEFQDLSLN
EYTKAWVDQVNRGGLFKVNGQFYDLVVIIEKVARSILNLSLFVTYCGESI
RIVLREAFENSEDVIKAWKLLTSDVANVKIKDKLLQLLLNKWINVRANAF
IKVWLQQYKWNQSKKGEAVTEQGEPSLRKSLGKSKKLGKRLLTPIKPSSP
RKTKSRTVRAAAKKLATAKAVKRKIATKT
Run BLAST on NCBI

transcript from alignment at sc0000063:46185..49282-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006144 ID=TCONS_00006144|Name=TCONS_00006144|organism=Clytia hemisphaerica|type=transcript|length=3098bp|location=Sequence derived from alignment at sc0000063:46185..49282- (Clytia hemisphaerica)
CCGACTTCACCAATCTCCCCACGAAAATTACAAAATGGCGTCGTATGAAA
ATCTGTTAGATGAAGAAAGTGGGGAAAGTGATATTGATTTTGATGAAAGT
GATTTAGAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGCTTAT
TGTCACAGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTACCAC
TACAGCGAATACCAACATTAGTGTTTGTTGATGAGACAGATACTACTGTC
TGTGTCTTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAACAGA
TTTCACTGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTGGCAT
TAGTCACAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAATACT
GCTACTTCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTGGCAC
GTCATCACTAGAATGTCCATTCTGCTTCAAAAAATACAAATCCAAACACT
GGTACAAGTCCCATGTGGAAAAATGTGTTCAAAAATGTAAGTAGGATACA
AGGCAAAAATCTAAATAAAATTTTAAAATAATTATTTTATTTTTTTGTAT
GTACAGGATGATCTATCTTCTTTCTCTTACTTTACTCAAAGAAAACAGAA
ATAATCAAGTATTCTTCTTTAGGTTTGCGTTCGTAAGAAATCGTGTTATT
TTTTCAAAATTATGTATTTTTGCATGTGCTTTATATATGGCCTAACAAAT
TTTTCCTTCATCCATCCACTTGAAAACCCAACAAAATACTGCAGTCTTCA
GCAATCACGCATGTAACATACAAAGGATGACACAACCTTGAAATCTGAAC
TAAATTTATGCTTCTCTTTCTATAACGGTGAAGTCGGGTAACTTGCATTG
ATGGAGGGAAACTTGCAGAGCCATCAAACATGACTGACCGTTCAAAGCAA
CAAAATTTGAATAGTTTGTTTTTAGCTCTAAATAGTTTGACAATATCAAG
GATCTTGTTGAGTGAAAGTGAATATTTATTTACTATGAACAGGTAGTAAC
AAGTCGGTTACTGTACTTATGGCTCAAATTTCAAAAAATTTGCTCAACTC
TTACGATACTGAAACAACCCTGGAAAAATTTCTGATATATTGTAAAAAGA
ACCAGCCATTCTTGTACAGAATAATTTTTCTTCATTCATTTCAGACAGAG
TCAAAATTTCATGTAGATTTGCTGGCCTGGATTTGGTTGTACTGCAGCAT
TTTCCCAAATTTAGCTTTTAAATATTGAGCAAACCTTTTGAAAGTTGAGG
CTATAAGGACCCGATAGGCAACTAGATAACCCTAATGGTAGTTGGTTGAG
TTTTTCCTCTCACTTCGATTATGTTATTAACAATCCTTTTCATTTTTTTC
TTCAGATCAAGTTGAAAATGGTACTGATGCTAAAAATGGTGGATCAAACG
AAAACGTTGCAGTAAATGTTGAGAAAGAGAATGGTAAATTTGCACATACT
TTTTTCTATTATAAAGGATTCATAGTGTACTATAAAACCTTTTATAAAAC
AAAATAATTTATTGTTTTCATCTATTATTCTGAGGAATTTTTTATGGGAC
ACTCAACAGATAATATATATAATATATATGCGGAGACTTTGATGTGGGTT
GACGGGTTTAAGTCATAGAATAACTATGAATAATTTTCAGATTTTGACTG
AATTTCCCAGTTTTGAAATTGTCACAAAAATTTGTCGCTGAATTTCTGTT
CTTTTTTCTGATTTAGAATTCCTGACACACGGAAATGATCTGTTGGACAA
GGCCCTGCAATCTGTTATTGATGATCCAATATACCGAATCTGTGAACCGG
GATCATCTACTTTTGCTCTCGCCAAAGAGATCAAGGAGTCAACGTCATCT
GTTATTAAAGCAACTTATCAGAAACACCTTCTACAAAGTATTTTCAAGAT
TGTCAGAGACCCAACAACTTTCTTGAAAAATACTTCCGCTGCGCTTGGTC
AATTTCATAATTTTTGTGTTGGAGAAACACAACTCAACAAATGGGATGAA
TTCTTGACAGACATTGGTCTTTCTGTAATTGAGAAAGTCCCCTCGAGAAT
TCTTTTTAATTGTGTTTTGAATTATATCCTAAAAGAAACTATATCCTTCC
ATAAACCAAAGGAAGATGCTCCCAAAATCGACTACAATTTATCAAAAGAT
GAGGAAGAATCTTTGTACTACGTGGCTGGGTATCTTGTTTTCTCGATTAG
AAAAAACACTAAAACCAAAACTGAGCAGGGAAAAACAATCCATAGATTGT
TAAATACATGGGGATCAAAGAAAGACGAAGAATTTCAAGACCTCTCTCTT
AATGAATATACAAAGGCATGGGTTGATCAAGTGAATCGTGGAGGGCTATT
TAAAGTCAATGGCCAATTTTATGATTTGGTTGTCATTATCGAAAAAGTAG
CTCGATCCATATTAAATCTGAGTTTATTTGTAACATATTGTGGAGAAAGT
ATTCGAATAGTACTACGTGAAGCTTTTGAAAATAGTGAGGATGTGATAAA
GGCATGGAAATTACTTACTTCAGATGTTGCTAATGTTAAAATCAAAGATA
AACTTCTACAGTTGCTATTAAATAAATGGATTAATGTTAGAGCAAACGCA
TTCATCAAAGTCTGGCTCCAACAGTATAAGTGGAATCAGTCGAAGAAAGG
AGAGGCAGTCACCGAGCAAGGAGAGCCATCTTTACGCAAATCTTTGGGAA
AAAGTAAAAAACTTGGGAAAAGACTATTGACACCAATAAAACCATCCAGC
CCAAGGAAAACTAAAAGCAGGACAGTGAGAGCAGCTGCAAAAAAACTTGC
TACAGCAAAAGCTGTAAAACGCAAGATTGCTACCAAGACCTAAATGGAAT
TTATAAATCTTTCATCAATTTCTTTTGTGATTTCTATCAACTACCTATTT
TTGTCTTTATTTTTGTATTTTTTTTTAGATTTAGTATCAAATTTAATCTC
TCTCTGGAAAGGTACCGTTGAGTAGGCATTTCTTGTTTATTTTCGCGGAA
AATCTTACAGGGTTGCCACGTCTGCCAGAAATGTCTGGAAAAAGTCTG

Coding sequence (CDS) from alignment at sc0000063:46185..49282-

>TCONS_00006144 ID=TCONS_00006144|Name=TCONS_00006144|organism=Clytia hemisphaerica|type=CDS|length=5220bp|location=Sequence derived from alignment at sc0000063:46185..49282- (Clytia hemisphaerica)
AATTCCTGACACACGGAAATGATCTGTTGGACAAGGCCCTGCAATCTGTT
ATTGATGATCCAATATACCGAATCTGTGAACCGGGATCATCTACTTTTGC
TCTCGCCAAAGAGATCAAGGAGTCAACGTCATCTGTTATTAAAGCAACTT
ATCAGAAACACCTTCTACAAAGTATTTTCAAGATTGTCAGAGACCCAACA
ACTTTCTTGAAAAATACTTCCGCTGCGCTTGGTCAATTTCATAATTTTTG
TGTTGGAGAAACACAACTCAACAAATGGGATGAATTCTTGACAGACATTG
GTCTTTCTGTAATTGAGAAAGTCCCCTCGAGAATTCTTTTTAATTGTGTT
TTGAATTATATCCTAAAAGAAACTATATCCTTCCATAAACCAAAGGAAGA
TGCTCCCAAAATCGACTACAATTTATCAAAAGATGAGGAAGAATCTTTGT
ACTACGTGGCTGGGTATCTTGTTTTCTCGATTAGAAAAAACACTAAAACC
AAAACTGAGCAGGGAAAAACAATCCATAGATTGTTAAATACATGGGGATC
AAAGAAAGACGAAGAATTTCAAGACCTCTCTCTTAATGAATATACAAAGG
CATGGGTTGATCAAGTGAATCGTGGAGGGCTATTTAAAGTCAATGGCCAA
TTTTATGATTTGGTTGTCATTATCGAAAAAGTAGCTCGATCCATATTAAA
TCTGAGTTTATTTGTAACATATTGTGGAGAAAGTATTCGAATAGTACTAC
GTGAAGCTTTTGAAAATAGTGAGGATGTGATAAAGGCATGGAAATTACTT
ACTTCAGATGTTGCTAATGTTAAAATCAAAGATAAACTTCTACAGTTGCT
ATTAAATAAATGGATTAATGTTAGAGCAAACGCATTCATCAAAGTCTGGC
TCCAACAGTATAAGTGGAATCAGTCGAAGAAAGGAGAGGCAGTCACCGAG
CAAGGAGAGCCATCTTTACGCAAATCTTTGGGAAAAAGTAAAAAACTTGG
GAAAAGACTATTGACACCAATAAAACCATCCAGCCCAAGGAAAACTAAAA
GCAGGACAGTGAGAGCAGCTGCAAAAAAACTTGCTACAGCAAAAGCTGTA
AAACGCAAGATTGCTACCAAGACCTAAATCAAGTTGAAAATGGTACTGAT
GCTAAAAATGGTGGATCAAACGAAAACGTTGCAGTAAATGTTGAGAAAGA
GAATGCGACTTCACCAATCTCCCCACGAAAATTACAAAATGGCGTCGTAT
GAAAATCTGTTAGATGAAGAAAGTGGGGAAAGTGATATTGATTTTGATGA
AAGTGATTTAGAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGC
TTATTGTCACAGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTA
CCACTACAGCGAATACCAACATTAGTGTTTGTTGATGAGACAGATACTAC
TGTCTGTGTCTTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAA
CAGATTTCACTGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTG
GCATTAGTCACAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAA
TACTGCTACTTCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTG
GCACGTCATCACTAGAATGTCCATTCTGCTTCAAAAAATACAAATCCAAA
CACTGGTACAAGTCCCATGTGGAAAAATGTGTTCAAAAATAATTCCTGAC
ACACGGAAATGATCTGTTGGACAAGGCCCTGCAATCTGTTATTGATGATC
CAATATACCGAATCTGTGAACCGGGATCATCTACTTTTGCTCTCGCCAAA
GAGATCAAGGAGTCAACGTCATCTGTTATTAAAGCAACTTATCAGAAACA
CCTTCTACAAAGTATTTTCAAGATTGTCAGAGACCCAACAACTTTCTTGA
AAAATACTTCCGCTGCGCTTGGTCAATTTCATAATTTTTGTGTTGGAGAA
ACACAACTCAACAAATGGGATGAATTCTTGACAGACATTGGTCTTTCTGT
AATTGAGAAAGTCCCCTCGAGAATTCTTTTTAATTGTGTTTTGAATTATA
TCCTAAAAGAAACTATATCCTTCCATAAACCAAAGGAAGATGCTCCCAAA
ATCGACTACAATTTATCAAAAGATGAGGAAGAATCTTTGTACTACGTGGC
TGGGTATCTTGTTTTCTCGATTAGAAAAAACACTAAAACCAAAACTGAGC
AGGGAAAAACAATCCATAGATTGTTAAATACATGGGGATCAAAGAAAGAC
GAAGAATTTCAAGACCTCTCTCTTAATGAATATACAAAGGCATGGGTTGA
TCAAGTGAATCGTGGAGGGCTATTTAAAGTCAATGGCCAATTTTATGATT
TGGTTGTCATTATCGAAAAAGTAGCTCGATCCATATTAAATCTGAGTTTA
TTTGTAACATATTGTGGAGAAAGTATTCGAATAGTACTACGTGAAGCTTT
TGAAAATAGTGAGGATGTGATAAAGGCATGGAAATTACTTACTTCAGATG
TTGCTAATGTTAAAATCAAAGATAAACTTCTACAGTTGCTATTAAATAAA
TGGATTAATGTTAGAGCAAACGCATTCATCAAAGTCTGGCTCCAACAGTA
TAAGTGGAATCAGTCGAAGAAAGGAGAGGCAGTCACCGAGCAAGGAGAGC
CATCTTTACGCAAATCTTTGGGAAAAAGTAAAAAACTTGGGAAAAGACTA
TTGACACCAATAAAACCATCCAGCCCAAGGAAAACTAAAAGCAGGACAGT
GAGAGCAGCTGCAAAAAAACTTGCTACAGCAAAAGCTGTAAAACGCAAGA
TTGCTACCAAGACCTAAATCAAGTTGAAAATGGTACTGATGCTAAAAATG
GTGGATCAAACGAAAACGTTGCAGTAAATGTTGAGAAAGAGAATGCGACT
TCACCAATCTCCCCACGAAAATTACAAAATGGCGTCGTATGAAAATCTGT
TAGATGAAGAAAGTGGGGAAAGTGATATTGATTTTGATGAAAGTGATTTA
GAAGATTCTGTTTTTGGTGAAGATGAATTTGTGGAGGAGCTTATTGTCAC
AGAAGATGATCTTCCTGAAAATTGTGATGAAAACTACCTACCACTACAGC
GAATACCAACATTAGTGTTTGTTGATGAGACAGATACTACTGTCTGTGTC
TTTGGAGATGATGGGCCTCTTAATACAGACGAACCCAAAACAGATTTCAC
TGTTTCAGCTAATGATGATTTGGATGATGAAACTTTTTTGGCATTAGTCA
CAAATGAGCCTTCAGTGAGCCAACTCCAGCAGCCACAAAATACTGCTACT
TCTACAACTGCTACTTCTGCTGGTACTTCTACAACTGCTGGCACGTCATC
ACTAGAATGTCCATTCTGCTTCAAAAAATACAAATCCAAACACTGGTACA
AGTCCCATGTGGAAAAATGTGTTCAAAAATAATTCCTGACACACGGAAAT
GATCTGTTGGACAAGGCCCTGCAATCTGTTATTGATGATCCAATATACCG
AATCTGTGAACCGGGATCATCTACTTTTGCTCTCGCCAAAGAGATCAAGG
AGTCAACGTCATCTGTTATTAAAGCAACTTATCAGAAACACCTTCTACAA
AGTATTTTCAAGATTGTCAGAGACCCAACAACTTTCTTGAAAAATACTTC
CGCTGCGCTTGGTCAATTTCATAATTTTTGTGTTGGAGAAACACAACTCA
ACAAATGGGATGAATTCTTGACAGACATTGGTCTTTCTGTAATTGAGAAA
GTCCCCTCGAGAATTCTTTTTAATTGTGTTTTGAATTATATCCTAAAAGA
AACTATATCCTTCCATAAACCAAAGGAAGATGCTCCCAAAATCGACTACA
ATTTATCAAAAGATGAGGAAGAATCTTTGTACTACGTGGCTGGGTATCTT
GTTTTCTCGATTAGAAAAAACACTAAAACCAAAACTGAGCAGGGAAAAAC
AATCCATAGATTGTTAAATACATGGGGATCAAAGAAAGACGAAGAATTTC
AAGACCTCTCTCTTAATGAATATACAAAGGCATGGGTTGATCAAGTGAAT
CGTGGAGGGCTATTTAAAGTCAATGGCCAATTTTATGATTTGGTTGTCAT
TATCGAAAAAGTAGCTCGATCCATATTAAATCTGAGTTTATTTGTAACAT
ATTGTGGAGAAAGTATTCGAATAGTACTACGTGAAGCTTTTGAAAATAGT
GAGGATGTGATAAAGGCATGGAAATTACTTACTTCAGATGTTGCTAATGT
TAAAATCAAAGATAAACTTCTACAGTTGCTATTAAATAAATGGATTAATG
TTAGAGCAAACGCATTCATCAAAGTCTGGCTCCAACAGTATAAGTGGAAT
CAGTCGAAGAAAGGAGAGGCAGTCACCGAGCAAGGAGAGCCATCTTTACG
CAAATCTTTGGGAAAAAGTAAAAAACTTGGGAAAAGACTATTGACACCAA
TAAAACCATCCAGCCCAAGGAAAACTAAAAGCAGGACAGTGAGAGCAGCT
GCAAAAAAACTTGCTACAGCAAAAGCTGTAAAACGCAAGATTGCTACCAA
GACCTAAATCAAGTTGAAAATGGTACTGATGCTAAAAATGGTGGATCAAA
CGAAAACGTTGCAGTAAATGTTGAGAAAGAGAATGCGACTTCACCAATCT
CCCCACGAAAATTACAAAATGGCGTCGTATGAAAATCTGTTAGATGAAGA
AAGTGGGGAAAGTGATATTGATTTTGATGAAAGTGATTTAGAAGATTCTG
TTTTTGGTGAAGATGAATTTGTGGAGGAGCTTATTGTCACAGAAGATGAT
CTTCCTGAAAATTGTGATGAAAACTACCTACCACTACAGCGAATACCAAC
ATTAGTGTTTGTTGATGAGACAGATACTACTGTCTGTGTCTTTGGAGATG
ATGGGCCTCTTAATACAGACGAACCCAAAACAGATTTCACTGTTTCAGCT
AATGATGATTTGGATGATGAAACTTTTTTGGCATTAGTCACAAATGAGCC
TTCAGTGAGCCAACTCCAGCAGCCACAAAATACTGCTACTTCTACAACTG
CTACTTCTGCTGGTACTTCTACAACTGCTGGCACGTCATCACTAGAATGT
CCATTCTGCTTCAAAAAATACAAATCCAAACACTGGTACAAGTCCCATGT
GGAAAAATGTGTTCAAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003508XLOC_003508Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006144-proteinTCONS_00006144-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006144-exon-sc0000063-1575043694:48747..49282TCONS_00006144-exon-sc0000063-1575043694:48747..49282Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1575043694:47800..47877TCONS_00006144-exon-sc0000063-1575043694:47800..47877Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1575043694:46185..47516TCONS_00006144-exon-sc0000063-1575043694:46185..47516Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1510915933:48747..49282TCONS_00006144-exon-sc0000063-1510915933:48747..49282Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1510915933:47800..47877TCONS_00006144-exon-sc0000063-1510915933:47800..47877Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1510915933:46185..47516TCONS_00006144-exon-sc0000063-1510915933:46185..47516Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1491911889:48747..49282TCONS_00006144-exon-sc0000063-1491911889:48747..49282Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1491911889:47800..47877TCONS_00006144-exon-sc0000063-1491911889:47800..47877Clytia hemisphaericaexon
TCONS_00006144-exon-sc0000063-1491911889:46185..47516TCONS_00006144-exon-sc0000063-1491911889:46185..47516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:46185..49282 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0398346	0.0462518	0.0452502	0.35807	0.0870622	0.0262592	0.0737506	0.0172115	0.0426385	0.103465	0	0.0271677	0.0282139	0.0347935	0.0373388	0.0459983	0.0157156	0.0217119	0.0681599	0.0197478	0.0288968	0.0468372	0.0425818	0	0	0	0	0.0226698	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006144 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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