TCONS_00006112 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006112
Unique NameTCONS_00006112
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length174

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006112 ID=TCONS_00006112|Name=TCONS_00006112|organism=Clytia hemisphaerica|type=transcript|length=174bp
aaaatttttaacaagAAACGGGAGTAGTGATGATAGAACAGTGTTTCGAT
CAGAGcacattttattttagtttagttgGATCACAGAAAACTTGTTCTGA
ATAACCTCTTTATGTACATAGTTTTCATTTAAACGTTGATTTTGATAGAT
AGTAATAATGGTCAGCAAATTGGC
Run BLAST on NCBI

transcript from alignment at sc0000062:690403..690576

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006112 ID=TCONS_00006112|Name=TCONS_00006112|organism=Clytia hemisphaerica|type=transcript|length=174bp|location=Sequence derived from alignment at sc0000062:690403..690576 (Clytia hemisphaerica)
GCCAATTTGCTGACCATTATTACTATCTATCAAAATCAACGTTTAAATGA
AAACTATGTACATAAAGAGGTTATTCAGAACAAGTTTTCTGTGATCcaac
taaactaaaataaaatgtgCTCTGATCGAAACACTGTTCTATCATCACTA
CTCCCGTTTcttgttaaaaatttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003487XLOC_003487Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006112-exon-sc0000062-1491911889:690403..690576TCONS_00006112-exon-sc0000062-1491911889:690403..690576Clytia hemisphaericaexon
TCONS_00006112-exon-sc0000062-1510915933:690403..690576TCONS_00006112-exon-sc0000062-1510915933:690403..690576Clytia hemisphaericaexon
TCONS_00006112-exon-sc0000062-1575043694:690403..690576TCONS_00006112-exon-sc0000062-1575043694:690403..690576Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:690403..690576 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006112 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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