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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006091 ID=TCONS_00006091|Name=TCONS_00006091|organism=Clytia hemisphaerica|type=transcript|length=751bp
GGAACACTTCCGTAAAGTCACAAAATGTGCAAAAATGTAAAACAAAAAGA
TATaatacaaagatttgaaaaatgtatGTGAATAAGTATTTTGTGTAATA
TATAATGTAcattttttgttatttaattAAGTCGAGGTGTTTTTACTGAT
CTTTCATCGTAATTATATCCAGCGTTGTAATCACGTTTTCGTTTACCGGC
TCTTTTGGATTCTTTAAATGATTCTGCGCGAGCTTTATCGTCCATTGAAA
TGATGTTTGCCAGATTTGAGGTTGATGGAAAAAATGGCAATGGGTTCAAA
TCAGCCTTGTCATTTTTCTCGTTTTCCGGAGATTCTGATGGAATACCGTT
AGCCAAGACTTGGAAATATCTTTGATAAGATTTTCGGTTGCGTCGTTTTT
GACGTCGGTGtggttttccaaatctttgagtgttttgagagtttgtggGG
GAGAGCAAATCATcaccactttcactttcgtggTAATCACGTTTTCGTTT
ACCGGCTCTTTTGGATTCTTTAAATGATTCTGTGCGAGCTTTATCGTCCA
TTGAAATGATGTTTGCCAGATTTGAGGTTGATGGAAAGAATGGTAATGGG
CTCAATTCACTCTTTTCACTTTCCTCGTTATCTGGAGATTCCGCAGGAAT
ACCGTTAGCCAAGACTTGGAAATATCGTTGATAAGGTTTTCGGTTGCGTC
GTTTTCGACGTCGATGtgattttccaaatctttgagtgttttgagagttt
g Run BLAST on NCBI protein sequence of TCONS_00006091-protein >TCONS_00006091-protein ID=TCONS_00006091-protein|Name=TCONS_00006091-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
NSQNTQRFGKSHRRRKRRNRKPYQRYFQVLANGIPAESPDNEESEKSELS
PLPFFPSTSNLANIISMDDKARTESFKESKRAGKRKRDYHESESGDDLLS
PTNSQNTQRFGKPHRRQKRRNRKSYQRYFQVLANGIPSESPENEKNDKAD
LNPLPFFPSTSNLANIISMDDKARAESFKESKRAGKRKRDYNAGYNYDER
SVKTPRLN Run BLAST on NCBI transcript from alignment at sc0000062:105457..106207 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006091 ID=TCONS_00006091|Name=TCONS_00006091|organism=Clytia hemisphaerica|type=transcript|length=751bp|location=Sequence derived from alignment at sc0000062:105457..106207 (Clytia hemisphaerica)
caaactctcaaaacactcaaagatttggaaaatcaCATCGACGTCGAAAA
CGACGCAACCGAAAACCTTATCAACGATATTTCCAAGTCTTGGCTAACGG
TATTCCTGCGGAATCTCCAGATAACGAGGAAAGTGAAAAGAGTGAATTGA
GCCCATTACCATTCTTTCCATCAACCTCAAATCTGGCAAACATCATTTCA
ATGGACGATAAAGCTCGCACAGAATCATTTAAAGAATCCAAAAGAGCCGG
TAAACGAAAACGTGATTAccacgaaagtgaaagtggtgATGATTTGCTCT
CCCccacaaactctcaaaacactcaaagatttggaaaaccaCACCGACGT
CAAAAACGACGCAACCGAAAATCTTATCAAAGATATTTCCAAGTCTTGGC
TAACGGTATTCCATCAGAATCTCCGGAAAACGAGAAAAATGACAAGGCTG
ATTTGAACCCATTGCCATTTTTTCCATCAACCTCAAATCTGGCAAACATC
ATTTCAATGGACGATAAAGCTCGCGCAGAATCATTTAAAGAATCCAAAAG
AGCCGGTAAACGAAAACGTGATTACAACGCTGGATATAATTACGATGAAA
GATCAGTAAAAACACCTCGACTTaattaaataacaaaaaatgTACATTAT
ATATTACACAAAATACTTATTCACatacatttttcaaatctttgtattAT
ATCTTTTTGTTTTACATTTTTGCACATTTTGTGACTTTACGGAAGTGTTC
C Coding sequence (CDS) from alignment at sc0000062:105457..106207 >TCONS_00006091 ID=TCONS_00006091|Name=TCONS_00006091|organism=Clytia hemisphaerica|type=CDS|length=627bp|location=Sequence derived from alignment at sc0000062:105457..106207 (Clytia hemisphaerica)
aactctcaaaacactcaaagatttggaaaatcaCATCGACGTCGAAAACG
ACGCAACCGAAAACCTTATCAACGATATTTCCAAGTCTTGGCTAACGGTA
TTCCTGCGGAATCTCCAGATAACGAGGAAAGTGAAAAGAGTGAATTGAGC
CCATTACCATTCTTTCCATCAACCTCAAATCTGGCAAACATCATTTCAAT
GGACGATAAAGCTCGCACAGAATCATTTAAAGAATCCAAAAGAGCCGGTA
AACGAAAACGTGATTAccacgaaagtgaaagtggtgATGATTTGCTCTCC
CccacaaactctcaaaacactcaaagatttggaaaaccaCACCGACGTCA
AAAACGACGCAACCGAAAATCTTATCAAAGATATTTCCAAGTCTTGGCTA
ACGGTATTCCATCAGAATCTCCGGAAAACGAGAAAAATGACAAGGCTGAT
TTGAACCCATTGCCATTTTTTCCATCAACCTCAAATCTGGCAAACATCAT
TTCAATGGACGATAAAGCTCGCGCAGAATCATTTAAAGAATCCAAAAGAG
CCGGTAAACGAAAACGTGATTACAACGCTGGATATAATTACGATGAAAGA
TCAGTAAAAACACCTCGACTTaattaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006091-exon-sc0000062-1491911889:105457..106207 | TCONS_00006091-exon-sc0000062-1491911889:105457..106207 | Clytia hemisphaerica | exon |
| TCONS_00006091-exon-sc0000062-1510915933:105457..106207 | TCONS_00006091-exon-sc0000062-1510915933:105457..106207 | Clytia hemisphaerica | exon |
| TCONS_00006091-exon-sc0000062-1575043694:105457..106207 | TCONS_00006091-exon-sc0000062-1575043694:105457..106207 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062 | supercontig | sc0000062:105457..106207 . |
Blast
The following BLAST results are available for this feature:
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