TCONS_00006083 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006083
Unique NameTCONS_00006083
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1740

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006083 ID=TCONS_00006083|Name=TCONS_00006083|organism=Clytia hemisphaerica|type=transcript|length=1740bp
ttgacgtcacaagttttgaaaaaacaaacatgGTGATACCACACAAGGCG
AACACAAGACACCAACACATCGCTGCACAAATACTTTTACtgttttgtac
aaaaaatcacctCATCTCATGCTACCAAACGGAATTGAACCACCATTAAA
AATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTTACAGG
ATCtaacaaaatgtgaaaaagcatTATCCGTCCCTGGCAATTACCACGCT
AAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCTGAAAA
CAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTCAAATT
TCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTCCGACC
CGTCGAAACAATCCACATCCTTCTAAGaattttctaaCCTGGAGAATTCC
AACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAATATTTCCTTCT
TAAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAACGATTACTCT
GGTCGACGCGGAGAACGTTCTGCCAACGCTGTAGATGCAAAAATGCTTCT
GGAAATGACAAAAAGTTATAGTGGGGCTgaagcaaagaaaaaagaaaaca
agaagAAAGGAAGAGTAATTTTGAAAAGCGGAGAACCGTCTCAACACGCT
TTAACACTTCCCAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTTC
ACGTGGTCTTCCTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCT
TGAAAGAAGAATTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATCT
TCTAAAGATAAAGGTACAGTATCCAAAACACCAACTGTCGTCGCCGAGAT
AGAAGAAAGTTATATTCAAAAGGCTTTGGAAAAGGCTTTGAAACCAGATG
CTATTGAAGCGATTGAGGAATGGTTACAAGATGCTAATGAGGAAGAACGT
GAGATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTACAACG
ACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCACCGT
ATAGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCTACCTCCGACA
GTTATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGC
ACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTA
TGCCACATGACACGCCAGGAATTACAGAGCTGATCAACCCATTACATCCT
GGAGTTCTTGCACAAAAAGAAGAGCGTAAACGATTTGTGACCGCCGGAAG
ACGACGTCTCGTTCGACCAAAGAAGAAGTCACCCGAGGGAACAAAATCTT
CACTATTTCAAACaacgaaaaaagcaaaaagtcgCCATTTTACTATCCAT
CCTGAATGGTATTGAGCTGGTCTCAAAGCATTCATTCCACTACTTATCCT
AActatttttataaatagaataaaaacacatttttgaaaatatactcAAC
ATCAAAATTTAGGCTTTATTTATTATACTGTGTTTGTGTTAAAGATAACC
aattaaaaatcataaatcttGACTATATTCACTCCAGGAAGACAGTGTGT
TTCTCaacaaaatgggaaaaaattaattactttATGCTTTTTTCATAAGC
AAGTGTCTATACCCCTATaccaggctcgcattatgcttag
Run BLAST on NCBI

protein sequence of TCONS_00006083-protein

>TCONS_00006083-protein ID=TCONS_00006083-protein|Name=TCONS_00006083-protein|organism=Clytia hemisphaerica|type=polypeptide|length=448bp
MLPNGIEPPLKMLTNAQKIHATDRLLQDLTKCEKALSVPGNYHAKQRRRF
HDDSKLVFPENKTRKNREDFETHYNSNFQRYQPCRPRERPCSPTRRNNPH
PSKNFLTWRIPTRVFDYGKSKTANISFLNSNIDDSFQSFYNDYSGRRGER
SANAVDAKMLLEMTKSYSGAEAKKKENKKKGRVILKSGEPSQHALTLPSL
LRKSWSPSQSSRGLPGRSGKDALSPLFLKEELQPLFQSWYDAASSKDKGT
VSKTPTVVAEIEESYIQKALEKALKPDAIEAIEEWLQDANEEEREIAMQF
IQTILLASLQRQKLEKTAETQTKIMPPYRKNLTPLHRDQLLPPTVMKSKP
HHHTKACKVCARKNLEGALEHLQAVATMPHDTPGITELINPLHPGVLAQK
EERKRFVTAGRRRLVRPKKKSPEGTKSSLFQTTKKAKSRHFTIHPEWY
Run BLAST on NCBI

transcript from alignment at sc0000062:649561..655381-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006083 ID=TCONS_00006083|Name=TCONS_00006083|organism=Clytia hemisphaerica|type=transcript|length=5821bp|location=Sequence derived from alignment at sc0000062:649561..655381- (Clytia hemisphaerica)
TTGACGTCACAAGTTTTGAAAAAACAAACATGGTGATACCACACAAGGCG
AACACAAGACACCAACACATCGCTGCACAAATACTTTTACTGTTTTGTAC
AAAAAATCACCTCATCTCATGCTACCAAACGGAATTGAACCACCATTAAA
AATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTTACAGG
ATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATTACCACGCT
AAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCTGAAAA
CAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTCAAATT
TCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTCCGACC
CGTCGAAACAATCCACATCCTTCTAAGGTAACTTCTATTCTTTTCAACAC
GTTAATACCCATTGAGTACCAAGCCGAATCTTCAACATTTCCCAATCAAG
TTAAAGTGAAGCTTTAAAATTGAGCTGCATTTCGACTGACAGATTAAATC
TAGCACTTTCTTTGTTCTCGCGTTTTACATTTTTCAAATTCTGGTGGTCA
ATGGTACTTCTATTATCCAGCGTTCGTATGAAACAACTTATGAAGAAAAT
GAGTGCGGCTTCCAATTGCACAAAGGAGATTCGACTCTAGCCTTAAGCCG
TACCTTATTGGTATACAGTGGACTCCCGCTAATTCAAATTTCTATTATTC
GCACCTTTCTATATAAATTCGAACTAATTTTCGATCCCCGTCAATAGGAA
AAACTCGGAAAATATTCTATAATTCAAATCTCTTTGTTATTTGGCAAAAT
GGATAAGATTTACAGATGATAATGACATGTTAATGAAAAATAACGGTGAT
ACGTATACGCTTGCCGTTTCAATGATTCTTGATTCGATTCCCGATCCCAT
GCAACTCTCAGCACAATGAGAGTAGGTTTTGCGCTCCACAATTGCAATCG
ATAATCTAACTTGATTTCTTTTTAGAATTTTCTAACCTGGAGAANTAACA
CGTTAATACCATTGAGTACCAAGCCGAATCTTCAACTTTTCCCAATCAAG
AAAAAGTGAAGCCTTAAAATTGAGCTGCATTTCGACTGACAGATTAAATC
TAGCACTTTCTTTGTTCTCTCGCGTTTTACGTTTTTCAAATTCTGGTGGT
CAATGGTACATTCTATTAGCCAGCGTTCGTATAAAACAACTTATGAAGAA
AATGAGTTGCTTCCAATTGTACAAAGGAGATTCGACTCTAGCCTTAAGCC
GTACCTTATTGGTATACAGTGGACTCCCGCTAATTCGAATTTCTATTATT
CGCACCTTTCTATATAAATTCGAACTAATTTTCGATCCCCGTCAATAGGA
AAAACTCGGAAAATATTCTATAATTCAAATCTCTTTCTTATTTGGCAAAA
TGGATAAGATTTACAGATGATAATGACATTTTAATGAAAAATAACGGTGA
TACGGTTACGCTTGCCGTTTTAATGATTCTTGATTCGATTCCCGATCCCA
TGCAACTCTCAGCACAATGAGAGTAGGTTTTGCGCTCCACAATTGCAATC
GATAATCTAACTTGATTTCTTTTTAGAATTTTCTAACCTGGAGAATTCCA
ACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAATATTTCCTTCTT
AAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAACGATTACTCTG
GTCGACGCGGAGGTTTGTACATTTAACATTCAATTCTTTCCATCATTTGA
TATTCTTGATCTTTATAATGTTTGCCTACTTGATCGCTTTGACTCTCTTA
TGCTGTAACTGTTATTGGGGCTTGATTTTTATAAGAGCTTACACCTGAAG
CTCAAGAAGTATAGGTATTAAAAAAAAAGAATCTTATCAACTTTTTGAGA
ATCTCACCGACTTGAAAAGGTATTCAATCAACAGTACCTTGAGGCTTGAT
AAAAGTTGGGGCCTAGCTGGGAGACGTTTTTCCACTGCTACTTGTGTTTG
CCACAACAAACTTTTATTACTCCTGTTTCAGAACGTTCTGCCAACGCTGT
AGATGCAAAAATGCTTCTGGAAATGACAAAAAGTTATAGTGGGGCTGAAG
CAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTAATTTTGAAAAGCGGA
GAACCGTCTCAACACGCTTTAACACGTAAGTTCAATCATATCCCAATCCC
AAAGCAATACAGTGGTCGGATAATTCAGTTAAAATACAGCATCATTTTCA
TAACCATAATCTTTTCGAATTCGACCAATATGTAGGTTAATCTTGAGTGG
TGATTAAGAGTAAGAGTAGATGTAATACCTCATTGAAAAATAATTTATCA
CCTGATAGAAAAAATCCACGGGTGCGGCCCTTTTTTAATCGGAAATTGCC
CCTTTACCACTTTAAATGTGACTATACTTTATATTATTCTAAACAATTTT
TTTGCTTATCAAACAACAGAAGCTTGCTATTATTGCTGTCTAATTATCTC
CCATCTTTTTAACAATTCTAGTTCCCAGCCTCCTACGCAAATCATGGTCA
CCCAGTCAATCTTCACGTGGTCTTCCTGGAAGGTCTGGTAAAGATGCTTT
ATCCCCACTTTTCTTGAAAGAAGAATTACAGCCTCTCTTTCAATCATGGT
ACGATGCAGCATCTTCTAAAGGTATGTATATTCAACAATTTGATCCTACA
ATAAGGACTGTATAGGTAGTCAACTATAGAATTTAGAATTGTGATTCTGA
AATATGATCTGTTTTAAAAAGGTACTCATTCAATGACACAATGACAATTT
GATCTTACGATAGAGCTTTGGGTAGTATCCAAAACAAAAATTGCAGAATA
CCAATATGTCCTATCAATTATAGAATATAAAATTTTGATTCTGAAATATG
ATTTGATTTTAGATAAAGGTACAGTATCCAAAACACCAACTGTCGTCGCC
GAGATAGAAGAAAGTTATATTCAAAAGGTAATCTTTACTGATGATTGATG
ATTGATCCATTCGCTTTGAGTGTGCACTAAAGTTAGTTTTTTCTGTTGAC
ACCGATAACAAAAGTCTGTTATACGCTTTAAGTATAAAATTGATTTGCCA
TTCGCCAACCAATGCTTCAATTGCCTTCAAATATAACAAATTGTATGCCG
TTGAAAAGATAATTCAAAGCACTGTAATTTTTAACGACATGGTTTGGGTT
TTTTTCCAGTGTGATCGAAAAGTCGTGGATGATGCTTAAGATTTTACTGT
TCTTAAACGAAAGAAACAATCTTTGAAGACCCAATACCAAACTTGCAATA
AGTCCCTTAGTATTCTTTTTTACAATTCTCAGAGAGCTCACAAAGAAGTA
TGTTCCATCAGGGATTGGCATAAAAATGCTTAAATATTGATAGAAAGAAA
GCCATTTAGATTTTATTTAATCCTTCTTTTGATTTTTGCAGGCTTTGGAA
AAGGCTTTGAAACCAGATGCTATTGAAGCGATTGAGGAATGGTTACAAGA
TGCTAATGAGGAAGGTAAGTAATTTCATTATAACCCTGCTACAGCCTTCT
TCAAGGAGCCTTTTATACTCTGATTAATCTTTATAATAAGTCCCTATATA
ATATGCAAAATGGACAAAAGTATCGTTTACAGTATGGCCCTTGATGGTCA
GCTTCAAGAACATCACTGTCAACCGAGCTTAGTTACGTCTATGTCACATA
CGTGTCTCCTAAAAGGATTTCATATAAAAAAAATTCACCCACTATAACAT
TTTTAACTCATAGCTGTTTCAGTCCTCTAAATTAAGTCTTGCACTACAGA
ATTCTAAACTTTTCATGTCTGACTCATGTGTGTTTTACAATTCTTACTTA
GGCACGACGACTGGGCTATTCCGCGGGTAAATTGAAAGTCTTTAAAAGAC
TTTCAATTTACCCGCGGAATATTTAGAGCTAAAGAATTATCCAACTTAGC
TAGGTAGAACATCAACGTTCGGTCCGCCAAAGCATTTTCTTCCCTTAATC
TATTTTTTTCAAAAAGACGTAAAAAGACGCAAGAAAGAGCTCTTCAAGGC
TATTAGAAATTTAGGGCGTATAAAACGGGTTGCAGAGGAGTATCTTATAA
ATGTTTTAACATTCTTCATTCTTTTCGCTTAGAACGTGAGATTGCCATGC
AGTTTATCCAGACTATCTTATTGGCTTCGTTACAACGACAAAAGTTAGAA
AAAACGGCAGAAACACAAACCAAAATAATGCCACCGTATAGAAAAAATTT
AACACCCCTTCATCGTGACCAACTGCTACCTCCGACAGTTATGAAAAGTA
AACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGCACGTAAGAATTTG
GAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTATGCCACAGTAAGT
TTGGACTTTAAAAGTTATGGAGAAGTCTTTAATTCGTGTACTCTACTCCG
AATTTTTTCAAAATCTAATAAAAGAGGGATCCGAAAAATTGTACCTCCGA
AAACCCCGAAAAAGATAATCATTATAAGCCAAAAAAAAACAGGATATTTG
GAGCTATCGAGCTTGCGATTGCTGAAAATATTTTTGAAAATAAATAAACG
GGTGGTGATGGTTATTCGAGTAGTAGTCTGTCTATACCACAAAACATCGA
CAAATTGCTTTATCCTTCTGACGCTCCTTAACAACCATAAGGAAAACCAT
AACGAGCCTAACAGTTATTTGTTTCCTAAATAATCTTAGTGAAAAAAAAA
ACTTAAATAAAAACACCCTTCTTACAGACCCGGTGAGACCCCCTCTCACT
TGAATAATTGACCAAATATCGTCCCCAGTGGAAATTATAATCCGATTTTT
GCCCACGCTGAAAATAATCTCACTGCAAAATATTGTTTTTTTTTGTCTCC
GCTGAATGTTCTGACTTAAACTCCATGAGCCATAAAAACATGGGAATATC
AACCCCATTGAGTTTCAGTCCGTTTTTTAACCCACTGACTGAATAAATAT
CCTATCGGGTCTGTGAGAAGGGGATGTATGAGCGTACAAAGTTGAATTTT
TGGACCCATCTTTCCAGTGGAAAAGACAGAACCTGGTCTTATATTGGTAC
AGTGTAGTCTTGGGTAATGAAACAGATCGCACTTTTTATCAGTTATAACA
GTAAGGAAAAATTAAAATAATTCACCGTTAAAATTTGGCTGCAATGCTTC
AAAAACCAGTGTGAAAAACTAAGATTTTCCACCGAAAATGTGGTTGAGTT
TTTCCTGTGTTGAATAATCTTTACCTTTTCGTTTTTAGTGACACGCCAGG
AATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAG
AAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCA
AAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAA
AAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAGCTG
GTCTCAAAGCATTCATTCCACTACTTATCCTAACTATTTTTATAAATAGA
ATAAAAACACATTTTTGAAAATATACTCAACATCAAAATTTAGGCTTTAT
TTATTATACTGTGTTTGTGTTAAAGATAACCAATTAAAAATCATAAATCT
TGACTATATTCACTCCAGGAAGACAGTGTGTTTCTCAACAAAATGGGAAA
AAATTAATTACTTTATGCTTTTTTCATAAGCAAGTGTCTATACCCCTATA
CCAGGCTCGCATTATGCTTAG

Coding sequence (CDS) from alignment at sc0000062:649561..655381-

>TCONS_00006083 ID=TCONS_00006083|Name=TCONS_00006083|organism=Clytia hemisphaerica|type=CDS|length=10776bp|location=Sequence derived from alignment at sc0000062:649561..655381- (Clytia hemisphaerica)
TGACACGCCAGGAATTACAGAGCTGATCAACCCATTACATCCTGGAGTTC
TTGCACAAAAAGAAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGT
CTCGTTCGACCAAAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATT
TCAAACAACGAAAAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAAT
GGTATTGAAACGTGAGATTGCCATGCAGTTTATCCAGACTATCTTATTGG
CTTCGTTACAACGACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAA
ATAATGCCACCGTATAGAAAAAATTTAACACCCCTTCATCGTGACCAACT
GCTACCTCCGACAGTTATGAAAAGTAAACCTCATCACCATACTAAAGCTT
GTAAAGTTTGCGCACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAA
GCTGTTGCTACTATGCCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCT
ATTGAAGCGATTGAGGAATGGTTACAAGATGCTAATGAGGAAGATAAAGG
TACAGTATCCAAAACACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATA
TTCAAAAGTTCCCAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTT
CACGTGGTCTTCCTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTC
TTGAAAGAAGAATTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATC
TTCTAAAGAACGTTCTGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAA
TGACAAAAAGTTATAGTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAG
AAAGGAAGAGTAATTTTGAAAAGCGGAGAACCGTCTCAACACGCTTTAAC
ACAATTTTCTAACCTGGAGAATTCCAACGCGCGTATTTGACTATGGCAAA
TCAAAAACGGCCAATATTTCCTTCTTAAACTCGAATATTGATGATTCATT
CCAAAGCTTTTATAACGATTACTCTGGTCGACGCGGAGATGCTACCAAAC
GGAATTGAACCACCATTAAAAATGTTGACCAACGCTCAAAAAATACACGC
AACGGACCGTCTTTTACAGGATCTAACAAAATGTGAAAAAGCATTATCCG
TCCCTGGCAATTACCACGCTAAACAACGTCGTCGTTTTCATGATGATTCC
AAACTTGTCTTCCCTGAAAACAAAACGCGTAAGAATCGAGAGGACTTCGA
AACGCATTATAATTCAAATTTCCAACGCTATCAACCTTGTCGTCCTAGAG
AGCGGCCCTGTTCTCCGACCCGTCGAAACAATCCACATCCTTCTAAGTGA
CACGCCAGGAATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTG
CACAAAAAGAAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTC
GTTCGACCAAAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCA
AACAACGAAAAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGT
ATTGAAACGTGAGATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTT
CGTTACAACGACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATA
ATGCCACCGTATAGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCT
ACCTCCGACAGTTATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTA
AAGTTTGCGCACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCT
GTTGCTACTATGCCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATT
GAAGCGATTGAGGAATGGTTACAAGATGCTAATGAGGAAGATAAAGGTAC
AGTATCCAAAACACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATATTC
AAAAGTTCCCAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTTCAC
GTGGTCTTCCTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTG
AAAGAAGAATTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATCTTC
TAAAGAACGTTCTGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAATGA
CAAAAAGTTATAGTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAA
GGAAGAGTAATTTTGAAAAGCGGAGAACCGTCTCAACACGCTTTAACACA
ATTTTCTAACCTGGAGAATTCCAACGCGCGTATTTGACTATGGCAAATCA
AAAACGGCCAATATTTCCTTCTTAAACTCGAATATTGATGATTCATTCCA
AAGCTTTTATAACGATTACTCTGGTCGACGCGGAGATGCTACCAAACGGA
ATTGAACCACCATTAAAAATGTTGACCAACGCTCAAAAAATACACGCAAC
GGACCGTCTTTTACAGGATCTAACAAAATGTGAAAAAGCATTATCCGTCC
CTGGCAATTACCACGCTAAACAACGTCGTCGTTTTCATGATGATTCCAAA
CTTGTCTTCCCTGAAAACAAAACGCGTAAGAATCGAGAGGACTTCGAAAC
GCATTATAATTCAAATTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGC
GGCCCTGTTCTCCGACCCGTCGAAACAATCCACATCCTTCTAAGTGACAC
GCCAGGAATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCAC
AAAAAGAAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTT
CGACCAAAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAAC
AACGAAAAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATT
GAAACGTGAGATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGT
TACAACGACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATG
CCACCGTATAGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCTACC
TCCGACAGTTATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAG
TTTGCGCACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTT
GCTACTATGCCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAA
GCGATTGAGGAATGGTTACAAGATGCTAATGAGGAAGATAAAGGTACAGT
ATCCAAAACACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAA
AGTTCCCAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTTCACGTG
GTCTTCCTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAA
GAAGAATTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATCTTCTAA
AGAACGTTCTGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAATGACAA
AAAGTTATAGTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGA
AGAGTAATTTTGAAAAGCGGAGAACCGTCTCAACACGCTTTAACACAATT
TTCTAACCTGGAGAATTCCAACGCGCGTATTTGACTATGGCAAATCAAAA
ACGGCCAATATTTCCTTCTTAAACTCGAATATTGATGATTCATTCCAAAG
CTTTTATAACGATTACTCTGGTCGACGCGGAGATGCTACCAAACGGAATT
GAACCACCATTAAAAATGTTGACCAACGCTCAAAAAATACACGCAACGGA
CCGTCTTTTACAGGATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTG
GCAATTACCACGCTAAACAACGTCGTCGTTTTCATGATGATTCCAAACTT
GTCTTCCCTGAAAACAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCA
TTATAATTCAAATTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGC
CCTGTTCTCCGACCCGTCGAAACAATCCACATCCTTCTAAGTGACACGCC
AGGAATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAA
AAGAAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGA
CCAAAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAAC
GAAAAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAA
ACGTGAGATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTAC
AACGACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCA
CCGTATAGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCTACCTCC
GACAGTTATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTT
GCGCACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCT
ACTATGCCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAAGCG
ATTGAGGAATGGTTACAAGATGCTAATGAGGAAGATAAAGGTACAGTATC
CAAAACACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAAAGT
TCCCAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTTCACGTGGTC
TTCCTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAAGAA
GAATTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATCTTCTAAAGA
ACGTTCTGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAATGACAAAAA
GTTATAGTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGAAGA
GTAATTTTGAAAAGCGGAGAACCGTCTCAACACGCTTTAACACAATTTTC
TAACCTGGAGAATTCCAACGCGCGTATTTGACTATGGCAAATCAAAAACG
GCCAATATTTCCTTCTTAAACTCGAATATTGATGATTCATTCCAAAGCTT
TTATAACGATTACTCTGGTCGACGCGGAGATGCTACCAAACGGAATTGAA
CCACCATTAAAAATGTTGACCAACGCTCAAAAAATACACGCAACGGACCG
TCTTTTACAGGATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCA
ATTACCACGCTAAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTC
TTCCCTGAAAACAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTA
TAATTCAAATTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCT
GTTCTCCGACCCGTCGAAACAATCCACATCCTTCTAAGTGACACGCCAGG
AATTACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAG
AAGAGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCA
AAGAAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAA
AAAAGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAAACG
TGAGATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTACAAC
GACAAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCACCG
TATAGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCTACCTCCGAC
AGTTATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTTGCG
CACGTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACT
ATGCCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAAGCGATT
GAGGAATGGTTACAAGATGCTAATGAGGAAGATAAAGGTACAGTATCCAA
AACACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAAAGTTCC
CAGCCTCCTACGCAAATCATGGTCACCCAGTCAATCTTCACGTGGTCTTC
CTGGAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAAGAAGAA
TTACAGCCTCTCTTTCAATCATGGTACGATGCAGCATCTTCTAAAGAACG
TTCTGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAATGACAAAAAGTT
ATAGTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTA
ATTTTGAAAAGCGGAGAACCGTCTCAACACGCTTTAACACAATTTTCTAA
CCTGGAGAATTCCAACGCGCGTATTTGACTATGGCAAATCAAAAACGGCC
AATATTTCCTTCTTAAACTCGAATATTGATGATTCATTCCAAAGCTTTTA
TAACGATTACTCTGGTCGACGCGGAGATGCTACCAAACGGAATTGAACCA
CCATTAAAAATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCT
TTTACAGGATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATT
ACCACGCTAAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTC
CCTGAAAACAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAA
TTCAAATTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTT
CTCCGACCCGTCGAAACAATCCACATCCTTCTAAGTGACACGCCAGGAAT
TACAGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAGAAG
AGCGTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCAAAG
AAGAAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAAAAA
AGCAAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAAACGTGA
GATTGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTACAACGAC
AAAAGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCACCGTAT
AGAAAAAATTTAACACCCCTTCATCGTGACCAACTGCTACCTCCGACAGT
TATGAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGCAC
GTAAGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTATG
CCACAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAAGCGATTGAG
GAATGGTTACAAGATGCTAATGAGGAAGATAAAGGTACAGTATCCAAAAC
ACCAACTGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAAAGTTCCCAG
CCTCCTACGCAAATCATGGTCACCCAGTCAATCTTCACGTGGTCTTCCTG
GAAGGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAAGAAGAATTA
CAGCCTCTCTTTCAATCATGGTACGATGCAGCATCTTCTAAAGAACGTTC
TGCCAACGCTGTAGATGCAAAAATGCTTCTGGAAATGACAAAAAGTTATA
GTGGGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTAATT
TTGAAAAGCGGAGAACCGTCTCAACACGCTTTAACACAATTTTCTAACCT
GGAGAATTCCAACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAAT
ATTTCCTTCTTAAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAA
CGATTACTCTGGTCGACGCGGAGATGCTACCAAACGGAATTGAACCACCA
TTAAAAATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTT
ACAGGATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATTACC
ACGCTAAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCT
GAAAACAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTC
AAATTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTC
CGACCCGTCGAAACAATCCACATCCTTCTAAGTGACACGCCAGGAATTAC
AGAGCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAGAAGAGC
GTAAACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCAAAGAAG
AAGTCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAAAAAAGC
AAAAAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAAACGTGAGAT
TGCCATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTACAACGACAAA
AGTTAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCACCGTATAGA
AAAAATTTAACACCCCTTCATCGTGACCAACTGCTACCTCCGACAGTTAT
GAAAAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGCACGTA
AGAATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTATGCCA
CAGCTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAAGCGATTGAGGAA
TGGTTACAAGATGCTAATGAGGAAGATAAAGGTACAGTATCCAAAACACC
AACTGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAAAGTTCCCAGCCT
CCTACGCAAATCATGGTCACCCAGTCAATCTTCACGTGGTCTTCCTGGAA
GGTCTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAAGAAGAATTACAG
CCTCTCTTTCAATCATGGTACGATGCAGCATCTTCTAAAGAACGTTCTGC
CAACGCTGTAGATGCAAAAATGCTTCTGGAAATGACAAAAAGTTATAGTG
GGGCTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTAATTTTG
AAAAGCGGAGAACCGTCTCAACACGCTTTAACACAATTTTCTAACCTGGA
GAATTCCAACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAATATT
TCCTTCTTAAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAACGA
TTACTCTGGTCGACGCGGAGATGCTACCAAACGGAATTGAACCACCATTA
AAAATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTTACA
GGATCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATTACCACG
CTAAACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCTGAA
AACAAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTCAAA
TTTCCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTCCGA
CCCGTCGAAACAATCCACATCCTTCTAAGTGACACGCCAGGAATTACAGA
GCTGATCAACCCATTACATCCTGGAGTTCTTGCACAAAAAGAAGAGCGTA
AACGATTTGTGACCGCCGGAAGACGACGTCTCGTTCGACCAAAGAAGAAG
TCACCCGAGGGAACAAAATCTTCACTATTTCAAACAACGAAAAAAGCAAA
AAGTCGCCATTTTACTATCCATCCTGAATGGTATTGAAACGTGAGATTGC
CATGCAGTTTATCCAGACTATCTTATTGGCTTCGTTACAACGACAAAAGT
TAGAAAAAACGGCAGAAACACAAACCAAAATAATGCCACCGTATAGAAAA
AATTTAACACCCCTTCATCGTGACCAACTGCTACCTCCGACAGTTATGAA
AAGTAAACCTCATCACCATACTAAAGCTTGTAAAGTTTGCGCACGTAAGA
ATTTGGAAGGTGCTTTGGAACACTTACAAGCTGTTGCTACTATGCCACAG
CTTTGGAAAAGGCTTTGAAACCAGATGCTATTGAAGCGATTGAGGAATGG
TTACAAGATGCTAATGAGGAAGATAAAGGTACAGTATCCAAAACACCAAC
TGTCGTCGCCGAGATAGAAGAAAGTTATATTCAAAAGTTCCCAGCCTCCT
ACGCAAATCATGGTCACCCAGTCAATCTTCACGTGGTCTTCCTGGAAGGT
CTGGTAAAGATGCTTTATCCCCACTTTTCTTGAAAGAAGAATTACAGCCT
CTCTTTCAATCATGGTACGATGCAGCATCTTCTAAAGAACGTTCTGCCAA
CGCTGTAGATGCAAAAATGCTTCTGGAAATGACAAAAAGTTATAGTGGGG
CTGAAGCAAAGAAAAAAGAAAACAAGAAGAAAGGAAGAGTAATTTTGAAA
AGCGGAGAACCGTCTCAACACGCTTTAACACAATTTTCTAACCTGGAGAA
TTCCAACGCGCGTATTTGACTATGGCAAATCAAAAACGGCCAATATTTCC
TTCTTAAACTCGAATATTGATGATTCATTCCAAAGCTTTTATAACGATTA
CTCTGGTCGACGCGGAGATGCTACCAAACGGAATTGAACCACCATTAAAA
ATGTTGACCAACGCTCAAAAAATACACGCAACGGACCGTCTTTTACAGGA
TCTAACAAAATGTGAAAAAGCATTATCCGTCCCTGGCAATTACCACGCTA
AACAACGTCGTCGTTTTCATGATGATTCCAAACTTGTCTTCCCTGAAAAC
AAAACGCGTAAGAATCGAGAGGACTTCGAAACGCATTATAATTCAAATTT
CCAACGCTATCAACCTTGTCGTCCTAGAGAGCGGCCCTGTTCTCCGACCC
GTCGAAACAATCCACATCCTTCTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003459XLOC_003459Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006083-exon-sc0000062-1575043694:654955..655381TCONS_00006083-exon-sc0000062-1575043694:654955..655381Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:653620..653755TCONS_00006083-exon-sc0000062-1575043694:653620..653755Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:653157..653300TCONS_00006083-exon-sc0000062-1575043694:653157..653300Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:652661..652810TCONS_00006083-exon-sc0000062-1575043694:652661..652810Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:652355..652419TCONS_00006083-exon-sc0000062-1575043694:652355..652419Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:651818..651890TCONS_00006083-exon-sc0000062-1575043694:651818..651890Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:650938..651199TCONS_00006083-exon-sc0000062-1575043694:650938..651199Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1575043694:649561..650043TCONS_00006083-exon-sc0000062-1575043694:649561..650043Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:654955..655381TCONS_00006083-exon-sc0000062-1510915933:654955..655381Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:653620..653755TCONS_00006083-exon-sc0000062-1510915933:653620..653755Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:653157..653300TCONS_00006083-exon-sc0000062-1510915933:653157..653300Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:652661..652810TCONS_00006083-exon-sc0000062-1510915933:652661..652810Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:652355..652419TCONS_00006083-exon-sc0000062-1510915933:652355..652419Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:651818..651890TCONS_00006083-exon-sc0000062-1510915933:651818..651890Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:650938..651199TCONS_00006083-exon-sc0000062-1510915933:650938..651199Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1510915933:649561..650043TCONS_00006083-exon-sc0000062-1510915933:649561..650043Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:654955..655381TCONS_00006083-exon-sc0000062-1491911889:654955..655381Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:653620..653755TCONS_00006083-exon-sc0000062-1491911889:653620..653755Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:653157..653300TCONS_00006083-exon-sc0000062-1491911889:653157..653300Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:652661..652810TCONS_00006083-exon-sc0000062-1491911889:652661..652810Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:652355..652419TCONS_00006083-exon-sc0000062-1491911889:652355..652419Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:651818..651890TCONS_00006083-exon-sc0000062-1491911889:651818..651890Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:650938..651199TCONS_00006083-exon-sc0000062-1491911889:650938..651199Clytia hemisphaericaexon
TCONS_00006083-exon-sc0000062-1491911889:649561..650043TCONS_00006083-exon-sc0000062-1491911889:649561..650043Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006083-proteinTCONS_00006083-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:649561..655381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.347594	0.564931	0.244937	0.0770081	1.60452	1.11124	0.625641	0.716033	0.429602	0.507914	0.399114	0.41421	0.0924695	0.0373533	0.0153548	0.141209	0.223295	0.142641	0	0.051554	0.201644	0.0765149	0.185987	0.434801	8.53561	9.50356	0.185393	0.101732	0.120053	0.235843
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006083 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top