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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006079 ID=TCONS_00006079|Name=TCONS_00006079|organism=Clytia hemisphaerica|type=transcript|length=813bp
TACATAAGCGGGGTGAGTGGAAAGATTCTCTAAACTTAATTAGTGCCCCT
CACCCGCTTATTAGGTTCTTACTGAAATTCATATTCATTTATTTCTTTAA
GATAATGTATAGTAAAATATATGCTGCTACAACCAAAGGTGATATAAATA
TTctccaacaacaacaaacaaagtCAGGTAAAGCACCGCGATCGAAACTA
GCATTAACTGGACTTGCTATAACAGGAGGATTGGCTGTCGGTGTATCTTT
AGTGACATTCTCTTTTATATCACCTGCACTCCGTCGCATATGTCTTCCCT
TTGTACCTGCCACAGATAATCAAATCTCTAATGTATTGAAACTGTGTAAA
AAGAAACAAGGTGGAGGAGGGAGTTTAGTTGATCTTGGGAGTGGAGATGG
AAGGATTGTGTTTTCTGCTGCGAAGAATGGTTACCAGGCTACAGGGTATG
AGTTGAACCTTTGGTTAGTTCTATATTCAAAAATATCAGCAAGGATGCAG
AATTTATGGCCAAATGCGAAATTTGAGCGAAAAGACTTATGGAAAGTTGA
CTATAAACAATTTGATAATATTGTGATTTTTGGTGTTGCTGACATGATGA
ATGAGTTGTCAATTAAACTAGAAAATGATATGGATGATAATTCTCGTGTG
ATTGCTTGCCGTTTTGAAATACCTCGATGGAAACCTGTCAAAGAAATTCA
AGATGGTATCGATTCAACTTGGTTATACACTAGAGAAAGTTTCAACAGAA
CGCAGCCTACTGAAGATACTAGACTCAGCACTCCATCTTGCAGACAGTTC
TAAAGAGACGGGG Run BLAST on NCBI protein sequence of TCONS_00006079-protein >TCONS_00006079-protein ID=TCONS_00006079-protein|Name=TCONS_00006079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
HKRGEWKDSLNLISAPHPLIRFLLKFIFIYFFKIMYSKIYAATTKGDINI
LQQQQTKSGKAPRSKLALTGLAITGGLAVGVSLVTFSFISPALRRICLPF
VPATDNQISNVLKLCKKKQGGGGSLVDLGSGDGRIVFSAAKNGYQATGYE
LNLWLVLYSKISARMQNLWPNAKFERKDLWKVDYKQFDNIVIFGVADMMN
ELSIKLENDMDDNSRVIACRFEIPRWKPVKEIQDGIDSTWLYTRESFNRT
QPTEDTRLSTPSCRQF Run BLAST on NCBI transcript from alignment at sc0000062:630444..638268- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006079 ID=TCONS_00006079|Name=TCONS_00006079|organism=Clytia hemisphaerica|type=transcript|length=7825bp|location=Sequence derived from alignment at sc0000062:630444..638268- (Clytia hemisphaerica)
TACATAAGCGGGGTGAGTGGAAAGATTCTCTAAACTTAATTAGTGCCCCT
CACCCGCTTATTAGGTTCTTACTGAAATTCATATTCATTTATTTCTTTAA
GATAATGTATAGTAAAATATATGCTGCTACAACCAAAGGTGATATAAATA
TTCTCCAACAACAACAAACAAAGTCAGGTAAAGCACCGCGATCGAAACTA
GCATTAACTGGACTTGCTATAACAGGAGGATTGGCTGTCGGTGTATCTTT
AGTGACATTCTCTTTTATATCACCTGCACTCCGTCGCATATGTCTTCCCT
TTGTACCTGCCACAGATAATCAAATCTCTAATGTATTGAAACTGTGTAAA
AAGAAACAAGGTGGAGGAGGGAGTTTAGTTGATCTTGGGAGTGGAGATGG
AAGGATTGTGTTTTCTGCTGCGAAGAATGGTTACCAGGCTACAGGGTATG
AGTTGAACCTTTGGTTAGTTCTATATTCAAAAATATCAGCAAGGATGCAG
AATTTATGGCCAAATGCGAAATTTGAGCGAAAAGACTTATGGAAAGTTGA
CTATAAACAATTTGATAATATTGTGATTTTTGGTGTTGCTGACATGATGA
ATGAGTTGTCAATTAAACTAGAAAATGATATGGATGATAATTCTCGTGTG
ATTGCTTGCCGTTTTGAAATACCTCGATGGAAACCTGTCAAAGAAATTCA
AGATGGTATCGATTCAACTTGGTTATACACTAGAGAAAGTTTCAACAGAA
CGCAGCCTACTGAAGATACTAGTGAGTGATTATTGTACCATTTTTTTATT
TTTATTGTAGAAGCTATGACCAAAAAACTGATACTGAAACAACTTAAATT
TGATCTTTTTGGTTGGTGGTTTTTCGAAAACCTATTTTAGACACGTTTGT
TCGATTTTCAATCGTTCCGACAGGGGTTATAGCCATCTCCTACCATCCCC
TATCGAATTTGGGTCTCACTTTGCTATAGGACGTTTCAGATTCCCTGGTA
TTTTGTCATTAACACACAGCACTCGCGGGTGATTTGCGCAAAATTGTTCC
AAAATGAAAAATGACACGGTTTTCCAGATTATTTAAGCTCGCTGTGAGAT
AAGTAAACTTTTTTTGGCCGAAAATTAGTGTAATGGGGTTGTTTTGCTGG
AACAAGCAAAAAAAAATTCCAGGTAAATTATCTTTAATGGGAAATTTTAG
TTTAGCAATATATGTAGTTTTTAAACGTTCAGTGCGCCTTTCTTGACAAA
TTTACATACCCTGATATGCATTTTTCTGTCAGCATACTACTAATAATTAA
TTCAGAAACAAAATTTTATCTCATATTTTCAGTTTGTGAAAGCCTATGCA
CCTTTATCCCAGCAGTCCAATTTTTTGGCCCGTACGCGACAACTCCAATT
ACACTGTTCAAAATATCAATGGGGAAAAAAATTCTGCCCAAAATTTGTTT
TTTTTTCTTTCAGGTTACTACCTATGTATGTGTTATACTTTTCAGACACT
ATTGTCTGAAAATAAATCATTTTTTTAACCAAATTTGCGCTGAGACGCTC
ATCATTCATCATGCTGAAAAGAAATCACACTTGTCCTCTACGTGACAGAG
TGAAATACTCAAAATCAGTAATATGTACGAAAAACGTTTTGTATTCCCTG
AAGTCACTCTTATGTATGTATCAAAATGTATTAAAAGTTTTACCATCATA
CGTATTTTTCTTTTTCGGGATATTTCACACTTTGTCCTGTACGTGACAAA
ATTTGAAAATCCTTAAATTTAACAAGAAAATTCTATTTTGACCAAATATT
TTGCACTGATTGGTAAATCTACACCATATTGCTTCTTTAAAATATCGAAG
ATTTTTTAAGTTAGTTGTATAAATGAAAGTTATTGAGGGTTGAAGAGTGA
TTTTTCCCCTATTCAAAAACAATAGTGTATACCGCAGGATACCCTCATAG
ACTCTGATAGACTTATTTTAGAATGAAAAAGTTAATTATTTCTGAAAGTC
AAAAGGTTAGTGAAGATAATTCCAAAAAGTTATTTGATTCTGAATTACAA
TTTTCTCTTCAAATTGAGAGGCTGTTAACATTACATTAAAAACAGGAAAA
TAGCTTGTAAAGTGTGGTGAAACTATTTTTTTCTTAAAGCCTGACCCCTA
GAGGATACAAAAACACCAAAAGAAGTTAAATTTTTGAGAAAAAAAATTTT
GAGATTTTTTTCAGCCTTTTGAAACAATTTCATGCAAATCACCCTCGCAT
CAAGTACATAGCAGAAAAGAGTAGTAACGTCACTTTTTCTATTGGGTAAG
TGACGTATTTGGTGGATAATTTTAAAAGTTCTCAGAAGAGTTCCAGTGGT
GCATATCATGAATACAGTCCTCAGAACTCGAATGGTCCAATGAACTTATA
TTTGCGAATTTTTCTGAAAATCACTAAATTCGCCAATTTTAATCCCGCCA
AAATTAACCCACTTAAGGTTTGTTTTATATATTTATGCGGGACATATATT
ATTATCTTTCCAACAATACCTTACGACATTAGACATCTCGTTGGAATGGT
ATATCTGAGTGGTACAAAAAAGTTTTCTAGAAATTTATAATGTTTCTTTC
ATCAAATTATAATTACAAAAATACCTATTTCCAATTTATACAATTTATTA
AACCAAAATATCATATGAAATTTTATTCCAAATGTTGATGCCGTTTTCGA
ATTCTGTATATGTCTCGACAATTTTCTTGAACCGAAGCTCTTCGAGTTTA
ATTTTCTCTGTTAGTTTTACTTAATAGACCTTATCAGAGTTTTTGATTTT
TCTAAAAAAGCGATGCATTGTGGGATTGTTTCAAGTGTATTACATTAGAA
TTCCCTCGAGGAATTCCTAGAGATTTATATTGTAATACACTTAAAACAAT
CCCACAATGCATCGCTTTTTTAGAAAAAAAAACTCCGATAAGGTCTATTT
ATTCAACGTTATTTCATAATCGTTTTACGCGATCATACATGGTACGGTCA
AGCTTCGAAATTTATTGCATCTTATTAAAAGACATCGAGCTTGACAACTT
TGGAATTGAAGGCTCTACTACCGCTCTATATGGTACCATAAATGATCGAA
ATCGTNCTTTGGAATTGAAAGCTCTACTACCGCTCTATATGGTACCATAA
ATGATCGAAATCGTTTTTCTTTCTCATTATAAACCTTCATACTTTCAACA
TCTTCCCAACAATCAGATGCATTTATCAATATCAAGATTTCTCCTTCTTT
TTGGACGATAGTAAACTTTTCATCAAATGCTTTTTAGCAGCACTCGGTTT
CCGCGACAAACTCGTAGTAGCTGTTAATTTACTATGTCCATTTGAATCAA
TTCGGCCGTTGTCCGTTATTATTATTTCCTCGATCAAACCTTTAATGGTC
CCATCAATATTTATCGTACACGCTACAGAAATTTCCCGCCATAAACACCC
ATGAGCCTTTGCGAAGGCTTCTTGTTCTTTAGCATGTACTTTCCGCGCAT
GCTCTAATTCACATTTAGTGCCTAGCAACAAGATTGGGACGCTTCGAACG
GCAGCGTATTTTGAAGCTCGTATTGTCTTTATAGTGTTTTGTGCATTTTG
AGAGGTTTGCGACGAGGTTGTAGAATACATCACGATGAATCCATCAGCGT
ATTCGGTATACGCATCGAAAGACTGGGAAAGAAATAAAAGGATTTAATTA
GAAATTACATAGTCCGTATAAAAAACCTTGGTCTGGAAGCTTATACACCT
TTTCGACCGTAGCCACCAATTGCCGCGCGGGCATTTTTTTGTCCGCTTTA
TCCCACTAAAACCTTCTCAGTCCTTTTTTCGCACCAATAGACAATAGAAA
AATGCGTCAAAAAAGGATTGGGACGGTTTTAGTGAGATAAAAAAAATGCC
CGCGCGACTACGGTCGAAAAGGTGTATTGATTTTAACTTTTTGTTAGCTT
TTTAATAGTGAGGTTAAGCATACAAGGATAATGACGACGACGGACGAAAA
ATGTAATAGGCTAGTGAAAATACGAAATTTGATTGGTTGAAACTCACTAG
TCTGTTGAATTTTCGTTCGTCGTCGTGATTTTACTGATTTACTTAACCTC
ACTAATAACAAAAGATAAAAATCGATTTGCGAAGTTTTTGATCACGTTAC
CAAGTACGCCTCTTGGGATTCGTTTAAGATTTAATCACATGATTAAAAAG
TTAGTAAAACAAACTAATTTCTCAACGCAAGTTCAAGTCAGAAACAATGG
AAAGAAACAAAAGACTTCCAGTTCCACACCGGGGTTTTTTATACGGACTA
TAATTGGTCAGCCCCATTCGCTATCGTCGCCATTGCCATAAGATTTATTT
TGATTTTTCCGATCGCCCGATTTTCTGATCGCACCCAATTAATTCCGATA
TTCGGATTATTTTCGGAAAACAAGTTATCGGGAAAACTTTGGCGCGAAAA
ATATTTTTTCTTGAAAGAGAAAAGAAACACATCGATAACTTCATTAAAAG
ATTTGCGCATGATAATAAAAGAACACTATAATTAAAAATTTTTTTTGTTT
ATTCAATAAATCGAAAGAAGCTATTGCATTGTAAATAAATAGAGAGTGTA
AAAGAAAGTTTTTCATGATTGGTTTTGAGAATTTCTTCTGTTTCTTGTCT
GGAGAGTTTTGTGTGTAACAAAGGAACGTCAAAGCAAGGATATATTATAC
ACTGGATATACAAGTAACAGATTTTTGCCGATTTCTCGTGTACTAGCTAT
GTCCGCAGTAATGATATTATTGTTCACTCTCCTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCACTCTCCTTCCCTCATTAAATGATTTTTCGAAGCATT
TTTATTGCATTTCTTATCAAAAATCACTCATCCAATTCCCAAAAGAGACT
TAAAACTTTCCTGTGAGATTCAGATTCTTCCACTTAATTGCTAATCATAA
GTCGTTATGACGTTTCAGGCTGCGAGAAAGATGCAAAAGACGTGTTGTGT
ATAAGAAATTGAATGTTGACACCGGAAATTTTCAAGCTTTAACCTCAAAA
AAACACCTTGCCACCACGTGCCTCCAAAGGATTTTCATACCACAGTGGAA
CCAAGACACTCAAGTCTTACGTATGTTAATTTCAGCTGTTCTGGGGACAG
TCTTGGAAAGATATTTCCAATTGAAAATTTTGTGTCATTATAAGCATTTT
GTCTGAATTTCTTGTCTAATGATGTTTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCCCCGGAACCGTGCACACTCAACGAGGAGCGGCCTTGACT
GGAGAAAAAATAAATAAATCTACATAAAAATGAACAAAAGTGACGAAGCT
GCAGTGAACATATTATAAAGCGGCCGCCTCGGATACTTTCTCAGAGAATA
AAGAACAGGTTTAATCGTTTAAGACATTCTAACGAAATGATTTGTGTGAA
ATTCCAAGAATGAAATAATCTATCACATCTCTGTCTGCTTTGGACAAATT
CAACTTTGTTTTAAACTTTTTTTTGTCTGAAGTTCAACCAAAATGAGCTT
TTCAACCTCTTTGGCTTTAACATCGAATTAGGTTTCTTGATTGTACTTTC
TTCTAATCGTTAAGGTTTTAAGCTTATTGGGCTGACCTTCCAGCGCAGCT
GGTTTATTAGCTTTCATTCAATTGTTTTTCGACTGACCTGATCTTGCTTG
GAAATAATCATTATGAAGCAATAAACGTTTTTTAAGAAATGACTATTAAG
GGTTCAATTGACAAAATATTAAGAATACTGTAAAGAACAGTTCAAAGCTT
TGTGGACTAAAACACCCAATTTCTATGAAAAATACACAAAATACTCGCAA
AATGGTGAAAATAAGAACAAGGCTCAAAACAAATACGTTTAAGAACATCT
GATGGTTTGAAAACTTTTTGGATGCTCTTATAAAAAACATGTACGTACGA
TCATAATAAAAGTAGCAATCGTATATGTGTGAAATTAGAGGAAATAGTTC
GTACATAGTAATGATAATATTTCTTTCTATGACAACGCTGTAAAGAAGAA
TTTGTTATAAGGCAATTGTTTTCATCTGATGATAGTAAGCTGTGATGGCC
GAGTGGTTAAAGGCGTTAGACTTGAAATCTAATGGGTTCTACCCGCGCAG
GTTCGAACCCTGCTCGCAGCGATAAACATTATATTTTGCTCCTACTTCAC
TTTTTATTCAAGGTAGAGATGCCTAAAAAGCCAAAAAAATGTTCTTAACG
TGTTTTTTACACCATTTTGTGAGTAATTTTGCCCANTAAAAAATGTTCTT
AACGTGTTTTTACACCATTTTGTGAGTAATTTTGCCCATTTTCCTAAGAT
AAATAAATTGGATGTTTGAGAGTTCACAAAGCCTTAAATTATTCTTAAAA
ATGGCTAACCATCGAAGCCTTATGTTCTTATATAGCCTGTTCTTATAAAA
AATCGTGTACTAATGCCTTTTTATGCCGTTCTTTTAGTCACACATATGGA
TATAGTTATTCTAGCTCACCTTGTTCACAGTGTCCCATAATTTGACTTTG
GCTGATCCATTTGAACATTGTATTTGCTTCTCGTACGTGCGTTCTAAAAT
TATGGTTATAAGATCATTGTTGGGCTATAGTTGGCCCAGAAATAGTCTGT
AACGTCGAGGAGGTGTGACGTCCAGGGTGGGGTGGTTTAGGAAAATAAAA
GATCCAAGGGGGTCTGGTTTTTCAATGTAAAAATACAGGGTGGTCAGCAA
AATGATGTGGAAAATCCAAAGGGGTCCTGAAAAATTGAAAAAAATCCATG
GGTGGGGGTCACTTTTCACAAAAAAGACCTTCTCAACACAGGGGATACAA
ATTCTTTCTGGAATAGCCCATTTCAGATATTTCCTTCGCCATTGAGTTTA
AAGTCCCAAAGAGGGTAGAAATAAAACTTTTGGATGGGAAATAGCAAATA
ATGAAAAACTTCTTATATTTCAAGTCTTTAATTTTTCCGTTTAAAGAAAT
CTAGTTCAAAACCAAATAGATTGATTTTGAGAGATTTCGACATCGAAATG
GAAGGGGGTGATTTAATTTCAAAATCTATATGCAATGCCACATCATTTAG
TTCTTAAATTCTCAATATCCAAAATTGTAAATCTGTAATTTTCAATTGCT
ACTAGCTGAATGTGAAATATCTGTCACTTTTAGGACTCAGCACTCCATCT
TGCAGACAGTTCTAAAGAGACGGGG Coding sequence (CDS) from alignment at sc0000062:630444..638268- >TCONS_00006079 ID=TCONS_00006079|Name=TCONS_00006079|organism=Clytia hemisphaerica|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000062:630444..638268- (Clytia hemisphaerica)
GACTCAGCACTCCATCTTGCAGACAGTTCTAACATAAGCGGGGTGAGTGG
AAAGATTCTCTAAACTTAATTAGTGCCCCTCACCCGCTTATTAGGTTCTT
ACTGAAATTCATATTCATTTATTTCTTTAAGATAATGTATAGTAAAATAT
ATGCTGCTACAACCAAAGGTGATATAAATATTCTCCAACAACAACAAACA
AAGTCAGGTAAAGCACCGCGATCGAAACTAGCATTAACTGGACTTGCTAT
AACAGGAGGATTGGCTGTCGGTGTATCTTTAGTGACATTCTCTTTTATAT
CACCTGCACTCCGTCGCATATGTCTTCCCTTTGTACCTGCCACAGATAAT
CAAATCTCTAATGTATTGAAACTGTGTAAAAAGAAACAAGGTGGAGGAGG
GAGTTTAGTTGATCTTGGGAGTGGAGATGGAAGGATTGTGTTTTCTGCTG
CGAAGAATGGTTACCAGGCTACAGGGTATGAGTTGAACCTTTGGTTAGTT
CTATATTCAAAAATATCAGCAAGGATGCAGAATTTATGGCCAAATGCGAA
ATTTGAGCGAAAAGACTTATGGAAAGTTGACTATAAACAATTTGATAATA
TTGTGATTTTTGGTGTTGCTGACATGATGAATGAGTTGTCAATTAAACTA
GAAAATGATATGGATGATAATTCTCGTGTGATTGCTTGCCGTTTTGAAAT
ACCTCGATGGAAACCTGTCAAAGAAATTCAAGATGGTATCGATTCAACTT
GGTTATACACTAGAGAAAGTTTCAACAGAACGCAGCCTACTGAAGATACT
AGACTCAGCACTCCATCTTGCAGACAGTTCTAACATAAGCGGGGTGAGTG
GAAAGATTCTCTAAACTTAATTAGTGCCCCTCACCCGCTTATTAGGTTCT
TACTGAAATTCATATTCATTTATTTCTTTAAGATAATGTATAGTAAAATA
TATGCTGCTACAACCAAAGGTGATATAAATATTCTCCAACAACAACAAAC
AAAGTCAGGTAAAGCACCGCGATCGAAACTAGCATTAACTGGACTTGCTA
TAACAGGAGGATTGGCTGTCGGTGTATCTTTAGTGACATTCTCTTTTATA
TCACCTGCACTCCGTCGCATATGTCTTCCCTTTGTACCTGCCACAGATAA
TCAAATCTCTAATGTATTGAAACTGTGTAAAAAGAAACAAGGTGGAGGAG
GGAGTTTAGTTGATCTTGGGAGTGGAGATGGAAGGATTGTGTTTTCTGCT
GCGAAGAATGGTTACCAGGCTACAGGGTATGAGTTGAACCTTTGGTTAGT
TCTATATTCAAAAATATCAGCAAGGATGCAGAATTTATGGCCAAATGCGA
AATTTGAGCGAAAAGACTTATGGAAAGTTGACTATAAACAATTTGATAAT
ATTGTGATTTTTGGTGTTGCTGACATGATGAATGAGTTGTCAATTAAACT
AGAAAATGATATGGATGATAATTCTCGTGTGATTGCTTGCCGTTTTGAAA
TACCTCGATGGAAACCTGTCAAAGAAATTCAAGATGGTATCGATTCAACT
TGGTTATACACTAGAGAAAGTTTCAACAGAACGCAGCCTACTGAAGATAC
TA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006079-exon-sc0000062-1575043694:637498..638268 | TCONS_00006079-exon-sc0000062-1575043694:637498..638268 | Clytia hemisphaerica | exon |
| TCONS_00006079-exon-sc0000062-1575043694:630444..630485 | TCONS_00006079-exon-sc0000062-1575043694:630444..630485 | Clytia hemisphaerica | exon |
| TCONS_00006079-exon-sc0000062-1510915933:637498..638268 | TCONS_00006079-exon-sc0000062-1510915933:637498..638268 | Clytia hemisphaerica | exon |
| TCONS_00006079-exon-sc0000062-1510915933:630444..630485 | TCONS_00006079-exon-sc0000062-1510915933:630444..630485 | Clytia hemisphaerica | exon |
| TCONS_00006079-exon-sc0000062-1491911889:637498..638268 | TCONS_00006079-exon-sc0000062-1491911889:637498..638268 | Clytia hemisphaerica | exon |
| TCONS_00006079-exon-sc0000062-1491911889:630444..630485 | TCONS_00006079-exon-sc0000062-1491911889:630444..630485 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062 | supercontig | sc0000062:630444..638268 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029063 | SAM-dependent_MTases |
Blast
BLAST of TCONS_00006079 vs. Swiss-Prot (Human)
Match: F173B (Protein FAM173B OS=Homo sapiens GN=FAM173B PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 4.611e-44 Identity = 77/164 (46.95%), Postives = 105/164 (64.02%), Query Frame = 3
Query: 252 VTFSFISPALRRICLPFVPATDNQISNVXXXXXXXXXXXXXXXXXXXXXXRIVFSAAKNGYQATGYELNLWLVLYSKISARMQNLWPNAKFERKDLWKVDYKQFDNIVIFGVADMMNELSIKLENDMDDNSRVIACRFEIPRWKPVKEIQDGIDSTWLYTRESF 743
V F++PALR++CLPFVPAT QI NV+K+ + ++G + RIV +AAK G+ A GYELN WLV YS+ A + + +AKF DLWKV + Q+ N+VIFGV MM +L KLE +++D++RVIACRF P W P +GID+ W Y +F
Sbjct: 54 VATPFVTPALRKVCLPFVPATTKQIENVVKMLRCRRGSLVDIGSGDG---RIVIAAAKKGFTAVGYELNPWLVWYSRYRAWREGVHGSAKFYISDLWKVTFSQYSNVVIFGVPQMMLQLEKKLERELEDDARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTF 214
The following BLAST results are available for this feature:
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