TCONS_00006039 (transcript) - C. hemisphaerica

Overview
NameTCONS_00006039
Unique NameTCONS_00006039
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3552

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00006039 ID=TCONS_00006039|Name=TCONS_00006039|organism=Clytia hemisphaerica|type=transcript|length=3552bp
TCCTCTGGTTAATGTATcccaaaaataaatattttctcttaGTCAAGATC
AATTAGGATCAAATAATTACAGTTAGAATGTTCTGTGCAGACTATGTCAC
TGCATTTGTTTATCATATGATTATGACAGGTGGTGCTGTCTGGCTATGTC
AGCAAAAAACCAAAGATGATATACCTGACAACAAcaataaacttaaattt
aatGATAGTATTTTCTCTATTGCTGTTCAAAGTCTTGGTCTCAGCCAAAC
ACCAAGGCATGAGAGAATTGGTAATCAAACAGTGGACAAAAAACTGAACA
TGTTCTATCCAGTTTTGACAGGCAGTTTAGCAGGCCTGGCTGCATCTGTG
ACTTTATATCCTTTGGACTTTGTACGTTCTGGAGTTGTTGAACCAGGGTT
GAAACGTGTTTTATCAGCAGGGTCAACTGTGCCATATGCAGCAACATTAT
TTGGAGTATATTTTGGTTGTCGTGATCCAAAATCTACCTCATCGCAGTTC
AAATGGGCCATGGCAGCTTCTACAGgcCCAAGAGTATGATGGAAATGAAA
CTCTCAACAAAGATATCAGTGGTTGTTTCTTATGGCCAGAACATGAAACA
TATTGCAAGATCGTACAAATAGCCCAAATCTCTTCTGCAAGTCTATTTCT
TGTTATTTCCTTGTTCATTATACTCATTATCTGGGTCTTCAAATTATATC
ATTCTTTCCTTCAAAGACTAATCCTTTACATTTCTTTATGCTCTGCAGTT
CTTTGCATCACATTTCTTTTAGGTAATATCAACACTAATCATAATAATGC
ATTTTGTTTTGTGCAAGCTTTATcgatgcattatttttcttggGCTACTC
TTTCCTGGGTTATATGCACTACCATTAACATGGTTTTCATCTTACGCCAA
TTGAATACTGAGAAATCTGAAAGATGGTACCACCTATTTGTTTGGTTGAA
TTCCGCATTTTGGACCATTATACCAGCAGTTATcggtgattttggaaaaa
ctgaAATATGGTGTTGGATTACTATCCAGCATCCAATACTCAAATTCACT
GTGTGGTATATTCCATTATTATTGGTCTGCATGCTGATGATTGTTGTTTA
TTGCTACATATTCTTCCATAACAAGAAAGTCAGTCGGTCAGCATCAACCG
TTTATAGTATTGATAAATCTGAAGAGAAGCGCTTAAACAAACAAGAAGTT
AAACCCCTTATTGGATTTCcatttatttatatattattCACCATACCAAT
TTTCATTATGAGAATTCGTGAGACTTTCTATCCTGATGATTCACAAAGAT
TTATTCTGGTTCTAGTGGCTGTTATCCTTGGTCCATCCATAGGCACCTGC
AATGCTTTAGCCTATGCCCTTTTCCATGGAACATTCAGAGCCTTAACATT
CAGGAAGTTCAAATCTGCTCTCCATACAAAGATTTTCGGTAAAAAATACA
AAGTGACCAGAGGTTTTGACCTGCCAAGCTATTATGAAGATGCTGCAAGG
TCCCCCAACGTCATGAGAAAAGGACCTCTTGTGtttcaaaataaactttt
tgatcaATCAGGTAATCGCGAATACATGGTCAAAGTTTGAGtaatacaaa
atttcaatttgaatggATATTAAGTAGAGCTTTTATACTTAGTTAAACGT
TTGAATTGAATgcacttttaaaaatttgtacTAGTTTGTATGTCAGTTTT
ATTCTTAATTAGTCTCAATTCAAAGATAATATTTTTAATAGCTTCTTCAA
CAAAGCACTGATCCATATTCTGGTATATAATtcaaagttttcaccaaaat
gcTGTTAGTAAAATGTATGTATGTAATGTAAAATTTTGATCATTTATATG
TAATCTTTAAAAGAGTTCTGGATAAATAGAATGTGTACTTTATTTTTATA
TCGCAGGTAATTTTGTGTGAATCTAAGagcaattatttttataattattt
tgaaaccaatcaaaaaagaaaataaatagccgtgaaatgtttcatttttg
ttttattgcATCGCAAGGATTACTTAAGTTTGTTTCCTTTTATAAATATT
GAATCTGCATTGATTAAAATGATCTAAATTAtacaattttgtttttaagg
gcttatatatagttaaaaaaaataaagatagcAGCATAATTTAAAGATTC
TACAACGATGTTGAAAAATTCAACATACTGTTTCTTCTGGCCTGATAACC
CATCAAGATGCAAGACCATAGTCATACTACAATACCTGTTTAGTAGCATA
TCATTCATATGTTTACTATGTTTACTAGTCATGATAATTATGTTCAAACT
CTACAAACTGTTCGTGCAACGTTTAATTTTATATCTTTGTTGTTGCAGTC
TGGTGAATACTGCATTATACTTTGTTCATGTGGATAAAATTAGCCCTGGC
AGTTGTATATTCCAAGGATTTCTGAATCAATTTATGTCATGGACTGAATT
ATTATGGGTTTGCGTTGTCACTGGTAATATCTTTTTAGTCATGCATGGAT
ACCAGTTACAAAAATACGAAAAGAAAGTTCACCTTTTTGTGTGGTTGACT
TCATTATTCTGGAGCGTTATCCCATTTTTCGGTCATTTTTATGGACAAGC
CGGAAGCTGGTGTTGGATCAAGCGGGAACACACATCAGTACGGTTTGGTG
TCTGGTATGTCCCTTTAATGCTGGTGATCTTTGTAATGTTGGCTATGTGT
TTTTACATGATTTGCTGTTCTTCCTCATATGAGCAGGAATACACCTACAC
TGAGGGTGGTTCTTTCTTTGAGCAGCAACAAAGCCGCAGCAGacaccaat
cagaagtaagGCCCTTGATTGCGTATCCAATCATCTATTTTCTATTGAAT
CTACCAATGTTGATTTACCGGATAGATGATGCAGTTCACCCAGATGATGT
TCCTGATTACACTTTAATGGTTTTGAGTGTCATTGCATCTCCACTCCTTG
GTGCCTTCAATGCTTTTGCTTTCTGTATTATTGAGGATACGTTGAAAGAT
TCATGTTCAATAGCGGCACTCAGGAATATTCTTTGTTGCACTGGTGAAAC
AACTAGGATTGTCCATAACTATGAGGTTGTAGATGGTGAAAGTTAGATAT
CAATGACTATGCAAGTATTCTTGACTGTTCCATCATAGTCACTAGAATTA
TACATCAATCTGCACATACAAATTAATCAtgtgaccaaaataaaaaatcg
gcCAACCTCTGAGCCGGGACTTCCAGACCATGTAtaatattcaattgaca
ttggttCCATCTAATTGTCAAGTTGCTGATGACCAATGTTTTTAAATAGT
TATCCTATTGTGGTAATGTTGTAGTGATTGTGCTTGTTGAAATTTTCAAC
CTTATACTGACAAACTACAAAGTAGCATAAAGCTAAATTTTTTAAGTTGA
TTGGGATTAATGCAGTATCATTTAATTGCTGGAAAggaattttttatatt
atttacaTCAATTTTTTAGTTACTTTTTAGTATtcatttttaaagtattt
ttatccctttttataaatattttataacaatattttatatgtttttgtGC
CC
Run BLAST on NCBI

protein sequence of TCONS_00006039-protein

>TCONS_00006039-protein ID=TCONS_00006039-protein|Name=TCONS_00006039-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MQQHYLEYILVVVIQNLPHRSSNGPWQLLQAQEYDGNETLNKDISGCFLW
PEHETYCKIVQIAQISSASLFLVISLFIILIIWVFKLYHSFLQRLILYIS
LCSAVLCITFLLGNINTNHNNAFCFVQALSMHYFSWATLSWVICTTINMV
FILRQLNTEKSERWYHLFVWLNSAFWTIIPAVIGDFGKTEIWCWITIQHP
ILKFTVWYIPLLLVCMLMIVVYCYIFFHNKKVSRSASTVYSIDKSEEKRL
NKQEVKPLIGFPFIYILFTIPIFIMRIRETFYPDDSQRFILVLVAVILGP
SIGTCNALAYALFHGTFRALTFRKFKSALHTKIFGKKYKVTRGFDLPSYY
EDAARSPNVMRKGPLVFQNKLFDQSGNREYMVKV
Run BLAST on NCBI

transcript from alignment at sc0000062:43638..47978-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00006039 ID=TCONS_00006039|Name=TCONS_00006039|organism=Clytia hemisphaerica|type=transcript|length=4341bp|location=Sequence derived from alignment at sc0000062:43638..47978- (Clytia hemisphaerica)
TCCTCTGGTTAATGTATCCCAAAAATAAATATTTTCTCTTAGTCAAGATC AATTAGGATCAAATAATTACAGTTAGAATGTTCTGTGCAGACTATGTCAC TGCATTTGTTTATCATATGATTATGACAGGTGGTGCTGTCTGGCTATGTC AGCAAAAAACCAAAGATGATATACCTGACAACAACAATAAACTTAAATTT AATGATAGTATTTTCTCTATTGCTGTTCAAAGTCTTGGTCTCAGCCAAAC ACCAAGGCATGAGAGAATTGGTAATCAAACAGTGGACAAAAAACTGAACA TGTTCTATCCAGTTTTGACAGGCAGTTTAGCAGGCCTGGCTGCATCTGTG ACTTTATATCCTTTGGACTTTGTACGTTCTGGAGTTGTTGAACCAGGGTT GAAACGTGTTTTATCAGCAGGGTCAACTGTGCCATATGCAGCAACATTAT TTGGAGTATATTTTGGTTGTCGTGATCCAAAATCTACCTCATCGCAGTTC AAATGGGCCATGGCAGCTTCTACAGGTGCTGTGCTTGCAGAAATGCCTTT AGATTATGCAAAGCATAATATGATAGGGAGTACAAGAGTTATACTTGGTA TAGGACTACTATATGTACCATTTGCTGGTTTTATGCTAGTCATGTACGAC AAAGCATTACTCAAAATATTACATCCCTTTACAAAGGACAATGCTTGAAA TTTTAGGACGCCTTTTTATTACTTTTTGAAATTTGACAGTGTGTAATATC ATGAATACAGTAAATTTTAAAAATGTTTGTGTATAATATTGTCGTATTTT AGAAAAGACATTTATTCAAAACCAATTTAGCCATCCATATTCGCAAAAAA TTATTGAAAATTAGCCTACCCTCCCTAGGGTAGAAATGCATCATATTACC CTTCATTTTCAGTCATTTGTTTGTTCAACTACAGTCGTCTAATGCAATCT AAAAATTAAGTAATTTAAGCGATTTCATATGATGCTAGTGGACTATCATT AATGGTTTAAAAAGATGTTTGTAAATATGCCTAAGAAAGAGGCTGATGAA TACTTATATATAGGTAACAGACACTTGGCAGTGCAATACAAGGAATGATT TTGCGATAAGTTTCGAGATTCTCTTGCATAATACTATTTACCAACATACC TTTTTATAGTAAAAGGACATTAGAAAAAGTGCTATCACGTCAATTAGCAT TTTACATTCAAATTATACAGGATACATTGTACCCTTTTAACCAATGAAAT TGCTGATATTTTTTGGCCACTAAGAGTTATAAAAAGTTACAGGATTGTTT TTTTTATTATTTAGGCCCAAGAGTATGATGGAAATGAAACTCTCAACAAA GATATCAGTGGTTGTTTCTTATGGCCAGAACATGAAACATATTGCAAGAT CGTACAAATAGCCCAAATCTCTTCTGCAAGTCTATTTCTTGTTATTTCCT TGTTCATTATACTCATTATCTGGGTCTTCAAATTATATCATTCTTTCCTT CAAAGACTAATCCTTTACATTTCTTTATGCTCTGCAGTTCTTTGCATCAC ATTTCTTTTAGGTAATATCAACACTAATCATAATAATGCATTTTGTTTTG TGCAAGCTTTATCGATGCATTATTTTTCTTGGGCTACTCTTTCCTGGGTT ATATGCACTACCATTAACATGGTTTTCATCTTACGCCAATTGAATACTGA GAAATCTGAAAGATGGTACCACCTATTTGTTTGGTTGAATTCCGCATTTT GGACCATTATACCAGCAGTTATCGGTGATTTTGGAAAAACTGAAATATGG TGTTGGATTACTATCCAGCATCCAATACTCAAATTCACTGTGTGGTATAT TCCATTATTATTGGTCTGCATGCTGATGATTGTTGTTTATTGCTACATAT TCTTCCATAACAAGAAAGTCAGTCGGTCAGCATCAACCGTTTATAGTATT GATAAATCTGAAGAGAAGCGCTTAAACAAACAAGAAGTTAAACCCCTTAT TGGATTTCCATTTATTTATATATTATTCACCATACCAATTTTCATTATGA GAATTCGTGAGACTTTCTATCCTGATGATTCACAAAGATTTATTCTGGTT CTAGTGGCTGTTATCCTTGGTCCATCCATAGGCACCTGCAATGCTTTAGC CTATGCCCTTTTCCATGGAACATTCAGAGCCTTAACATTCAGGAAGTTCA AATCTGCTCTCCATACAAAGATTTTCGGTAAAAAATACAAAGTGACCAGA GGTTTTGACCTGCCAAGCTATTATGAAGATGCTGCAAGGTCCCCCAACGT CATGAGAAAAGGACCTCTTGTGTTTCAAAATAAACTTTTTGATCAATCAG GTAATCGCGAATACATGGTCAAAGTTTGAGTAATACAAAATTTCAATTTG AATGGATATTAAGTAGAGCTTTTATACTTAGTTAAACGTTTGAATTGAAT GCACTTTTAAAAATTTGTACTAGTTTGTATGTCAGTTTTATTCTTAATTA GTCTCAATTCAAAGATAATATTTTTAATAGCTTCTTCAACAAAGCACTGA TCCATATTCTGGTATATAATTCAAAGTTTTCACCAAAATGCTGTTAGTAA AATGTATGTATGTAATGTAAAATTTTGATCATTTATATGTAATCTTTAAA AGAGTTCTGGATAAATAGAATGTGTACTTTATTTTTATATCGCAGGTAAT TTTGTGTGAATCTAAGAGCAATTATTTTTATAATTATTTTGAAACCAATC AAAAAAGAAAATAAATAGCCGTGAAATGTTTCATTTTTGTTTTATTGCAT CGCAAGGATTACTTAAGTTTGTTTCCTTTTATAAATATTGAATCTGCATT GATTAAAATGATCTAAATTATACAATTTTGTTTTTAAGGGCTTATATATA GTTAAAAAAAATAAAGATAGCAGCATAATTTAAAGATTCTACAACGATGT TGAAAAATTCAACATACTGTTTCTTCTGGCCTGATAACCCATCAAGATGC AAGACCATAGTCATACTACAATACCTGTTTAGTAGCATATCATTCATATG TTTACTATGTTTACTAGTCATGATAATTATGTTCAAACTCTACAAACTGT TCGTGCAACGTTTAATTTTATATCTTTGTTGTTGCAGTCTGGTGAATACT GCATTATACTTTGTTCATGTGGATAAAATTAGCCCTGGCAGTTGTATATT CCAAGGATTTCTGAATCAATTTATGTCATGGACTGAATTATTATGGGTTT GCGTTGTCACTGGTAATATCTTTTTAGTCATGCATGGATACCAGTTACAA AAATACGAAAAGAAAGTTCACCTTTTTGTGTGGTTGACTTCATTATTCTG GAGCGTTATCCCATTTTTCGGTCATTTTTATGGACAAGCCGGAAGCTGGT GTTGGATCAAGCGGGAACACACATCAGTACGGTTTGGTGTCTGGTATGTC CCTTTAATGCTGGTGATCTTTGTAATGTTGGCTATGTGTTTTTACATGAT TTGCTGTTCTTCCTCATATGAGCAGGAATACACCTACACTGAGGGTGGTT CTTTCTTTGAGCAGCAACAAAGCCGCAGCAGACACCAATCAGAAGTAAGG CCCTTGATTGCGTATCCAATCATCTATTTTCTATTGAATCTACCAATGTT GATTTACCGGATAGATGATGCAGTTCACCCAGATGATGTTCCTGATTACA CTTTAATGGTTTTGAGTGTCATTGCATCTCCACTCCTTGGTGCCTTCAAT GCTTTTGCTTTCTGTATTATTGAGGATACGTTGAAAGATTCATGTTCAAT AGCGGCACTCAGGAATATTCTTTGTTGCACTGGTGAAACAACTAGGATTG TCCATAACTATGAGGTTGTAGATGGTGAAAGTTAGATATCAATGACTATG CAAGTATTCTTGACTGTTCCATCATAGTCACTAGAATTATACATCAATCT GCACATACAAATTAATCATGTGACCAAAATAAAAAATCGGCCAACCTCTG AGCCGGGACTTCCAGACCATGTATAATATTCAATTGACATTGGTTCCATC TAATTGTCAAGTTGCTGATGACCAATGTTTTTAAATAGTTATCCTATTGT GGTAATGTTGTAGTGATTGTGCTTGTTGAAATTTTCAACCTTATACTGAC AAACTACAAAGTAGCATAAAGCTAAATTTTTTAAGTTGATTGGGATTAAT GCAGTATCATTTAATTGCTGGAAAGGAATTTTTTATATTATTTACATCAA TTTTTTAGTTACTTTTTAGTATTCATTTTTAAAGTATTTTTATCCCTTTT TATAAATATTTTATAACAATATTTTATATGTTTTTGTGCCC

Coding sequence (CDS) from alignment at sc0000062:43638..47978-

>TCONS_00006039 ID=TCONS_00006039|Name=TCONS_00006039|organism=Clytia hemisphaerica|type=CDS|length=2310bp|location=Sequence derived from alignment at sc0000062:43638..47978- (Clytia hemisphaerica)
GCCCAAGAGTATGATGGAAATGAAACTCTCAACAAAGATATCAGTGGTTG
TTTCTTATGGCCAGAACATGAAACATATTGCAAGATCGTACAAATAGCCC
AAATCTCTTCTGCAAGTCTATTTCTTGTTATTTCCTTGTTCATTATACTC
ATTATCTGGGTCTTCAAATTATATCATTCTTTCCTTCAAAGACTAATCCT
TTACATTTCTTTATGCTCTGCAGTTCTTTGCATCACATTTCTTTTAGGTA
ATATCAACACTAATCATAATAATGCATTTTGTTTTGTGCAAGCTTTATCG
ATGCATTATTTTTCTTGGGCTACTCTTTCCTGGGTTATATGCACTACCAT
TAACATGGTTTTCATCTTACGCCAATTGAATACTGAGAAATCTGAAAGAT
GGTACCACCTATTTGTTTGGTTGAATTCCGCATTTTGGACCATTATACCA
GCAGTTATCGGTGATTTTGGAAAAACTGAAATATGGTGTTGGATTACTAT
CCAGCATCCAATACTCAAATTCACTGTGTGGTATATTCCATTATTATTGG
TCTGCATGCTGATGATTGTTGTTTATTGCTACATATTCTTCCATAACAAG
AAAGTCAGTCGGTCAGCATCAACCGTTTATAGTATTGATAAATCTGAAGA
GAAGCGCTTAAACAAACAAGAAGTTAAACCCCTTATTGGATTTCCATTTA
TTTATATATTATTCACCATACCAATTTTCATTATGAGAATTCGTGAGACT
TTCTATCCTGATGATTCACAAAGATTTATTCTGGTTCTAGTGGCTGTTAT
CCTTGGTCCATCCATAGGCACCTGCAATGCTTTAGCCTATGCCCTTTTCC
ATGGAACATTCAGAGCCTTAACATTCAGGAAGTTCAAATCTGCTCTCCAT
ACAAAGATTTTCGGTAAAAAATACAAAGTGACCAGAGGTTTTGACCTGCC
AAGCTATTATGAAGATGCTGCAAGGTCCCCCAACGTCATGAGAAAAGGAC
CTCTTGTGTTTCAAAATAAACTTTTTGATCAATCAGGTAATCGCGAATAC
ATGGTCAAAGTTTGAATGCAGCAACATTATTTGGAGTATATTTTGGTTGT
CGTGATCCAAAATCTACCTCATCGCAGTTCAAATGGGCCATGGCAGCTTC
TACAGGCCCAAGAGTATGATGGAAATGAAACTCTCAACAAAGATATCAGT
GGTTGTTTCTTATGGCCAGAACATGAAACATATTGCAAGATCGTACAAAT
AGCCCAAATCTCTTCTGCAAGTCTATTTCTTGTTATTTCCTTGTTCATTA
TACTCATTATCTGGGTCTTCAAATTATATCATTCTTTCCTTCAAAGACTA
ATCCTTTACATTTCTTTATGCTCTGCAGTTCTTTGCATCACATTTCTTTT
AGGTAATATCAACACTAATCATAATAATGCATTTTGTTTTGTGCAAGCTT
TATCGATGCATTATTTTTCTTGGGCTACTCTTTCCTGGGTTATATGCACT
ACCATTAACATGGTTTTCATCTTACGCCAATTGAATACTGAGAAATCTGA
AAGATGGTACCACCTATTTGTTTGGTTGAATTCCGCATTTTGGACCATTA
TACCAGCAGTTATCGGTGATTTTGGAAAAACTGAAATATGGTGTTGGATT
ACTATCCAGCATCCAATACTCAAATTCACTGTGTGGTATATTCCATTATT
ATTGGTCTGCATGCTGATGATTGTTGTTTATTGCTACATATTCTTCCATA
ACAAGAAAGTCAGTCGGTCAGCATCAACCGTTTATAGTATTGATAAATCT
GAAGAGAAGCGCTTAAACAAACAAGAAGTTAAACCCCTTATTGGATTTCC
ATTTATTTATATATTATTCACCATACCAATTTTCATTATGAGAATTCGTG
AGACTTTCTATCCTGATGATTCACAAAGATTTATTCTGGTTCTAGTGGCT
GTTATCCTTGGTCCATCCATAGGCACCTGCAATGCTTTAGCCTATGCCCT
TTTCCATGGAACATTCAGAGCCTTAACATTCAGGAAGTTCAAATCTGCTC
TCCATACAAAGATTTTCGGTAAAAAATACAAAGTGACCAGAGGTTTTGAC
CTGCCAAGCTATTATGAAGATGCTGCAAGGTCCCCCAACGTCATGAGAAA
AGGACCTCTTGTGTTTCAAAATAAACTTTTTGATCAATCAGGTAATCGCG
AATACATGGTCAAAGTTTGAATGCAGCAACATTATTTGGAGTATATTTTG
GTTGTCGTGATCCAAAATCTACCTCATCGCAGTTCAAATGGGCCATGGCA
GCTTCTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003446XLOC_003446Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006039-proteinTCONS_00006039-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00006039-exon-sc0000062-1575043694:47454..47978TCONS_00006039-exon-sc0000062-1575043694:47454..47978Clytia hemisphaericaexon
TCONS_00006039-exon-sc0000062-1575043694:43638..46664TCONS_00006039-exon-sc0000062-1575043694:43638..46664Clytia hemisphaericaexon
TCONS_00006039-exon-sc0000062-1510915933:47454..47978TCONS_00006039-exon-sc0000062-1510915933:47454..47978Clytia hemisphaericaexon
TCONS_00006039-exon-sc0000062-1510915933:43638..46664TCONS_00006039-exon-sc0000062-1510915933:43638..46664Clytia hemisphaericaexon
TCONS_00006039-exon-sc0000062-1491911889:47454..47978TCONS_00006039-exon-sc0000062-1491911889:47454..47978Clytia hemisphaericaexon
TCONS_00006039-exon-sc0000062-1491911889:43638..46664TCONS_00006039-exon-sc0000062-1491911889:43638..46664Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000062supercontigsc0000062:43638..47978 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.84609 2.52943 0 0 2.63178 2.72001 2.20118 3.02366 3.05335 2.17825 2.05834 2.52853 1.2578 1.63317 1.42416 1.69225 2.94495 2.53857 1.58737 2.0829 2.07732 2.07159 2.02083 3.13097 1.1516 1.34265 1.93978 0.939372 2.35788 1.96477
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR022343GCR1-cAMP_receptor
IPR022340GPCR_GCR1_put
IPR017981GPCR_2-like
Vocabulary: Molecular Function
TermDefinition
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007166cell surface receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004888 transmembrane signaling receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00006039 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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