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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006037 ID=TCONS_00006037|Name=TCONS_00006037|organism=Clytia hemisphaerica|type=transcript|length=1591bp
cagaaaaagaaaatataaaatgaagaTGGCAATTATAAATAAAGCAAATT
TTACAGTTGAATGTCCACTATGGCCTGATAAACCTGGCAGGTGTGAAGTG
ATTCTTGGATTACAACGCTCATTTTCTGCCATATCATTGATTGGATGTTT
ATTTGTCATATTGGTGATCTGGTTATTTCGCATGTATAAATATTTTGTAC
AAAGGCTCATTTTATTCCTTAGTGTATCTGCAGCTTTACAGTGTGTATCT
TTCCTCATTGGTGATATCTACACAGATAATTTTCTTTGTGAATTCCAAGC
ATTTATCATGCAGTATTTTGGATGGGCTACCCTTCTCTGGGTAGTGGCAA
TGACTGTTAATTTAATCATGGTTCTAAAGGGAATGGAAAGTGCTCGCTAC
GAGAAATTATTCCATTTGGTATGTTGGGGCCTGCCTTTGTTATGGGCCTG
TTTACCGTTCCTTCACAATAGTTATGGACCAGCTGGTGTCTGGTGCTGGA
TTAAAAGGGATGCAACTTATTTACGATTTGGTACTTGGTATATCCCCATC
TTTGTCACCATTTTTGCCATGTTTGTTGCCTACATTTACATCGTTGTGTC
CGTTTTCAAACGTAAGGAACGCTGGACTGGCACCTTTAATCAGGAAGAGG
AACATGATAAGCAGATGCTGGCTCGGGAGGTGAAACCTCTAGCTGCATTC
CCCTTGATCTACCTCCTTTCTGGTATCCCGACCCTGATCTACCGTATTGA
TGATGCAGTACATCCACATCTGCTACCCTCCTACCCCTTACTCATCTTCA
GCGTAATCATGTCTCCACTAGTGGGAGCAATGAATGCTATAGCATTTGCA
GTTTACggtgaaattcaaaaattgttgaCCTGGGGTCAAATTAAATCAGC
ATTTTTATCACGTTTTCAATCAGATTCGGCAAGGATTATACATAATGTAG
AGATCGGTGATAATTTACCGGATAATGATTATCTACAAGTTGAAAACGAG
GCTGATGATGTTGATGATGGTATCGAGTATTAAGGACGGATAATTTATTG
TTTTCCAAGTTGGCGATATACCTAAAATGAAATAATAGTTATAAGGGTAT
AAAGAGTATATACACTAAATCAAGtgagattaaactttgactgaaaaaaa
atcattttttaatttgcttTATCAGTTTGATGAAAGATTTAGAACAAAGA
TGTCCAGTGAAATTCTTTCTTCTTattctttcaatatttttgaaggTAAA
AggtgatttctttcatttttagggaatATATAAGTTGAATGTTTCCAAGT
GGTAATACTAGTGATACTGTATTAATTTCATTGGAATGATCtcttttatg
ataattattctGTTATAAATGAATTATTAcgatttatttgatttttatct
AAAATAATTATGTATGATATCTGAAAGTAATATAACATCATGTCTCAGTG
TTGTAAAATATTGTtgtaaatattcttttaatttctttaagAGTTGACTT
TTTGATTTGTGTCattaaatttgtattttctAATTGAcggttttaatttt
ttgaagtaaaaattAAGCTTCGTTGTTTTCAgtaagatttt Run BLAST on NCBI transcript from alignment at sc0000062:41241..42831- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006037 ID=TCONS_00006037|Name=TCONS_00006037|organism=Clytia hemisphaerica|type=transcript|length=1591bp|location=Sequence derived from alignment at sc0000062:41241..42831- (Clytia hemisphaerica)
CAGAAAAAGAAAATATAAAATGAAGATGGCAATTATAAATAAAGCAAATT
TTACAGTTGAATGTCCACTATGGCCTGATAAACCTGGCAGGTGTGAAGTG
ATTCTTGGATTACAACGCTCATTTTCTGCCATATCATTGATTGGATGTTT
ATTTGTCATATTGGTGATCTGGTTATTTCGCATGTATAAATATTTTGTAC
AAAGGCTCATTTTATTCCTTAGTGTATCTGCAGCTTTACAGTGTGTATCT
TTCCTCATTGGTGATATCTACACAGATAATTTTCTTTGTGAATTCCAAGC
ATTTATCATGCAGTATTTTGGATGGGCTACCCTTCTCTGGGTAGTGGCAA
TGACTGTTAATTTAATCATGGTTCTAAAGGGAATGGAAAGTGCTCGCTAC
GAGAAATTATTCCATTTGGTATGTTGGGGCCTGCCTTTGTTATGGGCCTG
TTTACCGTTCCTTCACAATAGTTATGGACCAGCTGGTGTCTGGTGCTGGA
TTAAAAGGGATGCAACTTATTTACGATTTGGTACTTGGTATATCCCCATC
TTTGTCACCATTTTTGCCATGTTTGTTGCCTACATTTACATCGTTGTGTC
CGTTTTCAAACGTAAGGAACGCTGGACTGGCACCTTTAATCAGGAAGAGG
AACATGATAAGCAGATGCTGGCTCGGGAGGTGAAACCTCTAGCTGCATTC
CCCTTGATCTACCTCCTTTCTGGTATCCCGACCCTGATCTACCGTATTGA
TGATGCAGTACATCCACATCTGCTACCCTCCTACCCCTTACTCATCTTCA
GCGTAATCATGTCTCCACTAGTGGGAGCAATGAATGCTATAGCATTTGCA
GTTTACGGTGAAATTCAAAAATTGTTGACCTGGGGTCAAATTAAATCAGC
ATTTTTATCACGTTTTCAATCAGATTCGGCAAGGATTATACATAATGTAG
AGATCGGTGATAATTTACCGGATAATGATTATCTACAAGTTGAAAACGAG
GCTGATGATGTTGATGATGGTATCGAGTATTAAGGACGGATAATTTATTG
TTTTCCAAGTTGGCGATATACCTAAAATGAAATAATAGTTATAAGGGTAT
AAAGAGTATATACACTAAATCAAGTGAGATTAAACTTTGACTGAAAAAAA
ATCATTTTTTAATTTGCTTTATCAGTTTGATGAAAGATTTAGAACAAAGA
TGTCCAGTGAAATTCTTTCTTCTTATTCTTTCAATATTTTTGAAGGTAAA
AGGTGATTTCTTTCATTTTTAGGGAATATATAAGTTGAATGTTTCCAAGT
GGTAATACTAGTGATACTGTATTAATTTCATTGGAATGATCTCTTTTATG
ATAATTATTCTGTTATAAATGAATTATTACGATTTATTTGATTTTTATCT
AAAATAATTATGTATGATATCTGAAAGTAATATAACATCATGTCTCAGTG
TTGTAAAATATTGTTGTAAATATTCTTTTAATTTCTTTAAGAGTTGACTT
TTTGATTTGTGTCATTAAATTTGTATTTTCTAATTGACGGTTTTAATTTT
TTGAAGTAAAAATTAAGCTTCGTTGTTTTCAGTAAGATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006037-exon-sc0000062-1575043694:41241..42831 | TCONS_00006037-exon-sc0000062-1575043694:41241..42831 | Clytia hemisphaerica | exon |
| TCONS_00006037-exon-sc0000062-1510915933:41241..42831 | TCONS_00006037-exon-sc0000062-1510915933:41241..42831 | Clytia hemisphaerica | exon |
| TCONS_00006037-exon-sc0000062-1491911889:41241..42831 | TCONS_00006037-exon-sc0000062-1491911889:41241..42831 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062 | supercontig | sc0000062:41241..42831 - |
Blast
The following BLAST results are available for this feature:
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