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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006026 ID=TCONS_00006026|Name=TCONS_00006026|organism=Clytia hemisphaerica|type=transcript|length=2118bp
AAACAATAATAGATAACAAAAACAAGCACAATGCCTCGTTCATCCAGTCA
ACGTCACCAACGACAACGTCATGATGCAAACAATAATGGCAGACGACCAC
GTTCTAAAACTTTCAGCGGATTACCGTCCGATATTCAACTCATGACAGAT
AGTGTGCCGCCGATAATTGAAGACGTCATCAAAAACAACAGCCACCAAGG
TGGCGGCGGAGATTCATCAACCGGAGAAAATTCATCACCGGAAACACCCA
CCGAACCAGAACATTACAAAAACGAAAcacaaaaggaaaagaaaaagaaa
aaacggAAAAAGGATCGACAACCAACGGTAACAATGTCACCCCCGGCTGA
CGCACAAGTTCCAGTGTTCTTTGCAGACGATATACGGCATCGAGACGggg
gtcaaaataagaaaaaccatGACAAAATTTCGTCAAAGAATTCCGGATTG
TCTACACCGAAGATAGAGAAATCATCAAGTTTTAAACGAAAAACGAAGCC
ACCATACTTGGAGTCAATGATGGCAAGAGAGTATAACTCTGATCAAAATA
GTAAAAGTCCGAGCAGACCTGACTCCcgtaacaacaacaacaacacaaag
AATGATACAGAATACAACATTGTACTGTTAGGAGATTTTGGAGTCGGAAA
AACtgctCTTGCAGTTCGTTTTGTCACGAGGCGTTACCTACATGAATATG
ACCCAACATTAGAACGCACGTACGAGAAGCAAATACAATGTTCAAATGGA
TCAGCCAAAGTCAAATTATGGGACACTGTGAACAAGTCTTTCGATGCGTA
TACCGAATACGCTGATGGATTCATCGTGATGTATTCTACAACCTCGTCGC
AAACCTCTCAAAATGCACAAAACACTATAAAGACAATACGAGCTTCAAAA
TACGCTGCCGTTCGAAGCGTCCCAATCTTGTTGCTAGGCACTAAATGTGA
ATTAGAGCATGCGCGGAAAGTACATGCTAAAGAACAAGAAGCCTTCGCAA
AGGCTCATGGGTGTTTATGGCGGGAAATTTCTGTAGCGTGTACGATAAAT
ATTGATGGGACCATTAAAGGTTTGATCGAGGAAATAATAATAACGGACAA
CGGCCGAATTGATTCAAATGGACATAGTAAATTAACAGCTACTACGAGTT
TGTCGCGGAAACCGAGTGCTGCTAAAAAGCATTTGATGAAAAGTTTACTA
TCGTCCAAAAAGAAGGAGAAATCTTGATATTGATAAATGCATCTGATTGT
TGGGAAGATGTTGAAAGTATGAAGGTttataatgagaaagaaaaacgaTT
TCGATCATTTATGGTACCATATAGAGCGGTAGTAGAGCTTTCAATTCCAA
AGNACGATTTCGATCATTTATGGTACCATATAGAGCGGTAGTAGAGCCTT
CAATTCCAAAGTTGTCAAGCTCGATGTCTTTTAATAAGATGCAATAAATT
TCGAAGCTTGACCGTACCATGTATGATCGCGTAAAACGATTATGAAATAA
CGTTGAataaatagaccttatcggagtttttttttctaaaaaagcgatgc
attgtgggattgttttaagtgtattacaatataaatctctaggaattcct
cgagggaattctaatGTAATACActtgaaacaatcccacaatgcatcgct
tttttagaaaaatcaaaaactctgataaggtctATTAAGTAAAACTAACA
GAGAAAATTAAACTCGAAGAGCTTCGGTTCAAGAAAATTGTCGAGACATA
TACAGAATTCGAAAACGGCATCAACATTTGGAATAAAATTTCAtatgata
ttttggtttaataaattgtataaattGGAAATAGGTATTTTTGTAATTAT
AATTTGATGAAAGAAACATTATAAATTTCTAGAAAACTTTTTTGTACCAC
TCAGATATACCATTCCAACGAGATGTCTAATGTCGTAAggtattgttgga
aagataataaTATATGTCCCGCATAAATATATAAAACAAACCTTAAGTGG
GTTAATTTTGGCGGGATTAAAATTGGCGAATTtagtgattttcagaaaaa
ttcgCAAATATAAGTTCATTGGACCATTCGAGTTCTGAGgactgtattca
tgatatgcaccactggaa Run BLAST on NCBI transcript from alignment at sc0000062:622764..635928+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006026 ID=TCONS_00006026|Name=TCONS_00006026|organism=Clytia hemisphaerica|type=transcript|length=13165bp|location=Sequence derived from alignment at sc0000062:622764..635928+ (Clytia hemisphaerica)
AAACAATAATAGATAACAAAAACAAGCACAATGCCTCGTTCATCCAGTCA
ACGTCACCAACGACAACGTCATGATGCAAACAATAATGGCAGACGACCAC
GTTCTAAAACTTTCAGCGGATTACCGTCCGATATTCAACTCATGACAGAT
AGTGTAAGTGTCcgagaaaaaagtttcaattataatcaaCTAGTTGTGTG
TCTGTGTTTAAGTGCCTGTCCCTATATCAGGTctgcattatgcttagcat
tctattgttctcaaacaatagagccattgttagGTACCCAAAACGGAGCC
TGTATAtgcttattaaaagaaaaaacatgtatttctgGAAGATTGGGTTG
ACAGATTCACTATACAGATCCATGACAGAGGTCAAACTGTATAGCTTGAA
CTGAAACCTTAGAGCTCATTTATCAGCTACAGTTGGTAAAACGTGAATGA
GGTAAATCCAATTACAGGTAGAATACACAACAGTTACGGTGGTAACCTaa
cagattttttcaaaacaccCTTAAATTCTCAAATCTCCATCGGGAAATTC
TTCTCATTCGTGGTTACAGTTTTCAAATGTCGTGATCTCTAGTACAGTAC
TCACGAAGACGCCAGCCTCGTGTTGGCTAAataaattgtaattttttttc
aaaattagttCTGATCGTGAATCTTCTTATGGTTAGACCTTGTCATTTCT
TACACAAAAAGTAATAAACCAATAAACCTCTTGTCTCCTTTGCTATAAAT
CTGAAAGAAATGGCTCGAGTTCTATATGCAGAGGTTATACAAGCAATTTA
AGCTTATCAGTTCCGTTATTAGAagcaaaattctgtcattttattGTGAA
ATTTCCTACAAAGGACAAACGCAACTTGAAACTGTCTTACCCTCACCATT
AAACTTTAACTATGACTAAGAGGTAGAATTGATGAAATTTCATTCGAAAC
ACCTCTGTATGATAAATATTCTTTCAGACATAcattatcggcccttttta
cgccggcccttactatgccacgagcccaaaaataacaccAAGAGTTCTAC
TATATACTCTAGTGAGGGCCCCTTTACTATGAAAAACGCGCGACGAAGAT
AAAACTATTCACAGGCcggccgtaccatatttttttcaaaacagccTCAG
ATTTCCTATCTTCGTATTTGGATTCAAAAGGGGAGAACccggggggcagt
gggtttaccaactgatgGTATGTGCAGCGAAagaattggcttttagaatc
gcatcCTGAAAGTGCAGAAAATCGGtaaaattcatacccttacagtgcat
ttagctcaaaaatttctttctttcaggGCAAAAAGAATTAggattttcgg
acaaaagttCTTTCTAGATTTGCTGAATTtttacccttagagtgcatttg
tGCTATTATGAAAAACATTGGCTTTAACCAACGCACATACCCGTCCGTCA
ATTTGCCTGACCCCCCCCGGAATGATAACAATTCTACTATACTTAGATGC
TTCATGTAAGGACAGAAGAAAAGACGAGAAGGGCTTATTTAGTAGAAAAA
GTTGAGCTTGTACAATCAAGATAAAAATAATTAGGATTATACATTAAACA
GCCGTTTTATATCTCAGAGGTCACAAGTAATAACCGCAAGAAAGTTATAA
ACTTCGAGTTTAATTAGAAACATGAATATCGTTGACAAGTTTTGTCGATT
GAAAGCGATATGGTTTAAGGGAAAGAGGGCTGAATCATAATGAAAGATTT
GAGTGAAGTTCTTGCTCTTGTTCGCTCGAGAAGGTTGTAGAGTGCTGAAC
GAAGAGAATGCAGTTATGGTACGTTAACCCATATTTGAGACCATTCAAAT
TATGAGAATTATCTTTTATacggggtggggggggggttaatTTTCATGAC
AAGAGGAACCTTGGGATAAAAGGAGAACATTTTTATCCTTACTGACAACA
GTGTGGTAAAAATGCGCTCTTTCGCTGAGTCTGGATCAAGGCTTGGTACT
GAAAACATCATTATTTCTGCACTTCTCTATTTGGGGGCACCATTTTAGTG
ATCAAATTCATTTAACTTATCATTTTCAACCAAACGcattacatttcaaa
atcaacaaaaatagaAGGTATAACTTTACTATAACTTTACGTTTCGCTGG
GAATAATTCCTgacatttatgaaatttttttctacgGGCCCAACCCTTAA
ACACCGGGTGTTAATAGTTGTACTATTTAATTTTGCCACTAATGAAAAAA
CAGCTTTTTTCGGCTGTTTCCGTATCAAAACAGATGTCATAGATATCATG
AATTAAACCAGCATGAAGTAGCGAGTTATTTTTGTTACATATAAGAATAA
CTTTCAAAAATAGATACACTAACAGAGCAGACAGGTTTGATGCGGAAATG
TCATCTCCAATTTCTTTCATCTTAACCGCAAAGTTAATAACGTTTCTTTG
TTGGTATCAAGGAGAATATTATACTTTGACTTGATGTCTGGATTCTAGAA
GTAGTGGTAGGTATATACTCTTTTGGAATTTGAAGATTTAATCTAGTAGT
GAATGCATGTGAGCTTGTTTGAGGCTTAGCAAAGGAGCAGATTACCAGGT
AAGATTTCCTACGACATTTAATTCtgcatattttttttcgaaggaGTATA
CTACCTGAGTTAAAAGGGAAAACAGTTTAAGGACATCATTTTAACATATA
tccaactacacgtttttttttataagaacgtcaaaaattttcgaagcctt
cggatgttcttagttttttggatttgaagcctaaaaatgttcttattttc
agcattttctgagcattttgatgtaatttcttaagaaaatNgttcttatt
ttcagcattttttgagcattttgatgtaatttcttaagaaaatgcatgtt
ttaaagtctccaaagccttagaatgttcttagaatgttcttaaatttttg
ggcctcgaagccttatgttcttatatagtttgtttatataaaaaaaacgt
gtatttttaaacaaaagaaagaacattCTTCCATTCCCGCACCACGCGAG
CACAAAATTTCAATTCAGCTTGTCAGTATTCGAGGTCCACCTCCGTTATA
TTTTAGGGAATGCAAGCAAGCAAATATGTGCATCTTGGTCAGGCTCTCAA
TAATGCTTACAATTCTAAAGACGTGTTTTGGGACCCAATAGATcctatcg
gagtttttgatttttctaaaaaagcgatgcattgtgggattgtttcggga
gtattataatagaaatctcttaggaattcctcgagggaattctattgtaa
tacccccgaaacaatcctgcaatgcatcgctgtttcagaaaaatcaaaaa
ctccgataaggtctattctaAGTCTAGGCGTTCTTATTAGTGTCACATAT
GTGTTTGGTGAAGGAATAACATAAATTGAGTATAAACAGAAACAAAAAAT
CTGGAttaaaggaaaatttgaaaCCATTAATTTTCACCAACGTCAAAATG
AGGTCATTGCACTATTTCATAACACAAATCTGCCTATTGATATAAATACC
ATCGACATGCATTAGATAAGGATCTGTTGGTTTTAAAAAAGTCATTCGAA
AAATCAGATGGAACAAAGATTAAGTTTCAATAAACGCTATTGAAGGTAAT
CTAGTACTTAGAAGGCTTAAACGTTGATGACATCGACTAAAACTGTGCTa
atcaaacaaaattttataaacagactgacagtctgtgccactaactcgat
cgggaagattcttccgaaatgggaagaaccttcccgaacgggaagaactt
ACTCTAATTTTTTCTGCCCGTTTGagaagattcttcctctttgggaagAT
TGACTGAATCTTCGGCGAAGCTGTAAgatgaccggcgaaagttgaaattt
tttggatgtGAAAAGGCAttaaattttaaggtttttcacagaaagaaaaa
taaactttaccgtagaaatcttgttaaattgtgaaaaaactgcgtaagct
tcccaaacgggaagttccaacccgattgggttttccttattttcaaattt
ttttcctgCTTCTTCTCGATCTGGAAGTCCGTTTTTTAACTCTTACTCAT
TCATTACCCGTTTGGGTGTTaagttaatttcccgttcgggaaggtttttc
ccatttcggaagaatcttcccgatcgagttagtgccACAGTGAACACAGA
CATCGTGAAATgacaaaaatggcaaaaaatgttAGAAATGCCTCTGACAA
AATACCATTgaaatgaaaaactgataacTTAGGCCCTAGAAGAGGGTGAT
TCTAAGAATCAAGTCAGCGTAACATGAAAATGTTTTGGGAAATAATTTTT
ACCCGATttcagttatatttttccaaaattttgttttgccaTGACAACCG
TAAAGTTTCCACCACTAGCACAAATGACAATAGACCTTAACGGGATAAAG
AACCAGAGACAAAAGGGGCTTATTATAATCAATATATTATAAGTGGACAT
AAACGCAAATGTAATAATAAAGTTGAGATGATGAGAAAGTTTGATAACAG
ATTTATTCATAAGTAGGTTTAAAAGAGATCAATGAAATTATAAAGAGAAA
GCATTTGGCGTGTATCGATATAAACCTTTAAACAGGAAACACGGTAGGCG
GTTATAATGTTATAGAAGAGTAAGGATTCGAGGTATGAAATGCTTGATGA
ACATTTTATGTTCCGCTAAAAGTCTGcataaaatgtcaaattttaaaCAC
AGGAACATATTGGAGTAGTATAGAATCTGTGCAATACAATTGTTATGGGA
TAACATCAACTTGAACAACTACAGTTTATCCATCCCAAACAAAATAGtag
ttttcagaatttttagaattcaaatttttgaaggcataaataaatgtatt
tttaatgggTTATCGTCAAATAATCAAACACATACGgaagaaattgtaaa
aatgtttgatttaaATTACGTTTCTTTATGTGGGACTTAGCGAGTTTTTG
GATTTCAAGGAGATATGGTTAGGTTGGACCAATTCCTTTCTGATGGGACT
ATCGTGGTTTTGAAGTAAAGATTCAAATCGTTATCAATTCCAGAACAAAG
GAATTTATCAACCGTTATTGAtcaaatgaaacttttttccaCAGGTGCCG
CCGATAATTGAAGACGTCATCAAAAACAACAGCCACCAAGGTGGCGGCGG
AGATTCATCAACCGGAGAAAATTCATCACCGGAAACACCCACCGAACCAG
AACATTACAAAAACGAAAcacaaaaggaaaagaaaaagaaaaaacggAAA
AAGGATCGACAACCAACGGTAACAATGTCACCCCCGGCTGACGCACAAGT
TCCAGTGTTCTTTGCAGACGATATACGGCATCGAGACGggggtcaaaata
agaaaaaccatGACAAAATTTCGTCAAAGAATTCCGGATTGTCTACACCG
AAGATAGAGAAATCATCAAGTTTTAAACGAAAAACGAAGCCACCATACTT
GGAGTCAATGATGGCAAGAGAGTATAACTCTGATCAAAATAGTAAAAGTC
CGAGCAGACCTGACTCCcgtaacaacaacaacaacacaaagAATGATACA
GAATACAACATTGTACTGTTAGGAGATTTTGGAGTCGGAAAAACtggtaa
gaaacattttatgTGTTCGGTCAAAAAATGGAAGAATAGACCTTAtggga
ttttttcatttttctaaaaaagcgatgcattgtggcattgtttcgggagt
attacaatagaattccctcgaggaattcctaagacatttctattgtaata
ccgccgaaacaatcttacaatgcATCgctattttagaaaatttaaaaact
ccTATAAGATCTATACTTTATCTACACGATTCTGTATTTAAAGTCATTTT
TGTGATAGACAAATCAGGTGCCTTTCTTATGCTGATTTTTAATCACTCTG
CATTTACGGTGCCGAGGGAAAGGGTGTGGTCGTCTGGTCGTCCGCTACAG
GCAATGCGGGAGGgagaaaaagttgttttttattttgttcatgATAATTG
TAGGCAAATGGTCAAAGCTACGTTTTTAAATTATATCTGTATATGATCTA
aactttctaaaattaaattctgTTTCAAAGGTATGTGGACACTTtagttt
tttttgcattttcccaGCACCAGACTTTAGGTAGTAAAATTCGACAATTA
AAAAACTTCTCCACAAGAGAGGCAATTACGGTGCACACACATATagtgga
ctctctctaattcgaacttcaattattcgtttttttctataattcgaact
aattctcggATTGAAAATGTAAACTATGAAACAGATGATGTCATAATTTC
CATAAAATATCGTGTGATATTAAATAACAATTTCTATAAAAGATGAGAGA
GAGAATGTGACATGTTTTTATAAGGTGTGTCAACTTGATAACAGATCAAC
TTGTCAAAACTTCTTACAAAATAATTTCTTGTTGTAGTCAATACAAGAAG
CCCACGCAATATTTCAAATCTTTTGCGTCTTTCAGGTTTAACTTCaactt
gtttttaaattttcaccaTACTTGAAACACTTTTGAAAGGCGCTTGTATA
TAAATATTCCAATTGAAAATCAACCAAGGGGGCTCTAGCCAACTATCTTT
ACTATGTACAAGAGTAGAGCCTCCACAACTTGAACGCCCGGGTGCAAGGG
ACAATTGTACCGAGTTTATAAAGAGGTAAAATAGCCTGCTTTTTTTTCAA
GGGACCACTATAATTAGGGAGACTCTACTGTCTTTAAGGTCTAATATGTC
ATGCAACGACGCCAGAGTAATTGTCAAAGAAAAGTATTATCACGTAATAA
AGGTCAAAACCGTATCTAACTTGAATAGAATTAATTAGTTTGATAATTAC
TACCTAAAAAGAAGGACTTAATCCGAAAACAAGGATATAAAATTTAATTA
CACTCATCTATGTTTAGCTCATCACAATCCGAATTAAGGATTCTACAAAC
TCTTTTATATCCGCACACTAAGGTCAAAGACAGCATGGTTTCAGCCCCCT
AGATTTCTAAAGGGGACCTAGGCCCAGCTGTGAGAGGGGAGCTGAAATTT
ACCTGCTGATCTGATAGACTCTGGAGGATGTTTCAAATTGAATACTGCAC
ACAATTCTTAATTTCAATTCTCCATTTTCAAGTTTATTATGATTCGTGTC
TGCCGTTTTTTTGGCAACAATCGTTAagattttaggaatgacaagaaaac
aaaagtgtcatttaaaaaagattctcGGTTAGTCAGGGCTCCTACCAACC
TAAAAcaggttaaaaaaaaacaagttaatCAATGGGGGTACCTATAAACC
CGAAGCAAATTTTTAAGGAGACCTTAATCATTGGATGTGCCATGTTTTCT
TCGGGTgactgaaaagtgggctgaaatcACGTGACACGCTGATTCTCTAG
GGTTATTTCAATATTTGTTGgctgaagattttcttttttgtctctCCTAT
CCCCCTCTTTCTAATATTTTCATTCATCTATCATCTACATTTCAAATCAA
GTAATGACAAATCTgaattatctttcttttttcagctCTTGCAGTTCGTT
TTGTCACGAGGCGTTACCTACATGAATATGACCCAACATTAGGtaagcat
tttcttatttgactTGAAATTCTGATGTACCCCCGTCTCTTTAGAACTGT
CTGCAAGATGGAGTGCTGAGTCCTAAAAGTGACAGATATTTCACATTCAG
CTAGTAGCAATTGAAAATTACAGATTTACAATTTTGGATATTGAGAATTT
AAGAACTAAATGATGTGGCATTGCATAtagattttgaaattaaatcacCC
CCTTCCATTTCGATGTCGAAATCTCTCAAAATCAATCTATTTGGTTTTGA
ACTAGATTTCTTTAAACGGAAAAATTAAAGACTTGAAATATAAGAAGTTT
TTCATTATTTgctatttcccatccaaaagttttatttctacCCTCTTTGg
gactttaaactcaatggcgAAGGAAATATCtgaaatgggctattccagaa
agaATTTGTATCCCCTGTGTTGAGAAGgtcttttttgtgaaaagtgaCCC
CCACCcatggatttttttcaatttttcaggaccccttTGGATTTTCCACA
TCATTTTGCTGACCACCCTGTATTTTTACATTGAAAAACCAGACCCCCTT
GGATCTTTTATTTTCCTAAACCAccccaccctggacgtcacacctcctcg
acgttacagactatttctgggcCAACTATAGCCCAACAATGATCTTATAA
CCATAATTTTAGAACGCACGTACGAGAAGCAAATACAATGTTCAAATGGA
TCAGCCAAAGTCAAATTATGGGACACTGTGAACAAGGTGAGCTAGAATAA
CTATATCCATATGTGTGACTAAAAGAACGGCATAAAAAGGCATTAGTaca
cgattttttataagaacaggctatataagaacataaggcttcgatggtta
gccatttttaagaataatttaAGGCTTTGTGAACTCTCAAACATCCAATT
TATTtatcttaggaaaatgggcaaaattactcacaaaatggtgtaaaaac
acgttaagaacattttttaNTGGgcaaaattactcacaaaatggtgtaaa
aaacacgttaagaacatttttttggctttttaggCATCTCTACCTTGAAT
AAAAAGTGAAGTAGGAGCAAAATATAATGTTTATCGCTGCGAGCAGGGTT
CGAACCTGCGCGGGTAGaacccattagatttcaagtctaacgcctttaac
cactcggccatcacAGCTTACTATCATCAGATGAAAACAATTGCCTTATA
ACAAATTCTTCTTTACAGCGTTGTCATAGAAAGAAATATTATCATTACTA
TGTACGAACTATTTCCTCTAATTTCACACATATACGATTGCTACTTTTAT
TATGATCGTacgtacatgttttttataagagcatccaaaaagttttcaaa
cCATCAGATGTTCTTAAACGTATTTGTTTTGAgccttgttcttattttca
ccattttgcgagtattttgtgtatttttcatagaaattgggtgttttagt
cCACAAAGCTTTGAACTGTTCTTTACagtattcttaatattttgtcaATT
GAACCCTTAATAGTCATTTCTTAAAAAACGTTTATTGCTTCATAATGATT
ATTTCCAAGCAAGATCAGGTCAGTCGAAAAACAATTGAATGAAAgctaat
aaaccagctgcgctggaaggtcagcccaataagcttaaaacCTTAACGAT
TAGAAGAaagtacaatcaagaaacctaattcgatgttaaagccaaagagg
ttgaaaagctcattttggttgaacttcagacaaaaaaaagtttaaaacaa
aGTTGAATTTGTCCAAAGCAGACAGAGATGTGATAGATTATTTCATTCTT
GGAATTTCACACAAATCATTTCGTTAGAATGTCTTAAACGATTAAACCTG
TTCTTTATTCTCTGAGAAAGTATCCGAGGCGGCCGCTTTATAATATGTTC
ACTGCAGCTTCGTcacttttgttcatttttatgtagatttatttattttt
tctccagTCAAGGCCGCTCCTCGTTGAGTGTGCACGGTTCCGGGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacatcattagacaagaaatt
cagacaaaatgcttataatgacacaaaattttcaattggaaatatctttc
caagactgtccccagaacagctgaaattaacatacgtaagacttgagtgt
cttggttccactgtggtatgaaaatcctttggaggcacgtggtggcaagg
tgtttttttgaggttaaagcttgaaaatttccggtgtcaacattcaattt
cttatacacaacacgtcttttgcatctttctcgcagcctgaaacgtcata
acgacttatgattagcaattaagtggaagaatctgaatctcacaggaaag
ttttaagtctcttttgggaattggatgagtgatttttgataagaaatgca
ataaaaatgcttcgaaaaatcatttaatgagggaaggagagtgNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNaaggagagtgaacaataatatcattactg
cggacatagctagtacacgagaaatcggcaaaaatctgttacttgtatat
ccagtgtataatataTCCTTGCTTTGACGTTCCTTTGTTACACACAAAAC
TCTCCAGACAAGAAACAGAAGAAATTCTCAAAACCAATcatgaaaaactt
tcttttacactctctatttatttacaatgcaatagcttctttcgatttat
tgaataaacaaaaaaaatttttaattatagTGTTCTTTTATTATCATGCG
CAAATCTTTTAATGAAGTTATCGatgtgtttcttttctctttcaagaaaa
aatatttttcgcgccaaagttttcccgataacttgttttccgaaaataat
ccgaataTCGGAATTAATTGGGTGCGATCAGAAAATCGGGCGatcggaaa
aatcaaaataaatcttaTGGCAATGGCGACGATAGCGAATGGGGCTGACC
AAttatagtccgtataaaaaaccccggtgtGGAACTGGaagtcttttgtt
tctttccattgtttctgacttgaacttgcgttgagaaattagtttgtttt
acTAACTTTTtaatcatgtgattaaatcttaaacgaATCCCAAGAGgcgt
acttggtaacgtgatcaaaaacttcgcaaatcgatttttatcttttgtta
ttagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaattca
ACAgactagtgagtttcaaccaatcaaatttcgtattttcactagcctat
tacatttttcgtccgtcgtcgtcaTTATCcttgtatgcttaacctcacta
ttaaaaagctaacaaaaagttaaaatcaatacaccttttcgaccgtagtc
gcgcgggcattttttttatctcactaaaaccgtcccaatccttttttgac
gcatttttctattgtctattggtgcgaaaaaaggactgagaaggttttag
tgggataaagcggacaaaaaaatgcccgcgcggcaattggtggctacggt
cgaaaaggtgtataagcttccagaccaaggttttttatacggactatgta
ATTTCTAATTAAATCCTTTTATTTCTTTCCCAGTCTTTCGATGCGTATAC
CGAATACGCTGATGGATTCATCGTGATGTATTCTACAACCTCGTCGCAAA
CCTCTCAAAATGCACAAAACACTATAAAGACAATACGAGCTTCAAAATAC
GCTGCCGTTCGAAGCGTCCCAATCTTGTTGCTAGGCACTAAATGTGAATT
AGAGCATGCGCGGAAAGTACATGCTAAAGAACAAGAAGCCTTCGCAAAGG
CTCATGGGTGTTTATGGCGGGAAATTTCTGTAGCGTGTACGATAAATATT
GATGGGACCATTAAAGGTTTGATCGAGGAAATAATAATAACGGACAACGG
CCGAATTGATTCAAATGGACATAGTAAATTAACAGCTACTACGAGTTTGT
CGCGGAAACCGAGTGCTGCTAAAAAGCATTTGATGAAAAGTTTACTATCG
TCCAAAAAGAAGGAGAAATCTTGATATTGATAAATGCATCTGATTGTTGG
GAAGATGTTGAAAGTATGAAGGTttataatgagaaagaaaaacgaTTTCG
ATCATTTATGGTACCATATAGAGCGGTAGTAGAGCTTTCAATTCCAAAGN
ACGATTTCGATCATTTATGGTACCATATAGAGCGGTAGTAGAGCCTTCAA
TTCCAAAGTTGTCAAGCTCGATGTCTTTTAATAAGATGCAATAAATTTCG
AAGCTTGACCGTACCATGTATGATCGCGTAAAACGATTATGAAATAACGT
TGAataaatagaccttatcggagtttttttttctaaaaaagcgatgcatt
gtgggattgttttaagtgtattacaatataaatctctaggaattcctcga
gggaattctaatGTAATACActtgaaacaatcccacaatgcatcgctttt
ttagaaaaatcaaaaactctgataaggtctATTAAGTAAAACTAACAGAG
AAAATTAAACTCGAAGAGCTTCGGTTCAAGAAAATTGTCGAGACATATAC
AGAATTCGAAAACGGCATCAACATTTGGAATAAAATTTCAtatgatattt
tggtttaataaattgtataaattGGAAATAGGTATTTTTGTAATTATAAT
TTGATGAAAGAAACATTATAAATTTCTAGAAAACTTTTTTGTACCACTCA
GATATACCATTCCAACGAGATGTCTAATGTCGTAAggtattgttggaaag
ataataaTATATGTCCCGCATAAATATATAAAACAAACCTTAAGTGGGTT
AATTTTGGCGGGATTAAAATTGGCGAATTtagtgattttcagaaaaattc
gCAAATATAAGTTCATTGGACCATTCGAGTTCTGAGgactgtattcatga
tatgcaccactggaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006026-exon-sc0000062-1491911889:622764..622916 | TCONS_00006026-exon-sc0000062-1491911889:622764..622916 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1510915933:622764..622916 | TCONS_00006026-exon-sc0000062-1510915933:622764..622916 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1575043694:622764..622916 | TCONS_00006026-exon-sc0000062-1575043694:622764..622916 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1491911889:627908..628409 | TCONS_00006026-exon-sc0000062-1491911889:627908..628409 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1510915933:627908..628409 | TCONS_00006026-exon-sc0000062-1510915933:627908..628409 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1575043694:627908..628409 | TCONS_00006026-exon-sc0000062-1575043694:627908..628409 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1491911889:630349..630405 | TCONS_00006026-exon-sc0000062-1491911889:630349..630405 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1510915933:630349..630405 | TCONS_00006026-exon-sc0000062-1510915933:630349..630405 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1575043694:630349..630405 | TCONS_00006026-exon-sc0000062-1575043694:630349..630405 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1491911889:631076..631149 | TCONS_00006026-exon-sc0000062-1491911889:631076..631149 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1510915933:631076..631149 | TCONS_00006026-exon-sc0000062-1510915933:631076..631149 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1575043694:631076..631149 | TCONS_00006026-exon-sc0000062-1575043694:631076..631149 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1491911889:634597..635928 | TCONS_00006026-exon-sc0000062-1491911889:634597..635928 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1510915933:634597..635928 | TCONS_00006026-exon-sc0000062-1510915933:634597..635928 | Clytia hemisphaerica | exon |
| TCONS_00006026-exon-sc0000062-1575043694:634597..635928 | TCONS_00006026-exon-sc0000062-1575043694:634597..635928 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000062 | supercontig | sc0000062:622764..635928 + |
Blast
BLAST of TCONS_00006026 vs. Swiss-Prot (Human)
Match: RASLC (Ras-like protein family member 12 OS=Homo sapiens GN=RASL12 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.646e-18 Identity = 51/148 (34.46%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 610 EYNIVLLGDFGVGKTALAVRFVTRRYLHEYDPTLERTYEKQIQCSNGSAKVKLWDTVN----KSFDAYTEYADGFIVMYXXXXXXXXXXXXXXIKTIRASKYAAVRSVPILLLGTKCELEHARKVHAKEQEAFAKAHGCLWREISVAC 1041
E N+ +LG G GK+AL V+F+T+R++ EYDP LE TY + + +++ DT + ++ + Y +A F+V+YS S Q+ ++ + ++ + RS+P LLLG K ++ R+V E A A GCL+ E+S AC
Sbjct: 20 EVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVS-AC 166
The following BLAST results are available for this feature:
|
