TCONS_00005888 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005888
Unique NameTCONS_00005888
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2482

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005888 ID=TCONS_00005888|Name=TCONS_00005888|organism=Clytia hemisphaerica|type=transcript|length=2482bp
CACAATTTTACTTTTCGATATTTCTGCTGAAGGTTTTTGAACAAGTCACG
TCTTGCGATCGCGTACTGGTTATGCCACACCGCCCTATACCTGTAAAACC
GTCCCTTGATTGAGGAACGTGTCGTCTTAGCTTTACCTAGTTTCTTTGGC
CTTGATATATCCTAACTGTTTGAGaaacagatttcatttgttGCAATAGG
GAGGAAAGGGTTAGTTCCTAACAAAGCGGGGCAATCTCGCTGCCGTGGAA
ATTTTTCAAGAGCGAAAGTCCCATCATCAGGGAAAAAGTAAAAAGGGTGT
TCACTGCAAAAGGCTGAGGAATTTTAAATgcaaatttagaggttttatgT
AGTTACTTGATacaaaaatataaaaaaacaagatGTCAAACTCTTCAGAA
TCGACTAAATTCAAAATGGTTGTTGTGGGTGCTGGTGGTGTTGGTAAAAG
TGCACTCACTATACAACTTATCCAAAACCAttttgtgGAAGACTATGATC
CAACAATTGAGGATTCCTATATCAAACAGGTTGTCGTAGATGGCTCAATA
TGTATATTAGATATTCTTGACACGGCTGGACAAGAAGAATATAGTGCGAT
GAGGGAACATTATATGCGAACTGGAGAAGGATTCTTGTGCGTTTTTGCTG
TCACTAGTTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGACGCAGGCC
CTTCGAGTCAAAGATGCTGATTCAGTACCTATGGTTTTGGTTGGTAACAA
AGTTGATCTTCCCAAACGAGACGTCTCAACGAAAGATGGAAATGAAAAAG
CACAAATGTTCAACATCCCATACGTAGAAGCATCTGCAAAAACTAAACAA
GGAGTCGAGGAAGCCTTTTTTACTTTAGTTCGAGAAATCATAGCTGATAG
GCGTACAAGGGAAAACCAAAAGAAGAAcgattcaaaaaataaatcaaaat
ttaaatgtaccattctttaaaaaagttctaTTCAACTTCAATGAGAAGTG
CAACTATGTAATTTAAAGGATTAAGCAACCACCACCTCGCTTACTTAAAG
ACAATATCCTTTTGAAGGCCCCACAAAACAACTCGTATTACTACAAAAGA
CATTGATGTTTGGTGGCACATTAAAATAATGTAGATTTATTAATAATATA
CAgcttttttgatggtttttatACGATGGCATTACTATTATAAAAATTGG
ATTAACTATTGGAAACATTTTATTGACAATCTTATTGTGAAGATGTCAAA
TGGCtcccatttttgattttttgatttttttgctatttatattttcattg
aaaCTTCTTTGGAATGAATTAACTGATGAATGGAGTGAGACAAATGAATG
GATGAATGAATGGATGAATTATTATCGATTCTGGtgttatgtatttgttt
ttctcTATTTGAGTCGTATGTTTGACAAAGGCTGGTCTAATTTCTTGACT
ATGCAATTGATTTAATCCTTAACCTGTTTAAAATTATCATTTATATGTTC
ACCCTTTCCTTAAAGATATGTACCTTTGCAATGTCTTTTGGCATTACAAC
GGCCaattggttgtaagtgatgtACTGGGTAGAAATAATCCAAAAATTAC
AGTACATAGTTTCCTGAAgtcattgcaatggtgcatatcataaaagAAGT
GGGTAGCAAGAGTAGAGAAGAGTGATAAACAGTTATTATTTTTCGTGTAT
ATCTTTATATCTTTATATCAGGACTTTTGTTTCCTTGTCTTGTCTTTTCT
TACGAATTCATTTTATAATTGTTAAcaatttattttgtttagttttctTC
CCAATGgtgtatataatataatatttgaCTAGATACGTCTTTTAGTATTT
ACTTTTTTGATGTCTTTTGaacctttgatttttcaaaatgagcatgtcta
aaattcaaaaatggaattttatttataaaattatacagaGTCCTCatgaa
ttaaaagtttataagatGCAAAAGTACATTCTTTTTGGTAGAAGACAAAT
CAAACAGTGTATATATTTCCTTCTTCCTTCGACGCGACTTTATCACTATA
CCTTCAGTTTTtatatgatttatttttcacatttgacTTTATACCtatat
ttgttttatttgatgGTAGATATTTACTTGTGGGCTTTTTTTCCCAATTG
CCCTTTTAATTGATAGAAAAACCAATTTGACGGAAAAAATTCTCCAACAA
CAAGATCGCTTCAtcttaaattgagttttgatctTCTCTATTGTTTCTTT
TTACGGGTATTCTAGTCTATTAAGCCTTTATTATGGTACTATAGAataat
gatatttttattttgaatattttttcctgTTTGTATTTTTTGACCTTCAC
TTCAATCTGGCActctattttttcatttctatttTTAACAATGTAAAACC
CAAACCCTCTGAGAGGTAATAATCTCACCTAAATAACTTAATGATTTcgt
tataaaaaagttttttgaatctTCAATTATGC
Run BLAST on NCBI

protein sequence of TCONS_00005888-protein

>TCONS_00005888-protein ID=TCONS_00005888-protein|Name=TCONS_00005888-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MSNSSESTKFKMVVVGAGGVGKSALTIQLIQNHFVEDYDPTIEDSYIKQV
VVDGSICILDILDTAGQEEYSAMREHYMRTGEGFLCVFAVTSLKSFQEID
NFRTQALRVKDADSVPMVLVGNKVDLPKRDVSTKDGNEKAQMFNIPYVEA
SAKTKQGVEEAFFTLVREIIADRRTRENQKKNDSKNKSKFKCTIL
Run BLAST on NCBI

transcript from alignment at sc0000061:168246..180177-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005888 ID=TCONS_00005888|Name=TCONS_00005888|organism=Clytia hemisphaerica|type=transcript|length=11932bp|location=Sequence derived from alignment at sc0000061:168246..180177- (Clytia hemisphaerica)
CACAATTTTACTTTTCGATATTTCTGCTGAAGGTTTTTGAACAAGTCACG
TCTTGCGATCGCGTACTGGTTATGCCACACCGCCCTATACCTGTAAAACC
GTCCCTTGATTGAGGAACGTGTCGTCTTAGCTTTACCTAGTTTCTTTGGC
CTTGATATATCCTAACTGTTTGAGAAACAGATTTCATTTGTTGCAATAGG
GAGGAAAGGGTTAGTTCCTAACAAAGCGGGGCAATCTCGCTGCCGTGGAA
ATTTTTCAAGAGCGAAAGTCCCATCATCAGGGAAAAAGTAAAAAGGGTGT
TCACTGCAAAAGGCTGAGGAATTTTAAATGCAAATTTAGAGGTTTTATGT
AGTTACTTGATGTAAGTTTATTTAGGGTTTTATTTATGACTATGCCAAGA
TATCTTAGACAAATGATGGAAGTCATTTTTTAGACACAAAATGTTATGAG
TGTTCGATAGTTTTAAGTAGAATATTATTGCGTGTTTTTGTTGTGATTAC
CTTCTTATAAAACCCATTAAATCTATTGCACACCTTCTATTTTCTCAAAG
AAAAAGTGCATGAAGGTGCTGCAAATATCCAAACTCTCCCACCTGATTGA
TACTGTGAGTGGTCCTAAATCCAACTACCTAAAAGCATATGCTTCCTAAT
TCTGGACAGTGGATAGTTTTCAATGTTTCAATCAATACAATGAATTGGAT
ACTGTACATCTTTCCCGTAATTCAAACTTCTCAGAAATGGCCCGGGAAAC
TGTGTGCTCCAACGTTGTGTTAGGGTGGACAGGCCAAAATTTTCCCCTCA
AATTTTGAAAACCAAACTAATTTTATTTGAAAGCCCTTACCTTTGTGAGA
AAAATGAGGGGTCATTTGTTAAAGTAAAATTGGTTAAGTAGTTCGAAAGT
TATTCCATTTTCAAACCACAAAAAAACCCTCTTTTCAAAGAATCGCCTCC
TTACACCACGCCAGCAAGAAATAATTTTCGGAAGCACCAAAATCGCGCCA
AAAATGGGGGATGAAATCTAGTCTTCCGTGTGGCGGGGCGTAAGGAGTTT
TGCTGGCGCGGTCTGAAAATCGGCCCGATGACTGTTGTTAAACTTTAGCC
TATCGCTATTGAGCTGGAAATGATAGCTAAAAACAAATTTTACCAATGAA
AAGCTGAAACCCTTAGCTTTCCAACGATATATGGTAGCCCTGATAAAAAT
TTCAGGAAAGTGCCGAAAAATTGAAATTTCTTCTTTTTTCTCGATTTTAA
GACGACCCGTAGATTATCGAAAAGGCTACCACGTGACATACTAAAGTACT
ATCTTTCCCGCGTTTTATAAAAAAAACCGCGAGTCTATAACTAATCCAGC
TCAATAGCGATACATGTTTTTTTTTATAAGCAAGTGTCTGCCCCTACATC
AGGCTCGCATTATGCTTAGCATTCATCAAAAAATGAGCCTNGCCATTTAA
AAAATCAGTGAGGCTGGAACATCGATTTTTGAGGATTACGATTTTGCCTC
GCTAACCCAAATCTCGCAACCTCTTTATCTTAAAGGATGATCGAAATTAG
AGTTTTTCAACGTTCCGAAAAAAACGCAAAGCAGAAATTTTTTCATCTTC
ACAGGATCGATTGTCAACAACAAAATACATCTTTTGGTCTTTGGGTTTGT
TTCTGACGTTTTTCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTATTTTGCACCCACCATAGAATGGTCCA
AATACGGAGGTATTCCAAATGATAAACGATGTCGTTCTGTAAGTGTTTTT
TTTTCTGATAGATACAAATAGTATATTGAATACTATTAACTTATTTATTT
AAATATTTTTGAGCCCAAATTTAAATATCTGGTTTTAAATAAAAAACAAA
TGACAGCAGTTCTGTTTTTCCCTCAAATCCCCGGGAAAAGTTTTTTTGCC
GACTTAGCTATTTTACAAATTTCGGAAAAGAACTCCCATAGGAATTCCGA
TTCATAACCCGATTGGTTCATTTCAGAACGGCTTCAAGAAAGTCATAATG
GCAGATAATTTTAAAAGTTTCTCTGAGTAAATGTGTGAAGTTTATTGATG
TTGATGGCTTGTTGATTCTTTAAAGAAAAAAGATAACAGGTATAGCTTTT
TCTAATCCTGGAATATTGAGGTTCCAGCTACACTGAAAATGGTTGTCAAG
GTAGACGGCGGTGCCACGAATTCTGAGTCGCCATTTTTTCACCTTGATGT
CTAATAAATGGTATATCTTTTTATTGAAGGTAGGTAATGGGATGGGGTTT
TTTTCTTTGTTTTCTCTGATAAATTCTGAGTATTTAAAAAAAAAGAATGA
ACAAGTTTGGAGTTGTTAAGGATAAGTTATGATGGATGGAATGTTATAAT
TTTGATTTTCAACTTGTTCCACGCAAAAAATCCCGACGAGTGCGCACTCT
AGTTGTGTATAAAATTGTTTGGGAGGTAAACGAACGCGTTTTTTGGGTTT
TTGTCTGCGAGGGGTTAAGGAAAGTGGGTTTTCAGCTTCTAACTTTTGAT
AGTGATCTTCTTTTGGCAAAAGATTTTCAGGGTGGTATAATATCATGAAT
AGATTGAACATACTAAAATTTGAGGGGATTTNGGGTGGTATAATATCATG
AATAGATTGAACATACTAAAATTTGAGAGGATTTTGTTTGACAGAACTTA
AGGAATATATAATAAAAAAACAACTTTCCCTAAGGAAACACAGGCAAAAA
CCAGAGGTGCCAACTCTCACGCATTGGACGTGAGACTCACGCATTCCAAC
ACTGTCTCACGCAATTTTTCAAAAGTTTGATTTCTCACGCATTTTTTATA
TTTGAAAGAAATTTCCCCGATTTTCCGATTTTTGGAATAAATTTCCCCGA
TTTTCCGATTTTTGGAGAAAAAAATTCCCTGATTTTCCGATTTTTGGAAT
AATTTTCCGTTTTCCGAAGTCGGAAAATCGGAAAAATCGGGCTAAGATTT
CGGATTTTCCTTCAAAATTTTTATCTCACGCCAAATGAACATCTTAAGTT
GGCAGGTCTGAAAAACGGGTTTGTTTACCTCCAGAGCCCAAACGGTGGAG
ACCATCAAAATAATGCGCGCGCATTAGTTTTACGAATTACGGGAAAGGTG
TATTGGGCCATTCCAGAAATTGTCTGTAACAGGGGGGCCAACAACACGGG
ATTTCCAAGCGCAAAAGTTTTCACTAAAATTCAAAATTGCGCTAAAATGG
ATCCGTTGAAATTGGGAGATAAACATAAATGGGACCAATGGTAGCGCGAG
TACCGCTAAAAGTTCCCGCTTAAAACAAGAACTCGTTTGCTTATATCTGG
CTTGTTTATATGTTCCTAAAAATACACTGCATTTGAAAAAAACAAAAAAA
CAAAGCTTTCAAGATGCTAGCAGAAGCTATAAGAAAGAGAAGAACAACAA
CTTCGGTGGTTCTTCAGTTGATTTGGAGGTTCTTTTGGCATCAATATTTT
GGGTGTTTTGTAAGGCTTTTTGCCTGAAAACCGCAATATTGCAACACAAG
GAGGTGGAATTTCTGATAAGGTGTAAAATTAAAAACGGCAAAAAAGACGA
AAAGAATGGAATGGAAAATTTCCATCACATTTTGCGAAAGTACATGGATT
TTCATCGGAATTTTCAAGCTTTCATATTATTCCTGTCTCTAAAGAAGGGT
GTCGGAATTAGACGAGGGATGTCGATATTAGACCATGAACTTAGGCAAGG
GGAATTTGATGTTCTGTTTACCGTCAACTGTCCACGTAATGCTCCTGAGC
CACCGCTCAAAAAAGTTCATTATTTCTTAAAAACTCATTATTTTCTTCTT
TCCCTGTGCCAAGCTATCCAAAACACTCAAAGTGAATCAAAAATAACATC
TTCGCTAACAAAATGTGCGCCTCAAGTAAAAAACATGGTTCCAATCACGT
ACGCGAATGGGGCAGACATTTTTTTTAAGCAGTGGGCGGCTACAAGGGCG
TTTTAGAAATTCTCGTTTTAGACGCGTCTCGAACGCGTTTGAATTTTGTG
CTTGTCATTTTGATGCAGCTCGATTTCCTGGTGGATTTCAACTTCTCGTT
GGAGAAGCACCAGGTGTAGGAATAATGAATAATGAATAATGAAATTTTGC
TGCATCAAATATTTTTTGCAACGCGGCGGTAAACAACAGACATCAAATTC
CCCTTCCCTTACGGTACCTCGTCTAGCAGGGGGGACAAAAATTTTCACAA
GCACAGGTTTTTTCAAATGAAAAAAAAATTAATAGAACATAATTCATCCT
TTCTCCTACCTTTCCAAGCAAAAATTTCGAACTTTTCATTTGCCATGCCA
TTAAATAAATATAAACAAAAACATCCTGCTCATCCCAAGAACAAAAGGGT
CCTTACAAATTATGGATCTTTGTGCCTAATTTTCCAGAGGATATGTCTCT
TTTCTACAAATCAAGCGAACTATCGTAAGTTGGTGTAATGTCGACATCTT
TCTTCTAATTTCGGCACCCTTCTTTAGAGATAGGAAGGTCAAAATCACTG
ATGGACTCCTCAACAACTGATCGCTAAGCAAAGAAAATTAGTTTCAAATG
AGAGATTCTTACCTTCCTATTATTCCTGAAGAATCACCTAAAAAAGCAAT
GTACAGTACTGTCAACTGCTCTAACTTGGGACAATCTGACAAAACATGGG
ACGAAAATTCGGCCACCATTTCAACGAACCTCCAAAGTCATTTGATTTGA
GTTGAGTTAATGAACGGCGTATTAGAAAATATACAATTTCTCTTTTGCAC
CGAGTAGGCTTTTAATTCGAAATATGAAAAAAATCTGTAGTGGAACACTC
GCAAGTGTCTGCACTGTAAGAGGAACGAAGAAGTATGATTGATAAACTTG
GTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAACAGTAAGTGA
AAATACAGGCCAGATATCAACCAGTCCCAAGTTAGAGCAGTTGACGGTAT
GTCAAGTAATTTGCTATTCAATAGACCATCAAATTCTCCTAAACAACTAT
ATGGAGATGAGTTGGTCTTATGCTGACATCCCACTTCTAATTCTGACACC
CTTCTTTAGGAATAGTAAGAAGGTTGCAACCTCTGATGGACAACATAGTG
TCCTCCCCCCCCTTTATAAAGGGGGGGGATTCTGATTTTGGCCCTTTTTT
TAAAGTATGGGGGAAAATGAAAAATTTGAAATTTGCTGGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCAATAA
AATCAGCAAATCTTTTGGGATAAACCAACTTTTCAATACAATTTCATTTT
TCCAGCACTTTCAAGGCTATTTTTTCAAGCTTTCCAAAATTTCAAACTTG
ATTTAAGGCATTTTTATGTTAACCATATGGGGAACCGCAAAATCCTCAAA
TAGCTGGGGGAATTCAAAAAAGAGGGGGGAACCGAAAAATTTTGAAATAT
GGTGGGGGAAATAAAAGAGGGGGGGAATGGAGAAAAATTTTGATTTTTAG
TGGGGGGAACCAACCCAGGAGGACACTATGGACAAAAGATAAACAAAACC
TTTAGTTTCCATCAGCAATTCCAATCTTCTTTCTTTCAATCTTTAAAAAG
TGTGTCGGAATTAGAGGAGGGATGATGACATTAGACCAACTTACGATATG
AACATTTAAGTCTTTTTAGGCCATATTTTGATAAGATGTCCAAAGTATAC
AACAGATTTTTATGAGAAGAAATTGCTGTGAGAATGCAAGATAAGATTAA
GATAAGATTTTAAATGTGAAACAAACAAATGCAGTGATTTCTTTAAGAAA
TATAATACAGCAGAGTCTACATTACTCAAACCTCTATTACTCCAGATTAT
TATTCCTGAAAGTTAATTCTCTTTTTTTCTGCCTTTTGTCATGAGATTTT
CTTTAAAGCAAACAGTAATTTTGACTCACATTTTTAGGTTGATGGAATTG
AAGACAGTCAGCTCTAAGCCCTGTTTCACAAAAATTAGTGAAAGTATTGG
ATAAAAATAAAGAAAAGTTAATGAATTGAAAGTTTTCTCTTACAAAATAT
TTTGAAAAGTTGAATTTGCTAAAGTTAATTCTTGTTAAATGATGTTAAAT
TTAGCAAACTTGCACATTTGGGAATATTTCTTCCTGCAAAAGTTTCTNTT
AGTAAACTTGCCCATTTGGGAAAATTTCTTCCTGCAAAAGTTTCTTCCTT
TAAAGTAATAGTTAAAATATAAGTAGTTATAAAAGACTTCTCCAACTCAA
ACCTCCGTAACTCGAAATGTTCTCTTAACTCAAACAGTTTTTCTGGTCTC
TTGAGAGAATGTTAGGCTAATTTATTTCTCCATAACTCAAACTCTCGATA
AAAAGAATAAACTTTTGTTTCAGTTTGGTTTGTTCGAATTATAGAGACTG
TACTGTACAGCAGAGATTATGGGGAGCCAGGGGGGAGCAAGTTAAACAAA
GCAGTCTAAATTAAGTACCTGAAGAAAGCCTCAGGTGTATTTCATACCAT
ACTGAGGAAAATGTCCCAAAAAATTTCGCCTAATTTTCTTTGTCACCCAC
TTGTTTTTCCCCTTTAATGGAAAGTAAGAGGAAAGGCTGATAGGAAAAGG
TCAAAGTCTTAATTCGTTTCTTGTGCAACTGTTAATTTGTGCTCTTTTTT
ATACACATAGACAAAAATATAAAAAAACAAGATGTCAAACTCTTCAGAAT
CGACTAAATTCAAAATGGTTGTTGTGGGTGGTAAGTTTAAATCACAATAG
AACAAATCACTAGTTATCACATAATTACATGTTTTAATTCTTTTCAGGTA
TATTCAATGTCACCCTGCTCATTCCCTACTTTGTTGTCTTATTTTCATAT
AAACATATTCTCCAGTCTCAAATAATGCAAAAATTAAGAGCTGATAAAAA
ATTCCAATCAACCACTTATGATACTCTCCAACAAAAAGGGGTTCTTAAAA
ATCCTCACAAGCCTTCAAATATCTCCTCTCATTTTATTTTTCAATCTATA
CTTTTCAGCTGGTGGTGTTGGTAAAAGTGCACTCACTATACAACTTATCC
AAAACCAGTAGGACAAATTATCTTTTATACTAATTGTCTGAGTATAATAA
GGAGTAATTGTATTGTATTTTTAAATTTTTGAATTCCCTTTTGTAACAGA
TTTGTTTGATTTTATAACAGATTTGTTTTTGCATCATCATTTAAAGTTGA
AAATAAATGAAATTAAAAGATAACTGAATTGACCAAATCTTACTAGTATA
ATTTCCTTATTTTCCTCAAAACTTTCTTTTCTTTTCTTTCTTTATAGTTT
TGTGGAAGACTATGATCCAACAATTGGTATGAATGATTTTTTAGTCTTTT
GAAATTCTGATTTAATCTCCACAGGCATGTTCACAAAGTCAAACAGCAAA
AGTTATTCTTTTGCCTAGACAATATAAGCTATTCAGAATGAAACTTAAAA
AAAGGAGAACAATCAAATGATCATCTATTAAAAGGTGAACTGCAGAAAAT
TCTCCTTGGTGAGTGTGAATGAAATTAAGGGTTAAAAATCGAGGAACCTA
TTAATTCCAGTTAGCACCACTGGTTAACCAGCCTTTGTGGATGGCTTGAG
AGTTTTTGGTATTTATTTATTAAACCTAGATAATACTAGTTACTGTATAA
ACTTTGCAGCATAAATAACTAACACAAAGATTGTTTTTTTCAGAGGATTC
CTATATCAAACAGGTTGTCGTAGATGGCTCAATATGTATATTAGTAAGTT
TATTATTAGTGAAAAATATGAACCTCTTATATTTTACCTTTCCTTTTTAT
TGTAAACAACCCACAAACTTTGAATAGAAAACTTTTTAAGGCACATTTCT
GTTATTTTAATAAAAAGGTTTTGTTCTTTCTTTTGATTGATAGGATATTC
TTGACACGGCTGGACAAGAAGAATATAGGTGAGTCATGCTTGCGAATATA
TACTCTTCTTGAATTGAAATGCATGAAATCATTGTGTGCTTCTTCAAATT
ACCAAGATACTGCAACATCCATAGACATATTAGTGTGTTTAGAGCTTTTC
TGCTTTTGTATTGAAATCGATAACGGTTTTTTGGAAATGAAAATACGCAT
AAACTATGCTATTTTACAACGAGGCAAACAATAATTTTGATTTTTTCTTT
ATTCCTTCAATGCCTTGAGTCTCCTCAAAGACCCTTTACCTTCATCAAGT
TTGTAAAAAAAAGTCAACGGTGAATAATAGGGTAATTTGTAGGAGCTCCA
TTGACCAAACACTTGTGATTTTGATTAAAGTTTACAGGTTAACTTAATTT
GTTGACCAGTGTACTCTAAACTCACAATTTCGTCCTCAGTGTGGTTTGGC
AAGAGGAAATAACTTTATAGAAAATTTTGTTTTTGGATTTTAGTGCGATG
AGGGAACATTATATGCGAACTGGAGAAGGATTCTTGTGCGTTTTTGCTGT
CACTAGTTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGACGCAGGTAA
AGTTTATTCTGCTAAATATAATCTTCAGCAACGACTATACCATTTAAACG
AGTTTGAATAAAAAAGTGGTTTTTGCTTGTTGGAAAGATATTCAAGAGTG
NTCTTCAGCTATACCTTTTAAAGGAGTTTGAATAAAAAAGTGGTTTTTGC
TTGTTGGAAAGATATTCAAGAGTGGCATATTACAAACTAGAATAAATGGA
TTTTAAACATTTTTCATAGTAATAACACTCGAAGATTGAAGTATAGGGAT
TTCTATAGTATGAAAATAATGATCGAAATTTTCTTCTTCATTTTTTTTGG
AATTTTTTTCTTTTTGACAAAAGGTTCCACTCCTGATTGATTATCTTATA
AACAAGCTAAAACTGCTTTTTGATTTAAATGCCCTATCAAATTCTTTCCA
CCGGTTTTATAATATTCAGCTTTTAAATCAAGGCACACTAATTTGAATCT
GTTTCTTTTTGTTCAACGCAATTCATTATTTTACCAATATAATATTACAT
CATTGCCTGATTTCCCTGCTTGTCTTTATATCCAGGCCCTTCGAGTCAAA
GATGCTGATTCAGTACCTATGGTTTGTAAGTAGACCTTACCTTTAGCACT
TAGTTTTTCCTTAAAAATTTTTGAATAGAGTTTTACCTAAAAATTTTGAA
AAAGCAAAGTGGCATGGGTTTGTGGTACTTTTACATCCTGGACCCAAACC
GATCTCAATATGTTGTTCTTAATGGGAGAATAATAAGTATCGATTCATAA
AATAAAAGTCAATTTACCATTATGAACTAATTTTTCTTTGCAGTGGTTGG
TAACAAAGTTGATCTTCCCAAACGAGACGTCTCAACGAAAGATGGAAATG
AAAAAGCACAAATGTTCAACATCCCATACGTAGAAGCATCTGCAAAAACT
AAACAAGGAGTCGTAAGTTAGCTTAATATTGTTACCAACTCTTACAAATC
AAAATTTTCCTCTTTGGAATAAAACCTCTTTGTCATGCAAACACTTATCA
AATATTTAAGCAACTTCACTACACCAAAGCTAAGATTTGACTTAATTCCT
CGATTTATTTTTTCATTATAGGAGGAAGCCTTTTTTACTTTAGTTCGAGA
AATCATAGCTGATGTAAGTTAATATTTTATTTAGTCTTGAATTATTCCTA
ACCCTTTCTTATGACTGCGATTTTCGAATTCGTTGAGGAAATCTAGCGAG
AACTCTTTTATGGTTTGAAATAGCATAACATAATTATTATAAGAAACCAA
GTTGCAGGGTCTTAAACCCTGAACATGTCAAATTTAACTTAGGTACCCTG
AGAAAGCAACCAGAAATTCCTTAAAATGTGGTATTTTCAGCTTTGTTTCG
CATTGAAAGCCTGTATGAACATTGATAAGCAACCTTTACTGGGATTATGA
ACATTCCATTTAAAGTTATGTTGCTTTTTTCATTTTCTTAATTTACAGAG
GCGTACAAGGGAAAACCAAAAGAAGAACGATTCAAAAAATAAATCAAAAT
TTAAATGTACCATTCTTTAAAAAAGTTCTATTCAACTTCAATGAGAAGTG
CAACTATGTAATTTAAAGGATTAAGCAACCACCACCTCGCTTACTTAAAG
ACAATATCCTTTTGAAGGCCCCACAAAACAACTCGTATTACTACAAAAGA
CATTGATGTTTGGTGGCACATTAAAATAATGTAGATTTATTAATAATATA
CAGCTTTTTTGATGGTTTTTATACGATGGCATTACTATTATAAAAATTGG
ATTAACTATTGGAAACATTTTATTGACAATCTTATTGTGAAGATGTCAAA
TGGCTCCCATTTTTGATTTTTTGATTTTTTTGCTATTTATATTTTCATTG
AAACTTCTTTGGAATGAATTAACTGATGAATGGAGTGAGACAAATGAATG
GATGAATGAATGGATGAATTATTATCGATTCTGGTGTTATGTATTTGTTT
TTCTCTATTTGAGTCGTATGTTTGACAAAGGCTGGTCTAATTTCTTGACT
ATGCAATTGATTTAATCCTTAACCTGTTTAAAATTATCATTTATATGTTC
ACCCTTTCCTTAAAGATATGTACCTTTGCAATGTCTTTTGGCATTACAAC
GGCCAATTGGTTGTAAGTGATGTACTGGGTAGAAATAATCCAAAAATTAC
AGTACATAGTTTCCTGAAGTCATTGCAATGGTGCATATCATAAAAGAAGT
GGGTAGCAAGAGTAGAGAAGAGTGATAAACAGTTATTATTTTTCGTGTAT
ATCTTTATATCTTTATATCAGGACTTTTGTTTCCTTGTCTTGTCTTTTCT
TACGAATTCATTTTATAATTGTTAACAATTTATTTTGTTTAGTTTTCTTC
CCAATGGTGTATATAATATAATATTTGACTAGATACGTCTTTTAGTATTT
ACTTTTTTGATGTCTTTTGAACCTTTGATTTTTCAAAATGAGCATGTCTA
AAATTCAAAAATGGAATTTTATTTATAAAATTATACAGAGTCCTCATGAA
TTAAAAGTTTATAAGATGCAAAAGTACATTCTTTTTGGTAGAAGACAAAT
CAAACAGTGTATATATTTCCTTCTTCCTTCGACGCGACTTTATCACTATA
CCTTCAGTTTTTATATGATTTATTTTTCACATTTGACTTTATACCTATAT
TTGTTTTATTTGATGGTAGATATTTACTTGTGGGCTTTTTTTCCCAATTG
CCCTTTTAATTGATAGAAAAACCAATTTGACGGAAAAAATTCTCCAACAA
CAAGATCGCTTCATCTTAAATTGAGTTTTGATCTTCTCTATTGTTTCTTT
TTACGGGTATTCTAGTCTATTAAGCCTTTATTATGGTACTATAGAATAAT
GATATTTTTATTTTGAATATTTTTTCCTGTTTGTATTTTTTGACCTTCAC
TTCAATCTGGCACTCTATTTTTTCATTTCTATTTTTAACAATGTAAAACC
CAAACCCTCTGAGAGGTAATAATCTCACCTAAATAACTTAATGATTTCGT
TATAAAAAAGTTTTTTGAATCTTCAATTATGC

Coding sequence (CDS) from alignment at sc0000061:168246..180177-

>TCONS_00005888 ID=TCONS_00005888|Name=TCONS_00005888|organism=Clytia hemisphaerica|type=CDS|length=5880bp|location=Sequence derived from alignment at sc0000061:168246..180177- (Clytia hemisphaerica)
AGGCGTACAAGGGAAAACCAAAAGAAGAACGATTCAAAAAATAAATCAAA
ATTTAAATGTACCATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTTCGAG
AAATCATAGCTGATTGGTTGGTAACAAAGTTGATCTTCCCAAACGAGACG
TCTCAACGAAAGATGGAAATGAAAAAGCACAAATGTTCAACATCCCATAC
GTAGAAGCATCTGCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCAAAGA
TGCTGATTCAGTACCTATGGTTTTGCGATGAGGGAACATTATATGCGAAC
TGGAGAAGGATTCTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCTTTCC
AAGAAATCGATAACTTCAGGACGCAGGATATTCTTGACACGGCTGGACAA
GAAGAATATAGAGGATTCCTATATCAAACAGGTTGTCGTAGATGGCTCAA
TATGTATATTATTTTGTGGAAGACTATGATCCAACAATTGCTGGTGGTGT
TGGTAAAAGTGCACTCACTATACAACTTATCCAAAACCAATGTCAAACTC
TTCAGAATCGACTAAATTCAAAATGGTTGTTGTGGGTGAGGCGTACAAGG
GAAAACCAAAAGAAGAACGATTCAAAAAATAAATCAAAATTTAAATGTAC
CATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTTCGAGAAATCATAGCTG
ATTGGTTGGTAACAAAGTTGATCTTCCCAAACGAGACGTCTCAACGAAAG
ATGGAAATGAAAAAGCACAAATGTTCAACATCCCATACGTAGAAGCATCT
GCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCAAAGATGCTGATTCAGT
ACCTATGGTTTTGCGATGAGGGAACATTATATGCGAACTGGAGAAGGATT
CTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCTTTCCAAGAAATCGATA
ACTTCAGGACGCAGGATATTCTTGACACGGCTGGACAAGAAGAATATAGA
GGATTCCTATATCAAACAGGTTGTCGTAGATGGCTCAATATGTATATTAT
TTTGTGGAAGACTATGATCCAACAATTGCTGGTGGTGTTGGTAAAAGTGC
ACTCACTATACAACTTATCCAAAACCAATGTCAAACTCTTCAGAATCGAC
TAAATTCAAAATGGTTGTTGTGGGTGAGGCGTACAAGGGAAAACCAAAAG
AAGAACGATTCAAAAAATAAATCAAAATTTAAATGTACCATTCTTTAAGA
GGAAGCCTTTTTTACTTTAGTTCGAGAAATCATAGCTGATTGGTTGGTAA
CAAAGTTGATCTTCCCAAACGAGACGTCTCAACGAAAGATGGAAATGAAA
AAGCACAAATGTTCAACATCCCATACGTAGAAGCATCTGCAAAAACTAAA
CAAGGAGTCGCCCTTCGAGTCAAAGATGCTGATTCAGTACCTATGGTTTT
GCGATGAGGGAACATTATATGCGAACTGGAGAAGGATTCTTGTGCGTTTT
TGCTGTCACTAGTTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGACGC
AGGATATTCTTGACACGGCTGGACAAGAAGAATATAGAGGATTCCTATAT
CAAACAGGTTGTCGTAGATGGCTCAATATGTATATTATTTTGTGGAAGAC
TATGATCCAACAATTGCTGGTGGTGTTGGTAAAAGTGCACTCACTATACA
ACTTATCCAAAACCAATGTCAAACTCTTCAGAATCGACTAAATTCAAAAT
GGTTGTTGTGGGTGAGGCGTACAAGGGAAAACCAAAAGAAGAACGATTCA
AAAAATAAATCAAAATTTAAATGTACCATTCTTTAAGAGGAAGCCTTTTT
TACTTTAGTTCGAGAAATCATAGCTGATTGGTTGGTAACAAAGTTGATCT
TCCCAAACGAGACGTCTCAACGAAAGATGGAAATGAAAAAGCACAAATGT
TCAACATCCCATACGTAGAAGCATCTGCAAAAACTAAACAAGGAGTCGCC
CTTCGAGTCAAAGATGCTGATTCAGTACCTATGGTTTTGCGATGAGGGAA
CATTATATGCGAACTGGAGAAGGATTCTTGTGCGTTTTTGCTGTCACTAG
TTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGACGCAGGATATTCTTG
ACACGGCTGGACAAGAAGAATATAGAGGATTCCTATATCAAACAGGTTGT
CGTAGATGGCTCAATATGTATATTATTTTGTGGAAGACTATGATCCAACA
ATTGCTGGTGGTGTTGGTAAAAGTGCACTCACTATACAACTTATCCAAAA
CCAATGTCAAACTCTTCAGAATCGACTAAATTCAAAATGGTTGTTGTGGG
TGAGGCGTACAAGGGAAAACCAAAAGAAGAACGATTCAAAAAATAAATCA
AAATTTAAATGTACCATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTTCG
AGAAATCATAGCTGATTGGTTGGTAACAAAGTTGATCTTCCCAAACGAGA
CGTCTCAACGAAAGATGGAAATGAAAAAGCACAAATGTTCAACATCCCAT
ACGTAGAAGCATCTGCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCAAA
GATGCTGATTCAGTACCTATGGTTTTGCGATGAGGGAACATTATATGCGA
ACTGGAGAAGGATTCTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCTTT
CCAAGAAATCGATAACTTCAGGACGCAGGATATTCTTGACACGGCTGGAC
AAGAAGAATATAGAGGATTCCTATATCAAACAGGTTGTCGTAGATGGCTC
AATATGTATATTATTTTGTGGAAGACTATGATCCAACAATTGCTGGTGGT
GTTGGTAAAAGTGCACTCACTATACAACTTATCCAAAACCAATGTCAAAC
TCTTCAGAATCGACTAAATTCAAAATGGTTGTTGTGGGTGAGGCGTACAA
GGGAAAACCAAAAGAAGAACGATTCAAAAAATAAATCAAAATTTAAATGT
ACCATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTTCGAGAAATCATAGC
TGATTGGTTGGTAACAAAGTTGATCTTCCCAAACGAGACGTCTCAACGAA
AGATGGAAATGAAAAAGCACAAATGTTCAACATCCCATACGTAGAAGCAT
CTGCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCAAAGATGCTGATTCA
GTACCTATGGTTTTGCGATGAGGGAACATTATATGCGAACTGGAGAAGGA
TTCTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCTTTCCAAGAAATCGA
TAACTTCAGGACGCAGGATATTCTTGACACGGCTGGACAAGAAGAATATA
GAGGATTCCTATATCAAACAGGTTGTCGTAGATGGCTCAATATGTATATT
ATTTTGTGGAAGACTATGATCCAACAATTGCTGGTGGTGTTGGTAAAAGT
GCACTCACTATACAACTTATCCAAAACCAATGTCAAACTCTTCAGAATCG
ACTAAATTCAAAATGGTTGTTGTGGGTGAGGCGTACAAGGGAAAACCAAA
AGAAGAACGATTCAAAAAATAAATCAAAATTTAAATGTACCATTCTTTAA
GAGGAAGCCTTTTTTACTTTAGTTCGAGAAATCATAGCTGATTGGTTGGT
AACAAAGTTGATCTTCCCAAACGAGACGTCTCAACGAAAGATGGAAATGA
AAAAGCACAAATGTTCAACATCCCATACGTAGAAGCATCTGCAAAAACTA
AACAAGGAGTCGCCCTTCGAGTCAAAGATGCTGATTCAGTACCTATGGTT
TTGCGATGAGGGAACATTATATGCGAACTGGAGAAGGATTCTTGTGCGTT
TTTGCTGTCACTAGTTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGAC
GCAGGATATTCTTGACACGGCTGGACAAGAAGAATATAGAGGATTCCTAT
ATCAAACAGGTTGTCGTAGATGGCTCAATATGTATATTATTTTGTGGAAG
ACTATGATCCAACAATTGCTGGTGGTGTTGGTAAAAGTGCACTCACTATA
CAACTTATCCAAAACCAATGTCAAACTCTTCAGAATCGACTAAATTCAAA
ATGGTTGTTGTGGGTGAGGCGTACAAGGGAAAACCAAAAGAAGAACGATT
CAAAAAATAAATCAAAATTTAAATGTACCATTCTTTAAGAGGAAGCCTTT
TTTACTTTAGTTCGAGAAATCATAGCTGATTGGTTGGTAACAAAGTTGAT
CTTCCCAAACGAGACGTCTCAACGAAAGATGGAAATGAAAAAGCACAAAT
GTTCAACATCCCATACGTAGAAGCATCTGCAAAAACTAAACAAGGAGTCG
CCCTTCGAGTCAAAGATGCTGATTCAGTACCTATGGTTTTGCGATGAGGG
AACATTATATGCGAACTGGAGAAGGATTCTTGTGCGTTTTTGCTGTCACT
AGTTTAAAGTCTTTCCAAGAAATCGATAACTTCAGGACGCAGGATATTCT
TGACACGGCTGGACAAGAAGAATATAGAGGATTCCTATATCAAACAGGTT
GTCGTAGATGGCTCAATATGTATATTATTTTGTGGAAGACTATGATCCAA
CAATTGCTGGTGGTGTTGGTAAAAGTGCACTCACTATACAACTTATCCAA
AACCAATGTCAAACTCTTCAGAATCGACTAAATTCAAAATGGTTGTTGTG
GGTGAGGCGTACAAGGGAAAACCAAAAGAAGAACGATTCAAAAAATAAAT
CAAAATTTAAATGTACCATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTT
CGAGAAATCATAGCTGATTGGTTGGTAACAAAGTTGATCTTCCCAAACGA
GACGTCTCAACGAAAGATGGAAATGAAAAAGCACAAATGTTCAACATCCC
ATACGTAGAAGCATCTGCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCA
AAGATGCTGATTCAGTACCTATGGTTTTGCGATGAGGGAACATTATATGC
GAACTGGAGAAGGATTCTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCT
TTCCAAGAAATCGATAACTTCAGGACGCAGGATATTCTTGACACGGCTGG
ACAAGAAGAATATAGAGGATTCCTATATCAAACAGGTTGTCGTAGATGGC
TCAATATGTATATTATTTTGTGGAAGACTATGATCCAACAATTGCTGGTG
GTGTTGGTAAAAGTGCACTCACTATACAACTTATCCAAAACCAATGTCAA
ACTCTTCAGAATCGACTAAATTCAAAATGGTTGTTGTGGGTGAGGCGTAC
AAGGGAAAACCAAAAGAAGAACGATTCAAAAAATAAATCAAAATTTAAAT
GTACCATTCTTTAAGAGGAAGCCTTTTTTACTTTAGTTCGAGAAATCATA
GCTGATTGGTTGGTAACAAAGTTGATCTTCCCAAACGAGACGTCTCAACG
AAAGATGGAAATGAAAAAGCACAAATGTTCAACATCCCATACGTAGAAGC
ATCTGCAAAAACTAAACAAGGAGTCGCCCTTCGAGTCAAAGATGCTGATT
CAGTACCTATGGTTTTGCGATGAGGGAACATTATATGCGAACTGGAGAAG
GATTCTTGTGCGTTTTTGCTGTCACTAGTTTAAAGTCTTTCCAAGAAATC
GATAACTTCAGGACGCAGGATATTCTTGACACGGCTGGACAAGAAGAATA
TAGAGGATTCCTATATCAAACAGGTTGTCGTAGATGGCTCAATATGTATA
TTATTTTGTGGAAGACTATGATCCAACAATTGCTGGTGGTGTTGGTAAAA
GTGCACTCACTATACAACTTATCCAAAACCAATGTCAAACTCTTCAGAAT
CGACTAAATTCAAAATGGTTGTTGTGGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003360XLOC_003360Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005888-proteinTCONS_00005888-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005888-exon-sc0000061-1575043694:179817..180177TCONS_00005888-exon-sc0000061-1575043694:179817..180177Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:173048..173117TCONS_00005888-exon-sc0000061-1575043694:173048..173117Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:172721..172769TCONS_00005888-exon-sc0000061-1575043694:172721..172769Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:172452..172480TCONS_00005888-exon-sc0000061-1575043694:172452..172480Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:172035..172084TCONS_00005888-exon-sc0000061-1575043694:172035..172084Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:171850..171884TCONS_00005888-exon-sc0000061-1575043694:171850..171884Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:171282..171384TCONS_00005888-exon-sc0000061-1575043694:171282..171384Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:170703..170742TCONS_00005888-exon-sc0000061-1575043694:170703..170742Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:170366..170484TCONS_00005888-exon-sc0000061-1575043694:170366..170484Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:170165..170206TCONS_00005888-exon-sc0000061-1575043694:170165..170206Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1575043694:168246..169829TCONS_00005888-exon-sc0000061-1575043694:168246..169829Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:179817..180177TCONS_00005888-exon-sc0000061-1510915933:179817..180177Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:173048..173117TCONS_00005888-exon-sc0000061-1510915933:173048..173117Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:172721..172769TCONS_00005888-exon-sc0000061-1510915933:172721..172769Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:172452..172480TCONS_00005888-exon-sc0000061-1510915933:172452..172480Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:172035..172084TCONS_00005888-exon-sc0000061-1510915933:172035..172084Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:171850..171884TCONS_00005888-exon-sc0000061-1510915933:171850..171884Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:171282..171384TCONS_00005888-exon-sc0000061-1510915933:171282..171384Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:170703..170742TCONS_00005888-exon-sc0000061-1510915933:170703..170742Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:170366..170484TCONS_00005888-exon-sc0000061-1510915933:170366..170484Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:170165..170206TCONS_00005888-exon-sc0000061-1510915933:170165..170206Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1510915933:168246..169829TCONS_00005888-exon-sc0000061-1510915933:168246..169829Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:179817..180177TCONS_00005888-exon-sc0000061-1491911889:179817..180177Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:173048..173117TCONS_00005888-exon-sc0000061-1491911889:173048..173117Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:172721..172769TCONS_00005888-exon-sc0000061-1491911889:172721..172769Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:172452..172480TCONS_00005888-exon-sc0000061-1491911889:172452..172480Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:172035..172084TCONS_00005888-exon-sc0000061-1491911889:172035..172084Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:171850..171884TCONS_00005888-exon-sc0000061-1491911889:171850..171884Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:171282..171384TCONS_00005888-exon-sc0000061-1491911889:171282..171384Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:170703..170742TCONS_00005888-exon-sc0000061-1491911889:170703..170742Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:170366..170484TCONS_00005888-exon-sc0000061-1491911889:170366..170484Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:170165..170206TCONS_00005888-exon-sc0000061-1491911889:170165..170206Clytia hemisphaericaexon
TCONS_00005888-exon-sc0000061-1491911889:168246..169829TCONS_00005888-exon-sc0000061-1491911889:168246..169829Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:168246..180177 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
28.0136	29.1619	38.5391	48.1805	49.0864	40.6545	49.7588	60.6696	44.9611	47.4196	30.2487	37.1911	31.3785	30.9957	26.6862	28.3014	39.7766	40.3443	23.6078	27.574	29.0452	29.4476	24.9351	25.1672	23.2503	26.843	38.4122	27.2398	21.6725	21.5676
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
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BLAST of TCONS_00005888 vs. Swiss-Prot (Human)
Match: RASN (GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.435e-70
Identity = 121/188 (64.36%), Postives = 149/188 (79.26%), Query Frame = 2 
Query:  404 TKFKMXXXXXXXXXKSALTIQLIQNHFVEDYDPTIEDSYIKQVVVDGSICILDILDTAGQEEYSAMREHYMRTGEGFLCVFAVTSLKSFQEIDNFRTQALRVKDADSVPMVLVGNKVDLPKRDVSTKDGNEKAQMFNIPYVEASAKTKQGVEEAFFTLVREIIADRRTRENQXXXXXXXXXXXXCTIL 967
            T++K+VVVGAGGVGKSALTIQLIQNHFV++YDPTIEDSY KQVV+DG  C+LDILDTAGQEEYSAMR+ YMRTGEGFLCVFA+ + KSF +I+ +R Q  RVKD+D VPMVLVGNK DLP R V TK  +E A+ + IP++E SAKT+QGVE+AF+TLVREI   R  + N   + ++      C ++
Sbjct:    2 TEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDDGTQGCMGLPCVVM 189
The following BLAST results are available for this feature:
BLAST of TCONS_00005888 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RASN4.435e-7064.36GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1[more]
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