TCONS_00005867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005867
Unique NameTCONS_00005867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1698

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005867 ID=TCONS_00005867|Name=TCONS_00005867|organism=Clytia hemisphaerica|type=transcript|length=1698bp
tttttaaaaatatcgaaacagaatttttaattcaaatctttcttcttCTT
ACACATGAAGGTCGATTgtaaaaacgaagaagaaaacgaagacaAAGCAT
GTATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAAG
AAGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGGT
GTAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCAG
ACATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgct
caagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAAA
AAGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATCG
ACAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGCC
AACAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCCAA
TTTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGTCT
TTTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTTGG
AAAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCCAA
CCAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAACA
AGGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCACA
GTATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAGAA
AAACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTCAA
TTTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACTTA
AACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaagaaa
ttgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGACAT
TGTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTTGT
TAGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTATCC
TCTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCAGC
TTTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAATAA
AAGGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTTCA
GAATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTCAA
TAAAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCAAT
CTCTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTCA
CCCTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAAA
TGATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAGT
TATCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCTAT
CAACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCTCC
TCAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTATTC
CTGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAAG
Run BLAST on NCBI

protein sequence of TCONS_00005867-protein

>TCONS_00005867-protein ID=TCONS_00005867-protein|Name=TCONS_00005867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=533bp
MYLASLKLKYKSVYNGQEVIEKHSDIQIPYKLNGVEPCGRHALDQSEAGS
RHALDDSGFQSMIIDNGSRFLKRSLDSNNGDLPKKKSTNLIKSHVSSSMN
RQPSDFKHVAYSKLGPCQQICQTLQRYEPGQELQFYTKLIAECRKFLQES
LLMKDRKRITGIYLKALEKLFRLQNQSNMKFNSQPDSSFQVHENMDISAK
QGLEAKENRDTKRRIPHSIDVRESFGFTDTTTSEKHLVPDSHDYKMESGV
NFEHLTSDEKSKLARELKHDIRNTRSKIKLLKKKLIDPKFSDSKEDLKSD
IVHLRKELRTLKYQYNLLENRRKAKTGSTYEDLSSEMSSLLSDENSEIVP
AFPDGRKYTNVADKGKIKGCPTKSRNLDQTDDLSESSTLSSSTQTLVKSL
NKDLNQDRPRDTNVLIQSLGKDLSPGKSQHGVASPSRSFLAHAIKRDLTR
NDSETTIESVSMDEEDQLSVIDNIDGRQRNRTRYQPQCLNKQTQTTLLKS
PQTKNQQIQTEDYDLSIPGKTRRPWDRTTKDLQ
Run BLAST on NCBI

transcript from alignment at sc0000061:966942..985742+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005867 ID=TCONS_00005867|Name=TCONS_00005867|organism=Clytia hemisphaerica|type=transcript|length=18801bp|location=Sequence derived from alignment at sc0000061:966942..985742+ (Clytia hemisphaerica)
tttttaaaaatatcgaaacagaatttttaattcaaatctttcttcttCTT
ACACATGAAGGTCGATTgtaaaaacgaagaagaaaacgaagacaAAGCAT
GTATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAAG
AAGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGGT
GTAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCAG
ACATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgct
caagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAAA
AAGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATCG
ACAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGCC
AACAGATCTGTCAAACACTACAGAGGTATATTTTGTTTTATCAACCCTAA
AGGCCAAAAGCTTCATAAAAGTAGTAGTAAGTTTAGGTcccaaaggctcc
tctttcgattaCTATCTACCCAAAGGAAGAGGAGGGCGCTTcactttctc
cctggattgctccacttacccttgattcttctcttaattgctgagcatca
agcagagaagcatcaagtaccattttgagaatctttggtatgaccggGCT
GGGGGTCGAACGTCTACAACCTTGCGAGCCGTAGCCGGACGCTCTATccc
tgcactacggtcgctcaTAAAAGAAGATAAGTTCGGGGTCGGGTTAAACA
TCTTAATATCCCAACTGTCCAATTTCTTTGTATTGGCATGATCGAATAGG
TATGCGACCCTTGTAAACCGAAGTCGGTCTCCTTACAGGCTAAAGAGAGT
CCATGTGTATTCTATAGGCCCGTTAGTAAAATACCAAATAACCACAAAAA
TGGCTTTTGACACTCTCAAAATTATAGATCATATTGATAATTGAACATTC
AGGTAAatgataattcatgatatgcaccattgcaatgtcttccacggacc
caacaactgattggttgaaagtgacgtattgactgattctgcgtcactta
caaccaatcagctaatGGGTcggtgatgtaatgtcagaaggcATTGCAAT
GGGGGCCCTCCACATAGTATGTACgcactaaaattttgaaaatcgagtac
ccctccccccatgtacgcaagcatacgcaaatggctatacccccttggta
agtacgtactttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNtttcctttgacccctcccccccccctgtacgcaagc
atacgcttttgagaagacccccctccccccttagtgcgtacgtactatgt
ggacggccccatggtgcatatcattaattataataTTATAGTGCGAATTC
CTCATTTGCGCCATAAAATCCCTTATTTtaacgttctgtaaaataccaaa
caGGCAGAACACCGAATCTAAAGGCCTCTTTCAATAAATGAGAGGGAAAC
ACTCAAGAATATCTAAAACCATttaaggatattttttttcaatgatatAG
AAAGGAGATGACCAAGCATAAATAGCTATAGAATTTCTTGCTGGAGAAGA
GTaaattgttctttcttttgtttataaaaatgcTATATGTAAGCAGTTCT
ATACTGACCAAGCAAaataaacaatagaaattctcaaaacttgTTCGCGC
GGCACTGAaatttgtctgtacacagacctaGTACACGactaatttaaaaa
ttcattacagcagagggtctgttgtcattgttttttctcatttgagattg
ttcaaaccgaccgctgcgatgaaGTGTTGGTGAGAGGGGGAGACGACGAG
AAAAGTGTtgttatttataaatcatacttcgtagcagaggtctccgtaca
gGAATTCTTTTATAAAACAGGCAATGCGCACAGAGTTCACTACGAAGcaa
taaacgtgagatacactcttgTAAAGAGTACGCCGAACGGGGAGATAGTT
GTACCTTTTTTTGCTGTTTAATTAAATTGTAAGAGTTACGTTACAAATGA
TATgctttaaaattcttttttctgtAGGTACGAGCCAGGGCAGGAGCTCC
AATTTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGT
CTTTTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTT
GGAAAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCC
AACCAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAA
CAAGGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCA
CAGTATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAG
AAAAACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTC
AATTTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACT
TAAACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaaga
aattgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGAC
ATTGTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTT
GTTAGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTAT
CCTCTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCA
GCTTTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAAT
AAAAGGCTGTAAGTGTCTTTTATTTTACTGGTCATTAAGTTCGTGGTCTA
TCATTTCAGTACGATTAAttcagaaaataagaaaaaataaataatggaAG
AGAcaagttttagtttttagaaACTATGATAAGGACTCTAGTCTATAAAG
TTCTGCAAAGGAGAAAAGCAAAATGCTCTGAAAAGaatttaaacactttt
ttaccgtcctcgatttaaCCGGGCAATTACTAGATTATACCTAGCCGTGT
CAATAGACTGGTGTCGTTTAtgatgcgtgtaatacagtagcaCAGGCGTT
AtttgataatacgattattgttaggGGATTTAGCttgtataaactaaaaa
tttttccctctattactttttgctttatttctactatatctgaattagtc
gtctagcttgctagactacccagctggcacacaacgttgtttcaacgttc
atctaacgtcatatggacgttgtgaacgttagatgaacgttgaaacaacg
ttgtgtgcttgCTAGACTACCGTGTCAACCGTAGGCAAAAACGCGGAGAT
AAGCCTCTAGATTAATCCGTTGaggctctctaattcgacgtattcgatac
gctccattttTCGATTGTATTCAAAGTAGCTTTCAGCAAGAACACCCATA
AACGATGCTCAAGGTGTAGACcataaattacgttacaaacatcacttgcc
tcgttttgaaattattgccatggtgattatatcCTAGGGGATCTTATTAC
AACTACTTTATAttcataaaaatatcatttaatGCCTCAtaggacataat
caccatggtgaTTGTTGGTAAGTGATggtcgtgacgtaatttatgaaaaa
gtctatcTGATGAAAATTTACTTCCCCCTGGATTAGAGATAGCCAACTGt
gttttttgaatttgtttgaTTTACTAGGCCCAACGAAGTCAAGAAATCTC
GACCAGACTGACGACCTTTCAGAATCTAGTACCTTATCGAGCAGTACTCA
AACGCTGGTCAAATCCCTCAATAAAGATTTGAACCAGGATCGACCACGTG
ATACTAACGTGCTCATCCAATCTCTGGGTAAAGACTTGAGTCCAGGGAAA
TCACAACATGACGTGGCCTCACCCTCGCGNTCATCCAATCTCCGGGTAAA
GACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTCACCCTCGCGATC
GTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAAATGATTCCGAAA
CAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAGTTATCGGTTATT
GATAATATTGTAAgtgttattgttttcaaaagcttaactgaaatcGGAAA
TCTATATATCTTCCTACCACAGGGGATGGGGGATCAAGTGCGGACCCCGG
ACAACACTCTCTCTCAAACACTCTTTCTAGCCATTCCATTTATAAACTTT
TGATATAGGAGCTCCGATTCCGAAGTTAGACATATTAGGTCGAAAATATA
ATAATTCAGTCTAAAGTATTTATCTAGAGTTGCTTTGAAACGGCCggaga
aattattttcaattctttATAAGGAATGTTAcaaaaacactcttaaaagc
TATAAAGCCTATAACCTTTATTTGAGTGACCTTATGGTCCTGGTCATATC
CACCTTTGTGTAATTGTTAAGGGTAGGAGATCATCCTTCCAAATCAATTG
TTACCGGTAAATGAGAGATTCCCAAGATTTTCAATACTTCTTCATAACCA
AAAGAATGTCTTTCCACGGTTTTCCTCATTGAAACATTTACACTATCCAC
TGGATCTGGTAAAACAACTTTCAATTTACTCATTCCAATAAAGCATATGT
ATTTTGAGATCTCGCGTGATCTCAAATCAATCTTTATGACTCTATCACCG
ATCATATTTTCTGGAAAATTAACACAGAGGTTGTTCATGTCTTTGACAAG
TTTAACAATGGGTGACAGTCAGCTCCGTCTCAATTTAACTGCACTGAGGT
TTTTAATACCAAGATCAGTCAAATTCAGCTcaattaattttaaaagtttt
aatgtACCTAGGGAAGCAGCGTCCAATAAATAATTTTGACCTTTTGATAA
AGTGTTTGGAGGAACTCTGATCTTTAAGTTGAGTCGTTTGATTATATTTA
CGATTTCCTTTTCATATTTATTATAAATCCCTCCAACAGTCATAACTCGT
GTAAGTTCAATTGGATGTTTGAAGCAAATTCTACTTAGGCTTGTTTTACG
GCAAACCAGTTTTATCACTCGGATTAAATTTAGTTAGATTTAAGTTTAGA
CTAAAAAGTTTAGATTCAAAATAGataatcaaacaatctttgtcaATAAA
AGCTGCTGGTATATTCAATGAAATGTTAGGTGATTGGATCAATATATCGC
GGACGATTCTTAATGTACTCAACGTCGAACAGCTCACAATCTCTATGCAT
TTAAAATCTTTGTATGGTTCAGTATTAAAAAATCGGCCATGATATTCCAT
AAAAGATTCGCAATCCAAGCTCGTGTCATCAACCAGTAAGATATTTTCAT
TACCAAGCATACTTGTTGGCATTTGATAATTCAATTTTAGTCTCTCAAAA
ATTTCCCAAGGTTTTTCAATGATTGTTTCATTTAAGTCTTCGTTTTCGGT
TTGATATAAATTTGATTTTACCAACAATTCATTATCAtcgcaattttcaa
tttctttgtttcggcccatcattttcagttatctgGAGTTGTTTATAATC
TGTGTGTAATAAACAGTAATACACGCCTTTATAAGAATAGCGTACTTTtg
ttgagggtgagcattattcttatttttctattgttcctaactctgaaatc
tcaccctgatattcttatagaaattttatcttataaaaaaagcatgtatg
TATGTTACATGATGATATTATATAATTGTTACCGGATAATATCAATTTAT
CTTTcccataattttttttaaatttctactATATCTCTGAAATAGTCGTA
TAGCATGTTAGATTGCTGTCCTTGTAAAATATTAGGAACAGTTCTGCTAA
GATGCTTAGCAGTGTTGAGCACTCTTCGAACCAATATAATTTAATTTCGT
TTATTCCAGttgtaaaggcttggggacacgaggagtttttttcgcgttat
ggtgcaatgcaacatgctccatcccaccaacctgaaacgctttcttgtgt
ctccaccccatttttctttctaccaataaaagtgataCCGACAACACTTT
TATGGGTCACGAGATAAATACAGATTTTTGTATGATGGGACAAAACTTCT
ACAGCGTGGCTTTTGGGTATATCCCTCAGTGCTAGACATGAGTGCACTTT
TTctccaatgaaacaaaaaaaaaagaaaccatgagacacgcatttttttc
ttgtgctggtgggatggagcatgttgcatcaCCAAGCCTTTAAAAAGGTT
CAGAGACTAAACAACAGAATGTCCATTGGTAGAAATGTTTATCTCTCTGC
GCCTGCTTATTATAGTTCTATTTGATATTTTGTTCCACACTATCCATTCC
GTTCGATGTTAAAAACTTTCTGGTATTCACTTTAGTTTCTTCGTCCAATC
TTTTTTCTCAGCtctttttttgaataacaaaaTACTTTCTGATAGCACAT
TTTATTAGCTTAGCATGATTAATGTTAATTACTTTCGATTGGATAAGTTT
CCTAATTAATGCACTTTTTAAATGCTTGACTGCCATAGTTTCTAGTGACT
ACCACATTTTATACAAAACACTAGATAAAGCATTTCCTATCCTtcttgaa
gcaaaataatttaTTATCTTGGATGGAGTGACGTCACAGTTCAGCTTGAG
AGTTCCTTGAAATTCGAAGTCATTGTGgtgtcaaaaaagtttcaacagtA
AAAACCAAGGTTTCTACTGTGACTGTTTTGGCGAAGACGAAGTCTTTGAA
ATAAATGCGGTTGACACATATATTTTAAGCTAGAAAAGGAAAAACACAAA
CTAATTTAGAACTATATACAAACTCGAAANNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTCGTTGCCAGACGTTC
TTTTGGAATATCGCTCATCATTGGGAATTTTGTCGTCGCTCGGATGATCT
TACACGCACTGCAGTTTCTAATtatagttcttacaaagttttTGCCTGAT
ATCAACCAAAATTGATTTCGAAGGATTGCAAGTGTTGCTTCACGTCCACA
GTGGAAGTTTGATTCGTGGAAATGCCGTGTAAGAATTTTCGCGATGGGAT
GTTTGTTGCAGATGACGATTTGATGTTTACGAGTGTAGTCGACTTTTGCA
TGCTTGATACGACCACCAACACGAAGGATGCCATCATCATCTACGAACGG
TTTGAGTTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGACGGTTTCTGGATT
GTTGTAGCTACTGTTGCCAATGGATTCGAACCATGCCATTGCTGTCTTCA
ACTGTTGGTAGAAGTTTCTCAATCCTTCATGGTCGGTTATGGTGATTTGA
GGTCTGTCAAACATTTCTTTCAGCTTGAGATGAGCGATGACGTAAGGGTT
GCCATAATCACGTTTTAAGGCCTTCAGTGCTGTCGCGTAGAAGATAGAAT
TGGTTCCGATCGATTCAATAGAAGATCTTGCTGGTCCGTCCAGTACACTA
AGTAGTCTTTCCATTCTAATAGTGTCATTAAAACTACTTTTAAATGAATC
CTGGACTTGAAATTCTGTATGAATTCTGGCCATTGTAACGAACTACCATC
AAATCGTTTCAACTCAATAGGTGGCAGGTGTCTTGACTCGCactctacat
gttttttttttataagcaagtgtatgccccttggtcaggctcgtgtatgc
ttaagttctcaaagtatctaggcatagtttatgcttattatatgcttaag
aatcatgcttatgattcaccccgtgccaagtttttaatgaaatttcagaa
actttgtaaaaatttgttcagattttggaagCAGTGGAATGTTAGCTAGC
Cgtgaattgtcttattttttacttgacctctaccaaacctttttaaacag
ataaaaatgaccacttgaaaaatattttaggctgacatatatgctcatgt
tatgcttaggaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCG
AAATTtcttaaaagtttgttttggcGAAGACGAAGTCTTTGAAATAAATG
CGGTTGACACATATATTTTAAGCTAGAAAAGGAAAAACACAAACTAATAT
AGAACTATATACAAACTCGAAAGCTTAAGCTAAGATAAATCTCGATAAAT
CTCAATAgatcaaaaatatacaaatgtACAATACAAAACTATACTTACAA
ATTTCGTCACATATATTCACGATTGAATGCCAAAACAAATGCACGATAtg
caaaaatcccaaaaaatatCTCAAAGTTCGAACGAAACTCAAAACATTTC
TGTGTTAATAAATTCGAGAACGATTTTCTCTGACACGTCTCATCTCAACA
AGTTTCTCAAGTGAAGTGCAAAAAAAGGCGATGGAAAAAACCTATAAagt
aaaaaactaattaaaaatagacaaaagacGCACGATACAATACACATGAC
GATACGCACAACACATAACACTAAAATGCTAATTACCCAACGCAACATCA
TTAATTAGCGAAAACAGTGACCTACTTTCAGaaaagatggcgcattattt
tgctgCACCTGCCATTGCTTGGGAGATACATAGTAGCTCTATCtctagtg
ttttttataagatatctgtggttccCACCCCTGACTCACCCTAGCATTTC
AATATCAGATTTTAAGTAAAAGAGTcttcatgaaaaaaattgtagGCTTT
ATGGTCAAAGGACGTCATTTAACGTATTCCCTACCATCTGTTTACATAGC
ACGAAAGAACAACTTTGTCCTCTTTCGGTGCCATGTGAGcacaaattttc
agaaattctttggtttattctgctttgtcagcaaagAGGCGCGCCTATTT
TCTTCAGTATATCCTCAAAAAAAATGTCATCAAGAGAATCGAAGTCTTCT
TAGcttatcatatttttttctagGACGGAAGACAAAGAAACCGAACACGC
TATCAACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATC
TCCTCAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTA
TTCCTGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAA
G

Coding sequence (CDS) from alignment at sc0000061:966942..985742+

>TCONS_00005867 ID=TCONS_00005867|Name=TCONS_00005867|organism=Clytia hemisphaerica|type=CDS|length=7995bp|location=Sequence derived from alignment at sc0000061:966942..985742+ (Clytia hemisphaerica)
ATGTATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCA
AGAAGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATG
GTGTAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGC
AGACATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGg
ctcaagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGA
AAAAGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAAT
CGACAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTG
CCAACAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCC
AATTTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGT
CTTTTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTT
GGAAAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCC
AACCAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAA
CAAGGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCA
CAGTATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAG
AAAAACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTC
AATTTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACT
TAAACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaaga
aattgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGAC
ATTGTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTT
GTTAGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTAT
CCTCTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCA
GCTTTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAAT
AAAAGGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTT
CAGAATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTC
AATAAAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCA
ATCTCTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCT
CACCCTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGA
AATGATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCA
GTTATCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCT
ATCAACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCT
CCTCAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTAT
TCCTGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAAA
TGTATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAA
GAAGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGG
TGTAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCA
GACATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgc
tcaagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAA
AAAGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATC
GACAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGC
CAACAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCCA
ATTTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGTC
TTTTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTTG
GAAAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCCA
ACCAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAAC
AAGGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCAC
AGTATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAGA
AAAACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTCA
ATTTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACTT
AAACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaagaa
attgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGACA
TTGTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTTG
TTAGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTATC
CTCTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCAG
CTTTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAATA
AAAGGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTTC
AGAATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTCA
ATAAAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCAA
TCTCTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTC
ACCCTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAA
ATGATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAG
TTATCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCTA
TCAACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCTC
CTCAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTATT
CCTGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAAAT
GTATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAAG
AAGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGGT
GTAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCAG
ACATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgct
caagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAAA
AAGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATCG
ACAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGCC
AACAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCCAA
TTTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGTCT
TTTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTTGG
AAAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCCAA
CCAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAACA
AGGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCACA
GTATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAGAA
AAACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTCAA
TTTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACTTA
AACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaagaaa
ttgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGACAT
TGTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTTGT
TAGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTATCC
TCTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCAGC
TTTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAATAA
AAGGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTTCA
GAATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTCAA
TAAAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCAAT
CTCTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTCA
CCCTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAAA
TGATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAGT
TATCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCTAT
CAACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCTCC
TCAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTATTC
CTGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAAATG
TATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAAGA
AGTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGGTG
TAGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCAGA
CATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgctc
aagatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAAAA
AGAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATCGA
CAACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGCCA
ACAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCCAAT
TTTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGTCTT
TTAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTTGGA
AAAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCCAAC
CAGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAACAA
GGTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCACAG
TATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAGAAA
AACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTCAAT
TTTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACTTAA
ACACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaagaaat
tgattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGACATT
GTACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTTGTT
AGAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTATCCT
CTGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCAGCT
TTCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAATAAA
AGGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTTCAG
AATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTCAAT
AAAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCAATC
TCTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTCAC
CCTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAAAT
GATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAGTT
ATCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCTATC
AACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCTCCT
CAGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTATTCC
TGGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAAATGT
ATTTAGCAAGCTTAAAGCTGAAATATAAGAGCGTTTACAATGGGCAAGAA
GTCATTGAAAAACATTCAGACATCCAGATACCGTACAAGTTAAATGGTGT
AGAACCTTGTGGCAGACATGCTCTAGACCAGAGTGAAGCTGGTAGCAGAC
ATGCTCTTGATGACAGTGGATTTCAGTCAATGATTATAGACAATGgctca
agatttttgaaaagatcgctggattcaaataATGGGGATTTACCGAAAAA
GAAATCGacaaatttgatcaaatctCATGTTTCAAGTTCAATGAATCGAC
AACCAAGTGATTTCAAACATGTGGCATACTCAAAGTTGGGTCCTTGCCAA
CAGATCTGTCAAACACTACAGAGGTACGAGCCAGGGCAGGAGCTCCAATT
TTACACCAAATTGATTGCAGAATGCCGGAAATTTCTTCAAGAAAGTCTTT
TAATGAAAGATCGGAAACGCATAACCGGAATCTATTTGAAAGCTTTGGAA
AAACTATTTCGATTACAAAATCAATCGAACATGAAATTCAATTCCCAACC
AGATTCTTCGTTTCAAGTCCATGAAAATATGGATATAAGTGCTAAACAAG
GTTTGGAGGCTAAGGAAAATCGTGATACAAAAAGACGGATTCCTCACAGT
ATTGATGTGAGGGAATCGTTCGGTTTTACAGACACTACAACATCAGAAAA
ACATTTGGTGCCCGATTCACATGATTACAAAATGGAATCTGGTGTCAATT
TTGAACATTTGACAAGTGACGAGAAATCAAAACTGGCTCGAGAACTTAAA
CACGATATTCGAAATACaagatcaaaaatcaaattactgaaaaagaaatt
gattgaTCCCAAATTTTCGGACAGTAAAGAAGATTTAAAATCGGACATTG
TACATTTACGGAAAGaactaagaacattgaaatATCAATATAATTTGTTA
GAAAATCGAAGAAAAGCTAAGACAGGTTCTACTTATGAAGATTTATCCTC
TGAGATGAGCAGTCTGCTGAGCGATGAGAATTCGGAAATTGTTCCAGCTT
TCCCGGATGGTCGAAAATATACAAATGTTGCTGACAAAGGGAAAATAAAA
GGCTGCCCAACGAAGTCAAGAAATCTCGACCAGACTGACGACCTTTCAGA
ATCTAGTACCTTATCGAGCAGTACTCAAACGCTGGTCAAATCCCTCAATA
AAGATTTGAACCAGGATCGACCACGTGATACTAACGTGCTCATCCAATCT
CTGGGTAAAGACTTGAGTCCAGGGAAATCACAACATGGCGTGGCCTCACC
CTCGCGATCGTTTCTTGCGCATGCCATCAAGAGAGATTTAACAAGAAATG
ATTCCGAAACAACTATAGAAAGTGTGAGCATGGATGAGGAAGATCAGTTA
TCGGTTATTGATAATATTGACGGAAGACAAAGAAACCGAACACGCTATCA
ACCACAATGTTTAAATAAGCAGACTCAAACAACTCTGTTAAAATCTCCTC
AGACGAAAAACCAACAAATTCAAACAGAAGATTATGATCTTTCTATTCCT
GGTAAAACCAGAAGACCCTGGGACCGAACCACAAAGGATTTGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003351XLOC_003351Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005867-exon-sc0000061-1491911889:966942..967416TCONS_00005867-exon-sc0000061-1491911889:966942..967416Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1510915933:966942..967416TCONS_00005867-exon-sc0000061-1510915933:966942..967416Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1575043694:966942..967416TCONS_00005867-exon-sc0000061-1575043694:966942..967416Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1491911889:969369..970099TCONS_00005867-exon-sc0000061-1491911889:969369..970099Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1510915933:969369..970099TCONS_00005867-exon-sc0000061-1510915933:969369..970099Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1575043694:969369..970099TCONS_00005867-exon-sc0000061-1575043694:969369..970099Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1491911889:971019..971198TCONS_00005867-exon-sc0000061-1491911889:971019..971198Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1510915933:971019..971198TCONS_00005867-exon-sc0000061-1510915933:971019..971198Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1575043694:971019..971198TCONS_00005867-exon-sc0000061-1575043694:971019..971198Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1491911889:971267..971400TCONS_00005867-exon-sc0000061-1491911889:971267..971400Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1510915933:971267..971400TCONS_00005867-exon-sc0000061-1510915933:971267..971400Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1575043694:971267..971400TCONS_00005867-exon-sc0000061-1575043694:971267..971400Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1491911889:985565..985742TCONS_00005867-exon-sc0000061-1491911889:985565..985742Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1510915933:985565..985742TCONS_00005867-exon-sc0000061-1510915933:985565..985742Clytia hemisphaericaexon
TCONS_00005867-exon-sc0000061-1575043694:985565..985742TCONS_00005867-exon-sc0000061-1575043694:985565..985742Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005867-proteinTCONS_00005867-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:966942..985742 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.357398	0.34852	0.107911	0.0791802	0.739023	0.406251	1.37848	1.63465	0.421642	0.497401	1.11042	0.349104	0.491235	0.658261	0.121766	0.159712	0.286184	0.421661	0.481235	0.874635	1.01362	0.606775	0.136595	0.198696	1.61164	2.12327	0.0653419	0.0697346	0.0528912	0.107776
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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