|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005865 ID=TCONS_00005865|Name=TCONS_00005865|organism=Clytia hemisphaerica|type=transcript|length=513bp
aaagatggcagatattgcttggtccagggttatataaaggtcagtggatg
agcccaaaaaagggatatttgattaaaaaaacgtCATTTTTTGTGAAGAA
GCCATTACACTGACGAATAAATTGATGGCgtcataaaaatatatttcact
ttttttaccgTTTGGTTTACCAGTTGGTACAGAAGTTGAGCagataatca
aaatttttgaactcCCAAGAATTGAATtcagaaaataaattaaaaccTTA
ATCAAAGATGGCGTGTGTTGGTGCATCAGAGGAACTTTTCTTCTGTAATC
TGATGATGGATTTGAAGGACAGTGGTATCAACATTGTACACGAGAAGAAG
GAAACAGCTGAAGAAAAAAACGCAGGTTGTAAGGACGAAGTGACGGATCC
AGGCAAGAAACAAAACAATCCACCTGTCAAATTCTACAAAGGAAAACAGC
GAGCGAAAAAGAAACGAAGACAAAGAGCTGGCTTCTAGTGTATGCAGAAT
CATGAGTATTTGA Run BLAST on NCBI transcript from alignment at sc0000061:800747..802060+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005865 ID=TCONS_00005865|Name=TCONS_00005865|organism=Clytia hemisphaerica|type=transcript|length=1314bp|location=Sequence derived from alignment at sc0000061:800747..802060+ (Clytia hemisphaerica)
aaagatggcagatattgcttggtccagggttatataaaggtcagtggatg
agcccaaaaaagggatatttgattaaaaaaacgtCATTTTTTGTGAAGAA
GCCATTACACTGACGAATAAATTGATGGCgtcataaaaatatatttcact
ttttttaccgTTTGGTTTACCAGTTGGTACAGAAGTTGAGCagataatca
aaatttttgaactcCCAAGAATTGAATtcagaaaataaattaaaaccTTA
ATCAAAGATGGCGTGTGTTGGTGCATCAGAGGAACTTTTCTTCTGTAATC
TGATGATGGATTTGAAGGACAGTGGTATCAACATTGTACACGAGAAGAAG
GAAACAGCTGAAGAAAAAAACGCAGGTTGTAAGGTAAATAATTTTATGCA
CAGTTTGAGTTGGACCTTCAAAATGTTGGTCAGAATTTCATTTATTTAGG
AAATCAGCGGTTTTGCTCGGACCAGCATGCTGGTCAATAAGTAGGTCAAT
GACTGCAACCTTGAACAGGGAACCTTTTAAACAGTCCTAGTAAAAAACGA
CCTTAATAAGTGTGAACGGTGATGTTTTTTGAACGGTAGTTTTATCATGT
TGGCTTTAGCAATATTGTGCTACTGATAGTATTCACTCCTCACCGTACTA
TGCAAAAACGCTTTGCCAAGTTCGCCCAAACAAGTTTCCTGGCTCACAAG
TTGTCTCTCAGCTTTTGGTTATTTTCGGAGCCAAATCCATTCTTCTAAAA
TATTCTGCTTCGCGAGTCCTTCTTCCATTTTCGGGTTTTTAatagcccag
ctggcacacaacgttgtttcgacgtttctctaacgttcacaacgtccata
taacgttaaatgaaggttgaaacaacgttgtgtgacaGCTGGGAGACTGA
AAACGATTGCAGAtcttccaccattatggaaaaaaacatttgattttttg
atataGGAAAGGGAGATCGACAAAattcaaggtttttttttcttccaaat
atacaaaatatacaaaagcTTTTCTCAAGGTTTGTCCTTTTTGgcgtttt
tcaggatttttattgtttttgttgtctaatttatgtattttattCATAAC
TTATATATTCAGTATGGCTACAAAATAgaagaacaaatgaaatctgaaaA
AGCTCTTCTTATTTTTGTCCATTCTTTTACAAAGGACGAAGTGACGGATC
CAGGCAAGAAACAAAACAATCCACCTGTCAAATTCTACAAAGGAAAACAG
CGAGCGAAAAAGAAACGAAGACAAAGAGCTGGCTTCTAGTGTATGCAGAA
TCATGAGTATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005865-exon-sc0000061-1491911889:800747..801129 | TCONS_00005865-exon-sc0000061-1491911889:800747..801129 | Clytia hemisphaerica | exon |
| TCONS_00005865-exon-sc0000061-1510915933:800747..801129 | TCONS_00005865-exon-sc0000061-1510915933:800747..801129 | Clytia hemisphaerica | exon |
| TCONS_00005865-exon-sc0000061-1575043694:800747..801129 | TCONS_00005865-exon-sc0000061-1575043694:800747..801129 | Clytia hemisphaerica | exon |
| TCONS_00005865-exon-sc0000061-1491911889:801931..802060 | TCONS_00005865-exon-sc0000061-1491911889:801931..802060 | Clytia hemisphaerica | exon |
| TCONS_00005865-exon-sc0000061-1510915933:801931..802060 | TCONS_00005865-exon-sc0000061-1510915933:801931..802060 | Clytia hemisphaerica | exon |
| TCONS_00005865-exon-sc0000061-1575043694:801931..802060 | TCONS_00005865-exon-sc0000061-1575043694:801931..802060 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:800747..802060 + |
Blast
The following BLAST results are available for this feature:
|
