TCONS_00005835 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005835
Unique NameTCONS_00005835
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1807

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005835 ID=TCONS_00005835|Name=TCONS_00005835|organism=Clytia hemisphaerica|type=transcript|length=1807bp
AGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACCTCTta
aaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttcaatcaa
ttcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAATGTACA
GCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAAAGCGG
ATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGTTTACC
AAAGACTCAGATCCaaactttttcattaaaaAGCAAGACTTGAAAGAGGG
GAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAACATGA
GGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGCGAGATGAATCA
AATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTTCACTTTTGGCC
GTTCGAAACAAACAAAGGAATATTGACAAGCGATTTGATCACTGGTTCAG
ATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGAGCACCAAAT
TCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGTCACAT
GCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAGTTCCA
ATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTTTCGAC
TCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGATTT
TAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACGGGATGA
CCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGTACACAA
AATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCAATCTAA
GAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGTCATGG
TTATCAGTACCGaaacaaaacaatggaaattaGAAATGCCgaaagataaa
ataaaacacGATGAATGGGTCCagctttcttttgtttggaataCAGACAC
ATTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGGCGTGG
CCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGACGTCCG
AATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCTTATTT
GACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATCATATG
AAAATATAAAACAAAAGATCGATAAGACGAGGAGACGTagtattttagaa
aaacattctACCATACAACAGCACGCATTGGTGAACAGGGAAATGCAAAA
CTAAACAGCTGAATTCATGTAACTTGACAGAGATACTGAATCACCATACA
AGAAGCTCTCCGAGAAACCATGTCTTGAAATAAGGCGACGGTGTGATGTA
GAAAAATTAAGAACTTTTGCGTGTGTAAAATACAGACCAATTCGCTTCGT
ATGCTAATGACCCTACGAGGAAAATTTCGATAGGCTTAACGTATAGCCGT
CATATCATTCGAACTAAATAAAGTGTTATgaaaattttgtaataaaaatc
aatGATAATCAACCGTCAGTTTGAAACGCCTGTAATGTTTTACTACTGAT
TAAAACAATAATAATACTTTCCCAAGAATTTATTTTGGTGGgctaaaaat
ttgatttgatttgatttgattaagTAGCTCCCGCTTTTTTGGAATCTTGA
ATTATTTCTagtaattatattttttaaatgcatgtaaataaattaaaaga
aaattaa
Run BLAST on NCBI

protein sequence of TCONS_00005835-protein

>TCONS_00005835-protein ID=TCONS_00005835-protein|Name=TCONS_00005835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
GNSNSITSFQRDRTPLKPSKNSEEKSAHENFNQFNLDNAKSSNTDGENVQ
HSGGSSNPYVHADEKADLVQKPSLLSTSGETFTKDSDPNFFIKKQDLKEG
SVAKRDSSNNPPPPNMRLFEKQKQVTGRKRDESNGILTSDPFLEAVHFWP
FETNKGILTSDLITGSDAILMGGAKITKKGAPNSPQGQQNYYNTQGASHM
PSQQQQMPPHRKRSSSNHLQVRREEEEDVEVFDSFLDTKMNGSYVIAGDF
NGTCFSDPDLCKLNGMTIYTWLKIDAKELESTQNAIGRDAYILSTGGQSK
KSRGFAFLWFHGKFVMVISTETKQWKLEMPKDKIKHDEWVQLSFVWNTDT
LTGYQDGTKIGSTKGVAAERPEVQFTIMTIGRPNNAVDARFMMKMEMAYL
TLWDKALEVKELDKSYENIKQKIDKTRRRSILEKHSTIQQHALVNREMQN
Run BLAST on NCBI

transcript from alignment at sc0000061:151191..156461+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005835 ID=TCONS_00005835|Name=TCONS_00005835|organism=Clytia hemisphaerica|type=transcript|length=5271bp|location=Sequence derived from alignment at sc0000061:151191..156461+ (Clytia hemisphaerica)
AGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACCTCTta
aaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttcaatcaa
ttcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAATGTACA
GCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAAAGCGG
ATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGTTTACC
AAAGACTCAGATCCaaactttttcattaaaagtaaaataatttttctgat
attttcacACAAATTAGAGCTGTAAAAAATGTCATATCTGATCCAAAAGA
TCAGCTGCAGTAGTTATTCACTGGGTAGCAGGGGGGAGGTACGAAAGGGA
AAATGCCAAAACGCACTTTTTTGTTACAGTaatgaacaaaataaaataac
taGATTTTAGTGAGGTACTCGTCAGTGTTAGGTctgctttcaaaattttc
atttgaaatatttgacaACGCAGAGACCATTTGAAGCCGCGACAGtgact
ttttaaatgtttttctctCTTTAGAGCAAGACTTGAAAGAGGGGAGTGTA
GCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAACATGAGGCTATT
TGGTAAGTACACTTCTTTATTCAAACCATCTAATTTGGTTAGTTTAATGG
GTTATTGTGCACTCTGAGGAAAAGACGTTTTATCTGGCCCCTCCCCTATG
ATAATATATACTAAGATACGGTATATTGGACGTTTTTCCTGTAGCAGGGT
GTTTAAGTAGATAGAAAGATAGAAGGTAGATCAAATACCAACAGCTATTT
GAATATTCCATTTTTCCAAGACGGGAATCCAAGAGATGCGACTTTGGAGG
TTAAATTCTTGGAGTAAATCTGATTTCGATTCTTAAGCTCATATTCagca
ttgaaataaaaatgcacAAAATGTGCAAATAAACAGATTGACCAAAACTG
CATAGCTTCTTCCCAGCAATATatcatttcaaaatatatagACCGCATCT
AGAACTAGATCCTATAAAGTTAAAGGAGGATGGGTTTGTTGATATTTTGG
GGGCTTCTTTTACAAGTGATATTGATGTGCAAATGTGATAatcttttaga
aaaacaaaagcAGGTTACTGGCAGAAAGCGAGATGAATCAAATGGTATTC
TAAGTAAGtttgtttattgttttgttCATATTAAACTTTATAATATGGTA
TTTGTGTGTTTATCGAAAATCTAGAACAGTCTTCATAAACGTCTTCTACG
AGTTTGCGATTTGTGATAATAAACTTAAGCAGCTGAAAATAATTTCATAT
ATTCctctttttttcataagaaccagtaaattcttgTTTCGACTCGGCTC
TTCATATCATTTTGACACTTGGAGCTTCATATTGTTTTTATACTGTTTGC
ATTCGAAAAATCGAGGCTTTTTTGCACTTTAAACCTATAAATGtttgaaa
ttcagcaatttCAGGCTCAGGATTCAGGAGATTCATTTTCTAATAAAATT
GCTCTTATAAaataaagagcttcattataatgtAAAACCAATAACTTCTT
GCAGCATCGGATCCATTTCTCGAGGCCGTTCACTTTTGGCCGTTCGAAAC
AAACAAAGGAATATTGACAAGCGATTTGATCACTGGTTCAGATGCTATCT
TAATGGGTGGAgctaaaatcactaaaaaaggtTAGTAGTTATAAATCTAG
TACAAACCTTATTCCCATAGCGAATCTTCGTGTTTTCCGCCGGATGGTGT
TCGACCCACAGatttttaaagcccgaagggctagatgtcgtgctttaagc
catcgcaggctgAATATTGAATATCGCAAGAAATAtagtttctattgttt
tcgaaaatccgcgaagcttctgattggtcaagcgctgaaattctattata
atgtcacgttacctaggtaggatttcctacctaaccgcggcacacttttc
aacaagagcacgacatctagcccttcgggctttacaaatcTGTGGGACCC
AATTAAAATAATCAAAGGGTTGTCTAAAGGTCCCATATTATACCCTTCAA
TGCATGTTAAATTAAATACACAAGGGCCTCCTCTTCTACACTCTTCAACC
ACTTAAACACTCCTGCGTCAAAGACCCGGCCCCGACCCCGGCCCCCAACC
CCGACCCCGGCCCCGACCCCGGCCCCCGTCCCCGACCCCGACCCCGACCC
CGACCCCGACCCCGACCCCGACCCCGACCCCGACCCCGACCCCCGCCCCC
GCCCCACTGGTAAATTCAcccaatttcagacccaatggTAAATTGACGTT
GATTTCATCCTcacttgaaattcaatggaaataTTGCACTCCAAAAGATC
CCATTAGGAATTCTTTagctgggaacaatagaatttcgatTAAAATACTG
AAGAAAAATCACCTTAAGACAATCCAAAAGAGAATATAACCTTTAAGAAT
CCAAAACTCTTTATACCAATATCATTTTTTTCCATCAAAGGAGCACCAAA
TTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGTCACA
TGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAGTTCC
AATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTTTCGA
CTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGATT
TTAATGGTAAGAAACAAACACCATTTATCATGATATTAGACTTAGAATTC
ATAAAAATGAAAGCGAGTTCGGAAAAAGACTTGATACCAGTCGAGCGTGG
CGGCTCGACCAAAATTTAAGCAAACTGGGAAGACAATTTTAGGATTTTGG
GATCTTTCCGTCCCCTATTAAACGTAAGATATCCAGAATATGACCAGAAT
AGGATTCCAAGCTAATTTTAATAATCTTCTTCAAAGTATTTTGGTACGTT
TTCCTCGACAGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACG
GGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGT
ACACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCA
ATCTAAGAAATCACGAGGTTGGTTTACATTCAAATATTGCAcgtaaggcg
aaaataaaaaaatatagtgtttccggaatgcagGTAAAGGAAAAAGGCTC
TCACGCGGCCggccgaaaaaattttttttgctaatcattgaaatagagct
ttaaaaataacttttatttacaaacagtatgaagtaagccctgaatacta
atgcaTCAACTAATAACGagcaaaacttgatttacaagcgagaatatcta
accaaacgacgtttgatagcttggacggtcaacttgatttttttcccCGG
CCGCTTTCCGGAAACactgcatttttttattttcgcctaacgGATAATTA
ATTTGGATTGATTTTGTATCACGTAATCAGAAGTAATTAGGATAATTTGA
AGTTCCTTCGGACAACCTATATTTCTAGCCTTGTGCACAATGTCGGTTCG
AGCTGGAGAATTCCTACGAGCTCTACAATTTAATTTACACAATTTTTCTA
TTTCAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGTCATGGTTATC
AGTACCGaaacaaaacaatggaaattaGAAATGCCgaaagataaaataaa
acacGATGAATGGGTCCagctttcttttgtttggaataCAGACACATTAA
CTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGGCGTGGCCGCT
GAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGACGTCCGAATAA
TGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCTTATTTGACGT
TATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATCATATGAAAAT
AGTAAGTATTATTTGTACTCATTGCGTAGCACAACCCTGTAGTGTTAATG
TACCTAGAAAAATGTTAACTCTGATCATTTACTGATTAAACCAGGAAGTT
TTTACCTTGATTTAACAACTTCAAACTTGGTAAAATGaataattttatgg
attttaaactgaataaaaatgttcgactTTTACAGGGTCGATAGTGAATG
AAGAATTTTAGAAtctaggcgaaaataaaaaatgcagtgtttccggaatg
cggctGAAGGAAAAAGGCTCTTATGCAGCCGGTcggaaaaagcttttttt
ttgctaattttgataacttaagatcattgtaatagaactttaaagatgac
ttttatgtacaaacaatATGAAATAAGCCCTGAATACAgctgtatcaact
actaacgaacaaaacttggtttacaagcgggaatatctaaccaaacaaCG
TTTGATAGCTTGGACGGTCAACTTGATTTCCTTTATGAAaaaccatatag
atgaacccatagtctgcggccgggtgagaaaatactttttgttcacccgg
ccggtttccggaaacactatttttttattttagccctattttctatgttt
tataAGGGAAAATTGACTGAAATTACTAAATTagatttttaattactttt
caACAAATCATTGTTAACTTCGTTCATAGACCTGacattcgataaaaaat
tccattttttattGTTATAGTAAAACAAAAGATCGATAAGACGAGGAGAC
GTagtattttagaaaaacattctACCATACAACAGCACGCATTGGTGAAC
AGGGAAATGCAAAACTAAACAGCTGAATTCATGTAACTTGACAGAGATAC
TGAATCACCATACAAGAAGCTCTCCGAGAAACCATGTCTTGAAATAAGGC
GACGGTGTGATGTAGAAAAATTAAGAACTTTTGCGTGTGTAAAATACAGA
CCAATTCGCTTCGTATGCTAATGACCCTACGAGGAAAATTTCGATAGGCT
TAACGTATAGCCGTCATATCATTCGAACTAAATAAAGTGTTATgaaaatt
ttgtaataaaaatcaatGATAATCAACCGTCAGTTTGAAACGCCTGTAAT
GTTTTACTACTGATTAAAACAATAATAATACTTTCCCAAGAATTTATTTT
GGTGGgctaaaaatttgatttgatttgatttgattaagTAGCTCCCGCTT
TTTTGGAATCTTGAATTATTTCTagtaattatattttttaaatgcatgta
aataaattaaaagaaaattaa

Coding sequence (CDS) from alignment at sc0000061:151191..156461+

>TCONS_00005835 ID=TCONS_00005835|Name=TCONS_00005835|organism=Clytia hemisphaerica|type=CDS|length=10824bp|location=Sequence derived from alignment at sc0000061:151191..156461+ (Clytia hemisphaerica)
GGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACCTCTtaa
accatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttcaatcaat
tcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAATGTACAG
CATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAAAGCGGA
TCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGTTTACCA
AAGACTCAGATCCaaactttttcattaaaaAGCAAGACTTGAAAGAGGGG
AGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAACATGAG
GCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGCGAGATGAATCAA
ATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTTCACTTTTGGCCG
TTCGAAACAAACAAAGGAATATTGACAAGCGATTTGATCACTGGTTCAGA
TGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGAGCACCAAATT
CACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGTCACATG
CCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAGTTCCAA
TCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTTTCGACT
CGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGATTTT
AATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACGGGATGAC
CATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGTACACAAA
ATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCAATCTAAG
AAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGTCATGGT
TATCAGTACCGaaacaaaacaatggaaattaGAAATGCCgaaagataaaa
taaaacacGATGAATGGGTCCagctttcttttgtttggaataCAGACACA
TTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGGCGTGGC
CGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGACGTCCGA
ATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCTTATTTG
ACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATCATATGA
AAATATAAAACAAAAGATCGATAAGACGAGGAGACGTagtattttagaaa
aacattctACCATACAACAGCACGCATTGGTGAACAGGGAAATGCAAAAC
TAAGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACCTCT
taaaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttcaatc
aattcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAATGTA
CAGCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAAAGC
GGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGTTTA
CCAAAGACTCAGATCCaaactttttcattaaaaAGCAAGACTTGAAAGAG
GGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAACAT
GAGGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGCGAGATGAAT
CAAATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTTCACTTTTGG
CCGTTCGAAACAAACAAAGGAATATTGACAAGCGATTTGATCACTGGTTC
AGATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGAGCACCAA
ATTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGTCAC
ATGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAGTTC
CAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTTTCG
ACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGTGAT
TTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACGGGAT
GACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGTACAC
AAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCAATCT
AAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGTCAT
GGTTATCAGTACCGaaacaaaacaatggaaattaGAAATGCCgaaagata
aaataaaacacGATGAATGGGTCCagctttcttttgtttggaataCAGAC
ACATTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGGCGT
GGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGACGTC
CGAATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCTTAT
TTGACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATCATA
TGAAAATATAAAACAAAAGATCGATAAGACGAGGAGACGTagtattttag
aaaaacattctACCATACAACAGCACGCATTGGTGAACAGGGAAATGCAA
AACTAAGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAACACC
TCTtaaaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatttca
atcaattcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAAAAT
GTACAGCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGAAAA
AGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGACGT
TTACCAAAGACTCAGATCCaaactttttcattaaaaAGCAAGACTTGAAA
GAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACCTCCTAA
CATGAGGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGCGAGATG
AATCAAATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTTCACTTT
TGGCCGTTCGAAACAAACAAAGGAATATTGACAAGCGATTTGATCACTGG
TTCAGATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGAGCAC
CAAATTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCCAGT
CACATGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAGTAG
TTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAGTTT
TCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCTGGT
GATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAACGG
GATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGAGTA
CACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGCCAA
TCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAAATTTGT
CATGGTTATCAGTACCGaaacaaaacaatggaaattaGAAATGCCgaaag
ataaaataaaacacGATGAATGGGTCCagctttcttttgtttggaataCA
GACACATTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAAGGG
CGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTATCGGAC
GTCCGAATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAAATGGCT
TATTTGACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAAATC
ATATGAAAATATAAAACAAAAGATCGATAAGACGAGGAGACGTagtattt
tagaaaaacattctACCATACAACAGCACGCATTGGTGAACAGGGAAATG
CAAAACTAAGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCGAAC
ACCTCTtaaaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaaatt
tcaatcaattcaATCTCGATAACGCGAAATCATCAAACACAGACGGCGAA
AATGTACAGCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGACGA
AAAAGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAGAGA
CGTTTACCAAAGACTCAGATCCaaactttttcattaaaaAGCAAGACTTG
AAAGAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACCTCC
TAACATGAGGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGCGAG
ATGAATCAAATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTTCAC
TTTTGGCCGTTCGAAACAAACAAAGGAATATTGACAAGCGATTTGATCAC
TGGTTCAGATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaagGAG
CACCAAATTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGAGCC
AGTCACATGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAGAAG
TAGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAGAAG
TTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATCGCT
GGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTTGAA
CGGGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGGAGA
GTACACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGTGGC
CAATCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAAATT
TGTCATGGTTATCAGTACCGaaacaaaacaatggaaattaGAAATGCCga
aagataaaataaaacacGATGAATGGGTCCagctttcttttgtttggaat
aCAGACACATTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCACCAA
GGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTATCG
GACGTCCGAATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAAATG
GCTTATTTGACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGATAA
ATCATATGAAAATATAAAACAAAAGATCGATAAGACGAGGAGACGTagta
ttttagaaaaacattctACCATACAACAGCACGCATTGGTGAACAGGGAA
ATGCAAAACTAAGGTAATAGCAACTCAATAACATCTTTCCAACGTGACCG
AACACCTCTtaaaccatcaaagaattcgGAAGAAAAATCCgcgcatgaaa
atttcaatcaattcaATCTCGATAACGCGAAATCATCAAACACAGACGGC
GAAAATGTACAGCATTCCGGCGGTAGCAGTAATCCTTACGTACATGCAGA
CGAAAAAGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTGGAG
AGACGTTTACCAAAGACTCAGATCCaaactttttcattaaaaAGCAAGAC
TTGAAAGAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACCACC
TCCTAACATGAGGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAAAGC
GAGATGAATCAAATGGTATTCTAACATCGGATCCATTTCTCGAGGCCGTT
CACTTTTGGCCGTTCGAAACAAACAAAGGAATATTGACAAGCGATTTGAT
CACTGGTTCAGATGCTATCTTAATGGGTGGAgctaaaatcactaaaaaag
GAGCACCAAATTCACCGCAAGGGCAACAAAATTACTACAATACACAAGGA
GCCAGTCACATGCCATCGCAACAACAACAAATGCCACCGCACCGAAAGAG
AAGTAGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATGTAG
AAGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTTATC
GCTGGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAAGTT
GAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAATTGG
AGAGTACACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACTGGT
GGCCAATCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGGTAA
ATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaattaGAAATGC
CgaaagataaaataaaacacGATGAATGGGTCCagctttcttttgtttgg
aataCAGACACATTAACTGGTTATCAAGATGGGACCAAAATAGGTAGCAC
CAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGACTA
TCGGACGTCCGAATAATGCAGTCGACGCACGCTTCATGATGAAAATGGAA
ATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGTAAAAGAACTCGA
TAAATCATATGAAAATATAAAACAAAAGATCGATAAGACGAGGAGACGTa
gtattttagaaaaacattctACCATACAACAGCACGCATTGGTGAACAGG
GAAATGCAAAACTAAGGTAATAGCAACTCAATAACATCTTTCCAACGTGA
CCGAACACCTCTtaaaccatcaaagaattcgGAAGAAAAATCCgcgcatg
aaaatttcaatcaattcaATCTCGATAACGCGAAATCATCAAACACAGAC
GGCGAAAATGTACAGCATTCCGGCGGTAGCAGTAATCCTTACGTACATGC
AGACGAAAAAGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCAGTG
GAGAGACGTTTACCAAAGACTCAGATCCaaactttttcattaaaaAGCAA
GACTTGAAAGAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCCACC
ACCTCCTAACATGAGGCTATTTGaaaaacaaaagcAGGTTACTGGCAGAA
AGCGAGATGAATCAAATGGTATTCTAACATCGGATCCATTTCTCGAGGCC
GTTCACTTTTGGCCGTTCGAAACAAACAAAGGAATATTGACAAGCGATTT
GATCACTGGTTCAGATGCTATCTTAATGGGTGGAgctaaaatcactaaaa
aagGAGCACCAAATTCACCGCAAGGGCAACAAAATTACTACAATACACAA
GGAGCCAGTCACATGCCATCGCAACAACAACAAATGCCACCGCACCGAAA
GAGAAGTAGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGGATG
TAGAAGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTACGTT
ATCGCTGGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTGTAA
GTTGAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAAAAGAAT
TGGAGAGTACACAAAATGCTATAGGACGAGATGCTTACATATTGAGCACT
GGTGGCCAATCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCATGG
TAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaattaGAAA
TGCCgaaagataaaataaaacacGATGAATGGGTCCagctttcttttgtt
tggaataCAGACACATTAACTGGTTATCAAGATGGGACCAAAATAGGTAG
CACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTATGA
CTATCGGACGTCCGAATAATGCAGTCGACGCACGCTTCATGATGAAAATG
GAAATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGTAAAAGAACT
CGATAAATCATATGAAAATATAAAACAAAAGATCGATAAGACGAGGAGAC
GTagtattttagaaaaacattctACCATACAACAGCACGCATTGGTGAAC
AGGGAAATGCAAAACTAAGGTAATAGCAACTCAATAACATCTTTCCAACG
TGACCGAACACCTCTtaaaccatcaaagaattcgGAAGAAAAATCCgcgc
atgaaaatttcaatcaattcaATCTCGATAACGCGAAATCATCAAACACA
GACGGCGAAAATGTACAGCATTCCGGCGGTAGCAGTAATCCTTACGTACA
TGCAGACGAAAAAGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGACCA
GTGGAGAGACGTTTACCAAAGACTCAGATCCaaactttttcattaaaaAG
CAAGACTTGAAAGAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAACCC
ACCACCTCCTAACATGAGGCTATTTGaaaaacaaaagcAGGTTACTGGCA
GAAAGCGAGATGAATCAAATGGTATTCTAACATCGGATCCATTTCTCGAG
GCCGTTCACTTTTGGCCGTTCGAAACAAACAAAGGAATATTGACAAGCGA
TTTGATCACTGGTTCAGATGCTATCTTAATGGGTGGAgctaaaatcacta
aaaaagGAGCACCAAATTCACCGCAAGGGCAACAAAATTACTACAATACA
CAAGGAGCCAGTCACATGCCATCGCAACAACAACAAATGCCACCGCACCG
AAAGAGAAGTAGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGGAGG
ATGTAGAAGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGTTAC
GTTATCGCTGGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTTGTG
TAAGTTGAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAAAAG
AATTGGAGAGTACACAAAATGCTATAGGACGAGATGCTTACATATTGAGC
ACTGGTGGCCAATCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTTTCA
TGGTAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaattaG
AAATGCCgaaagataaaataaaacacGATGAATGGGTCCagctttctttt
gtttggaataCAGACACATTAACTGGTTATCAAGATGGGACCAAAATAGG
TAGCACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTATTA
TGACTATCGGACGTCCGAATAATGCAGTCGACGCACGCTTCATGATGAAA
ATGGAAATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGTAAAAGA
ACTCGATAAATCATATGAAAATATAAAACAAAAGATCGATAAGACGAGGA
GACGTagtattttagaaaaacattctACCATACAACAGCACGCATTGGTG
AACAGGGAAATGCAAAACTAAGGTAATAGCAACTCAATAACATCTTTCCA
ACGTGACCGAACACCTCTtaaaccatcaaagaattcgGAAGAAAAATCCg
cgcatgaaaatttcaatcaattcaATCTCGATAACGCGAAATCATCAAAC
ACAGACGGCGAAAATGTACAGCATTCCGGCGGTAGCAGTAATCCTTACGT
ACATGCAGACGAAAAAGCGGATCTTGTTCAAAAGCCAAGCTTGCTGTCGA
CCAGTGGAGAGACGTTTACCAAAGACTCAGATCCaaactttttcattaaa
aAGCAAGACTTGAAAGAGGGGAGTGTAGCTAAAAGAGATTCTTCAAACAA
CCCACCACCTCCTAACATGAGGCTATTTGaaaaacaaaagcAGGTTACTG
GCAGAAAGCGAGATGAATCAAATGGTATTCTAACATCGGATCCATTTCTC
GAGGCCGTTCACTTTTGGCCGTTCGAAACAAACAAAGGAATATTGACAAG
CGATTTGATCACTGGTTCAGATGCTATCTTAATGGGTGGAgctaaaatca
ctaaaaaagGAGCACCAAATTCACCGCAAGGGCAACAAAATTACTACAAT
ACACAAGGAGCCAGTCACATGCCATCGCAACAACAACAAATGCCACCGCA
CCGAAAGAGAAGTAGTTCCAATCATCTCCAAGTGAGAAGAGAAGAAGAGG
AGGATGTAGAAGTTTTCGACTCGTTTTTGGACACCAAAATGAACGGTAGT
TACGTTATCGCTGGTGATTTTAATGGAACTTGTTTTAGTGATCCAGACTT
GTGTAAGTTGAACGGGATGACCATATACACTTGGTTGAAGATTGATGCAA
AAGAATTGGAGAGTACACAAAATGCTATAGGACGAGATGCTTACATATTG
AGCACTGGTGGCCAATCTAAGAAATCACGAGGTTTCGCTTTCCTATGGTT
TCATGGTAAATTTGTCATGGTTATCAGTACCGaaacaaaacaatggaaat
taGAAATGCCgaaagataaaataaaacacGATGAATGGGTCCagctttct
tttgtttggaataCAGACACATTAACTGGTTATCAAGATGGGACCAAAAT
AGGTAGCACCAAGGGCGTGGCCGCTGAACGTCCGGAAGTCCAGTTCACTA
TTATGACTATCGGACGTCCGAATAATGCAGTCGACGCACGCTTCATGATG
AAAATGGAAATGGCTTATTTGACGTTATGGGATAAAGCATTGGAAGTAAA
AGAACTCGATAAATCATATGAAAATATAAAACAAAAGATCGATAAGACGA
GGAGACGTagtattttagaaaaacattctACCATACAACAGCACGCATTG
GTGAACAGGGAAATGCAAAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003329XLOC_003329Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005835-exon-sc0000061-1491911889:151191..151471TCONS_00005835-exon-sc0000061-1491911889:151191..151471Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:151191..151471TCONS_00005835-exon-sc0000061-1510915933:151191..151471Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:151191..151471TCONS_00005835-exon-sc0000061-1575043694:151191..151471Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:151765..151842TCONS_00005835-exon-sc0000061-1491911889:151765..151842Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:151765..151842TCONS_00005835-exon-sc0000061-1510915933:151765..151842Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:151765..151842TCONS_00005835-exon-sc0000061-1575043694:151765..151842Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:152340..152393TCONS_00005835-exon-sc0000061-1491911889:152340..152393Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:152340..152393TCONS_00005835-exon-sc0000061-1510915933:152340..152393Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:152340..152393TCONS_00005835-exon-sc0000061-1575043694:152340..152393Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:152795..152920TCONS_00005835-exon-sc0000061-1491911889:152795..152920Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:152795..152920TCONS_00005835-exon-sc0000061-1510915933:152795..152920Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:152795..152920TCONS_00005835-exon-sc0000061-1575043694:152795..152920Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:153731..153946TCONS_00005835-exon-sc0000061-1491911889:153731..153946Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:153731..153946TCONS_00005835-exon-sc0000061-1510915933:153731..153946Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:153731..153946TCONS_00005835-exon-sc0000061-1575043694:153731..153946Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:154202..154357TCONS_00005835-exon-sc0000061-1491911889:154202..154357Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:154202..154357TCONS_00005835-exon-sc0000061-1510915933:154202..154357Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:154202..154357TCONS_00005835-exon-sc0000061-1575043694:154202..154357Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:154847..155191TCONS_00005835-exon-sc0000061-1491911889:154847..155191Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:154847..155191TCONS_00005835-exon-sc0000061-1510915933:154847..155191Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:154847..155191TCONS_00005835-exon-sc0000061-1575043694:154847..155191Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1491911889:155911..156461TCONS_00005835-exon-sc0000061-1491911889:155911..156461Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1510915933:155911..156461TCONS_00005835-exon-sc0000061-1510915933:155911..156461Clytia hemisphaericaexon
TCONS_00005835-exon-sc0000061-1575043694:155911..156461TCONS_00005835-exon-sc0000061-1575043694:155911..156461Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005835-proteinTCONS_00005835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:151191..156461 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0687668	0.00407435	0	0.187007	0.369419	5.11421	7.54018	2.7155	2.05454	2.52479	1.96124	5.80166	5.11553	1.68126	6.22184	3.21268	3.22107	0	0	1.78969	2.16728	1.75179	1.47762	8.32715	12.4354	0.426079	0.181481	0.0246418	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005835 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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