|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005827 ID=TCONS_00005827|Name=TCONS_00005827|organism=Clytia hemisphaerica|type=transcript|length=741bp
GCTCTTTGATTTTGGAgttctttaacttttttatcaaCTTCTTTCATCAC
TGTTAATAACAtatctttgttttgcttgctCATTTCATCTTGTACAGTTT
TCTTTAAGTCTTCAACCAAGTCTGTCATATGATCTTTTCCATCCTTAATA
TCAACAACGACTTTGTCATGCAGCAAACTATCAAAATCTGGCAAACAGTT
GTAATTGATTCCAACCAAAGCTGCTCTTATTTCTGCCCAAATTCCTTTAA
AGAAGTTCTgatctttaaattcttttaAAGCACCATGAAGAATTTTATTT
CGAAGTTGTCGTAAAGCAATGATAAATGCTGCAACGGAAAAATCGCCTTG
TTTCGGTTCTTTGATTCTCCAACCACCTTTGGGCGGTgtaatattcacaa
aattgatgatgacaAAGACGATCAAGGTAATGTCAAATGAGAGCGAAGAG
GTTTTTCCGTTGGCTGGAAGCAAAAGGTCAAATTGATCTTTCTTCAAAGC
TCCACTTTTTTTCAGTCCGTTCAATTTCTTTCTATATTTATCGAAGAATT
GATATAACTGCTGCTCGTTGCGGGGAAGACCCTGATATAAAGGGTCGTTC
GTGTCGTTGTGCATGACACGGAGAAGTCCATTCTTGCCGTGAATGTTGAG
AGCCAAAATGCACTTTGCCCATTCTTTGTTGTTGGTTATTGTTTTGGAAA
AATCGCTACCCATCTTTATGATACAATGAATGAAAACATAA Run BLAST on NCBI transcript from alignment at sc0000061:19272..20124+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005827 ID=TCONS_00005827|Name=TCONS_00005827|organism=Clytia hemisphaerica|type=transcript|length=853bp|location=Sequence derived from alignment at sc0000061:19272..20124+ (Clytia hemisphaerica)
GCTCTTTGATTTTGGAgttctttaacttttttatcaaCTTCTTTCATCAC
TGTTAATAACAtatctttgttttgcttgctCATTTCATCTTGTACAGTTT
TCTTTAAGTCTTCAACCAAGTCTGTCATATGATCTTTTCCATCCTTAATA
TCAACAACGACTTTGTCATGCAGCAAACTATCAAAATCTGGCAAACAGTT
GTAATTGATTCCAACCAAAGCTGCTCTTATTTCTGCCCAAATTCCTTTAA
AGAAGTTCTgatctttaaattcttttaAAGCACCATGAAGAATTTTATTT
CGAAGTTGTCGTAAAGCAATGATAAATGCTGCAACGGAAAAATCGCCTTG
TTTCGGTTCTTTGATTCTCCAACCACCTTTGGGCGGTgtaatattcacaa
aattgatgatgacaAAGACGATCAAGGTAATGTCAAATGAGAGCGAAGAG
GTTTTTCCATTGGCTGGAAGCAAAAGGTCAAATTGATCTTTCTTCAAAGC
TCCACTTTTTTTCAGTCcgttcaatttttttctatatttatCGAAGAATT
GGNAGTGAAGAGGTTTTTCCGTTGGCTGGAAGCAAAAGGTCAAATTGATC
TTTCTTCAAAGCTCCACTTTTTTTCAGTCCGTTCAATTTCTTTCTATATT
TATCGAAGAATTGATATAACTGCTGCTCGTTGCGGGGAAGACCCTGATAT
AAAGGGTCGTTCGTGTCGTTGTGCATGACACGGAGAAGTCCATTCTTGCC
GTGAATGTTGAGAGCCAAAATGCACTTTGCCCATTCTTTGTTGTTGGTTA
TTGTTTTGGAAAAATCGCTACCCATCTTTATGATACAATGAATGAAAACA
TAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005827-exon-sc0000061-1491911889:19272..19721 | TCONS_00005827-exon-sc0000061-1491911889:19272..19721 | Clytia hemisphaerica | exon |
| TCONS_00005827-exon-sc0000061-1510915933:19272..19721 | TCONS_00005827-exon-sc0000061-1510915933:19272..19721 | Clytia hemisphaerica | exon |
| TCONS_00005827-exon-sc0000061-1575043694:19272..19721 | TCONS_00005827-exon-sc0000061-1575043694:19272..19721 | Clytia hemisphaerica | exon |
| TCONS_00005827-exon-sc0000061-1491911889:19834..20124 | TCONS_00005827-exon-sc0000061-1491911889:19834..20124 | Clytia hemisphaerica | exon |
| TCONS_00005827-exon-sc0000061-1510915933:19834..20124 | TCONS_00005827-exon-sc0000061-1510915933:19834..20124 | Clytia hemisphaerica | exon |
| TCONS_00005827-exon-sc0000061-1575043694:19834..20124 | TCONS_00005827-exon-sc0000061-1575043694:19834..20124 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000061 | supercontig | sc0000061:19272..20124 + |
Blast
The following BLAST results are available for this feature:
|
