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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005825 ID=TCONS_00005825|Name=TCONS_00005825|organism=Clytia hemisphaerica|type=transcript|length=937bp
NTCAAACTTAGaatattttacagaaaaagcTTCCCTAGAGATACCATCAT
TGACTGATGACCCTCTTGGGCTGCTGAGATCAAGGATAACTCTGATCGAA
CCATCAGGCTTCGGCACACCACCCAAAGGAGaaagatggaaatttttaaa
aggagGTATAGTGAAGGGACCTCTTGTGTGTCCCCTGTTCATCTTTTTGA
GAATGGCTGTAGAAATGTCCTCAGAAACATCATTGGACGAAGAAAGTGGT
CTTTTCCTTCCTGGTgtcatttttgtaataaaaCCAACACGAAAACCATC
TGTGAAACCAGACTTAAGAAAATCAACAATGTAGGGGTCAGGATGACcct
caagaaaaacaaaaaacaatcgtAAATTAATCCTGCAAATAGCAGAAGGA
GGTAAGGCAAACAATCCTGCTACACTATCCAGAGGGCCTGGATGCTCTGC
AGCTGTGTGCTGGGTGACCTGGCCTTCCACAGTAGGAGCATTTATGGGCA
TAACGACACGTGGCGCCTCTCTTGCAGAAGCTAGAGTTAAAATAGGGGCA
TGCCTCAGTCGATGCATCATGGGCACTTCCTTGAAAGGGATTTTGTGCAT
TAACACCAGAAATGGGAGGTCTAGGTGGTCGAGACTGCGTGAAAGTACTA
GTAGTTTGGTCCTGTGAGGACAAAGGGTTCGGACACCTAGTTGCATAATG
ACCTTTTTTCTTACATTTGTAGCAAGTCACATCAGGAAACGAACCAGCTT
GGCTGGAGGAAAAGCTACCAACCTGAGGCCTCAAAGTCGAAGAAAAAATG
TCCAGATCGATTCTGTCCCAGAAGGTTTCGGTTAGGTTTACAGCCAACTT
CCTTCTGAATTGGACGTCATAATCAGCCACACATTGAAAGGGATACGtcg
tgaaaaatctgcaaatccTTTCCTGGTATCTAATCAG Run BLAST on NCBI protein sequence of TCONS_00005825-protein >TCONS_00005825-protein ID=TCONS_00005825-protein|Name=TCONS_00005825-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MQLGVRTLCPHRTKLLVLSRSLDHLDLPFLVLMHKIPFKEVPMMHRLRHA
PILTLASAREAPRVVMPINAPTVEGQVTQHTAAEHPGPLDSVAGLFALPP
SAICRINLRLFFVFLEGHPDPYIVDFLKSGFTDGFRVGFITKMTPGRKRP
LSSSNDVSEDISTAILKKMNRGHTRGPFTIPPFKNFHLSPLGGVPKPDGS
IRVILDLSSPRGSSVNDGISREAFSVKYSKFX Run BLAST on NCBI transcript from alignment at sc0000059:782304..783240 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005825 ID=TCONS_00005825|Name=TCONS_00005825|organism=Clytia hemisphaerica|type=transcript|length=937bp|location=Sequence derived from alignment at sc0000059:782304..783240 (Clytia hemisphaerica)
CTGATTAGATACCAGGAAAggatttgcagatttttcacgaCGTATCCCTT
TCAATGTGTGGCTGATTATGACGTCCAATTCAGAAGGAAGTTGGCTGTAA
ACCTAACCGAAACCTTCTGGGACAGAATCGATCTGGACATTTTTTCTTCG
ACTTTGAGGCCTCAGGTTGGTAGCTTTTCCTCCAGCCAAGCTGGTTCGTT
TCCTGATGTGACTTGCTACAAATGTAAGAAAAAAGGTCATTATGCAACTA
GGTGTCCGAACCCTTTGTCCTCACAGGACCAAACTACTAGTACTTTCACG
CAGTCTCGACCACCTAGACCTCCCATTTCTGGTGTTAATGCACAAAATCC
CTTTCAAGGAAGTGCCCATGATGCATCGACTGAGGCATGCCCCTATTTTA
ACTCTAGCTTCTGCAAGAGAGGCGCCACGTGTCGTTATGCCCATAAATGC
TCCTACTGTGGAAGGCCAGGTCACCCAGCACACAGCTGCAGAGCATCCAG
GCCCTCTGGATAGTGTAGCAGGATTGTTTGCCTTACCTCCTTCTGCTATT
TGCAGGATTAATTTacgattgttttttgtttttcttgaggGTCATCCTGA
CCCCTACATTGTTGATTTTCTTAAGTCTGGTTTCACAGATGGTTTTCGTG
TTGGttttattacaaaaatgacACCAGGAAGGAAAAGACCACTTTCTTCG
TCCAATGATGTTTCTGAGGACATTTCTACAGCCATTCTCAAAAAGATGAA
CAGGGGACACACAAGAGGTCCCTTCACTATACctccttttaaaaatttcc
atctttCTCCTTTGGGTGGTGTGCCGAAGCCTGATGGTTCGATCAGAGTT
ATCCTTGATCTCAGCAGCCCAAGAGGGTCATCAGTCAATGATGGTATCTC
TAGGGAAgctttttctgtaaaatattCTAAGTTTGAN Coding sequence (CDS) from alignment at sc0000059:782304..783240 >TCONS_00005825 ID=TCONS_00005825|Name=TCONS_00005825|organism=Clytia hemisphaerica|type=CDS|length=696bp|location=Sequence derived from alignment at sc0000059:782304..783240 (Clytia hemisphaerica)
ATGCAACTAGGTGTCCGAACCCTTTGTCCTCACAGGACCAAACTACTAGT
ACTTTCACGCAGTCTCGACCACCTAGACCTCCCATTTCTGGTGTTAATGC
ACAAAATCCCTTTCAAGGAAGTGCCCATGATGCATCGACTGAGGCATGCC
CCTATTTTAACTCTAGCTTCTGCAAGAGAGGCGCCACGTGTCGTTATGCC
CATAAATGCTCCTACTGTGGAAGGCCAGGTCACCCAGCACACAGCTGCAG
AGCATCCAGGCCCTCTGGATAGTGTAGCAGGATTGTTTGCCTTACCTCCT
TCTGCTATTTGCAGGATTAATTTacgattgttttttgtttttcttgaggG
TCATCCTGACCCCTACATTGTTGATTTTCTTAAGTCTGGTTTCACAGATG
GTTTTCGTGTTGGttttattacaaaaatgacACCAGGAAGGAAAAGACCA
CTTTCTTCGTCCAATGATGTTTCTGAGGACATTTCTACAGCCATTCTCAA
AAAGATGAACAGGGGACACACAAGAGGTCCCTTCACTATACctcctttta
aaaatttccatctttCTCCTTTGGGTGGTGTGCCGAAGCCTGATGGTTCG
ATCAGAGTTATCCTTGATCTCAGCAGCCCAAGAGGGTCATCAGTCAATGA
TGGTATCTCTAGGGAAgctttttctgtaaaatattCTAAGTTTGAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005825-exon-sc0000059-1491911889:782304..783240 | TCONS_00005825-exon-sc0000059-1491911889:782304..783240 | Clytia hemisphaerica | exon |
| TCONS_00005825-exon-sc0000059-1510915933:782304..783240 | TCONS_00005825-exon-sc0000059-1510915933:782304..783240 | Clytia hemisphaerica | exon |
| TCONS_00005825-exon-sc0000059-1575043694:782304..783240 | TCONS_00005825-exon-sc0000059-1575043694:782304..783240 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:782304..783240 . |
Blast
The following BLAST results are available for this feature:
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