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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005782 ID=TCONS_00005782|Name=TCONS_00005782|organism=Clytia hemisphaerica|type=transcript|length=711bp
gttaagttgaataaaattaattttttttgtgttgcaaacataatttttat
gggtagcAGTAAGGTTGATTAAATGACAACCTATATCTTAGTTTTACATG
GCaaatcttcaaactttcttagcattttgattgaagatgggcagatgggc
aaaatcgactaaaaatgttgtttttttttcctacagtttagatgaaaaaa
taatgttatcCTAGCAAAACTTGCTTGATGGCAATGGACAATTGATTTTA
GATTTGgtcAGCAGGTTAGTTACCATCATACTGCCCAGTAACCTAGATCC
ATGAATTATTTTGTATATCTTCACGTGGTTGGTATACAATGAtaattggc
ttaaaatttttctgaatttgtcAAGTACAAGGTTCAATATCTTTgcaaac
aacaacaaattctGCTAATAAGATGGACGGGTGAAAAGCATATTTAACTC
AAAGGAAACAACAATGGAATCTGATGTCATGGTTTGTTTGCAGTTGGATT
GAGATCTTTTTATCCCTGTTTCACCAGGATTTCTTGCTCGATTACGCAAA
TAGTCCCAAACAAGACACCAGAATGAGGCTGGACTACAATTACTAGATAT
GAACCAACCATATCAAAAATGCTTTAATAGAAATTCCAGTTTGGACACTA
GACTATTTTCATGCATCacattatataattattcatcttatgaaatactc
ttttcttgagc Run BLAST on NCBI transcript from alignment at sc0000059:657854..659182- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005782 ID=TCONS_00005782|Name=TCONS_00005782|organism=Clytia hemisphaerica|type=transcript|length=1329bp|location=Sequence derived from alignment at sc0000059:657854..659182- (Clytia hemisphaerica)
GTTAAGTTGAATAAAATTAATTTTTTTTGTGTTGCAAACATAATTTTTAT
GGGTAGCAGTAAGGTTGATTAAATGACAACCTATATCTTAGTTTTACATG
GCAAATCTTCAAACTTTCTTAGCATTTTGATTGAAGATGGGCAGATGGGC
AAAATCGACTAAAAATGTTGTTTTTTTTTCCTACAGTTTAGATGAAAAAA
TAATGTTATCCTAGCAAAACTTGCTTGATGGCAATGGACAATTGATTTTA
GATTTGGTAAGTATGCTAAGTTATTATTACATTTTTTTGGGGTTGAAATT
TCAAGTTTTTGTATGTAACAGAAAATTGCAATCAAAGTTCTAATATTTTT
ACTTATGTAGGTAATTTATAAAACTATAACTATGACTCTGACCGGTTTGG
CTCTGACCGGTTAGTAGATTGGCTCTGACCGGTTAGTAGATTGGCTCTGA
CCGGTTTATAGTAGATTGGCTCTGACCGGTTAATAGATTTGCTCTGACCG
ATTAATAGATTGGCTCTGACCGGTTAGTAGATTTGCTCTGACCGGTTAGT
AGATTGGCTCTGACCGGTTAATAGATTGGCTCTGACCGGTTANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCATTATTATATACTTTCAGGTCAGCAGGTTAGTTACCATCATACT
GCCCAGTAACCTAGATCCATGAATTATTTTGTATATCTTCACGTGGTTGG
TATACAATGATAATTGGCTTAAAATTTTTCTGAATTTGTCAAGTACAAGG
TTCAATATCTTTGCAAACAACAACAAATTCTGCTAATAAGATGGACGGGT
GAAAAGCATATTTAACTCAAAGGAAACAACAATGGAATCTGATGTCATGG
TTTGTTTGCAGTTGGATTGAGATCTTTTTATCCCTGTTTCACCAGGATTT
CTTGCTCGATTACGCAAATAGTCCCAAACAAGACACCAGAATGAGGCTGG
ACTACAATTACTAGATATGAACCAACCATATCAAAAATGCTTTAATAGAA
ATTCCAGTTTGGACACTAGACTATTTTCATGCATCACATTATATAATTAT
TCATCTTATGAAATACTCTTTTCTTGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005782-exon-sc0000059-1575043694:658927..659182 | TCONS_00005782-exon-sc0000059-1575043694:658927..659182 | Clytia hemisphaerica | exon |
| TCONS_00005782-exon-sc0000059-1575043694:657854..658308 | TCONS_00005782-exon-sc0000059-1575043694:657854..658308 | Clytia hemisphaerica | exon |
| TCONS_00005782-exon-sc0000059-1510915933:658927..659182 | TCONS_00005782-exon-sc0000059-1510915933:658927..659182 | Clytia hemisphaerica | exon |
| TCONS_00005782-exon-sc0000059-1510915933:657854..658308 | TCONS_00005782-exon-sc0000059-1510915933:657854..658308 | Clytia hemisphaerica | exon |
| TCONS_00005782-exon-sc0000059-1491911889:658927..659182 | TCONS_00005782-exon-sc0000059-1491911889:658927..659182 | Clytia hemisphaerica | exon |
| TCONS_00005782-exon-sc0000059-1491911889:657854..658308 | TCONS_00005782-exon-sc0000059-1491911889:657854..658308 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:657854..659182 - |
Blast
The following BLAST results are available for this feature:
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