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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005781 ID=TCONS_00005781|Name=TCONS_00005781|organism=Clytia hemisphaerica|type=transcript|length=518bp
gtttagatgaaaaaataatgttatcCTAGCAAAACTTGCTTGATGGCAAT
GGACAATTGATTTTAGATTTGGTTAGTTACCATCATACTGCCCAGTAACC
TAGATCCATGAATTATTTTGTATATCTTCACGTGGTTGGTATACAATGAt
aattggcttaaaatttttctgaatttgtcAAGTACAAGGTTCAATATCTT
TgcaaacaacaacaaattctGCTAATAAGATGGACGGGTGAAAAGCATAT
TTAACTCAAAGGAAACAACAATGGAATCTGATGTCATGGTTTGTTTGCAG
TTGGATTGAGATCTTTTTATCCCTGTTTCACCAGGATTTCTTGCTCGATT
ACGCAAATAGTCCCAAACAAGACACCAGAATGAGGCTGGACTACAATTAC
TAGATATGAACCAACCATATCAAAAATGCTTTAATAGAAATTCCAGTTTG
GACACTAGACTATTTTCATGCATCacattatataattattcatcttatga
aatactcttttcttgagc Run BLAST on NCBI transcript from alignment at sc0000059:657854..658997- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005781 ID=TCONS_00005781|Name=TCONS_00005781|organism=Clytia hemisphaerica|type=transcript|length=1144bp|location=Sequence derived from alignment at sc0000059:657854..658997- (Clytia hemisphaerica)
GTTTAGATGAAAAAATAATGTTATCCTAGCAAAACTTGCTTGATGGCAAT
GGACAATTGATTTTAGATTTGGTAAGTATGCTAAGTTATTATTACATTTT
TTTGGGGTTGAAATTTCAAGTTTTTGTATGTAACAGAAAATTGCAATCAA
AGTTCTAATATTTTTACTTATGTAGGTAATTTATAAAACTATAACTATGA
CTCTGACCGGTTTGGCTCTGACCGGTTAGTAGATTGGCTCTGACCGGTTA
GTAGATTGGCTCTGACCGGTTTATAGTAGATTGGCTCTGACCGGTTAATA
GATTTGCTCTGACCGATTAATAGATTGGCTCTGACCGGTTAGTAGATTTG
CTCTGACCGGTTAGTAGATTGGCTCTGACCGGTTAATAGATTGGCTCTGA
CCGGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCATTATTATATACTTTCAGGTCAGCAGGTT
AGTTACCATCATACTGCCCAGTAACCTAGATCCATGAATTATTTTGTATA
TCTTCACGTGGTTGGTATACAATGATAATTGGCTTAAAATTTTTCTGAAT
TTGTCAAGTACAAGGTTCAATATCTTTGCAAACAACAACAAATTCTGCTA
ATAAGATGGACGGGTGAAAAGCATATTTAACTCAAAGGAAACAACAATGG
AATCTGATGTCATGGTTTGTTTGCAGTTGGATTGAGATCTTTTTATCCCT
GTTTCACCAGGATTTCTTGCTCGATTACGCAAATAGTCCCAAACAAGACA
CCAGAATGAGGCTGGACTACAATTACTAGATATGAACCAACCATATCAAA
AATGCTTTAATAGAAATTCCAGTTTGGACACTAGACTATTTTCATGCATC
ACATTATATAATTATTCATCTTATGAAATACTCTTTTCTTGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005781-exon-sc0000059-1575043694:658927..658997 | TCONS_00005781-exon-sc0000059-1575043694:658927..658997 | Clytia hemisphaerica | exon |
| TCONS_00005781-exon-sc0000059-1575043694:657854..658300 | TCONS_00005781-exon-sc0000059-1575043694:657854..658300 | Clytia hemisphaerica | exon |
| TCONS_00005781-exon-sc0000059-1510915933:658927..658997 | TCONS_00005781-exon-sc0000059-1510915933:658927..658997 | Clytia hemisphaerica | exon |
| TCONS_00005781-exon-sc0000059-1510915933:657854..658300 | TCONS_00005781-exon-sc0000059-1510915933:657854..658300 | Clytia hemisphaerica | exon |
| TCONS_00005781-exon-sc0000059-1491911889:658927..658997 | TCONS_00005781-exon-sc0000059-1491911889:658927..658997 | Clytia hemisphaerica | exon |
| TCONS_00005781-exon-sc0000059-1491911889:657854..658300 | TCONS_00005781-exon-sc0000059-1491911889:657854..658300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:657854..658997 - |
Blast
The following BLAST results are available for this feature:
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