TCONS_00005761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005761
Unique NameTCONS_00005761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3678

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005761 ID=TCONS_00005761|Name=TCONS_00005761|organism=Clytia hemisphaerica|type=transcript|length=3678bp
GACTGCTGCACAGGCAAATCTCCCCCTTCAAACCTCTGATTTATTGCTGA
AAAAACATGTTCTTGGTCAATGACATAGAATATATACTGACtggttcatc
atttttttatttttcatagaaaagaaataaagcaCGAAAATGCTAAAATT
ATATGTTGTTGTATGGtagcatttttttcaaattgaatttattttttgca
aTTGGGAGATTTATTTATAATATACACAATGGCTGATAGATTATTTATGT
ACAGttgGTATCATGGGGAAATTTCAAGGCCAACATCAGAAGAGATCTTA
CTGAATCAAAGCCCTGGTCTTTTTCTGGTTCGAGATAGTACTTCGTGCAA
AGGGGGATATGTTTTATCTGTCAgTGAAAACCGTAAAGTCAGCCACTACA
TTATCACGAATCGGCAAGGGCAGTATCACATTGGAGATCAAGTATTCAAT
GACTTGCCTGATATCGTAGAATTTTATAAACGGCATTTTTTGGATACAAC
TACTCTAGTTGAGCCAgcAGCACGACAAGTTGAGCCGGAACCTGAAGCTC
CAGCAGCACGTGCTCCACCACAAGAATCGATAAAAGTGAAAGCGAAATAT
AATTTTCCTGGAAATGATCCAGAGGATTTACCATTCCGCAAGAATGACAA
TTTAACGATATTGAAGAAAGAGGAGGATCAATGGTGGTTAGCAAGAGATA
GTCAAGGAAAAGAAGGAATGATTCCTGCTAATTATGTCGAAGTGGTACGG
ACGACATCCACAGTCAACACCATGTCAAATTCATCCACCTCAACCCGTGT
ACCAAGCATCACAACAGGATCTGGTGGTTACACGACACCCAACAATACTT
CAGTACCTTCAACTGTTCCAACAGCAACGACGGTACCAGCGATCGCAGAA
GCGATTCAAGATCGTGTCCCTAGTATCTACGACCCTTACGAACTTAAATT
TCAGAAAGGAGAGAGAATTTTAGTGCTTAAGATGCGTGAGGATGGCATTT
GGGAAGGACAattaaaaaatggtaaaaaaggaattttcccGTTCCGCTAC
GTCAAAATAGTTTCCAGTTCACCACAAGACGTAGATGCGTGGAACAACTC
GtaataactcgggataactcctTAGATGTATTTCTCTTAATACAATTCAT
AGGTATTAAATTAATATGGTTCTACTCTCGAGTTTCGGGGAATGTTCAAC
TCGTACGTGAGCTGAGAGTGAGTTTGGGTGTTGAGTTTAAAGGTTGTACT
TTTAATAGAGGTCTTATGAAATGAAACAACTCCCtggaaaaacatagaaa
ataacacgcgaaaaattttaatgaattttaatATAGATCAAAAtaagatt
taaaatattttgtctttcaTAGTGTAGTTAGGTTTACACAAACAAAGTTA
TATGCTATGAAAATTTACTTCAAAGTCTTCTTTATGACTAAATGTAAGTA
CTAAAATAACGCACAACTCTCTATCACACCTTTGCCCATCTGGTACGCag
tgttgtttcaacgttcataaaACGTTTTATTGACGTTACgggacgttaga
taaacgttgaaacgacggtCGCATGCTAGCCTCAGCTCAACAAGAACTCC
CTGAAAATCTTACATTTTGATGGTTTGCCTACTAAAAGAAACTCAGAATT
ATGAGCTTTCCAAATTGGAGTGAAATAGGATATTTGTTTACTAAAACATG
GTTTGACCTGAGAATGTATTGGAATTGCTGGTGGTGCTGTTAAATAAAGT
CTAATGTAATTGGAAGAAAAACAAACCCCACCGCTAGATTTGATGAAATC
CTTCGTTGGgaattttattcaatgattGTTGTAATGCTATTTGGTGATTT
TCTTGGATACGGATTTGTTCAGTTGTGGACAAGATGGTTATGCACCTCCC
AATTGAATGGTGATTATGATATGTATCAATGGAAGACCTTTACTTGAAAA
CTACACTTTTTTTGTACGCATGTTTTGGCGGCTGGATCATgatttaatga
tattttgataGTTATGTGCTATATCCCCATTAACTTCTTATTCTGACCCC
AATTCTATCCTTAAACTAGATTTTGAAGTGTTACTTCTCCAAATAGACAC
AAAAAATCACACACCATAAGAAGAAACTTGactcgttttttataagaatc
agtaacTCTTTTTTTGAGACTCAGCTGTTCCTATATTTTTCGGCACCTTG
AATTCATAATGATTCCTTCTACCCTGATTCTATTTTAGGGCAAGACTAAT
GAATTTTAGGTTTAACATACTATTCTTTATAATTTGACTCTTAATAAGCT
TAAATTCAAACAGTCCAGGCTTGCCATTGTTCTTAAAACGTTctaatttt
ggcatttttgagcctcattgttctaaAAAGGAGTGATAATTTTTGTAAGG
AGTTTGGGAATTTCTATGATGCAAGGTTTAAATTCGTATAATTGAAGGGT
GTGTGTATCTTTTCCTGCAACAAAACAACTCGTCTGATTTTGCCATAATT
TAcatcaatattttttatctttttttctgtTATAATAATGTAATCTCGAA
TGAATTCAAAGCGCAAGTACGGTGGCCCtgaaatgtcttcattttctcaC
ATATGATAAAGACCAAATATTCGGTGATGAAACAGAGATATTTTAGGGCC
ATCGTGCGTCATAatgtaaattgttttttttgtactGAGGAATATGATTA
AAATTTTCtagttaatttttatttttggtgatttttttgtgtctCTGATT
CAATCGACTGTTTAAGATATTGACTATTAAATAGGTTCTTGAGATGACTA
AATAGGTTGATTTTTGTTGTGGGAATTATTTTTGTCAATACTTTACTCGG
ATAAGTTTAACTACATATTAGACTTTGCGTTTTCGccaatttttgtattt
tcgccaattttgttaaaatttctgGCTCACAAAATAAATCGCACGCCAAA
AATTCTCTTGTCACGGTATCTCTCTATTTATACTGTTTTtctgttttaat
ttttgctaTGTTATAGATTTTATTATACCTTTTTGTAATGTATATTTTTC
AcgatattattttttgtttgattatgTTATTGTGTAGCACgtttctaaaa
atcttttttttttcgaacaaaaatattttcaatagcACGCAAAAATATTA
TATTAGAGAAGTCCCCCCATATGTTCTGTTTCTAACTCAATTCGAATGGT
TTTGAGCACCAAGCCAAGTCATATATGTTATCTGCCATATCGACTTTTAT
CTTCTCTTGAGCCAGTATGAGACATGTTTTCAGCTGTTTTTcttaataaa
atgaaataattttgaattctcttatttttataaattattgGTCAAATTTT
CTCTTCGTAGCTGAGTGGGTTGAACCTTTTTAGTCATGCTCATGCCCCTT
GTCTCCATTTATGAATAAAAACAATACAATAGAATATTTTAAACTAAATT
GTCATTACAGTATGTGTAACTTTtgtagaataatttttttagtATCAATC
CAATTTTTGGTATACTTTCCCCCATTTTAAGCCAAGTCTTGTATAAATAC
GAAAAAAGTATATTATTATTTTCTGTTTCTGTATTATTTGATTGACTCAG
ATGagatgaagtttttataagattatACTtaaataattggtcatttgaag
ttataaaatgacgcgttcttcagaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000059:282924..291295-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005761 ID=TCONS_00005761|Name=TCONS_00005761|organism=Clytia hemisphaerica|type=transcript|length=8372bp|location=Sequence derived from alignment at sc0000059:282924..291295- (Clytia hemisphaerica)
GACTGCTGCACAGGCAAATCTCCCCCTTCAAACCTCTGATTTATTGCTGA
AAAAACATGTTCTTGGTCAATGACATAGAATATATACTGACTGGTTCATC
ATTTTTTTATTTTTCATAGAAAAGAAATAAAGCACGAAAATGCTAAAATT
ATATGTTGTTGTATGGTAGCATTTTTTTCAAATTGAATTTATTTTTTGCA
ATTGGGAGATTTATTTATAATATACACAATGGCTGATAGATTATTTATGT
ACAGGTAAGTTAACTTCTTTCAATTTACTTTGATTGACATTGATTATTGT
GGTAAATTATCATAATTTATCACAGTCTACACTTTAGCGCAATATTTTAT
TAACCAGGGTGCTAAGGCTCAAGGCCTTAAATTAGCCATTAAATCTTGTA
AAGTGAAAGTTTTTTGTATAATCTAATCATGACAAATCACAGCCCATGCC
CTAATATCAGGGGTGGACAAATTAAGAATCTTTCAGAAAATGAGCTAGAA
TGCTAAGCAACCCCAGGCCTGACCTGAAAAGTTGAGTTACTTATAAAAAA
ATGTGTAATAATTTGCTTTTGATTTTGCTGTTTGAAACAAGTATAGATCA
AACAAAGTGTTTTGATGCTAATATTTCTTTTTACATGATTTTATTTTTAG
TTGGTATCATGGGGAAATTTCAAGGCCAACATCAGAAGAGATCTTACTGA
ATCAAAGCCCTGGTCTTTTTCTGGTTCGAGATAGTACTTCGTGCAAAGGG
GGATATGTTTTATCTGTCAGGTAAAGTAAAAATATTTTGTATACAAGCCT
GGTTGGAAATAGTGTATTATAGTTTATGCATATACTAAGAAAATATGCAT
TTTAAAGACCAAATTTTGAGCGTATATGTAGTTTTGGCATAAAGATGCTT
TCCTTCTTGACCAGGCCCATTTTCATCTTTTGAAAGAAATGTGGCTAACA
CATTGTTCTGATTGATTTCATTTTTTTTCTAAGAAAACTTTAAACATTAC
TCCTAATTGGAAAAACGTTATCATTAAAAGTAACCCCTTGTTGAAAAGAT
AATTTTGAGGAGAATGATTCAAGTCTAAGAGAATGAAGATGGAAATCAAA
ATTAGAAAAAAAGAGATGATTTTTTCTAATGTGACTAAAAATTTTATCTT
ATATTTTTCTGAAACTTGACAATGACTGATTTCAAATATTAAATCAGATT
TTTTCTTTCACTCTTAAATCATAAGTTATTATAGCCCTCCCAAAAAGGTC
CAAATCATCCAGTTTTACTATAGCCATACATATTTTATTGCCCATCTGTT
AAAAAAAGACGTTTTAATACTTTTTTAGTGAAAACCGTAAAGTCAGCCAC
TACATTATCACGAATCGGCAAGGGCAGTATCACATTGGAGATCAAGTATT
CAATGACTTGCCTGATATCGTAGAATTTTATAAACGGCATTTTTTGGATA
CAACTACTCTAGTTGAGCCAGTAAGTATAAAAAATAACTTTTTAGCTTTA
ATTTTATTTTCGTTTAGGATTTTAGTACAATATAGTGGCTGGTTTAAGTG
TAGTGCTACAGCGATCAAAACAGGGGGGGGGTCAATATTTATGATACCAA
CCCATAGCCCAAAAACCTGACTTTTGACCTTTTGAGCTAAGTTAACACCA
CCACCCCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAAAAAGA
TACCACCACCCGGCTATGGGTCTGGTATCTGGATGTTGACCCCCCCCCCT
GATCAAAATTTGAAAATCAGGGGAGGGATTCTTTGACCTTTTTTTCTCAA
ATTCTTTCTCCATCCTTGGACTACATACAGAGGCTTTTCTGTCTCTATAA
TACCAAAGTTCCAAAAATATGTGTTAATTTGCAATGTAAATCCATTCACC
GTCTCAGAAGGAAAACTTTGCTTGCTTTGACCACTGTTGAAAGCTGGACC
TGGTATCTTCCATGTTTTATATTATATTGTTTTCATTTTTTTAGGCAGCA
CGACAAGTTGAGCCGGAACCTGAAGCTCCAGCAGCACGTGCTCCACCACA
AGAATCGATAAAAGTGAAAGCGAAATATAATTTTCCTGGAAATGTGAGTA
AAAGATGAAAAAAAGAGTGGTCTAACTCTGGTGAAATTATAAAGTAGAGC
ATTTTTATGAACCTGATGATGGTATAAAACCACTGATTAACTTTGAGAAT
TTTTGTTCATGAATTTTAAAATATATTTTTAATTGTTTGAATCATTGGTT
GTATATAGTGAGTGGAAATGTTTGGATTAGTAGGTGTAGTTATCCCCATG
GAAATTCCATAAGGTTTTGAAAAAAAGCTGTAAAAATTTCCTTTGGCAAT
TAAGAGGTTAAAAGAGGAGAAAAATAGATAAGTTTGAGAAGAAATTTCCC
CATAAGCAGGGCTTTATAAGAATGTCCTACCGATACCTTAAGCCATTTTT
CCTGCCCTTTTAGCGTCCGGTTAACGAACCCTGCCCCGCCTAAAATCATG
AAAGTTTTGGTAAAAACAGCCTTTTTAGTGGAAAAACACTAAAAGTGCCC
TTTTTGGCCAACGGACACTGCCCTGCCTTTCTAAAATAATTATGGCCTCT
ACCTTATTACACGAATATTACTAGACAAGTATTCAATGGCCTTGAAATTT
GAACGATCTGAAATCAACACAAATTTTTCTGATTTTTCAAGGAAACAATG
ACTGGTTTTGATCAAGGGGGTTTTTATTAACACGAAATATTTTAATTCGT
GTTCATAAAATGACTAGTAATATTCGTGTAATAAGGTTAGATTTAATATT
AAGTGAATAAATTTTGAAAAAATATCCCCATAAAGTTTTTATAATACAAG
ATTAATAAAAAAAATGGAGAGAAAAGATGTGAACTACCAGGAATTACCCG
AATGTAGACAAGAGGCTGCATTAAGAATGTTCTGAATGGAAATGAATGAA
TGATTTTTTATAATACAGGATCCAGAGGATTTACCATTCCGCAAGAATGA
CAATTTAACGATATTGAAGAAAGAGGAGGATCAATGGTGGTTAGCAAGAG
ATAGTCAAGGAAAAGAAGGAATGATTCCTGCTAATTATGTCGAAGTGGTA
TGGAAACAGCTTTCTTTAACTTTTTTTATTAAATTTTTAGATACTAAAGT
ATACATCCATGTGAAATCTGATTTCAATTTGTACTGTTGTTGTAGTGTTT
CAACTATTCTCTCTCTAAACAATTTACAAGTTGAAGGGTGTGCTAGGCCA
TTGATTTCAAAGCCACGAGGGGCTAGATCCAAAACTCCTGGATTGGAAAA
GAAGCTACTTATTTCCTATCCAAATGTTTGACCTGCATGTTTTCCAAACA
TAATTTCTAAATGTGGGACAAACTTAAAGCTTCGCTTTTCTTGCTTGAGA
AATGTTGAGGATTCCTCTCTCGCCCCTTCGGGGCTTCAAACTCAATATGT
TAACCAGACTAAGCCTTTATGATAGTATCTGTCCATTTTGACAAGACTCT
GGTCGAACAAATACTGATTCTCATTTTTGCAACACTTTTTAGGTACGGAC
GACATCCACAGTCAACACCATGTCAAATTCATCCACCTCAACCCGTGTAC
CAAGCATCACAACAGGATCTGGTGGTTACACGACACCCAACAATACTTCA
GTACCTTCAACTGTAAGTCTGCCTCATTGATCGCTAGCAACTTGACTGGA
TATGGCTTCCCATATAAAAGGAAGCCCGTCCAGTTTTAAAGCTGACTAGT
CCNACTAGCAACTAGACTGGATATGGCTTCCCATATAAAAGGAAGCCCGT
CCAGTTTTAAAGCTGACTAGTCCGTCATCTTGTTTTCAATTCTGATCGTC
AACAACACGATTGGAACGTTTTGAAATTCCAGCTCCCAGGATTTTTCAGG
TGGGGCTAAGGAGAAAATTCCCAGGCTAAATTCAAAAAACTTAGCCCCAC
CTTCACAAAGCAAAATATCAAAGAAATTTTGTTTGCAAATTCTCAAGAAA
TCTACTGTGCCGCAGGCAAAAATGTTTTTCAGTGAGGGTCAAAACCTTCC
CCACAGCAGAGATTTTAACATAATTTAAAATATTTGTTACCTATCAGCTC
TACTCCAGTTCTATTACCCAACGGCAATGAATTTTGAAATTAGCCGTAAA
TATCGGGTTTGTGTACAGACTAACCTGGACTAACCAGCATAATGCTCTGC
TCAAAAGAGATATGGTAAAGGTCCATTCATTCAAAGCTGAAGTGAAAATT
CCTGAAAGTTGTCTGAAAATGAAAGGAAAAGCGACTGGGTTTCTAAAATG
TATATTTTTGATTGATAGTAGATCTAGGCTCTTAGATCGTATAAAAACCT
GAGCATTTTATAATATTCTTGTAAAATTTGGATGAAAAAGTTTAAAGCGG
GCTGTCAAAGCCATCCTGGGTGCTAGATCCTCTTACGATGTATCGTAGAT
ACTCAGATCATTTTACAAAGCTTGCCTGTCGTTCTTACTCACTCTCAGAG
TTTTGACATGCCCTCACTTTTCGCACCATGTATTTTTCCCACACTTCTTC
AGATTTATGGAAAACTTGATTTGCCAGACACTGTTATCGAAATCGCTTTC
CTCTCTTCTTCTTTGGAGACCCCCAACAAAACAGTTTTGAGGGATAGGGA
CGTTTGGAGAAGGAAGGATCGTTAATGCCTGGACCGCAGTCGAAACATGA
TGATGATAAAATGTTATTCATTTTTTCAGGTTCCAACAGCAACGACGGTA
CCAGCGATCGCAGAAGCGATTCAAGATCGTGTCCCTAGTATCTACGACCC
TTACGAACTTAAATTTCAGGTATGTCAATATGAAGTGTTTTTTTTTTCTT
ATACAGTGTTAATAGTTCTTCCGTCTCTGTGAAGTATATAAAGAGGCTTA
ATTCATCCTCAGAATTAATTATAATTCGCCAAATTTCAAAAAAGTGAGCT
AATAATGCTGTGTCTCAGGCAAAAAAAAGTCAGCTTTGACCACTGCTTAT
ACGAGATATCAACATATTTTCTAGATTTTTTGAAACTTTGGATGCAAATA
AGTTAATGTTTCAGGTTTTAATAAAGTCTCTTCGAAAATGTCTTATAAAG
CAATCAGTAAAGATAATTCAATTACCATGGTGGCCAGCGACCCTTGAATT
CCTTGAAACCCTTGAAACACCCTTGATTTTTTTCATGCCCTTGAAAATTT
CATTGAAACCCTTGAAAAATCAATATTATTGTGGGGACCCTTGAGGTGAA
AAATTCATACCCTTGAAACCCTTGAAATCCCAAAGTTTTCTTCTTTCCTT
AATGTGTCACTGTATTTTGATTCTTTTTTCTTTATTTTTTATTTGCAGAA
AGGAGAGAGAATTTTAGTGCTTAAGATGCGTGAGGATGGCATTTGGGAAG
GACAATTAAAAAATGGTAAAAAAGGAATTTTCCCGTTCCGCTACGTCAAA
ATAGTTTCCAGTTCACCACAAGACGTAGATGCGTGGAACAACTCGTAATA
ACTCGGGATAACTCCTTAGATGTATTTCTCTTAATACAATTCATAGGTAT
TAAATTAATATGGTTCTACTCTCGAGTTTCGGGGAATGTTCAACTCGTAC
GTGAGCTGAGAGTGAGTTTGGGTGTTGAGTTTAAAGGTTGTACTTTTAAT
AGAGGTCTTATGAAATGAAACAACTCCCTGGAAAAACATAGAAAATAACA
CGCGAAAAATTTTAATGAATTTTAATATAGATCAAAATAAGATTTAAAAT
ATTTTGTCTTTCATAGTGTAGTTAGGTTTACACAAACAAAGTTATATGCT
ATGAAAATTTACTTCAAAGTCTTCTTTATGACTAAATGTAAGTACTAAAA
TAACGCACAACTCTCTATCACACCTTTGCCCATCTGGTACGCAGTGTTGT
TTCAACGTTCATAAAACGTTTTATTGACGTTACGGGACGTTAGATAAACG
TTGAAACGACGGTCGCATGCTAGCCTCAGCTCAACAAGAACTCCCTGAAA
ATCTTACATTTTGATGGTTTGCCTACTAAAAGAAACTCAGAATTATGAGC
TTTCCAAATTGGAGTGAAATAGGATATTTGTTTACTAAAACATGGTTTGA
CCTGAGAATGTATTGGAATTGCTGGTGGTGCTGTTAAATAAAGTCTAATG
TAATTGGAAGAAAAACAAACCCCACCGCTAGATTTGATGAAATCCTTCGT
TGGGAATTTTATTCAATGATTGTTGTAATGCTATTTGGTGATTTTCTTGG
ATACGGATTTGTTCAGTTGTGGACAAGATGGTTATGCACCTCCCAATTGA
ATGGTGATTATGATATGTATCAATGGAAGACCTTTACTTGAAAACTACAC
TTTTTTTGTACGCATGTTTTGGCGGCTGGATCATGATTTAATGATATTTT
GATAGTTATGTGCTATATCCCCATTAACTTCTTATTCTGACCCCAATTCT
ATCCTTAAACTAGATTTTGAAGTGTTACTTCTCCAAATAGACACAAAAAA
TCACACACCATAAGAAGAAACTTGACTCGTTTTTTATAAGAATCAGTAAC
TCTTTTTTTGAGACTCAGCTGTTCCTATATTTTTCGGCACCTTGAATTCA
TAATGATTCCTTCTACCCTGATTCTATTTTAGGGCAAGACTAATGAATTT
TAGGTTTAACATACTATTCTTTATAATTTGACTCTTAATAAGCTTAAATT
CAAACAGTCCAGGCTTGCCATTGTTCTTAAAACGTTCTAATTTTGGCATT
TTTGAGCCTCATTGTTCTAAAAAGGAGTGATAATTTTTGTAAGGAGTTTG
GGAATTTCTATGATGCAAGGTTTAAATTCGTATAATTGAAGGGTGTGTGT
ATCTTTTCCTGCAACAAAACAACTCGTCTGATTTTGCCATAATTTACATC
AATATTTTTTATCTTTTTTTCTGTTATAATAATGTAATCTCGAATGAATT
CAAAGCGCAAGTACGGTGGCCCTGAAATGTCTTCATTTTCTCACATATGA
TAAAGACCAAATATTCGGTGATGAAACAGAGATATTTTAGGGCCATCGTG
CGTCATAATGTAAATTGTTTTTTTTGTACTGAGGAATATGATTAAAATTT
TCTAGTTAATTTTTATTTTTGGTGATTTTTTTGTGTCTCTGATTCAATCG
ACTGTTTAAGATATTGACTATTAAATAGGTTCTTGAGATGACTAAATAGG
TTGATTTTTGTTGTGGGAATTATTTTTGTCAATACTTTACTCGGATAAGT
TTAACTACATATTAGACTTTGCGTTTTCGCCAATTTTTGTATTTTCGCCA
ATTTTGTTAAAATTTCTGGCTCACAAAATAAATCGCACGCCAAAAATTCT
CTTGTCACGGTATCTCTCTATTTATACTGTTTTTCTGTTTTAATTTTTGC
TATGTTATAGATTTTATTATACCTTTTTGTAATGTATATTTTTCACGATA
TTATTTTTTGTTTGATTATGTTATTGTGTAGCACGTTTCTAAAAATCTTT
TTTTTTTCGAACAAAAATATTTTCAATAGCACGCAAAAATATTATATTAG
AGAAGTCCCCCCATATGTTCTGTTTCTAACTCAATTCGAATGGTTTTGAG
CACCAAGCCAAGTCATATATGTTATCTGCCATATCGACTTTTATCTTCTC
TTGAGCCAGTATGAGACATGTTTTCAGCTGTTTTTCTTAATAAAATGAAA
TAATTTTGAATTCTCTTATTTTTATAAATTATTGGTCAAATTTTCTCTTC
GTAGCTGAGTGGGTTGAACCTTTTTAGTCATGCTCATGCCCCTTGTCTCC
ATTTATGAATAAAAACAATACAATAGAATATTTTAAACTAAATTGTCATT
ACAGTATGTGTAACTTTTGTAGAATAATTTTTTTAGTATCAATCCAATTT
TTGGTATACTTTCCCCCATTTTAAGCCAAGTCTTGTATAAATACGAAAAA
AGTATATTATTATTTTCTGTTTCTGTATTATTTGATTGACTCAGATGAGA
TGAAGTTTTTATAAGATTATACTTAAATAATTGGTCATTTGAAGTTATAA
AATGACGCGTTCTTCAGAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003271XLOC_003271Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005761-exon-sc0000059-1575043694:291042..291295TCONS_00005761-exon-sc0000059-1575043694:291042..291295Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:290526..290645TCONS_00005761-exon-sc0000059-1575043694:290526..290645Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:289826..289967TCONS_00005761-exon-sc0000059-1575043694:289826..289967Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:288903..289001TCONS_00005761-exon-sc0000059-1575043694:288903..289001Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:287899..288027TCONS_00005761-exon-sc0000059-1575043694:287899..288027Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:287334..287453TCONS_00005761-exon-sc0000059-1575043694:287334..287453Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:286177..286266TCONS_00005761-exon-sc0000059-1575043694:286177..286266Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1575043694:282924..285647TCONS_00005761-exon-sc0000059-1575043694:282924..285647Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:291042..291295TCONS_00005761-exon-sc0000059-1510915933:291042..291295Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:290526..290645TCONS_00005761-exon-sc0000059-1510915933:290526..290645Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:289826..289967TCONS_00005761-exon-sc0000059-1510915933:289826..289967Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:288903..289001TCONS_00005761-exon-sc0000059-1510915933:288903..289001Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:287899..288027TCONS_00005761-exon-sc0000059-1510915933:287899..288027Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:287334..287453TCONS_00005761-exon-sc0000059-1510915933:287334..287453Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:286177..286266TCONS_00005761-exon-sc0000059-1510915933:286177..286266Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1510915933:282924..285647TCONS_00005761-exon-sc0000059-1510915933:282924..285647Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:291042..291295TCONS_00005761-exon-sc0000059-1491911889:291042..291295Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:290526..290645TCONS_00005761-exon-sc0000059-1491911889:290526..290645Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:289826..289967TCONS_00005761-exon-sc0000059-1491911889:289826..289967Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:288903..289001TCONS_00005761-exon-sc0000059-1491911889:288903..289001Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:287899..288027TCONS_00005761-exon-sc0000059-1491911889:287899..288027Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:287334..287453TCONS_00005761-exon-sc0000059-1491911889:287334..287453Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:286177..286266TCONS_00005761-exon-sc0000059-1491911889:286177..286266Clytia hemisphaericaexon
TCONS_00005761-exon-sc0000059-1491911889:282924..285647TCONS_00005761-exon-sc0000059-1491911889:282924..285647Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:282924..291295 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.509	12.4828	34.3659	36.9991	84.759	63.5091	46.6865	57.0879	32.1236	39.3547	24.1342	23.5525	21.6335	19.4321	19.0864	19.6303	34.2062	30.9507	16.4814	23.3417	25.6399	28.4031	17.4485	20.392	21.1407	24.8561	35.1005	25.188	28.8776	28.6469
Blast
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BLAST of TCONS_00005761 vs. Swiss-Prot (Human)
Match: CRKL (Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.764e-51
Identity = 124/299 (41.47%), Postives = 174/299 (58.19%), Query Frame = 1 
Query:  253 SWYHGEISRPTSEEILLNQSPGLFLVRDSTSCKGGYVLSVSENRKVSHYIITNRQG-QYHIGDQVFNDLPDIVEFYKRHFLDTTTLXXXXXXXXXXXXXXXXXXXXXXXSIK---VKAKYNFPGNDPEDLPFRKNDNLTILKKEEDQWWLARDSQGKEGMIPANYVEXXXXXX-----------------XXXXXXXXXXXXXXPSITTGSGGYTTPNNXXXXXXXXXXXXXXXIAEAIQDRVPSIYDPYELKFQKGERILVLKMREDGIWEGQLKNGKKGIFPFRYVKIVSSSPQDVD 1086
            +WY G +SR  ++  L  Q  G+FLVRDS++C G YVLSVSEN +VSHYII +    ++ IGDQ F+ LP ++EFYK H+LDTTTL+EPA R   P   + +A   P        V+  Y+FPGND EDLPF+K + L I++K E+QWW AR+  G+ GMIP  YVE +  +S                   +  +   T+T +P+++   G   TP        +P+    P  A+AIQ RVP  YD   L  + G+ + V +M  +G WEG++ NG+KG+FPF +VKI    PQ+ D
Sbjct:   13 AWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQEFDHLPALLEFYKIHYLDTTTLIEPAPRYPSPPMGSVSAPNLPTAEDNLEYVRTLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGKHGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITP--------LPSTQNGPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIF--DPQNPD 300
The following BLAST results are available for this feature:
BLAST of TCONS_00005761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CRKL1.764e-5141.47Crk-like protein OS=Homo sapiens GN=CRKL PE=1 SV=1[more]
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