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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005737 ID=TCONS_00005737|Name=TCONS_00005737|organism=Clytia hemisphaerica|type=transcript|length=1250bp
tttttcagaaagaaaTAAATATTAAAGAAAACTCCAAAAAACGAACAAGA
TCAAGAAACGATCACGAAACAAAGATTACAACTTGAATAAAGATGACATC
ACCAAAGAACCAGAGATCCACCATTCATATCACGTTATTGGTCATTCTGT
TAGCTCTCCTCCACCAATCACATTCAAGGCCCTCCTCCTCCTCAAACAGA
TCAACATTCACCAAAGCTTTGGGCAACAGACAATTCCGTATCTGTAAAGC
AAGGACGTTCTCCTTCTTTTTACATACTGTATGCCTACATTACAGACCAG
CAAGAAACGTCTACAAAAAAGTTGGAATCAGAAAACGCCAAGATAACAAC
ATCCTGGATCGAAAGGAAGCCCGCTCTTTCATCAAGTCACGGCGACGTCG
CTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCCTTCCAAGCACG
GATGTAATGTGAACGAAATCTTCGAATATTGTAATTACGTCCCATTACCG
CAAATCGTCTTAATGAGAAGAAAGAAATTCAGCTAAATGATTTCCAACGT
GATGTGTCACCAATATTGAGACATTGATGTTCTTATTACTTCTTTATATG
GAACGATTTTAGTTTGGTAGAAACGAAAAAATGCAAATCTTGAAACCATG
TTCGCAAGTAACTGTTTCGTTTTGCTACggaacgaaatgaagccattcta
ttgatTAGAAGTAacgtaaaaattgaatataacaAATAGAACggcttcat
tttgtttcggaGTGAAACGGAATCGTAGCGTGTAATGCTGGTCTGAGTTG
CGTTCCCTCAAACGTTGGGAAGGAGACAGAACATTCACGAACCAGATTAA
TTAAGTCCTTATTGATGAATTAAAACAGATTACTGGCTTTCGTTTCGTGG
CGGTAAAACACCGTACCCTGGCATACGGAGACGTGTTACGTACACAGTAA
GGGCCAGGTGTCTTAAGATAAAATCTACAGAGAGACCAATCTTAGAGACG
TTGCTATCAAATGTTTTATGAGAAATAGCCAATTATTCTCTAGGGTTTTC
TAAATCTAAATTCTTAAGTAGAACCAAGTCCAAGTCTAGTCTAAATGAAG
GAATATTGAGATTTTCTacaatttaaaggttttatgtaaaatagttttat
ttattttttacaggcAGTAGAATACTTgtagtttttaaattttgtgtaaa
tatcatttttttaacATCCAAACCAAATAATAGAAGATGAAAAAACACAG Run BLAST on NCBI protein sequence of TCONS_00005737-protein >TCONS_00005737-protein ID=TCONS_00005737-protein|Name=TCONS_00005737-protein|organism=Clytia hemisphaerica|type=polypeptide|length=147bp
MTSPKNQRSTIHITLLVILLALLHQSHSRPSSSSNRSTFTKALGNRQFRI
CKARTFSFFLHTVCLHYRPARNVYKKVGIRKRQDNNILDRKEARSFIKSR
RRRSTDQNYMDECCGPSKHGCNVNEIFEYCNYVPLPQIVLMRRKKFS Run BLAST on NCBI transcript from alignment at sc0000059:410618..413249+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005737 ID=TCONS_00005737|Name=TCONS_00005737|organism=Clytia hemisphaerica|type=transcript|length=2632bp|location=Sequence derived from alignment at sc0000059:410618..413249+ (Clytia hemisphaerica)
tttttcagaaagaaaTAAATATTAAAGAAAACTCCAAAAAACGAACAAGA
TCAAGAAACGATCACGAAACAAAGATTACAACTTGAATAAAGATGACATC
ACCAAAGAACCAGAGATCCACCATTCATATCACGTTATTGGTCATTCTGT
TAGCTCTCCTCCACCAATCACATTCAAGGCCCTCCTCCTCCTCAAACAGA
TCAACATTCACCAAAGCTTTGGGCAACAGACAATTCCGTATCTGTAAAGC
AAGGACGTTCTCCTTCTTTTTACATACTGTATGCCTACATTACAGACCAG
CAAGAAACGTCTACAAAAAAGTTGGAATCAGAAAACGCCAAGGTAAGTGT
ATTATATTTTTTCGTCTTATTCTAGCGTCAAAATATTgaaccttcttttt
ttcttaactATGTAGAAACCATATCAAATCACTGTTAAAAGCAACAAAAT
ATTGCCGAATGCTATAATCGAATCTTGTTTTCATACAAACGGTAGATTAG
AAGTAACACTTACGgccagaatttgaaaaaagataaaccgcgaaaataaa
agaaagtgtCGGATTCAATCCGCCATCCAAAATATCTCTCAAATTTTCTG
TCAGCCCAACAATATTTCGTACCAAATATAAATCTTGAAGATTTCACATT
AAATTTTAATGAGCTGACAATGACATAGAAATCCTTCTTATCAAAGAAAG
TCGTCATTTAGTTTCATCATAAGTAAACAAACCTGTGCCGACGGTTATTT
GATCAAAATACATGGATTGTTTTCACTCACTGCATCTGAAAGTTGGTTCT
GATAGTAAACCTTCTTCAAAACACTCAACTGTTCTAAAAATAGAGATCCA
ATTAGTCTAAGCCTCGTAACCAAAGTCACTAGCAccacttttgattttac
tggtGGATGTGATGTAACGTTTTGTGAGTGATATTATAATAAGAAAGCAA
ATTTTGGGACTGGGTTTGAATTAGTCTACCAAAAAGTAAACAGACACCCA
ATGTAGAAATATTTCTCCGATAATGCTTAGGCAGAAAATGTTCAATGGTT
GACGAGTGCTCTTCTAAGAACTTCAATCAGTGTAGGCGGCCAACATAAAT
AAGCGAAAAGTTCAACTtcatttttaggaaaaaagtgTGTACACAATAAT
AAGCTTTAACGCAAGAAGGTAGGTCCCTTCCTTCCTTGCTTCCTTCCTGA
CTCAACCAACGTTCAAACCACTGCATATAAGCTTAGTGTGAAATTCGAAA
CTCTTAAGAGTTACTTAGAGGATTTATATTTGACAATTTTAGGCTCTTTT
TCTCTTTCCTGACTTATACAAGTTGACTTGACCACAGCGTTGTCACAAAT
GTGTTTTTGTGGTTGTCGAGAGCAAACAAAGTCTTCAACAAGACAAACAA
AAGAATACTTAAAAAAGGGGGCAGGGTTCAATCTAAAGATGATCTCCCTA
GCATGGTTTGTAGTAGACTGTAGAGCCcacttttagctagatttttttta
tgatttcgATAGCgttgagtccagtgaagtatcagcgccatccagtctaa
cAACGAAAATTCATGATTGGCCGCCGGACTGAGATTTTAGAAAATGACCA
CACATGAGCATACTTGAACTTTATCTTAGCATTACCTGACAAAAGGGAAT
CCCAAAGACAACAAATTGAAACACTTGAAATACGTATTATTCccttatat
tttttttgatttcttcaaCCTTAGATAACAACATCCTGGATCGAAAGGAA
GCCCGCTCTTTCATCAAGTCACGGCGACGTCGCTCAACAGATCAAAACTA
CATGGACGAATGTTGTGGCCCTTCCAAGCACGGATGTAATGTGAACGAAA
TCTTCGAATATTGTAATTACGTCCCATTACCGCAAATCGTCTTAATGAGA
AGAAAGAAATTCAGCTAAATGATTTCCAACGTGATGTGTCACCAATATTG
AGACATTGATGTTCTTATTACTTCTTTATATGGAACGATTTTAGTTTGGT
AGAAACGAAAAAATGCAAATCTTGAAACCATGTTCGCAAGTAACTGTTTC
GTTTTGCTACggaacgaaatgaagccattctattgatTAGAAGTAacgta
aaaattgaatataacaAATAGAACggcttcattttgtttcggaGTGAAAC
GGAATCGTAGCGTGTAATGCTGGTCTGAGTTGCGTTCCCTCAAACGTTGG
GAAGGAGACAGAACATTCACGAACCAGATTAATTAAGTCCTTATTGATGA
ATTAAAACAGATTACTGGCTTTCGTTTCGTGGCGGTAAAACACCGTACCC
TGGCATACGGAGACGTGTTACGTACACAGTAAGGGCCAGGTGTCTTAAGA
TAAAATCTACAGAGAGACCAATCTTAGAGACGTTGCTATCAAATGTTTTA
TGAGAAATAGCCAATTATTCTCTAGGGTTTTCTAAATCTAAATTCTTAAG
TAGAACCAAGTCCAAGTCTAGTCTAAATGAAGGAATATTGAGATTTTCTa
caatttaaaggttttatgtaaaatagttttatttattttttacaggcAGT
AGAATACTTgtagtttttaaattttgtgtaaatatcatttttttaacATC
CAAACCAAATAATAGAAGATGAAAAAACACAG Coding sequence (CDS) from alignment at sc0000059:410618..413249+ >TCONS_00005737 ID=TCONS_00005737|Name=TCONS_00005737|organism=Clytia hemisphaerica|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000059:410618..413249+ (Clytia hemisphaerica)
ATGACATCACCAAAGAACCAGAGATCCACCATTCATATCACGTTATTGGT
CATTCTGTTAGCTCTCCTCCACCAATCACATTCAAGGCCCTCCTCCTCCT
CAAACAGATCAACATTCACCAAAGCTTTGGGCAACAGACAATTCCGTATC
TGTAAAGCAAGGACGTTCTCCTTCTTTTTACATACTGTATGCCTACATTA
CAGACCAGCAAGAAACGTCTACAAAAAAGTTGGAATCAGAAAACGCCAAG
ATAACAACATCCTGGATCGAAAGGAAGCCCGCTCTTTCATCAAGTCACGG
CGACGTCGCTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCCTTC
CAAGCACGGATGTAATGTGAACGAAATCTTCGAATATTGTAATTACGTCC
CATTACCGCAAATCGTCTTAATGAGAAGAAAGAAATTCAGCTAAATGACA
TCACCAAAGAACCAGAGATCCACCATTCATATCACGTTATTGGTCATTCT
GTTAGCTCTCCTCCACCAATCACATTCAAGGCCCTCCTCCTCCTCAAACA
GATCAACATTCACCAAAGCTTTGGGCAACAGACAATTCCGTATCTGTAAA
GCAAGGACGTTCTCCTTCTTTTTACATACTGTATGCCTACATTACAGACC
AGCAAGAAACGTCTACAAAAAAGTTGGAATCAGAAAACGCCAAGATAACA
ACATCCTGGATCGAAAGGAAGCCCGCTCTTTCATCAAGTCACGGCGACGT
CGCTCAACAGATCAAAACTACATGGACGAATGTTGTGGCCCTTCCAAGCA
CGGATGTAATGTGAACGAAATCTTCGAATATTGTAATTACGTCCCATTAC
CGCAAATCGTCTTAATGAGAAGAAAGAAATTCAGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005737-exon-sc0000059-1491911889:410618..410959 | TCONS_00005737-exon-sc0000059-1491911889:410618..410959 | Clytia hemisphaerica | exon |
| TCONS_00005737-exon-sc0000059-1510915933:410618..410959 | TCONS_00005737-exon-sc0000059-1510915933:410618..410959 | Clytia hemisphaerica | exon |
| TCONS_00005737-exon-sc0000059-1575043694:410618..410959 | TCONS_00005737-exon-sc0000059-1575043694:410618..410959 | Clytia hemisphaerica | exon |
| TCONS_00005737-exon-sc0000059-1491911889:412342..413249 | TCONS_00005737-exon-sc0000059-1491911889:412342..413249 | Clytia hemisphaerica | exon |
| TCONS_00005737-exon-sc0000059-1510915933:412342..413249 | TCONS_00005737-exon-sc0000059-1510915933:412342..413249 | Clytia hemisphaerica | exon |
| TCONS_00005737-exon-sc0000059-1575043694:412342..413249 | TCONS_00005737-exon-sc0000059-1575043694:412342..413249 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:410618..413249 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR016179 | Insulin-like |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005179 | hormone activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005576 |
extracellular region |
| molecular_function |
GO:0005179 |
hormone activity |
Blast
The following BLAST results are available for this feature:
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