TCONS_00005734 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005734
Unique NameTCONS_00005734
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2199

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005734 ID=TCONS_00005734|Name=TCONS_00005734|organism=Clytia hemisphaerica|type=transcript|length=2199bp
CCACAAAGAAGTAAAGAGCTAATCTTCAAAAATTTATCTACATTTATCAT
TCATCTAAATTTATCTACAAaggcttcaaattttgacaacgTATTTCTCG
AAAAAGAAGATACTCTGATTGACAGTTTACACAAAATGGCTGACAGCAAA
GctgataaaaatgaagaaaaggagACTGGAGAGACACAGACAGGGGATGC
TTTCAAAACATACAAAGAAATTTGTGAAATCATTTCCGACGAGCTTGGAG
TGGACGATCCTGAATCCATTTCAGAGAAAGACTTGGACGAGCTCGTGAAA
CTTGCTGGTAAAAAGCTGACCGAGGCTGATATCAAGTTGTTCAATACAGT
CCGAAAGAAGAATAAGATGTACAAAATGTTGGCCGTTCCCGAATTACCAA
AGACAAAAACACTGACAGCTCCTGATTTACAAAAAATCGAATCCCTCGAA
CTAGATCAAAGATTGAAAGTCTTCAAAGgtgaaattgacaaaaaagcTCA
AGCACCCATTGATTTCTCATCAATGACAGCAGCTGAGTGGGTAAAGGTAA
TCCTTAACTGCAACATGACATATGGTCGTGTTTTTCGAAAACTTGGCAGT
CCAGATGACCGTGCAGAACAGCCATTGTTCTTTCCTCCAAACGAAAGGTT
GTTTGGAACCCCTGATTTTATGGTTTCCCAAGTGGCTTTATCTTTCTCCC
AGAAATCTGAAAAGCTAGAAAATTTCAGTGATAAGTCGGTCATGGCAAAT
CTAACCGTCGGGTCTTCATTTTCAACACCNAGAAAATTTCAGTGATAAGT
CAGTCATGGCAAATCTAACCGTCGGGTCTTCATTTTCAACACCATGGGTA
GCTGGAAGTGCTGAATATTCGCATGAAACTAAAAACAGAAGTGTCAATAA
AGATTCCACCATCAAATCTGTCTTCAAAGTCGAAGTTCCGATCGGCATAT
TCACCCTGCCGCATCCTTCAGAACTGGAAAACTCAAAGATCAAGTTAAAT
GATGACTTCAGATCATTCATCAACAAATATCTCGAAGAACATCCAGATTG
TACTAAACAGAAGGTTCAAAGAGCAATAACTCAGCGTTTCGGAGACATTG
TACCAAGAAGTGTAAAGATTGGAGTGGCATGTTACACCACGCAAACCACA
AAATTAGAAGAAAGTCAATCTCTTGAGGCTGTTTCGGACTCCTTCGCAGC
GAGCGTGACTGGCTCATATGGTCTTTTCAGTGCAGGCGGACAAACCAGTG
GTGGCAAAAGCACCTCAGATGAAAAAGGAAGCAAATCCCAAAAGAACACC
TATGCATTTTCCGCTATCGCTGGCAGCCTCCCTGATCCAAACAACCCGAT
GTCAGTAGCTGATTATCGGGTCTTACCAAACAGTTGGAGGATTATTGATT
TCGGGAATGAATTTACTCCAGTCTTTGAGTACCTTGGTGAAGATGTTAAG
AAGCGGTTGGAGGGTCTTCCAAATGAAGTGGTTCAAGAAAGCTTCAGATT
TGTTGAGGCCAAGGCGAGCGATCATGTACCAGAGAACGCAGTATCTGGTG
GATTCGATGGAGGATGGTCATATCATGCCAGAGCTTCTGTTAAAGATTTA
TTGATACCTGGAAAAGTTGGAGTTGATTCAAGTGGACGACTCGTGACAGC
TTGCATCCCATATGGTGGGGACGAACATCGTGTAGAGTCATTCCAAATTG
TAACATCCACAACCAAACTTAATTATCACGAAGCAAAGAAGGGGGACAAA
CCGCCCCTCAATGCAATTGTGGGCGGATACGATGGTGGGAATTCATACTT
CGCGAAGGGGATTGTTGATGACGTTACGATCCCTGGAAAGGTAGGTATAG
ATCAGAATGGAAAGTTCGTTGGTGCGTGTATCCCTTACGGTGGCAAGGAA
CACAGAATCGATACATTTTGGGTACTACTCAATGAATAAAACAATGATAT
TCATTCAAGAAACATTTTATCTTCGATTTTCTTACTTCCTATGTTTTTTA
TcttactttcatttttttgtaaacttaGAATATAGACTTATAAATATATA
CAGAATatagacattttttttttcataagaaccatGGTATATTTTGGTTG
AGGCTCGgctattctttttttgttcgtgaTTTTCAGCTTAAAactgttct
taacatgttcttaatacgcttaCTTTACCGGCCACCATCTTCAGCAAAT
Run BLAST on NCBI

transcript from alignment at sc0000059:325507..339292+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005734 ID=TCONS_00005734|Name=TCONS_00005734|organism=Clytia hemisphaerica|type=transcript|length=13786bp|location=Sequence derived from alignment at sc0000059:325507..339292+ (Clytia hemisphaerica)
CCACAAAGAAGTAAAGAGCTAATCTTCAAAAATTTATCTACATTTATCAT
TCATCTAAATTTATCTACAAaggcttcaaattttgacaacgTATTTCTCG
AAAAAGAAGGTAAGAAAATTCCTTACAataaatcaacatttttcacAAGC
GAAATGAGTTATGTATTGATATCTTAATGTACCTACGGGATAGTGGTTGC
CCgggggggaggggtacttaggcaaatggagggtacggtatgtgccgccc
ttaagggtaccttttttggacttccaaagtcccgctaagggNAAACGACT
CAATAGAACCCTGTGTAAGCAAGTTCCCTTTGAAACAATACATGAAATAT
CACACCATACAGAtacttttaattcttttttgaaacaATACATGAAACAT
CACATTAAACAATACTTTCAATCTCAACTTGAAACGGACAAGAACAATAT
CTTATTTAATAACAAAAGGACTCGTCAACTTAGAGCCCATTTCCCCCGAA
CAAACATAGCAATTCATAACAATATCTTACCCAGACCCTGACTGAAAATT
CGAAACTCACGAGGAAGAAATATCCTTTCTATACTGACCACAAACAAGTA
AAGACCTAATCTTCAAAAATTTATCTACATTTATCATTCATCTAAATTTG
TCTACAAaggcttcaaattttgacaacgCATTTCTCGAAAGTGAAGGTAA
GAAAATTCCTTACAATTAATCAACATTTTTCACAAGCGAAATGAGTTATA
TGTATTGATATCTTAATGTACCTATGGGATAGTGGTTGAGGTGGTACAGA
CATGAAATATGTCTATACCAAAGTAATACAATCCTAAGTACATGGTACCT
CAACACTCATTTCACTGTCTatgtttttatacatttttctgcaaaatatt
ttcaaacacaGAATATCAAACACAGAATATCTCACTTCACCACCTAACCT
GAAATATCGAGCCTTTACTTGAACGTATTGAACTCATCCTACAACTACTT
AATAGTTTTGATTTATATACTTCTCGTGAAGTACTCCGCCTAAGATGCCA
GTTTTGAAATCTTATCACTTCTAAAAAATTGAACAATTGAATATAAATCA
CCCCTGTAtcacgaagcaaatgaaaattgccccagagtcacggctttatt
agaaaatattcgaaaatcAACCCTTGGATAGATATCCTCTATGTAtcacg
aagcaaatgaaaattgccccagagtcacggctttattagaaaatattcga
aaatcAACCCTTGGATAGATATCCTCTATGTAtcacgaagcaaatgaaaa
ttgccccagagtcacggctttattagaaaatgttcgaaaatcaaCACTTG
GATAGAAATTACCCCAGCAAATCCCCAGAAAtcacgaagcaaatgaaaat
tgccccagagtcacgGCTTTATTGAAAAAGTTCAAACAAATCAATGCTCG
TCGTGTCACGAATAATTAGAACTAAAATTAACCCAGAGTCACGGTCGGAT
AATGTTAATGAtggaaaagatttttgtgaaTTATGTACCACTTGCATCAC
GAGTGAAAGAATCTGTCTCAGGGTCACGGCAAAAGGAATTGGAACTTTAG
AGGTAAAGTAAATGTTTAATATACATGAAATGGAATATTACCCTAGTATC
AAGAGTCACCAGAGAACTAgacttaaaaaagaaaacacatgaattttctt
ctttatttctttGATATCACTTCAGTGCCagagcaactgggggggggcta
tgcccccaataattttttcaaaaatagttattttacaaaatgccaagttt
ttcttttttaatttgtcataattgtcttaattgagtgcattttcaagcaa
tctagagctcaaattttcaaacccccccccctcgggtCAAACCAAGGTGT
CACAAGACTTCAGCCCCCTCAATATGAAAGTACTTCATGCACttaaataa
atcaaattaatatttacattttataagaataaaaaattACCAATATAAAT
AGTTGCGATTTGTTTAAGTGAAGCAACCCCCGTCTCCCCTTTCCATCATT
TATTCTAATCGAATTACAAGAAAATCGATCTGTTGCCCTATAGTCACGAC
TGTCCCCATTTTCACGCTACCCTATAGTAATGGATGTGCTTGAACAACTG
GTGGTTGCCATGCCATTTCAAGAATAAATGAAGCGTCATTTTTCTTGTCa
caaataagttgtgttcgcgtcctccgaccgactcactttctatcttaaaa
atccgacCCTTTTCTAGTcggaaagtcagaaaatttgtcggattttttag
cgatattattcaaagaattttgtaGATTCAGCGTTGTCAGCGTTTTTTGA
TCATCCTTaagtgtttttaagatttttatctgcaatttttcaaagattgt
ttgcgTTAAAAGNNNNNNNNNNNNNNNNNcattttataagaataaaaaat
tACCAATATAAATAGTTGCGATTTGTTTAAGTGAAGCAACCCCCGTCTCC
CCTTTCCATCATTTATTctaaagagcttgtaaaagagtttttatggtaaa
ttGATTATGTGTtatgggtttccaaagttcagaaagtctgttcacacaca
gactgtttataacattctgtgtcagacaaATCTACCtggagtctgctaaa
tcacgCCCCTCGCGCGCCTCACACGCCCTATATTTTGAACGCACCCATGC
GCCTTAGTGCCCACGCGCCTCGCGCGCCTTGCTTTTTCACGCgcctttat
ttttttcacgCGCCCTTAACTTTTCACGCGCCCATATTTTTCACGTGCCT
TAATTTTTTTCACGCGCCCTTAAATTTCCACACGCCCATACTTTTCACGc
gtcttattttttttcacgcGCCCTAAAATTTTCACGCGCCCTTAAAATTT
TCATGCACCCATATTTTTCACACGCTTATAATTTAATTGCTTTTTGGCCC
ATTCTCAcctagaaaacaaaaaaatgtacatCTCCTTTTTCTAAGTGTTG
CGAATCAATAATATTTATATTCTAGATTTTAATCttaagattttccaaaa
ttttcggtTTTCCAAATTTATTCCATTTTCATAAGGGGGTTTTTGCTCCC
TCTACAAACTTACTGTGTGATGAGTTTCCATCATttgtaaaaaatcaaat
gaacaCATTGAGTACTCAAATTCTCTAGTATCTTTCAATAACTATAAGAT
AtatctaaataaaataaaaccacTTTATNAAAATCAAATGAACACATTGA
GTACTCAAATTCTCTAGTATCTTTCAATAACTATAAGATATATctaaata
aaatcaaaccaCTTTATCTTAAATGAATCtctaattgaaaaataattcgt
cCTTTGGACGATCTCTGCTGTTAGCAgaggcacggatttcgtggggtaga
AATGCTTAATACCCCTAGTCTTGGGGAGAAAATGAGAAGTGTAAGAGAAT
TTGTCGTTTTCCCGAGGCTTTTCCCGAGACAATGTTATATTTGATAGAAC
CATTTATAAATAtgtacagtaaaacctctaatcaacggacactctaaaag
gcggaaacctctgattagcggacaatttcattttccccggccgtttccta
gtcaaatcctcataaaaaagtttctaaaagacggacactcaattagcgga
ccctctgattagcggataatttttttgcacgaaatggccaaaacccctat
tttagctcttcAATTAGTGGACGTTGcatatcaaacgggtcacagacgcc
caaaattgaaaaaaaaaatttagatatttttatttcaagcacttattagt
cttattattcaagttttttctacaaatttccagttttcccttgacccatt
caacgaatttaggtgggccaaagaaatcataaatcactggtacTTCAAGT
CCGTACCCACCACCTCGGTTTAACCTCTTGCCAGTCACTCGAgctcttct
atggcctagtgtctgcagataagtactttagaccccaattttgtattttc
cacACCCTGGGATTgcttaatttcaaaattggagctccgagatcaaaagt
ttctaaaaggcggacacttctaattagcggacactaacccctttccccga
tggtttCCGCTAAtaagaggttccactgtatgtGTTTTAAAACTAAGTCC
TATATCAAATTAAGGAGATAATCTGTGCCAGCTGCTATTTGCCATATATA
ACTCAATTTTAAGGCGCGTGAAAAATATAGGCGCGTGAAAATTTAAGGGC
GcgtgaaaaaaataaaggcGCGTGAAAAACATTTGCGCGAGAACATTTAA
GGGCGCGTGAAAAAATTAAGGCGTGTGAAAAATATGGGCGCGTGAAAAAG
GAAGGCGCGTGAGGNGAAAAACATAGGCGCGTGGGCactaaggcgcgtgg
gcgcatTCAAAATATAGGGCGCGTGAGGCGcgtgatttagcagactcatc
TACCTGCAgcaagctctataatcttagaactttgtgaagtgaggtatttt
ttgtttttttctagcCCACACTATTCATATCATTTTTGGATGACAAGAGA
AGAATGCACgataatattttcttttcaaatgttttcttaCAAATCATATG
AATAGTTTTGGGCTATTCAtcattttattacaagtttCGTTAATTCTGAA
AGCTTAAGGCAtcagtggaaaaacaccctatgttatgattctctatcgct
GACACTTTTTTAAAAGCGTTGATGACTTTTTTGAGTTGTATTTTCGGGTG
TGTTTACACTGCAAGTTTCAGTGATCATGCAATCGTGCAAACTCAGATAA
TGAAAAACAAAGGAGAGGATCGTGCACTTCTTTGTTCTCATATTTTCAAG
CAACTTTCAAGCAATAGTGTGAACACGCCCTTCAACGACGCGAATAAAAG
TATAAACTTTGAACTTAGtacaagatcttggattgtcgtcgtggttactt
ttctttgcgttgattgcgcgctgattGGTCGTCacaggtcgatatatgat
ttcggaACGTGATTTTCACGGTATGAATTATCGGTAATTCTTCATCataa
ttaagggctctgaccatagtgaatttttcataattgccgtgtttaaaatg
tgttttctgactgatgtaaccaacaaaactatgacatGCTATagattttc
tgttagacaaactattcctgaatctgaaaattcaaaaactgcattgaaaa
aatttgatgaagaagaaaatgaagacttttgcgaggaagagtatttcaac
tttgaagagcttagtttcggcgaagaaaaaacattttgaaaattttttcg
cagtaaatggtgtatcttttactgaacaataaaatcttttgcggaaaatt
tttgtaaatgcttctttgtctcgaaatcttcaaaatagtggtttttcatc
aatttttcatctggattttgcttaaaaaaacagttatANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtaacttttgacacatcttt
ttagaaaaattttccgcaaaatttaaaatagttcaattctttgcggacag
tttgaaaaaagttcgaagcaaaaaggttaattacccattaaaacttagca
ctttttctaaaagaaggtgatgatgcaacatattattaacgtctttttaa
agttcataacgtcatttttgcaattaagttcttaattactcttaaggggt
ttgactAAAAAGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttctgactatggt
cagagcccttaaatgtgAGTTCAAAAaggtaaatttgaattttttgtctg
TAAACGTCAACATAATACTTGTTTGTCTTCTTTATTACGCATTTAGACAg
gatcaaaaagaaaatgaatatattttgCATCAGTGAATTTTCCCCTGTAC
CAGTTCCCCGGTGAAAAGCCATTCACCTAGAGAGAAAAATGTGAACTTTA
AATCCTTGGAGAAAAACTACCTTTTGAAACACTATCAGATTTCCATCTGC
AAGATAGATTTTTTGACTTCACTTCAGCTAAAGGTTTACAAGgcatcttt
tgattttttgatgctATCAAATCATTGACACAAAAAGGTGAAATAGTAAT
TGACCTTTTTCGTCACTGAAATTTCGCTGACGTATAGTAACCAATTTCAC
TTTCCTTCTAGATACTCTGATTGACAGTTTACACAAAATGGCTGACAGCA
AAGGTAAGGCTACCAagttttttcaatatattttggctggaactaatttt
ttactattttttcagTCTGGAAATACCAGTGTAGTGTAAAGAAGGTTTCA
AACTTCATTTGATGAAAGCACCCCTTTgcagcggacccaaaattcacacc
atcacgccacgaaaaaccctctaTCACGCCTTTACGCCAACCAGAGAGGA
GGGCCTTTGAAGCTTTTTCTTAAGTTTAAGCCGTGGCTGAATGTGATTTC
GCGGCTTAAAGGCTCTGatcatagtgaatttttcatatttttacatgtaa
aaaatGTAGATTTTTGCCTGAAGTAgccaacaaaactatgacatgttata
catgTTCTGTTAGGGCAATTATTCTTGATTCcgaaaattcaaaagtcaag
atgaaaataattgatgaagaagaagatgactTTTGCAAAggagagtattt
caactttgaggaccttattttcggcgaagaaaatacattttttaataatt
ttagaTTAGCGGTAGATTGTGTATCTTCTTTAGatgaattaaaaataaat
tttcggaaaatttttgtaaaaacaactttcttgtctcaagctcttgaaaa
tagtggtttttacgaaatttttcatccgaaattttctttaagaaataaTC
ATAGCTTTTGACAAATTAATTTAGAAACATTTTCCGAAAAGTttcaaata
gttcaattctttgcagacaatttaaagaaagttcgaaacaaaaaggttaa
ttacccattaaaactaagctaTTTTTGTTACGTCTTTTTatgattaaatt
tttaattactctCAACAAAATAAATTAACAAACAACTTATGAATGCTGTT
TTTTGGTAAAAGTGTCAAGGAACTTAAAACacaagttttatcttcaaatt
tcttaaaaCCGATTTTCTAtctttcagctgataaaaatgaagaaaaggag
ACTGGAGAGACACAGACAGGGGATGCTTTCAAAACATACAAAGAAATTTG
TGAAATCATTTCCGACGAGCTTGGAGTGGACGATCCTGAATCCATTTCAG
AGAAAGACTTGGACGAGCTCGTGAAACTTGCTGGTAAAAAGCTGACCGAG
GCTGATATCAAGTTGTTCAATACAGTCCGAAAGAAGAATAAGATGTACAA
AATGTTGGCCGTTCCCGAATTACCAAAGACAAAAACACTGACAGCTCCTG
ATTTACAAAAAATCGAATCCCTCGAACTAGATCAAAGATTGAAAGTCTTC
AAAGgtgaaattgacaaaaaagcTCAAGCACCCATTGATTTCTCATCAAT
GACAGCAGCTGAGTGGGTAAAGGTAATCCTTAACTGCAACATGACATATG
GTCGTGTTTTTCGAAAACTTGGCAGTCCAGATGACCGTGCAGAACAGCCA
TTGTTCTTTCCTCCAAACGAAAGGTTGTTTGGAACCCCTGATTTTATGGT
TTCCCAAGTGGCTTTATCTTTCTCCCAGAAATCTGAAAAGCTAGAAAATT
TCAGTGATAAGTCGGTCATGGCAAATCTAACCGTCGGGTCTTCATTTTCA
ACACCNAGAAAATTTCAGTGATAAGTCAGTCATGGCAAATCTAACCGTCG
GGTCTTCATTTTCAACACCATGGGTAGCTGGAAGTGCTGAATATTCGCAT
GAAACTAAAAACAGAAGTGTCAATAAAGATTCCACCATCAAATCTGTCTT
CAAAGTCGAAGTTCCGATCGGCATATTCACCCTGCCGCATCCTTCAGAAC
TGGAAAACTCAAAGATCAAGTTAAATGATGACTTCAGATCATTCATCAAC
AAATATCTCGAAGAACATCCAGATTGTACTAAACAGAAGGTTCAAAGAGC
AATAACTCAGCGTTTCGGAGACATTGTACCAAGAAGTGTAAAGATTGGAG
TGGCATGTTACACCACGCAAACCACAAAATTAGAAGAAAGTCAATCTCTT
GAGGCTGTTTCGGACTCCTTCGCAGCGAGCGTGACTGGCTCATATGGTCT
TTTCAGTGCAGGCGGACAAACCAGTGGTGGCAAAAGCACCTCAGATGAAA
AAGGAAGCAAATCCCAAAAGAACACCTATGCATTTTCCGCTATCGCTGGC
AGCCTCCCTGATCCAAACAACCCGATGTCAGTAGCTGATTATCGGGTCTT
ACCAAACAGTTGGAGGATTATTGATTTCGGGAATGAATTTACTCCAGTCT
TTGAGTACCTTGGTGAAGATGTTAAGAAGCGGTTGGAGGGTAagagaaat
gtttttcttttctttttttttacttttcctctTCTCTTTGACGAATATCT
TGCCAATTTATTTGACCTCTAGAAAGGTTATATTTCTCCATTGGTCCTTG
TTTCCTGCGGGGAGAATGGAGTGCAACACAATAACCGTAAGTGTCACttt
aaaaataatgaaacaTTGTttaaatacactcttctcgagatgcaaaAAAG
GCCTCGTTTTTAATTATTGTTGCCTATGTAACTCAACATCAGCATCACTC
GACATGTAATTATTGTTTGTGAACGTTTacacttttgtttttaaaactga
aaactgccttttgtttaatgtttattacgaaaaagaaaagtgaaCTCTGA
TTCTAATTTCGAAAATAATCTTCCTCTCCATTTGAATATCTGAATAATGT
AGAGTCAcctttgaaagtttcaaaatatagcaaatttagaaaaataacgG
ATTACTCAAAACTTCTTGTGGAGAAATGCGTTTTCTGCACTCTATTGTTA
AATTTTGTATTCGTCATGGGTACTAATCAGGGGGTAAGGATTATAAAAAA
CATCATATTTTAGGCTAGCGAATCCAAAACATATCCCCCGGAAAAAGTTA
TACGAAAtctaaaatcgctagcgaaaatcTAAACGCTGTAGAAAAAGGCT
TCAGACACGTATGGGTATCATTATATAGATGTCACTTTTCTTCTTTACAG
GTCTTCCAAATGAAGTGGTTCAAGAAAGCTTCAGGTAATGAGATATTATT
TTACTCACGTCAAACTAATTTTGATATACAGAGCTTAGACATGAGAGCGC
AATGATCCAAATCATTATGGGTCATATCTTAAATTCTAAACAAGACAAGA
AGCCCGttaggcgtgaaggcccagcaaaagcgaaatttacgcgattttcg
cgaatttcgggatttccaaaaattccaaaaaatgtttaacaagatttcag
gaaagggatgtccaaaggatttaaaattttactgcgtcGAGCAAAACAAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAATGTAACAGCTTCTTTGTTtaggt
aaacaaacccaaaccatttgcagtttagtgaaacagtttcagttttttgg
ttttgaacattaaaaggtatgcaaccttagtctccattgccatatgccat
attccatttaatcggtatttgaaataattctgtgtcaagtttgaaaaatc
aagccaggaagccaccaattcgttgaacgagagagatctagaaatatata
accattttcacacgtagcatcatggaaaaatgTCCAatattgttcaaatt
tacacatgagctgcattttagtctccattgccatattccattttaaaaat
cggtatatatttgaaataattccgtgtcgagtttgaaaaatcaagccacc
aattcgttaaacgagacagatctagaaatatataaccattttcacacgta
gcatcatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccatattccattt
aatcggtatttgaaataattccgtgtcgagtttgaaaaatcaagccacca
attcgttaaacgagacagatctagaaataaccatttttacacgtagcatc
atggagaAAGTTCCAACCCTGTTCTAATTTACACAtgaactccattttag
tgttcatcagcaaattccagaatcaagtctttttgaaaacaagaaactaa
aagtgaaagtgatttaaggtatagaattttcactcagaaagctttatgaa
aactataacatatgacagaatgttgaaaaagtttacaaagaaaaatcact
acaaattttctttggtttgaaagtctcttgaccactaaagcaaagaaaat
gttcaagaaagtatgaatcaacaccAGAACACATGAAATCAATCTCCTCG
CTtcaaccgccatcttgttttgttttgaaaacgtttgttgtttaaggagc
gcggaatcagaaaatatatcttttttagccagtacccgactttcgcaagc
ttttccctaccagacggcaaaaagtgtgttactggtattaagcgccgttt
ctaccaaaacggacagacagaaggaaacacggaaaaaaatagtgacactc
tctttaaaggcccactcgctagcgctgggccaataaagCTATATGTAATA
TAATTTATTGCAAGCACCACCCAATCCCGGCGCCCACTTCACCCACATCA
CACTCACAATATACAGACCACTCGTTCATAATCTGTCTATTGTCAAGTCA
ATTTTATGGTGTTATTTTTAGATTTGTTGAGGCCAAGGCGAGCGATCATG
TACCAGAGAACGCAGTATCTGGTGGATTCGATGGAGGATGGTCATATCAT
GCCAGAGCTTCTGTTAAAGATTTATTGATACCTGGAAAAGTTGGAGTTGA
TTCAAGTGGACGACTCGTGACAGCTTGCATCCCATATGGTAAATGTTTAT
AATATACCTTGTGTTAAGTCGTATAGGGTGACCAAGGGCCTACAATCAAA
GctataatatttgagaaaaaggagAATTGCctgcaaaattttagaaacca
caaattatttttgagtgCTTTAATTAACTTTGGGAATGCAGAGTTTTAAC
ATTAAATTTAAGActtagaatatagcctggaaggcactaaacccctccca
aatcgaattATCCGATGAAATAAAGTTGAAGTACTAAAATCGACAAAAAA
TACCACCAAAAGTCTCATTATATTTCGACACTGATTGTAAGAATTTTGCC
TCTCTCAGCCAAAAGTTTCCGAATTCGATATAATAgtagtgtgcaaaatt
tcagagttaaaaaacaactttctgTTTTTTATGCTGAGCTTCCTTCCACA
CTTGTACTTgataatgaaattgaaaattttcattttaagagTCATAATGC
CCAAATCGcccaaaaaatcatattttgatGAACGCATGTCAGAAAGCCGT
ATTTTATCCGTTTTCCTCTCTCGTCCCGTGCCTGTTATGTCTATCACAAC
TCTTGGAAAGTCGAGCTGTGTAGAGTGTAGAGCTTTTTTAGAATTTGAAC
TATAATGTTGGACATAATATAATATATagtttttttcttgtttctgGTGG
GTGGATAACTTAGGCCCAACCCCTTTTACCCCCAGTTCAATGCTGGATAA
GACTTGGTAAACAATAGCAAGCTTTTCCCACCCATCAACATTGATTTTGG
GGGTGGAGGGGGCTGGGATTTTTTATAAGgtttttgccaaatattttgtc
caacATTGTAGCTCAATTCACAGATATCTTACAGCATTAGCTAATCTCTC
TTTCTGAAGCCATGGTAGTTGAAGCAAAATTATGCGCCATCTTTGCTTAG
AAGACCATAGTAATAAACAACAGTTCAGTACCAGCAACTTTTTTAAACAG
AACAAACAAGTGACATGGTGGGAAACTAAGAGGCGAGGGAATGGACTTCA
TTGGTCAAATTTTCGGGACCGAACAGGGGTCTACTTATTTGTTTACTtag
tgttttttatataagatatctatggCTCCACTAAGTGACATTACATTAAT
CCATCTCAATGCAATGATGTctttttgttgttatttttccCAAAAGAGCA
TTCCTACGCGCctgtttttcaattatttttacacCAAAAAATTGACTTTA
GGTGGGGACGAACATCGTGTAGAGTCATTCCAAATTGTAACATCCACAAC
CAAACTTAATTATCACGAAGCAAAGAAGGGGGACAAACCGCCCCTCAATG
CAATTGTGGGCGGATACGATGGTGGGAATTCATACTTCGCGAAGGGGATT
GTTGATGACGTTACGATCCCTGGAAAGGTAGGTATAGATCAGAATGGAAA
GTTCGTTGGTGCGTGTATCCCTTACGGTGGCAAGGAACACAGAATCGATA
CATTTTGGGTACTACTCAATGAATAAAACAATGATATTCATTCAAGAAAC
ATTTTATCTTCGATTTTCTTACTTCCTATGTTTTTTATcttactttcatt
tttttgtaaacttaGAATATAGACTTATAAATATATACAGAATatagaca
ttttttttttcataagaaccatGGTATATTTTGGTTGAGGCTCGgctatt
ctttttttgttcgtgaTTTTCAGCTTAAAactgttcttaacatgttctta
atacgcttaCTTTACCGGCCACCATCTTCAGCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003252XLOC_003252Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005734-exon-sc0000059-1491911889:325507..325615TCONS_00005734-exon-sc0000059-1491911889:325507..325615Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:325507..325615TCONS_00005734-exon-sc0000059-1510915933:325507..325615Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:325507..325615TCONS_00005734-exon-sc0000059-1575043694:325507..325615Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1491911889:331968..332009TCONS_00005734-exon-sc0000059-1491911889:331968..332009Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:331968..332009TCONS_00005734-exon-sc0000059-1510915933:331968..332009Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:331968..332009TCONS_00005734-exon-sc0000059-1575043694:331968..332009Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1491911889:332934..334245TCONS_00005734-exon-sc0000059-1491911889:332934..334245Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:332934..334245TCONS_00005734-exon-sc0000059-1510915933:332934..334245Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:332934..334245TCONS_00005734-exon-sc0000059-1575043694:332934..334245Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1491911889:334957..334990TCONS_00005734-exon-sc0000059-1491911889:334957..334990Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:334957..334990TCONS_00005734-exon-sc0000059-1510915933:334957..334990Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:334957..334990TCONS_00005734-exon-sc0000059-1575043694:334957..334990Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1491911889:337378..337544TCONS_00005734-exon-sc0000059-1491911889:337378..337544Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:337378..337544TCONS_00005734-exon-sc0000059-1510915933:337378..337544Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:337378..337544TCONS_00005734-exon-sc0000059-1575043694:337378..337544Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1491911889:338758..339292TCONS_00005734-exon-sc0000059-1491911889:338758..339292Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1510915933:338758..339292TCONS_00005734-exon-sc0000059-1510915933:338758..339292Clytia hemisphaericaexon
TCONS_00005734-exon-sc0000059-1575043694:338758..339292TCONS_00005734-exon-sc0000059-1575043694:338758..339292Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000059supercontigsc0000059:325507..339292 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0300922	0	0	0	0	0	0	0	0.900473	0	3.68908e-07	0	0.144002	0	2.90179e-09	67.1622	61.3305	0	0	11.2001	8.95869	8.80896e-05	1.28521	1.78522e-07	2.45043e-08	5.07854	0	1.42644e-06	0.592572
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005734 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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