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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005725 ID=TCONS_00005725|Name=TCONS_00005725|organism=Clytia hemisphaerica|type=transcript|length=291bp
TATGTAAAACCTTCTTCAAATGCACTAATGGAAGAATGGAGCTGGAACGA
GCAAATAAAGAATGGTTGACGTTcattcaaaaatggttgaacaCACTGAA
AAAGAAACATGTTCTTTCGTTAAACGTACTTCAACAATTCGAAGATAAAT
CTCCGTTATTAGAAACTCACTTGAAGGCAATTTCATCTTGGCTTAAGAAT
AATGGCATCAAAGAAGCAACTAAATGTTTACCAACTGTCGGAAAATTATT
AGCTGGATTATCCAAGATTTGTCTCGTCCTCGCTAAAGGTT Run BLAST on NCBI transcript from alignment at sc0000059:211528..213336+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005725 ID=TCONS_00005725|Name=TCONS_00005725|organism=Clytia hemisphaerica|type=transcript|length=1809bp|location=Sequence derived from alignment at sc0000059:211528..213336+ (Clytia hemisphaerica)
TATGTAAAACCTTCTTCAAATGCACTAATGGAAGAATGGAGCTGGAACGA
GCAAATAAAGAATGGTTGACGTTcattcaaaaatggttgaacaCACTGAA
AAAGAAACATGTTCTTTCGTTAAACGTACTTCAACAATTCGAAGATAAAT
CTCCGTTATTAGAAACTCACTTGAAGGCAATTTCATCTTGGCTTAAGAAT
AATGTAAGAATTTCATgctttcatttcaatttcattcaacatttgttccc
ttctttcaaattttcagctttgaaaaatgtaaaaactgcAAATGCAATGC
AAtataaatttttctaaaaatgagttTTATTGGCTTTTTTTAGAATTCCT
TCTTTCATGGTCTCTTGCTAAATgtccaaaatttttagaaaatagtaaga
aaaaagtttttctcggGACAGGCAATGTTCTATGTGTCAAAGTGGCAGAT
TATTATAGCATTTTTACACTTCTGTGTCAcggacccgctgggaccccgcc
ccattgggaaattgaccttgatttcatccccattggaaATTCAAGGGAAA
AATTGCACTCTTAAACCATCCCCATTAGACTTTTCACAATCGAATTGAGA
TTCTGATAGATATAAAAATTAATCCCCACTGTAGAAATCATTCTCAGCGG
GGATGTGATACAGGGGTATATTTCTTCCTGAAAACTAACAAAAAATAGAG
AAGTTTAAAATGTTGTAGCAACTTTGGTTAATTTTTAGGGCATCAAAGAA
GCAACTAAATGTTTACCAACTGTCGGAAAATTATTAGCTGGATTATCCAA
GATTTGTCTCGTCCTCGCTAAAGGTTTGTTTGGTTCTGGGTATTATTCTT
AATCCATGATATGagacattgcaatgtcttctggcattacatcacggacc
caatagacgatatcggcttcacatgaaaattcagatttgacccccgagaa
ttccccacaatgctttgtgcggaaaaaatttcaccgtgaacttttttccg
cgcaaagcattgtgggcaatttccgatatcgtctattcatgatatgcacc
actgcaatgacttcacgaaattatgcaacttttctgtttttgttccaccc
aatacgtcactttttctattgtttaagtgacatATTGGGTGGAAATTCTt
taaagttctcagaagactctcNGGCTTAAGAATAATGTAAGAATTTCATg
ctttcatttcaatttcattcaacatttgttcccttctttcaaattttcag
ctttgaaaaatgtaaaaactgcAAATGCAATGCAAtataaatttttctaa
aaatgagttTTATTGGCTTTTTTTAGAATTCCTTCTTTCATGGTCTCTTG
CTAAATgtccaaaatttttagaaaatagtaagaaaaaagtttttctcggG
ACAGGCAATGTTCTATGTGTCAAAGTGGCAGATTATTATAGCATTTTTAC
ACTTCTGTGTCAcggacccgctgggaccccgccccattgggaaattgacc
ttgatttcatccccattggaaATTCAAGGGAAAAATTGCACTCTTAAACC
ATCCCCATTAGACTTTTCACAATCGAATTGAGATTCTGATAGATATAAAA
ATTAATCCCCACTGTAGAAATCATTCTCAGCGGGGATGTGATACAGGGGT
ATATTTCTTCCTGAAAACTAACAAAAAATAGAGAAGTTTAAAATGTTGTA
GCAACTTTGGTTAATTTTTAGGGCATCAAAGAAGCAACTAAATGTTTACC
AACTGTCGGAAAATTATTAGCTGGATTATCCAAGATTTGTCTCGTCCTCG
CTAAAGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005725-exon-sc0000059-1491911889:211528..211730 | TCONS_00005725-exon-sc0000059-1491911889:211528..211730 | Clytia hemisphaerica | exon |
| TCONS_00005725-exon-sc0000059-1510915933:211528..211730 | TCONS_00005725-exon-sc0000059-1510915933:211528..211730 | Clytia hemisphaerica | exon |
| TCONS_00005725-exon-sc0000059-1575043694:211528..211730 | TCONS_00005725-exon-sc0000059-1575043694:211528..211730 | Clytia hemisphaerica | exon |
| TCONS_00005725-exon-sc0000059-1491911889:213249..213336 | TCONS_00005725-exon-sc0000059-1491911889:213249..213336 | Clytia hemisphaerica | exon |
| TCONS_00005725-exon-sc0000059-1510915933:213249..213336 | TCONS_00005725-exon-sc0000059-1510915933:213249..213336 | Clytia hemisphaerica | exon |
| TCONS_00005725-exon-sc0000059-1575043694:213249..213336 | TCONS_00005725-exon-sc0000059-1575043694:213249..213336 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000059 | supercontig | sc0000059:211528..213336 + |
Blast
The following BLAST results are available for this feature:
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