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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005702 ID=TCONS_00005702|Name=TCONS_00005702|organism=Clytia hemisphaerica|type=transcript|length=1603bp
GTTCCAGCAGAAGTTTCGGCTTTGAAGCCTGAACCTATTGATGATTCCAG
CTGTACACAACAGAAATCTTTATTTCAACAAATTACTGATACCAGGAACA
GTCAAGGTGTTTTTGATCGACAGGAAAATCAGTTTAAGAAATACAACCTT
GGTAATGGTTTAACAATGAACGATCCCATTGCCACAGCTGACTATCTTTT
GGAAAGGGAATATGTCGAATCATTTTTGTTCGATTCACAGAATTACCACG
AGGCATTATTCATACCACCCGTgttcaaatcaaatcaatataCCAAAGAA
TCGTCAGTTTCCATTCTGGATTATGATGTTGTGAAAGATGTTGAAAAAAC
TTTGGGAAATATGGTGAAGAATTCCCCTAGCCATTGGTTTACAACTGACT
TTCATGCTTTCATTCAGATGCAGAAATCTGTCAGTCGTACCACTACTTTG
ACCGAGATTAACAGTAAAGAATTTGACCAGTGGActacaaaaagtaaaat
taagcATCTTGTAGTCAAGGAGCTTCAGACCGATCAGAACCTCCCACAAA
TGACCATCGATATTGATATCTTTATTCAAAAAAGCTTAATTGAATTACGA
CAGCAGTCGAAGAATGGATCAAATCTAGAGACATTTCTTCAACAATGCAT
CATCAAACTACCGCGGAAAGGAGGCAGAAATAAAGTTAAAGCAGACGTCA
ACAAATTAGTGAGCGAATCCAACGTTTGTGAGGATTCCAATATCAAACGG
CTTTGGGATTTACAATTGAGTGACCTAGGAGAGGAGGTTGAGCATTGGTT
TTTTGACCAACTTCGATCGATTAAGGATGAAACTTTGAACGACCTGGTCA
TTTTACAATCTTCACAATTCATGACAAACgttgaaaacaagaaacatcGG
GAATACGATCTTCTCATCTTGTCCCATTCGAGAAAATTGGTGATCGGTAT
TGAACTTAAAAGAACATCAACTGATAAGGCGCTTCTAAGAGCATGTGAAC
AGCTTGACAAATATCGAACATCGTTGGAAGAGACATTGGGGGACCAGTTT
GGTTCAGGATGGCAGTTCTTCCCGGTTATCTGTGTCCAACAAGATTCACG
TACCTTCAAAAGCGCACACTACATCAATACTATGACTGATATTCGAGATT
GGTTATCAAATGTATTGAAGAAATTCCCTATGATCATCAACCAAACTGAC
TTGACCGACTCTTTGGCAAACCTCAAGAAAGTATTGCGCATTATTGTGTT
CGCAGTACACATTTCTGTACCCGTTACTCAAACCAACTGGGTAGATTACA
TTAGCCAGGCAATCGACAATGTCTCCACTCACGATAACCTGATTTTCTAC
TCCAACCAGCAATTAGCTGCATTCAAATCAGATGATCCAAAGTTTAAGAG
AATCCATGTGCAGGGAAATTTTGGAACAGGAAAAAGCATTTTGCTTAGAG
AGAAGGCTAAGCAAATATGCCAGCGAGATGCATCCCTAAAAAACAGAGTT
GTGTACGTAACATATAACACGTCGAGCAGAAAAATGCTCCAAACATACTA
CCTTGAGATGGTTTTAGGACCGTTTGGTGTTGTTGTTGAAGAATTTGATC
CAG Run BLAST on NCBI protein sequence of TCONS_00005702-protein >TCONS_00005702-protein ID=TCONS_00005702-protein|Name=TCONS_00005702-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
VPAEVSALKPEPIDDSSCTQQKSLFQQITDTRNSQGVFDRQENQFKKYNL
GNGLTMNDPIATADYLLEREYVESFLFDSQNYHEALFIPPVFKSNQYTKE
SSVSILDYDVVKDVEKTLGNMVKNSPSHWFTTDFHAFIQMQKSVSRTTTL
TEINSKEFDQWTTKSKIKHLVVKELQTDQNLPQMTIDIDIFIQKSLIELR
QQSKNGSNLETFLQQCIIKLPRKGGRNKVKADVNKLVSESNVCEDSNIKR
LWDLQLSDLGEEVEHWFFDQLRSIKDETLNDLVILQSSQFMTNVENKKHR
EYDLLILSHSRKLVIGIELKRTSTDKALLRACEQLDKYRTSLEETLGDQF
GSGWQFFPVICVQQDSRTFKSAHYINTMTDIRDWLSNVLKKFPMIINQTD
LTDSLANLKKVLRIIVFAVHISVPVTQTNWVDYISQAIDNVSTHDNLIFY
SNQQLAAFKSDDPKFKRIHVQGNFGTGKSILLREKAKQICQRDASLKNRV
VYVTYNTSSRKMLQTYYLEMVLGPFGVVVEEFDP Run BLAST on NCBI transcript from alignment at sc0000054:602120..603722 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005702 ID=TCONS_00005702|Name=TCONS_00005702|organism=Clytia hemisphaerica|type=transcript|length=1603bp|location=Sequence derived from alignment at sc0000054:602120..603722 (Clytia hemisphaerica)
CTGGATCAAATTCTTCAACAACAACACCAAACGGTCCTAAAACCATCTCA
AGGTAGTATGTTTGGAGCATTTTTCTGCTCGACGTGTTATATGTTACGTA
CACAACTCTGTTTTTTAGGGATGCATCTCGCTGGCATATTTGCTTAGCCT
TCTCTCTAAGCAAAATGCTTTTTCCTGTTCCAAAATTTCCCTGCACATGG
ATTCTCTTAAACTTTGGATCATCTGATTTGAATGCAGCTAATTGCTGGTT
GGAGTAGAAAATCAGGTTATCGTGAGTGGAGACATTGTCGATTGCCTGGC
TAATGTAATCTACCCAGTTGGTTTGAGTAACGGGTACAGAAATGTGTACT
GCGAACACAATAATGCGCAATACTTTCTTGAGGTTTGCCAAAGAGTCGGT
CAAGTCAGTTTGGTTGATGATCATAGGGAATTTCTTCAATACATTTGATA
ACCAATCTCGAATATCAGTCATAGTATTGATGTAGTGTGCGCTTTTGAAG
GTACGTGAATCTTGTTGGACACAGATAACCGGGAAGAACTGCCATCCTGA
ACCAAACTGGTCCCCCAATGTCTCTTCCAACGATGTTCGATATTTGTCAA
GCTGTTCACATGCTCTTAGAAGCGCCTTATCAGTTGATGTTCTTTTAAGT
TCAATACCGATCACCAATTTTCTCGAATGGGACAAGATGAGAAGATCGTA
TTCCCgatgtttcttgttttcaacGTTTGTCATGAATTGTGAAGATTGTA
AAATGACCAGGTCGTTCAAAGTTTCATCCTTAATCGATCGAAGTTGGTCA
AAAAACCAATGCTCAACCTCCTCTCCTAGGTCACTCAATTGTAAATCCCA
AAGCCGTTTGATATTGGAATCCTCACAAACGTTGGATTCGCTCACTAATT
TGTTGACGTCTGCTTTAACTTTATTTCTGCCTCCTTTCCGCGGTAGTTTG
ATGATGCATTGTTGAAGAAATGTCTCTAGATTTGATCCATTCTTCGACTG
CTGTCGTAATTCAATTAAGCTTTTTTGAATAAAGATATCAATATCGATGG
TCATTTGTGGGAGGTTCTGATCGGTCTGAAGCTCCTTGACTACAAGATgc
ttaattttactttttgtagTCCACTGGTCAAATTCTTTACTGTTAATCTC
GGTCAAAGTAGTGGTACGACTGACAGATTTCTGCATCTGAATGAAAGCAT
GAAAGTCAGTTGTAAACCAATGGCTAGGGGAATTCTTCACCATATTTCCC
AAAGTTTTTTCAACATCTTTCACAACATCATAATCCAGAATGGAAACTGA
CGATTCTTTGGtatattgatttgatttgaacACGGGTGGTATGAATAATG
CCTCGTGGTAATTCTGTGAATCGAACAAAAATGATTCGACATATTCCCTT
TCCAAAAGATAGTCAGCTGTGGCAATGGGATCGTTCATTGTTAAACCATT
ACCAAGGTTGTATTTCTTAAACTGATTTTCCTGTCGATCAAAAACACCTT
GACTGTTCCTGGTATCAGTAATTTGTTGAAATAAAGATTTCTGTTGTGTA
CAGCTGGAATCATCAATAGGTTCAGGCTTCAAAGCCGAAACTTCTGCTGG
AAC Coding sequence (CDS) from alignment at sc0000054:602120..603722 >TCONS_00005702 ID=TCONS_00005702|Name=TCONS_00005702|organism=Clytia hemisphaerica|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000054:602120..603722 (Clytia hemisphaerica)
TGGATCAAATTCTTCAACAACAACACCAAACGGTCCTAAAACCATCTCAA
GGTAGTATGTTTGGAGCATTTTTCTGCTCGACGTGTTATATGTTACGTAC
ACAACTCTGTTTTTTAGGGATGCATCTCGCTGGCATATTTGCTTAGCCTT
CTCTCTAAGCAAAATGCTTTTTCCTGTTCCAAAATTTCCCTGCACATGGA
TTCTCTTAAACTTTGGATCATCTGATTTGAATGCAGCTAATTGCTGGTTG
GAGTAGAAAATCAGGTTATCGTGAGTGGAGACATTGTCGATTGCCTGGCT
AATGTAATCTACCCAGTTGGTTTGAGTAACGGGTACAGAAATGTGTACTG
CGAACACAATAATGCGCAATACTTTCTTGAGGTTTGCCAAAGAGTCGGTC
AAGTCAGTTTGGTTGATGATCATAGGGAATTTCTTCAATACATTTGATAA
CCAATCTCGAATATCAGTCATAGTATTGATGTAGTGTGCGCTTTTGAAGG
TACGTGAATCTTGTTGGACACAGATAACCGGGAAGAACTGCCATCCTGAA
CCAAACTGGTCCCCCAATGTCTCTTCCAACGATGTTCGATATTTGTCAAG
CTGTTCACATGCTCTTAGAAGCGCCTTATCAGTTGATGTTCTTTTAAGTT
CAATACCGATCACCAATTTTCTCGAATGGGACAAGATGAGAAGATCGTAT
TCCCgatgtttcttgttttcaacGTTTGTCATGAATTGTGAAGATTGTAA
AATGACCAGGTCGTTCAAAGTTTCATCCTTAATCGATCGAAGTTGGTCAA
AAAACCAATGCTCAACCTCCTCTCCTAGGTCACTCAATTGTAAATCCCAA
AGCCGTTTGATATTGGAATCCTCACAAACGTTGGATTCGCTCACTAATTT
GTTGACGTCTGCTTTAACTTTATTTCTGCCTCCTTTCCGCGGTAGTTTGA
TGATGCATTGTTGAAGAAATGTCTCTAGATTTGATCCATTCTTCGACTGC
TGTCGTAATTCAATTAAGCTTTTTTGAATAAAGATATCAATATCGATGGT
CATTTGTGGGAGGTTCTGATCGGTCTGAAGCTCCTTGACTACAAGATgct
taattttactttttgtagTCCACTGGTCAAATTCTTTACTGTTAATCTCG
GTCAAAGTAGTGGTACGACTGACAGATTTCTGCATCTGAATGAAAGCATG
AAAGTCAGTTGTAAACCAATGGCTAGGGGAATTCTTCACCATATTTCCCA
AAGTTTTTTCAACATCTTTCACAACATCATAATCCAGAATGGAAACTGAC
GATTCTTTGGtatattgatttgatttgaacACGGGTGGTATGAATAATGC
CTCGTGGTAATTCTGTGAATCGAACAAAAATGATTCGACATATTCCCTTT
CCAAAAGATAGTCAGCTGTGGCAATGGGATCGTTCATTGTTAAACCATTA
CCAAGGTTGTATTTCTTAAACTGATTTTCCTGTCGATCAAAAACACCTTG
ACTGTTCCTGGTATCAGTAATTTGTTGAAATAAAGATTTCTGTTGTGTAC
AGCTGGAATCATCAATAGGTTCAGGCTTCAAAGCCGAAACTTCTGCTGGA
AC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005702-exon-sc0000054-1491911889:602120..603722 | TCONS_00005702-exon-sc0000054-1491911889:602120..603722 | Clytia hemisphaerica | exon |
| TCONS_00005702-exon-sc0000054-1510915933:602120..603722 | TCONS_00005702-exon-sc0000054-1510915933:602120..603722 | Clytia hemisphaerica | exon |
| TCONS_00005702-exon-sc0000054-1575043694:602120..603722 | TCONS_00005702-exon-sc0000054-1575043694:602120..603722 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:602120..603722 . |
Blast
The following BLAST results are available for this feature:
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