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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005689 ID=TCONS_00005689|Name=TCONS_00005689|organism=Clytia hemisphaerica|type=transcript|length=953bp
NCTTAACCGAATTTTGTGAGATCGGTCTAAAGCTATCACATTAGaataga
aatttgaatttcgTCTTCTATTTTAATATAGGTTCAAACGTTGGTTGATA
TGGGATTTGATCGTGATGCAGTGCTGAATGCTTTGGCAAGTACAGAAAAT
GATGTCAACCAAGCCACTGCCATTCTCCTCTCTGCTTCATGATCTCTAAG
CGGTACCCAGTAATTTAGGGTGGAACAGACAGAAGCTGATGTGGAAAACC
ATTCACATAGACACAGCGTGTAACGCTTTGGCTGGGTACAATTTCTCTAC
TATCAAGTTGATCAGCCAGTGAGCAGTCCACAGTGATTGACTGTTCTGGA
AGATCTTTGAGGTTTCCTTTTGCACGCACCGGACAAAATTCAGAATTTTC
CTCGATAAACAAACAAAGTCGAACGTGGATTATTCTGTTGGGAACAGAGA
TTTAAGTTAATTTGATTATTATTTGCTTGCATTTCTTGCCAAAGCGTAGT
GCCTTGTAAAATTGAAATCACATGATTGATATTATGCCTTTGCACACTTT
ATTTGGCAATTTTGAAGCTAATTGGTTTTGTACATTTTtcaagtattaaa
gaatttgTTAAATAGCAATAAACAATCGATAAAATTTCTGGTTGCTGTTG
AAAAAATATTCCCAGGCAATAGATAATTGTGTCAAGGATTATCTTGGTTG
ACTTAGGATGctttttatgggtttttatAATAGATATATTCTGTTATTGA
TTTGTGTATATAATTATTTGGATTATATTTTATAGAACACTTGTAAgaaa
ttgtaaatatttcattctcttttttttgaattcataaaaataccgAAAAC
TTTGATGGATCGGATAAAACTGATTCCATGACAAGACCTAAATGGATAAG
CTTAAATTGATAAACAATTTCCTTATTtctcgaaaaatgtttttccttcc
aag Run BLAST on NCBI transcript from alignment at sc0000054:253922..254874 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005689 ID=TCONS_00005689|Name=TCONS_00005689|organism=Clytia hemisphaerica|type=transcript|length=953bp|location=Sequence derived from alignment at sc0000054:253922..254874 (Clytia hemisphaerica)
cttggaaggaaaaacatttttcgagaAATAAGGAAATTGTTTATCAATTT
AAGCTTATCCATTTAGGTCTTGTCATGGAATCAGTTTTATCCGATCCATC
AAAGTTTTcggtatttttatgaattcaaaaaaaagagaatgaaatattta
caatttcTTACAAGTGTTCTATAAAATATAATCCAAATAATTATATACAC
AAATCAATAACAGAATATATCTATTataaaaacccataaaaagCATCCTA
AGTCAACCAAGATAATCCTTGACACAATTATCTATTGCCTGGGAATATTT
TTTCAACAGCAACCAGAAATTTTATCGATTGTTTATTGCTATTTAAcaaa
ttctttaatacttgaAAAATGTACAAAACCAATTAGCTTCAAAATTGCCA
AATAAAGTGTGCAAAGGCATAATATCAATCATGTGATTTCAATTTTACAA
GGCACTACGCTTTGGCAAGAAATGCAAGCAAATAATAATCAAATTAACTT
AAATCTCTGTTCCCAACAGAATAATCCACGTTCGACTTTGTTTGTTTATC
GAGGAAAATTCTGAATTTTGTCCGGTGCGTGCAAAAGGAAACCTCAAAGA
TCTTCCAGAACAGTCAATCACTGTGGACTGCTCACTGGCTGATCAACTTG
ATAGTAGAGAAATTGTACCCAGCCAAAGCGTTACACGCTGTGTCTATGTG
AATGGTTTTCCACATCAGCTTCTGTCTGTTCCACCCTAAATTACTGGGTA
CCGCTTAGAGATCATGAAGCAGAGAGGAGAATGGCAGTGGCTTGGTTGAC
ATCATTTTCTGTACTTGCCAAAGCATTCAGCACTGCATCACGATCAAATC
CCATATCAACCAACGTTTGAACCTATATTAAAATAGAAGAcgaaattcaa
atttctattCTAATGTGATAGCTTTAGACCGATCTCACAAAATTCGGTTA
AGN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005689-exon-sc0000054-1491911889:253922..254874 | TCONS_00005689-exon-sc0000054-1491911889:253922..254874 | Clytia hemisphaerica | exon |
| TCONS_00005689-exon-sc0000054-1510915933:253922..254874 | TCONS_00005689-exon-sc0000054-1510915933:253922..254874 | Clytia hemisphaerica | exon |
| TCONS_00005689-exon-sc0000054-1575043694:253922..254874 | TCONS_00005689-exon-sc0000054-1575043694:253922..254874 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:253922..254874 . |
Blast
The following BLAST results are available for this feature:
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