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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005685 ID=TCONS_00005685|Name=TCONS_00005685|organism=Clytia hemisphaerica|type=transcript|length=987bp
taaactacatactgatacagtctgctagacattaatatggtaatatttgc
tcttcatctttgattctttctacagtgattagattgacacatgtgcgata
aaatttctattattgttcttcagaggttaatatattctttgaaaacttaa
cctctgatactcagggtaggtaGAGTTGCCAATCTTAAACTATACgattt
tcttcgaaactctcccgccgattttttcctgtataccgccataacgctat
gcataccgccatattttcccgcctttactgtcactgtaacggacgataac
atcgtctatagCTATAATTGATAATACCCACGGTGTATTGTAAAAACAAT
CACGTACACGTGTGATACTTTCGTAACTTCTGGATAATTTTCCAGTCCct
tgtttcgtttttttttattattataccCGCCACCTCGTAAGCCTAGTACT
CCCCCCCCGCCCTGGGTCTAATTTAATAATATAAAGTATAGGTTCCCAAA
TCATATCCGAAAGGGCTAAAGCAATTTTTGGGACTACAGTGGAAAGGGGA
AAACAAAACGGGAAATGGTTGAGAATTCTTGAAATTAAATCAGATTTTTA
ACATATTGTTACAGTATACATACAATTTCAATGACTATATTTCGGTGAAT
AATTTGATCAACTAGTTTCTTGTGGGTAACTTTCTTCCTCCATAGCTCGA
ATTTTGAAAGATCATACGTATTGCTTCATATTGGCCATTATACATTAAAT
ACGCATTTTCGAATGATTTTCTGTGGTGGATAAGGCGTGATACAGAAATA
TAGGTTTGATATgcgggagtttctaaacatcgaccagaaacggtgaccac
gaccggcgaccacgaccagcaaCCAGAtgaatttgggttatcgagttttt
tcccTTTCTCATACGTAAAGTGTCTCTCCTTGTCATTTGAATATATCATA
TTGAATagtaagctcacccctgtctcatcttTTTAGA Run BLAST on NCBI transcript from alignment at sc0000054:103929..104915 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005685 ID=TCONS_00005685|Name=TCONS_00005685|organism=Clytia hemisphaerica|type=transcript|length=987bp|location=Sequence derived from alignment at sc0000054:103929..104915 (Clytia hemisphaerica)
TCTAAAaagatgagacaggggtgagcttactATTCAATATGATATATTCA
AATGACAAGGAGAGACACTTTACGTATGAGAAAgggaaaaaactcgataa
cccaaattcaTCTGGttgctggtcgtggtcgccggtcgtggtcaccgttt
ctggtcgatgtttagaaactcccgcATATCAAACCTATATTTCTGTATCA
CGCCTTATCCACCACAGAAAATCATTCGAAAATGCGTATTTAATGTATAA
TGGCCAATATGAAGCAATACGTATGATCTTTCAAAATTCGAGCTATGGAG
GAAGAAAGTTACCCACAAGAAACTAGTTGATCAAATTATTCACCGAAATA
TAGTCATTGAAATTGTATGTATACTGTAACAATATGTTAAAAATCTGATT
TAATTTCAAGAATTCTCAACCATTTCCCGTTTTGTTTTCCCCTTTCCACT
GTAGTCCCAAAAATTGCTTTAGCCCTTTCGGATATGATTTGGGAACCTAT
ACTTTATATTATTAAATTAGACCCAGGGCGGGGGGGGAGTACTAGGCTTA
CGAGGTGGCGggtataataataaaaaaaaacgaaacaagGGACTGGAAAA
TTATCCAGAAGTTACGAAAGTATCACACGTGTACGTGATTGTTTTTACAA
TACACCGTGGGTATTATCAATTATAGctatagacgatgttatcgtccgtt
acagtgacagtaaaggcgggaaaatatggcggtatgcatagcgttatggc
ggtatacaggaaaaaatcggcgggagagtttcgaagaaaatcGTATAGTT
TAAGATTGGCAACTCtacctaccctgagtatcagaggttaagttttcaaa
gaatatattaacctctgaagaacaataatagaaattttatcgcacatgtg
tcaatctaatcactgtagaaagaatcaaagatgaagagcaaatattacca
tattaatgtctagcagactgtatcagtatgtagttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005685-exon-sc0000054-1491911889:103929..104915 | TCONS_00005685-exon-sc0000054-1491911889:103929..104915 | Clytia hemisphaerica | exon |
| TCONS_00005685-exon-sc0000054-1510915933:103929..104915 | TCONS_00005685-exon-sc0000054-1510915933:103929..104915 | Clytia hemisphaerica | exon |
| TCONS_00005685-exon-sc0000054-1575043694:103929..104915 | TCONS_00005685-exon-sc0000054-1575043694:103929..104915 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:103929..104915 . |
Blast
The following BLAST results are available for this feature:
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