TCONS_00005621 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005621
Unique NameTCONS_00005621
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1054

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005621 ID=TCONS_00005621|Name=TCONS_00005621|organism=Clytia hemisphaerica|type=transcript|length=1054bp
CAAGAAGCCGCTCGAATCCAGTCGTCTTTAACAAGTACGATACTTTGTGC
TTAAATCATGGGAGATATTCCAGTAGGAGACGACTGCATTTGGACATCTT
GGACGAGTTGGTTTATTTTTTACATCTCTCAGCTCAGTCAGGAGGATCTT
CAAGTTTCACAAAGAATAACGATGGCTTCTCAAACTGAAAAGAAGGTTCT
TATTGCAATGGATGAAAGTGAACACAGCAAAAGAGCTTTTGAatATTATT
TGAGGAATATTGCGCAGAAAGATAAAGATGTTTTGATTCTCTTACACATC
TTCaatccaccacctccaccagcTTTGTCTTCTAAAGGCAAAATGTCACA
CATGGGCATGGGGATGCATGGAGCAGAGCACACTCATCCATTTGGTTCTG
ACTTTTTCCTTTCAGatccaAAAAGTGAACATTGGATTGCTTGGAGGAAA
ACAGTGGAAGACAAAGTTCAAGAATTGAAGACATATCTGAGCGTATATGA
AAAGCAATGTGTAGAAAACCAAGTCAAATGCCATTCTATTTTGCATTCTG
GAAATCCTGGTGAAGCTATATGTGAAATCTCTGAAGAACGTGATGTTTCA
TTAGTCATTCTTGGTTCAAGAGGTTTGAATAAATTGCGTAGAACTTTTTT
AGGTTCAGTCAGTGATTACGTCATTCATCACGCCAGGAAACCAGTCATGG
TTGTACCTCCTCAAAAATGATACATAAATGCCCCATAATGAAATGTTTGC
GAGTGATGTGTGAATTTTGTGATGCAGTATTTCATATTAATTTTAGGTTT
AGATCACAATGAGTATAAAATGCACATTCAAATTATTTGTCATTTACTTT
TATAATCATcctgtttttggacctacctggagggcctataaattaacctg
tgttcgttcgttcgttcgttctcaggattgaatcataggaatcttttgaa
tttcggtacaaaggtgcaaaatggtagtggccaaaatgtgaaggatcccg
attttcgaagaaaaaaaattttgggtaaattttcagccaaaaaacggcta
aaaa
Run BLAST on NCBI

protein sequence of TCONS_00005621-protein

>TCONS_00005621-protein ID=TCONS_00005621-protein|Name=TCONS_00005621-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
MGDIPVGDDCIWTSWTSWFIFYISQLSQEDLQVSQRITMASQTEKKVLIA
MDESEHSKRAFEYYLRNIAQKDKDVLILLHIFNPPPPPALSSKGKMSHMG
MGMHGAEHTHPFGSDFFLSDPKSEHWIAWRKTVEDKVQELKTYLSVYEKQ
CVENQVKCHSILHSGNPGEAICEISEERDVSLVILGSRGLNKLRRTFLGS
VSDYVIHHARKPVMVVPPQK
Run BLAST on NCBI

transcript from alignment at sc0000054:210476..223975-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005621 ID=TCONS_00005621|Name=TCONS_00005621|organism=Clytia hemisphaerica|type=transcript|length=13500bp|location=Sequence derived from alignment at sc0000054:210476..223975- (Clytia hemisphaerica)
CAAGAAGCCGCTCGAATCCAGTCGTCTTTAACAAGTACGATACTTTGTGC
TTAAATCATGGGAGATATTCCAGTAGGAGACGACTGCATTTGGACATCTT
GGACGAGTTGGTTTATTTTTTACATCTCTCAGCTCAGTCAGGAGGATCTT
CAAGTTTCACAAAGAATAACGATGGCTTCTCAAACTGAAAAGAAGGTTCT
TATTGCAATGGATGAAAGTGAACACAGCAAAAGAGCTTTTGAATGTAAGA
ACTTTTTTAATTGTTATGTGTCGGTCCAGTTGGCACGCGTCGTCGTCAAC
TTGCATCCAATTCCACTCAGTTCCATGCCATCAATATGCCAAAAATATTT
TGTTCAACCACCTTCACTTCAAGATAGGCCACCATAGAATGAACTTCCTT
TTATCAGTTAGTCGCACTAGGAAATCTAGCTTTCAGAAAAAACAACATCT
ACTACTGTAGGGTGGACAGGCCAAAATTTTCCCCTCAATTTTTAGAAACC
AAACTAATTTTATTTGAAAGTCCTTACCTTTGTGAGAAAAACGAGGGGTC
ATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTTTTTCGAATTTTTCCAAGCTATTTTCCTAACCTTTTTTTGACATTTTT
AGTCAAAATTTTGACACTAAAATTTGAATATCTTTACAACCACTTATCCT
CTGGAGGCAGATGACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGA
TAGGATAGATTTTGAAAAAAAAATTAAAATTTGAAAAATCTTCTGGAGTT
GCTACTAATGAGCTGGAAATGATAGCTTAAAACAAATTTCACCACTAGAA
AGCTGAAACCCTCAGCTTTCAGATGGTGTATGCTGCTTAAAAGAAAAAAT
CCACAATCTTGTTAAAAAATCGCAATTTCTTCTTATTTTTCAAATTCCAG
ACGGCCTGTATATAGATTTTCAAATAAAGCAGGTTGTGATAGATTGTAGC
CTAACCTTACCCTGGGTTTACTAAAAAAACCACGATTGAAAAGATGAACC
AGCTCAATAGCGACAGCCATTTGTTTCGATGTGGGTCGAGAATTTTCCGG
TGCCGTGGTCAGCGCTAAATCGCGTTTTCACCTTGACATCGAAAAACATG
AATATATTTGGAAAGAAAATGGATACCTGGATGCAGTTTTTTTTACTTCT
TTCCCTGATAATTCCTGATTGATTTAAAAAAAGAATGAACAGATTTGGAT
GATTTAAAGGTAAGTACTAATGCATTGAAGCTCATTTTTGTAAATTCTTC
CTCGTTCCGCGCAAAAAATCCCGACGAGTGCGCACCCTACTACTGTAGCA
ACTCCGCCCGGAAGATTTTTCAAGTCTTAATTTTTTTTTCAAAATCTATC
CTATCTTGTAGAGCTTTGAAAGAAAGAAAATGAGGGGTCATAGGCATCCA
GAGGATTAGTGGTTGTAAAGATATTCAAATTTTAGTGTCAAAAATTTGAC
TAAAAATGTCAAAAAAAAGGTTAGACGGTCATCGAAAAATTGTTCTATTT
GCGTCACCTGCCCGCATCAAATTTTCCGCTGATTTTCCCGTGCGGAGATG
TGGAAAAAAATCTGGGAAAAGCAATTTGTTCTTTTAAAGTATAGCTTTTT
TCTCAATTGCTCTGACGAACATCGAAAAATAATTTTGCTCGCGTTACCAC
CCGCCCCTGAGTTACTGACGTGATTAAAAAAAACCCAGGAATGTATTTGA
CCGCCCGTCCGCCCGCATGCATTTTTAACACCCGTTGCGACGCGAACAGA
GCTTTTTTTTGATGACCGCCTTAGGAAAATAGCTTGGAAAAATTCGAAAA
ATGTGTCAAAAAAGAAAAAAAAGAAATTTTCCAGTGTAGTTCTTTTTTTA
GTGTAGCTAGAGACCTCAAAGCGGACCTTATTTTCGGCTCTCGGGGGTAT
TGGCCCTACCGCGTCGCCAAATTTCGACTTGAAAATTTCAATAAGTGTAC
ATGAAAAAACTCAAACGGAAGTCAATGTGGGTTAAGTAAACAAAAACTCT
TAGCGAATGATGATTCAAAGAAGTGCTTAGCTATCAAAAACTTTTTCCGA
CATTTTTCCGACTTGTCCGGCTCGGGATTTATGTTTTGAAGGTGAGTCGG
TCGGGCGACGCGAACGGAACATATTTTAGATTGCCGCCTTTATCAAAATA
ACGAAAGATATGTCTTTTTTTGAAAAAAGAAGACATTGCATTGGTTTATT
TTTGTTTTTCAAGAAAATAGCTTGGAAAAGGTTGAAATGAGTCAAAAAAG
GTGGTAGGACCCATTTTCAAGGGGCCTCTGGAAATGAAGGAACAAAAACT
TATGAGTAAAGAATACTGAAAGGAGAAAACCCAAATGAAAAGAAAATCCA
TTTCGGCAGAAATAAAACTTTTTTTTGGGACATTCCCATGCTAAAGAAGC
AAAAAAGTTTAAAAAACTACATGAAAATGAAAGAACTAGAATTAGCGATT
GTGATTTTTGAATTCCTCACCCTTTTTTCAGCCTCCAAATACATTTTCCT
CCGTTTCCAGACACATTTGTTCTTCGATAGTTGCAAATTTTTTTTCTCCC
GTCGGCAAAAATTTTTAAAATGTTGCAAAACGTTCGGCATTTTACCAATT
TACTGTCTAGCCTGTGTCCACAGTGTTATATACCGCTGGAAAGCTAAGAT
CATGGGCTTTCATTTAGTAAAAACCGGAACGCTTTAGCATACATAGAAAA
ACAGTTCCAAGGGTTCAAAGTTCACGGAAAAATGAAAGGTTTGGTTTGAC
GTCAACGAAAGTTGCATGACTTCTGGAGTCGCTATCTACAGGATACATTT
CAACCACAAGGATGAGAGTTACCTGAATCAAGTTCGCAAGACAATATTAA
TTAAAACTTGAAAGTTGGAAACAAAATAAAACGTGCAGCAGCCAAAATCA
ACCAACCAAAATTTGTCATTCAATTCCCGAGACAGGGCTTTGATTTTTAA
GGCCTTGTTTATACGCTAAAGTAAAAACAATTACACACATGTAAATGGGT
CATTGTTTGAGGTCCGGCAAAATTTCCAGGAGATAGCCTATCCGGCAGTG
CGCGGATCTAGGTGGGTTCCGCCTCCCCCGTAGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCGC
CTCCCCCGTAGATCTTTTTCTTGGTAAGTTGATCTTCAAATTAGTTTTCA
AGGTTGGCTTGGCTCAAATTTTTTCATCTATGGCTCAAATTTCTCAAAAT
TTTTCCGACTCAAAGTGAAACACTTTTTCTTAAAAAATATACGGTTGGTC
GGAGGACACGAACCAAACTAGCCAAAGGCAAAAAAGAGTGGAATTTCCAA
TGCATTTTGCAAAAGTACATGGATTTTTATCGGAATTTCTGACCACCACT
GGAAAAGAAAAATTATTTCCGAGGCTAGAAAAAATTAAAAAATGCACGTT
GTTCGGCAGGGGGTAACAAAAATTCTGGAATGGACCATTGAAGACAAAAA
TTTGCAAAGAAAAATAAACCTTCCCCAAACATTGAAGAAGCCTCTACTAA
TTAAAGTAAATGAGATAAGATAAGATAAAACTTTAAAATCAACCAGAATT
TACAACCTTTCCTCCAAAGCAAAAGATGTGCTTTTCTTGCCCCCATCTTG
TTTTAGAATGAGAATTTTTTTCTGTTCCAGTTCCCACGGTCTTTCATCCA
ATCAGATCGCCTGATTTCACTTTCGCTTTCTCTAGTCCAATAAGACTGCC
AGATTAAAGTCATGTGACATCTCATTATTATTATTAATCATTATTAATTT
ATTTGTTAATGCAGGTCAGGTTCTATATACAAAATTATATACCGGGTGCA
CCAAAAAAAAGTATATAGGTTCGTCGAGATATTGTGAGCTTCAGGATTTA
TAATTTTTGTTCTTTCTTTTTTTATTGTATAGAGCTAGAGAATGCTTTAA
CTTGAATTTTGAGCTATTATACATTAAATTTGAAAAAGTAGTTTGAAAGT
TATTTCCAAAAAACTGACTTTTTTTCCATGTCGAAATTTCAAAAAATCAT
TAAAAACAGCAATCACGCTATAANAACCTAATGTCTGATAGCTCAAAATT
CAAGTTAGAGCATCCTCTATGCGATAAAAAAAGAATGAACAAAAAATTTA
AATCCTGAAGCTCACAATATCACGACAAAGTTGTATACTTTTTTTTGGTG
CACCCGGTACAGTATATTATATACAATATACATTGACAGTAAAAACTGAT
GCGGACCTACAGGCTAAAAAACGAAAAAGTAAAAGCAACCACTGCAAAGA
CAAAGTGTTTTTATACATGCAAAACTTGAGGAGATAGGATAAGGTTTGGT
GTTATTTTCTGTGGGAATTTAAATGATTCAAAAATATAAACTAGGTATGA
CAGTAGGTTTTAATAAATATTATATTAATTATTCTCAACTTCAGTTGAGC
TAGAATCTGAGAATGTCTGTGTGTGTGTGTGTGTGTCTGTCTGTGTGTGT
GTCTGTCACCAAAACTTTGGGGCAAGCTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACTATAATTTTTCTTAAGCCATTAAGTTTACAATTGGGCCTACGAA
TGATTTCAAAGATACTGAAGTTGAGCCAGTGCGGTTAGCACGTTCGACAG
TATAATATATAATAAATAATAAATGTATGAAATAATGTGATATAAGTATT
TAGAGATTAGAATAAGTAATAAATAAGTAGTTCTAGAAATATATGTAGTC
TTCATGTTGGTTGAAGAGCTCTCCCAGTCATATTAAAATTTATTTTGTCA
AGACAGTCAGACTTTTTCAGGGCCTCTTTGAAGGCATCATAAGTATTTTT
CTCCCTGATGGAATTAGGAATATTATTCCACACAATAGCAGCTCTATATT
TGAAAGAGCGTTTATAGTCAACAAAAGTAAAGCGTGCTTGGTTAATTTTA
GATGAGTTTCTGTTACCACGAGCAACTGATTTTGTAATGTGATCTGTTAA
GAGGGGTGAACACAGACCTTGTAGATTTTATACACTTTTCAAGCTATACT
CTTTTTATAGTAGTAAGCAATTCTTTTCCAATTTTGTAGAAGATAAAACA
TAGACATCAGAGACTTCTTCAAACGATTGCTGAAACTAGCTGCTCTGATA
TGGACTTTTTCAATACTGGACAATCTAGGGTGTCTGAACAATTTCCCCAG
ATAAGGATACCGTAAAGAACAGATGGAAGGATACCTTGAAAATAAGTATT
AGAGAGAGTAGATTTTGGCATTCCTCTCATTTGATATAGCTTTTTTAAGT
TTAACAATAAAGCTTTTTGTAACTTTTTGAACATGGACATCCCATTTCAA
TTCATCATCAATTATTACACCCAGCTTTTTGTATAAGTTTGTCACTTCAA
TACTTTTGTTGCAGATTGACAAATTTTGAAGTGGACCGATGAAGCGGTTT
TTGGACATAATCATAACTTTACATATCCCTGGATGAATTGTTAATGAATT
TTTCTTGGCAAAGTGTTCTAATTTATTTGCGTTTTTTTGGATGTTTTTTA
TAACCGTGTCTGTGTCTAAACCCACAGTCATCAGCAAGCTGGTCTAGTTC
GCAAGTAGCACTATCACTCATATCATTGACATTTACTGTGAAGCAGCAGG
GACCAATGAGTTATCCCTGAGGCACACCATATTCAGCCCTCTGAATCCAG
GTCGGCATTCGGCAATTATTTGCCTACGTGATTTACACTCTAGGTCAGCG
TGCCGACAAAAGAAATGTTTTGGGTCGACAAAGCCGACCTAAGGAGGAAA
AATATTATTTGTTAGGTTAATCTAATTGTGTTATCATTTGATAACACATG
ATAATCGAACCTCATTCCATTCTCTTTATAAAACATAAAACTTATTAACA
CAATTATTAAGGATAGTTAAACTAACTGTTAGACTAAATTTATTGTCTTT
GCCGACCTAAACAAGCTACTTAGGACGGCTTTGCCGACCTAAAATGACCT
CTAGGTCGGCAAAATTTTGTTTAGAGTGAGCTCCATTAATGACCGTAAAT
TGTTTGCGGTTGGACAAGTAGCTTGTAAGAAAGTCTCCTGAGACGTCAGA
AGCACTCAACTTTTTCAATAAGATGGGATGTGATACACTGTCGAAAGCTT
TACGAAAATCAATAAAGAGGGTACCAAAGGATTGACGTGAGTAGCTTTTC
TCCATTTCTCTGTCATATATAGAAGTATGTCATCAGTTGATTGTTGTGGT
CTGAATCCCCACTGATGTTCTGATTCAAGATTGTGTTGTCTAAGATGATC
TGTTACCTGAGAGCAGATGAGGTGTTCAACGATTGCTTGGAATTGACAGC
AGAGAGATTGGTCTCTATTGAAAAACCCGCCCGGAATAAAATAGAAATAC
AGGGGCTCACACTACTGGCTACAGACACGAAAGCAAACAATTAAGGCCGA
TATTTTTGTTTTTTCTGAAGGACAAAAGGTATAGGAAGCTTTACTGAAGG
AGGGATGAGGCTGGGACTATCTATTTAAAAGATATGGACAAAAAAAGGCA
CTTTTTTGGGTGATAATTAAGATTTTACTTATAAACTTTAATTCTCTTAC
CCCTGTCGCGGGTGAGGCCCGGAATTCCCGAGTTATTTTTTCCGAGTTAA
AAAAAACGAGTTAAGAAAAAACCAAGTTATCCTGAGTTATGACGTCATTT
TTGGAATTTAGTGACGTCATTTTTCATTTTTTAACTCGGGAATTTTTACA
TCTTTTAACTTTCCGAGTTATTTTCCATTTTTTAACTCGGGAATTTTTGC
TTACTTTAACTTTCCGAGTTATTTTTGAATTTTTAACTCGGGAATTTTTT
CTTCCTTTAACTTTCCGAGTTATTTTTGAATTTTTAACTCGGGAATTTTT
GCTTCCTTTAGCTTTCCGAGTTATTTTTCTTCATAAATAAACACCAGCTT
TAATCTATTGATCCAATACCAACCAAAATCAAAGACATAACCATCCATTA
CCTATTTTTCCCATTACCAACTAGAAAAACCTTAGCCTGCTTTGACTAAA
ATGAATAATCAACAAACAAGTGAATAATTGAAAAACAAGAACTGAAGTTA
AAACCTGCTAGATAAACAAAGTGTAAGCCCTTACAGCATAAATACTGTGT
AAATCTAAAAAAGTACAGCAGGTATGGAGGGATCGTGTAAGACCTGTTCG
GTTCCATAGAAGCCCGGGGGTACTAGGATTGCGAGCTAACGGGTATTTGC
CGCAAAAATCGAGGAAAAAAACTGATTTTTTGGGATTTTGTAACCTTTAT
TGGAACTTTTGGCTGTTTTTACAAGGGACTGAAATTAGATTTTGTGATTT
TTACGACCCTTCGAAGGTCCAAAAAAGGCAGCCTTAAGGGCGGCATACCC
GTACGTGCCATAGTACTCATTCACAAAACTCTTCTTCTAAATATTCCAGC
AAATAGTAAATTTGTGGTGTGCTTGTGGTTTCGATCAATAGATTAAAGCT
GGTGTTTTTTTATGAAGAAAAATAACTCGGAAAGCTAAAGGAAGAAAAAA
TTCCCGAGTTAAAAAATGAAAAATAACTCGGAAAGTTAAAGGAAGCAAAA
ATTCCCGAGAAAAAATGGAAAATGACGTCACTAAACTCCAAAAATGACGT
CATAACTCGGGATAACTCGGTTTTTTGTTAACTTGGTTTTATTAACTAGG
AAAAAATAACTCCGGAATTCCGGGCCTCGTCGCGGGCCCCCCTGATATGA
GCAAGGGAACCATGTTGGCCACCCCTACTGAAAATTTCAGATCATCATCA
TGGAATAAAAAGATATAATAGTCAAATCTTGTAGGGTTATTTTTCAAAAG
AATTTTGCCAAAATCGATTTTCGCATTTCCCTACCCTACGCAAACGCATG
TGGCACGCGCGCGCCGCGATAGCAAAATAACTTCTAGTTGGAGATGCGTT
CGTAGCCCTTAAGGGTACCTTTTTTGGACTTCCAAAGTCCTGCTAAGGGT
CGGAAAAATCAGAAAATCAAATTTCAGTCCCACTAAGGGTCGGAAAAATA
GAAAAAAATTTCAACTTTCTCCCCCCTGAAAGATCGAAATTTGGTCAAAA
TTGGTCAAATTTGTCCTGCTAAGGTTTGTAAAATTCCCAAAATTTCCCTC
TGTTTTCTCCTTTTTAGTCCCGGTAAGAGTCCAAAGTTCGAAAGACGGGC
GGCACCCCCCGCCAGCTTGAAACCCTAGTACCCCGGGGTTCGTAGCCTGA
GCTTAAAGGAATACAACTGCAACTTTCTGCTTTTAGGTGCTTAATATTTG
TTTTTAAGTACGGGTTACACCAGGACATTTTCTGTGTGCGAAGTGAATAT
TGTTTATAGAAGAATCAAAGCAGTCAGTTAAAAAAGAACCGCAGACAGCC
GCAGAGATAGTAGTTAGGTAAACAATTTTTGTTCGGAGGACACAAACCAA
ACTATCAATTGGGCCTGGCCTTAAAGTATTATTTCTTCTCCTCTGAACCT
CTATAGAGCTGCAAAATCTCAATCTTAGTTTTCAAATTCAAAACCTTATG
CCATTTGAAAGCCCTTATCATAAGAGAAGAATGAGGGGTCATTTACCTGG
CAAAAAGTTTTAGCTCTTGAGATAATATCAATTTGAAGTTCCAATTTTAC
AGCTCCTACGGTAACACGACCCCCCAGCTAAATTCCACGATTTTTTGGTA
CTCAGTTTCGATTTTGCTCAACCGAATCTTGGTGTGAAAACCAAAAATTG
GGGTTTTACCTTGCGCAGCCTTGAAAATCAGTCAACCAGCTTCAAACTTT
TGTTTACTACAAATGATGTGAAAAAGATATTGAAAAACGGTTTTCACATT
TAAAAAGAAAAGCTTTTGGCTTTCGAAAACATCCAGGCATAATTAATTAG
TTAATAACCTTTAAAGTTTTAAAGAAAATCTGAAAACAAAGCAAAAATGT
CTCTTTTGACCTGTTTTGACCCGAATCCAGAGGAAAACCCGAGCAAAGTG
TTGATATCGGAAAAGCAGGAATTGCTTGGCGAAAGCATGGTGAACAAATT
ATACTCGTTATTTTTCATTTAGGAGATTTTTAAATGTACATAGACCTGAA
AAAAGAAAGATATCATATCATCATATCATCGTTCACTGCTGGTTGGTGTA
AAAAATTTGCCTATGCTATGAAACAAAAGAAAATAATTTCAGATTTACAA
AATATTGTCTAATCTTCATCTGTCTTCCAGTCGTCAGAAGATATCGACAG
GGAAGACGTTGGTTTGTTCTTTGTCCTAGGTTTTCGAACTAGGCGAAGGT
TTGTTCTAGGGCTTCCTCTTACATGCCAAACGAAGTCACCATTTTCTAAA
TTCATTTTCTTAGCCCTTTGACACATATTTTTAATAACTTTTCTTTCGTT
GATGGTGAAGTCGTCTGTAAGTGTGATGCTAGGGCAAATTTTGTTGAATT
GTTTCAGCTTATGCAGATTTGGCATTATTCGTTCTTTTTCCTCCGTACTT
TTTAATATCAACTTGATTGGACTTGATTGGGGTACCCATTTAATTTACAG
ACCAGAATTGAATAACCAAAAATTTGTGGAGAAGTTATCTGCTAAGCCAG
GGGTTATTAATCTCAAAAATATTCCAATATTTTATGATGCAGAAGAATAC
GTATGATTCAAAGATACGTATTGCCATGTAGTCAAAGCACATGGTGTATG
AAATCTTTGAGCTTTGTGACAGGGTTTGTATATGCATAACATGCAAAATA
TCCATAACATGCAAAATATCAGTAGCAACTTCAGAAATAATAACAATATG
CAGCCTATTGAATTAAGTCATTATTTTATTGTGTACATGATAGATATATA
AAAGGATGAAAGATCAAATGATCAAATTGTAAACTGACAGCTTTTAACAC
CAAATTTAAAGACTTTAGTGAAATAAAAATAAATAAAATAAAAGGAAATG
ATATTTTCGCGACATCCTTAATTTTACCAAACAGAATATATACATTGTTC
TGCGTTTTTCAGAAATTTTATTCTGGTCTGTATTTTTTTGAGTAAGAGAA
GAAGGAAGACAACATGGTGCCTGACCATGATAAAAAAATAGTAGATCTCT
GTACCTTTGGCAAAATGACTATTGCGACTTAATTTTTATGGCAATCTTAA
ATCTGATTTTTGTAAATGATCAATCAAAGGTTTTAGTATCATTTTATCAT
GAACTCAAGCATCAGTTTGTAAAATTTAGGGCAAAATGGGTACCCAAATA
AGTAGCCCAATTGGGAGTACCCTACCTTTAAGGAACACCCAATAAATACC
ACTAAATACCACTAAAATATACAAAATAAGTAAACATAAATTTATCACCT
GCAAGCTTACTGGTGAGTAAAAGATTGCAAAGAATATTTTCGGTCTACCA
AAGTGATCTGGATTCCCTAGCCTACGGGGGCTTACAGCATTTGGGTAAGC
AAGACAAAAGTAAAAAAAGCTGTTTTTTTTTTCAGCTGGTGCTTGAAATA
TTGAAGATTGTTAAGATTTTATTCATTCCTTAAGAATGTGAAACTTCTTA
GTGTGGTCAGTTTAAACTCATTTGCAGAAATAATATACCTAATCAAGTCT
AACAAAAATCCTTTATCCTCAGAAAGAAATGACAGGTGACTTCATGTTCA
TTTGAGAATTCAGACTACTGATGTCTTGAGAGATCAAAACCGGATGATTA
ATTGCAAGTTTATGTAATACTTCTAGTATATAAAAAAAAAACAAAAAAAA
CAAAAAACTTTAACATCTACAATTGAAAGATAATGTCCAACGTCATTCAT
TTCGCTAGGAGATACTCAAAGCACATCTTTTGGAAATGATTTTCCCAGGC
TATAACTTTTTTAAAGTCACATTACCTTGCCCCATGCAACTGGACGAGAA
GATTAAGAAAAATAACTGAAATGCATAACTGTAATTTGCTCAAATTAAGT
TAGTAATCCTATTTCAAAAAGCTTTCAGTCAGTGAAAGAATTTGAAACCC
CCAAATTCTTATTGAGATATTTATGTTGTATACGTTTTTAGATTATTTGA
GGAATATTGCGCAGAAAGATAAAGATGTTTTGATTCTCTTACACATCTTC
AATCCACCACCTCCACCAGCTTTGTCTTCTAAAGGTATGTTTTTAAGGGT
GGACTTTCATTTTGATTTTTTGATGAAAAAGAGTATTTGATGAGACTTTT
TTGTTCGTTCAAAAAACTTATTTTCAACATAAAGATACATATACAGGTAC
ATATCAAAGAGAATTTCTATAAAAAGGTTGAAAATTTTTATAATTCAACA
TTCTCCTACGTTCATTACATGCCTTTTAAAACTTTTATGTCAGGCAAAAT
GTCACACATGGGCATGGGGATGCATGGAGCAGAGCACACTCATCCATTTG
GTTCTGACTTTTTCCTTTCAGGTAGGAAGGTTTTATAATGTTATTCACAT
GGGATCAATGGGAATTGCGTTTCCGATAGCAAAGAGATTAGTTTGAAAAA
TTTTGAAAATAAATCCAGTGTTTTTATATCTATCTTTAAAAGTCAATATT
TTTAAACATTTACAACAATAGGAGAAATGAAATAGATCCCTACTCAGCGT
ATCCCATCCACAATAAGTGTCACTTAACAGGACATAATGTAATTAGTAAG
AAAAAATGAACCTGAAACAGGTTAAGACTGAATTTAAAGATAATATGTAA
TTTTTTCAAAGATCCAAAAAGTGAACATTGGATTGCTTGGAGGAAAACAG
TGGAAGACAAAGTTCAAGAATTGAAGACATATCTGAGCGTATATGAAAAG
CAATGTGTAGAAAACCAAGTCAAATGCCATTCTATTTTGCATTCTGGAAA
TCCTGGTGAAGCTATATGTGAAATCTCTGAAGAACGTGATGTTTCATTAG
TCATTCTTGGTTCAAGAGGTTTGAATAAATTGCGTAGAACTTTTTTAGGT
TCAGTCAGTGATTACGTCATTCATCACGCCAGGAAACCAGTCATGGTTGT
ACCTCCTCAAAAATGATACATAAATGCCCCATAATGAAATGTTTGCGAGT
GATGTGTGAATTTTGTGATGCAGTATTTCATATTAATTTTAGGTTTAGAT
CACAATGAGTATAAAATGCACATTCAAATTATTTGTCATTTACTTTTATA
ATCATCCTGTTTTTGGACCTACCTGGAGGGCCTATAAATTAACCTGTGTT
CGTTCGTTCGTTCGTTCTCAGGATTGAATCATAGGAATCTTTTGAATTTC
GGTACAAAGGTGCAAAATGGTAGTGGCCAAAATGTGAAGGATCCCGATTT
TCGAAGAAAAAAAATTTTGGGTAAATTTTCAGCCAAAAAACGGCTAAAAA

Coding sequence (CDS) from alignment at sc0000054:210476..223975-

>TCONS_00005621 ID=TCONS_00005621|Name=TCONS_00005621|organism=Clytia hemisphaerica|type=CDS|length=2652bp|location=Sequence derived from alignment at sc0000054:210476..223975- (Clytia hemisphaerica)
ATCCAAAAAGTGAACATTGGATTGCTTGGAGGAAAACAGTGGAAGACAAA
GTTCAAGAATTGAAGACATATCTGAGCGTATATGAAAAGCAATGTGTAGA
AAACCAAGTCAAATGCCATTCTATTTTGCATTCTGGAAATCCTGGTGAAG
CTATATGTGAAATCTCTGAAGAACGTGATGTTTCATTAGTCATTCTTGGT
TCAAGAGGTTTGAATAAATTGCGTAGAACTTTTTTAGGTTCAGTCAGTGA
TTACGTCATTCATCACGCCAGGAAACCAGTCATGGTTGTACCTCCTCAAA
AATGAGCAAAATGTCACACATGGGCATGGGGATGCATGGAGCAGAGCACA
CTCATCCATTTGGTTCTGACTTTTTCCTTTCAGATTATTTGAGGAATATT
GCGCAGAAAGATAAAGATGTTTTGATTCTCTTACACATCTTCAATCCACC
ACCTCCACCAGCTTTGTCTTCTAAAGATGGGAGATATTCCAGTAGGAGAC
GACTGCATTTGGACATCTTGGACGAGTTGGTTTATTTTTTACATCTCTCA
GCTCAGTCAGGAGGATCTTCAAGTTTCACAAAGAATAACGATGGCTTCTC
AAACTGAAAAGAAGGTTCTTATTGCAATGGATGAAAGTGAACACAGCAAA
AGAGCTTTTGAATATCCAAAAAGTGAACATTGGATTGCTTGGAGGAAAAC
AGTGGAAGACAAAGTTCAAGAATTGAAGACATATCTGAGCGTATATGAAA
AGCAATGTGTAGAAAACCAAGTCAAATGCCATTCTATTTTGCATTCTGGA
AATCCTGGTGAAGCTATATGTGAAATCTCTGAAGAACGTGATGTTTCATT
AGTCATTCTTGGTTCAAGAGGTTTGAATAAATTGCGTAGAACTTTTTTAG
GTTCAGTCAGTGATTACGTCATTCATCACGCCAGGAAACCAGTCATGGTT
GTACCTCCTCAAAAATGAGCAAAATGTCACACATGGGCATGGGGATGCAT
GGAGCAGAGCACACTCATCCATTTGGTTCTGACTTTTTCCTTTCAGATTA
TTTGAGGAATATTGCGCAGAAAGATAAAGATGTTTTGATTCTCTTACACA
TCTTCAATCCACCACCTCCACCAGCTTTGTCTTCTAAAGATGGGAGATAT
TCCAGTAGGAGACGACTGCATTTGGACATCTTGGACGAGTTGGTTTATTT
TTTACATCTCTCAGCTCAGTCAGGAGGATCTTCAAGTTTCACAAAGAATA
ACGATGGCTTCTCAAACTGAAAAGAAGGTTCTTATTGCAATGGATGAAAG
TGAACACAGCAAAAGAGCTTTTGAATATCCAAAAAGTGAACATTGGATTG
CTTGGAGGAAAACAGTGGAAGACAAAGTTCAAGAATTGAAGACATATCTG
AGCGTATATGAAAAGCAATGTGTAGAAAACCAAGTCAAATGCCATTCTAT
TTTGCATTCTGGAAATCCTGGTGAAGCTATATGTGAAATCTCTGAAGAAC
GTGATGTTTCATTAGTCATTCTTGGTTCAAGAGGTTTGAATAAATTGCGT
AGAACTTTTTTAGGTTCAGTCAGTGATTACGTCATTCATCACGCCAGGAA
ACCAGTCATGGTTGTACCTCCTCAAAAATGAGCAAAATGTCACACATGGG
CATGGGGATGCATGGAGCAGAGCACACTCATCCATTTGGTTCTGACTTTT
TCCTTTCAGATTATTTGAGGAATATTGCGCAGAAAGATAAAGATGTTTTG
ATTCTCTTACACATCTTCAATCCACCACCTCCACCAGCTTTGTCTTCTAA
AGATGGGAGATATTCCAGTAGGAGACGACTGCATTTGGACATCTTGGACG
AGTTGGTTTATTTTTTACATCTCTCAGCTCAGTCAGGAGGATCTTCAAGT
TTCACAAAGAATAACGATGGCTTCTCAAACTGAAAAGAAGGTTCTTATTG
CAATGGATGAAAGTGAACACAGCAAAAGAGCTTTTGAATATCCAAAAAGT
GAACATTGGATTGCTTGGAGGAAAACAGTGGAAGACAAAGTTCAAGAATT
GAAGACATATCTGAGCGTATATGAAAAGCAATGTGTAGAAAACCAAGTCA
AATGCCATTCTATTTTGCATTCTGGAAATCCTGGTGAAGCTATATGTGAA
ATCTCTGAAGAACGTGATGTTTCATTAGTCATTCTTGGTTCAAGAGGTTT
GAATAAATTGCGTAGAACTTTTTTAGGTTCAGTCAGTGATTACGTCATTC
ATCACGCCAGGAAACCAGTCATGGTTGTACCTCCTCAAAAATGAGCAAAA
TGTCACACATGGGCATGGGGATGCATGGAGCAGAGCACACTCATCCATTT
GGTTCTGACTTTTTCCTTTCAGATTATTTGAGGAATATTGCGCAGAAAGA
TAAAGATGTTTTGATTCTCTTACACATCTTCAATCCACCACCTCCACCAG
CTTTGTCTTCTAAAGATGGGAGATATTCCAGTAGGAGACGACTGCATTTG
GACATCTTGGACGAGTTGGTTTATTTTTTACATCTCTCAGCTCAGTCAGG
AGGATCTTCAAGTTTCACAAAGAATAACGATGGCTTCTCAAACTGAAAAG
AAGGTTCTTATTGCAATGGATGAAAGTGAACACAGCAAAAGAGCTTTTGA
AT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003187XLOC_003187Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005621-exon-sc0000054-1575043694:223732..223975TCONS_00005621-exon-sc0000054-1575043694:223732..223975Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1575043694:211692..211784TCONS_00005621-exon-sc0000054-1575043694:211692..211784Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1575043694:211405..211482TCONS_00005621-exon-sc0000054-1575043694:211405..211482Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1575043694:210476..211114TCONS_00005621-exon-sc0000054-1575043694:210476..211114Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1510915933:223732..223975TCONS_00005621-exon-sc0000054-1510915933:223732..223975Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1510915933:211692..211784TCONS_00005621-exon-sc0000054-1510915933:211692..211784Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1510915933:211405..211482TCONS_00005621-exon-sc0000054-1510915933:211405..211482Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1510915933:210476..211114TCONS_00005621-exon-sc0000054-1510915933:210476..211114Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1491911889:223732..223975TCONS_00005621-exon-sc0000054-1491911889:223732..223975Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1491911889:211692..211784TCONS_00005621-exon-sc0000054-1491911889:211692..211784Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1491911889:211405..211482TCONS_00005621-exon-sc0000054-1491911889:211405..211482Clytia hemisphaericaexon
TCONS_00005621-exon-sc0000054-1491911889:210476..211114TCONS_00005621-exon-sc0000054-1491911889:210476..211114Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005621-proteinTCONS_00005621-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:210476..223975 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.8227	63.5579	28.0109	27.4836	17.722	13.1541	42.2382	44.0898	57.9884	54.1513	46.6617	38.3247	24.4701	20.589	16.3194	18.0833	61.331	65.795	21.2446	27.6005	29.8366	31.8964	35.5822	36.9741	22.3784	21.3224	15.7708	13.5255	15.8398	16.3661
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006015Universal_stress_UspA
IPR006016UspA
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005621 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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