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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005562 ID=TCONS_00005562|Name=TCONS_00005562|organism=Clytia hemisphaerica|type=transcript|length=3164bp
GAAATGATGAACATGTATCGAAGCAAAAACATGAGACCTTCAGCTGCGAG
acaCAAAAGTAACGATGATAGATAATATAGCATGAAAATTTCATGGGATG
TATTTCTGGTGTGTCAACTCGTTTTCGTAGCCTATGCTCAATCAAATATC
GTCTTTGTTGGAGTTTTTCCCTTCCACATTAAAAGCAATAACCTGAAACA
GTCATGCAGCAATCAGATCTCATACTCACGCGGTATACAAGCTGTGGAAG
GCATGTTTTATGCTATCGATAAAGTAAACCAAAATGCGAACCTTCTGAAA
AACATCAAATTGAAATGGCTCATCATCGATTCTTGTGATGATGGTACTGT
AGCCTTGGAACGATTCACCCAGAATGCTTTGCAAAAGATTCGAGGCACTT
CTGAAGATAATTGTCCCATACCCTCTTCACACCTTCGTCAAAGTAAATCT
AATGATGTTTACGCTGGTGTGATTGGCGCCGCATCGAGCCCCGTCTCCAT
GGCATTAGCCAATCTCTTACGTTTATTTAAAGTACCTCAAATCAGTTACG
CCTCCACCAGTGACACTCTATGCGATCGCATCAAATATAAATATTTCACG
CGGACAGTCCCGCCGGACACACAACAATTAAAAGCCATGTTAGATTTAGC
GAGGTATCTCGGATGGACGACTTTTAGTATGATTTATTCGGAAGGAAGTT
ACGGTGAGAATGCATTTGAGGCTTTAAAACAAATGGCGGGAAATGGGGAA
TTTTGTTTGATGGACCATTTTAAAGTCAATGCTCACACAAATTATTCAAA
GATTGTTGAAACGTTCCATCTACCAAGATATCGCAACACTCGGTTGGTGA
TATTATTCTGCGCCAAAGATCACATTAAATTGTTCCTCAACCAACTACCA
ATCGATCACGACTTTACAATCCTCGCCAGTGATTCGTGGGGTAACAGACA
GAAGTTTTTAGATACTCACCACTTGAGAGCAGTAGCTAATGGTGCCTTAG
CTTTTCAACTTCGATCGCCTAAGAGAAACCCAGACTTTATACAGTATCta
caaaatttgaattatacGAACAATAAACGCAACAGATGGTATGCACCCTA
TTTGAATGATATTGGATGTGGCAATACTTCTATCAAATGNATAAACGCAA
CAGATGGTATGCACCCTATTTGAATGATATTGGATGTGGCAATACATCTA
TCAAATGCGCTCCGCGTATCATTACGATGGATGATAAAGTGCCTTATGTC
ATGGATGCTGTGTACGCTTTAGCCCACAGTTTAGATGTGATCTACCGTCA
GAGATGCCCCGCACAAATTGGCCTATGTGACGCTATGAGATTGGACGACT
TAAGACCCAGCGTGATGCAGAAACTCTATAATTTGACTTATTATGGAGCT
TTTGGTCGAAGCACCTTGAATGAGAATGGTAGTGCGAATACGGGATATGA
GTTACTCAGACACCAATCCTTATCAAAGCGATATCAAGTGATGGCAGTAT
GGAATGGATCTTTAATGATGGATAATGGTCCTCTAAAGACCATTCCTTAC
AAACCCTCTTCGTGTTTCAGTAAATGTTCAGCCAATGAAATTCAAGTATG
GAAAGCTGGTTTCCCTAAGTGTTGTTTCGACTGCATCAAATGCAAGAACA
ATCAATACAGGCTAGACGAAAGAACATGTGCGAGTTGCGAATTCGATAAC
CAGCGACCAAACGCTACTGGAAACGGTTGCATCGAAATCCCCATCCGTCA
TTTACCGTCTTCATGGGTCATCGTCGTCGCTGTTTTGTCGGCTGTCGGAA
TCTTGATCACTGTCGCCATCATCCTTATCTTTTATTATCATAAAGAGACT
GAAGTCGTTCGAATGTCGGCGCCAGAGTTGAGTTTCCCGTTGTTGATCGG
CGTCATATTGTTATACTCCTTGGTCTTCATGATAATCGCCGATCAGTCGC
CCATCCTATGTGGCGCACGTCGTTTCGGGGTCGGATTTGTCTACTGTATT
TGTTTCAGTGCAATTTTAACCAAAGCCAATCGTTTGGCACgtgttttcaa
tgaaaagaTTGAATCGAAAAGACCACCACGTTTCTTAAGCGCTATTTCAC
AATTGGTCATCATGTCCATCTTAGTGCTGATCGAAGCCACTTTCGCCACC
ATAGCTTTGGTGTACCGACCGCCCGAACTACGATTAGTACATGATACGGA
CAATATATCAGGTGCTTATTTTTGCTACCATCCAAAACTTGACATTATCA
TCGCTATGGGTTACGACCTGTCACTATTACTCATCTGTGCTTACTATGCG
TTTCGTACGCGCAAGATACCGGCAGCATTTAATGAAGCCAAACACTTAGG
AGTGATCACGTATCTacatttcttgatttttatctgttttgcACCTGTTT
ATCTTGTGGAGGTGACTGAAGATGTGAAAACACTTGTCCTGAGCACGTGT
ATCTTCTTGTGTGCCACCAGTATAGTGGTTGTTTTGTTCGGCCCCAAGAT
CTACATCATCATTTTGAGGCCGGCCCGTAACGCAAGGAGCATTTCAGTGA
TGTCATACACGACCAGTCATAGTCACTCAATCGAGTATGATTCCTACCAA
CGCAAAGCCACTATCTGTAGTTCGGTGTCAAGATATTGATTTAATGGCAC
TGTCGAGACACCTGCTCATAAAAATGTTAGTGTTAGTAGATGTGCGATTg
gttatttttatatatttattatCTTGGTGTAGTAATATTCTTTGACTAAA
ATtcgtcataattgtcttttttagaaattatgGCTGATtgtaaaaagttc
ttttttagAACTTTCTTTTTTCATGCGCGAAANATGGCTGATTGTAACCT
TAAAGTTCTTTTTTAGAACTTTCTTTTTTCATGCGCGAAAGACTTTGTGC
TCGAACTTGACACATGATGACACAATCTGATgataagttgtgactgaata
acagtattccaaggcaaacttaaaatccgtaaatataaaaagtctttaaa
gcgccgaaaaagctatattgccattagccgtgtgtcctagccttgtgaat
acgggcttagttaactaagTAGGCtatctacaatcaaggtcataatatat
tgagaattttggctattttaacgtttttcaagatttaaagttctggcgag
aaagtcgatttttg Run BLAST on NCBI transcript from alignment at sc0000054:301928..311552+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005562 ID=TCONS_00005562|Name=TCONS_00005562|organism=Clytia hemisphaerica|type=transcript|length=9625bp|location=Sequence derived from alignment at sc0000054:301928..311552+ (Clytia hemisphaerica)
GAAATGATGAACATGTATCGAAGCAAAAACATGAGACCTTCAGCTGCGAG
GTAAGTAGGTaaacattttggaattattTAGATAATCTTGTTGCTACTCA
TTTATTTAACCAGATGTGAAAGATCCCCGATTTAACAAGAATTTCAAATA
ATTGTTCGAGATTTATATTCTTTACATCAATTTGAGAAATCCTCTATTTC
CCACTTTCCTTCATTGCCAGGGTGCGATGAGCCCATACTAAGTATTGagt
ttaaaattcatttttttgtatGGTTTCAAGTTTATTGATACAATAAGCTA
AAATGATGTTCATCATCAAAAGCAGCTCTTCTTTGCGATCGTTGTGGTGC
CAGTCGATCGACTGGTGGCCCGGATGGACAATCAATGTGCTCAATACTTC
GAATGATGATTGTGTTTGATAACGGAGGGCCACCGTTGCATAAACTACAC
AGCCAACGGATTGGTGTGACGTGAGTCACAACTTCTTCACGAAAAGACTT
CATAAAAAgtgcgatcaaaacattcaaacaaccGCTGAATGAACTCAACA
GTATAGTGATCCTGGTAATCAAAGCATTGGATTGTATATTGTATCCAATA
GCCTCGTTCTGGTGATCTTCCGATGACGTCACGAAACTTTGATAGAATAT
ATAACAGCTGTAAGGCAACGTGGATATTATGAAAATGAGACAGTACACAA
ATACGATATTTCGATTAGTTTGGTTGTAGTTGGCCAAGTCATCGCCATGC
ACAAATGATCCACCGCTTTTACGGCTACGCTTTGGTTTCCTCTTGGACCA
ACCTTGGCATTTTAGATATATGACAGCCACAAAGCACAATATAGCGAACG
CGCCTTCCATCAAAATAGATAGAATGATGGTGGACCATCTGTATCCACCG
GTCAACCGTTGCTGACATTCTCCATTCACCAAGGACAGATCGTATATTCT
TGGTACACATCTCACAATCGCCAGAACGGAAACCACGCCCACTCCTCGCG
TGACTTGCTTCCAACTAAGGTGAGATCCCGTCCACATTCGAGTGCACGTT
TTCTCTATCACCATCACGCTGAGCACGCCGAGTGACACGTAATTGAACAC
ACACCACAAAGAAGGGATCATTTTACATCCACTCATTCCGTACATCCATT
CATTTTCTCCCTGGTGGATTTCCAAGTATATATAGAACGGTGACATGCTG
ATGGTCTTAAGTAGATCTGACACAGCCAGGAATAATAACAATCGCTGGAA
ATTTAAATATCTTTCTCTTGATGCGAAGCCgtggatgaaaatgatcaaag
aGTTTCCAAACACTCCAAAGATGAGAGAAACGGAGAAGAGAGCGATGATT
GTTTCACTCATTGTGAATTACGTCCTTCTGTTTTGACTGCTTAGAATGCT
CAGAGTCTTCTAAAGAGTATATTGGTGGCTACGATAATTTACTTTGAACT
ATTCTGTTCGATGACTTTTGCTCAAATGAGATTTTCCTCataccaatttt
ccaattttaatGCTTCTTCTTCAGTTCTTCCTTTTATCACTTTCTTTTCT
CGACTCAATTTCGTTTCGAAAACTTGTGAGTTGGTTTTCAATATTTACAG
ACCATGATGTGAGGTGTTTGATGGAATGCATTGTTCTAGTGGATACCTTG
GTGATAAAGTTGTCCATAGATTAATTCCAACAAAATCAACATAAACAACC
GTTTGTGccatgatttttcttttttcttattctTCACCGAAGAGAAAATG
ATTGCGTCATACTTTTTCCACACATAGATTGTGAGTTTATTTCAATCATG
TACAAGGAAACAATAGGACTTCCTCATTTTCTCATCCCATGTTATACCTA
CTTATTTTCCATCTTATGCTAGTGCTAGaaggggacaagctggagttttt
acaagctcttatttgatttggttggtcgttaagatgtaataaaagaatct
cattactttttctaaagaacgcgtcatctctatcactttaaatgaccaat
tagtgaagtatcttgtaaaaactccagctcatcccgctAGAAGGGACGCT
TCTTTGGAATGCAAAATGACACAGAGTGAAGATAAAGCATTTAGTTTTGA
ATTTTAGGAAGATTTCTCCTCCACAATTAATTTTGACCGACATTGAGATT
ATTCAAGTTCTCGATTGAATTTGCCATGAATACCTTTTTAACACCTTCAA
ATTTAATcatctttattttgaaagtttaagagtatattattataaatttt
ttcttgatgAGACAAAGACGGTAACACCTTTCTACGCCCAGGATTGACGA
GAAACAAGTTTctcaaaaaagtgtatttttcgTTGTCATTTTGTACAATG
TTAATCAAATTCAATGGGGTGATTTTCGGGAGGGCATATCTCCGGGGTTA
AAATCCGGGgagggcaattttccggggcaCAAATTTTCCGGCGCCAATTT
CCTGTCATCTTAGTTTTGCACCGGAGGTAAGGGAACTCAGAAATAAACAG
GACGACATTTAACTTGAACTCAATGGGAAGCTCTGTTCTTAAGCAACAAA
GGACCCAACAAAAATAGCAGAATACTTTACTTTGAATTTCAAGTGGTCAA
GATTTAAAGTAAAATCTTTCTTTAGTTCGAATCTGtttgtaattcgaata
aaattttGGTACCTTGAAGATCAAAATAGAGAAAGATTTTCAGTCTTTCC
AGTAGGCAGTGAAGACAGCAATTCATTGAAATGAGGAGATTCTATGAGAA
ATAAATAATTAAGGTTGACGTTCAAGGCATGCTAATGATATTAATCTGCA
TTAATGACATGTACAGGTTTCAGAAACCAAGTTTTGATGAGATTGGTGAA
AGAGATAACATCATGTATCATTTTTGTCTCGACATTACTATCATCgacaa
tttttctcaaaatccttCCATCAAATAGAGAAAGCTTTTTGTTTCATGTT
TACTTGAGTTGATTTTACTCCGGGTTTGATTAAATTTAGACAACTTTTAA
ATTCTTGTCACGGATTGCCAATTATTAACATTGTGATGACTTCCACCTTC
TACACTTGCCATTGACTTGTCACTACTTTGTTCAAGTAGGTTTTTTCGGC
TTGTTTGATTTCGCACATAGAATTTACCCAAACTAATTTGATTTCAGCCA
TGCAAGCCAAAACTCAGCTTTCTGTTTATGAATTAGATatgactttcaaa
ccaaaggtTTGTCGTTTTCGATTAGTTTCAGATTATCATACTTTGCACGA
TGACCACACTGATCAAATCCAAAGAAATAAAGAGGGCTGTTTGACGGATT
AAATTAAAACAAAGTGAACGATGCTCTTTTGTGATCCAATAAGAAGGTCC
AGGCTAGAATCTTTCAAATTGGCAATTTTGTATAATGATTTTATTGTTGA
TAAGACCTAAAAATGAGAGCTACATTAAATTTTCGCAATTAGCAACGAAC
AAGGTGCTGTATTTACTGCTTTAtacattttaattattttcgttCTAATC
TGTTTAGCTTTTCTTCCGTACTATAGTTCACCATTAGTTTTTCTGCTGTA
TTTCacttcaaaaactttcaaactaCAAGAAGTAGGATCATGTTTACACA
AGATTATCCTACTCTAGAATTTTAAGCGCTTAGAGAGATGAGATGAACTT
CTAATTCTACTCCTTCATGACTTCATGATTGCATTTCATAGTAAAGAAGG
GTCCAGCTCTAAGATAGACTAGCTATCTTGTACGTACGACTGGCCATGAA
AGAAACATGGTCCAACATGGCAGTTCATTTGATTCACCAGCATACCAAGC
ATTTTTTTGGTCTTGTGCATTTTTAGGGATTTTCAATGTAACGAGTGATT
AATATAGATTATTTTGTGGTTATTGGTCtacttcaaaaagtttgttattg
TACGGATTTTTCCGTCTCCAATTTTGACTTGTTCTTTCACGCTTTTCTAC
TTCATCCATCAGTTTGCAAAGATTTTCTTGTAATGATTAAGAACTATCTC
TTATGTAAAGCAGTTAAGATGGTTTAAATGTTGTACTGGCAAATTTGAAC
TTAAACTGGTTGCTTTCGGTAGAGGTAAATAGTAGATGCTCTTTTTTTCC
CCATCGAAACATGCGTATAACACAAGAATGGAAGATCAATATTTTTCATC
GTATCGAGAGACTACTAGGTTTTTTTGAGAGGGGGCAATTTTCAACACCT
TTTCTTCTAAGTTTTGGGTGTTTTGCCTTTCTTTTCCACCCTAGGTTAAC
CATCGGCTTAATGAAGTCAGATCAAtgatgatacaggggtattttGAATA
AAGTATAAGCTAAAAGGCGCTACGTAAAATTTGAAGTGTTTATTTCTCAT
TAAAGTTGTGCGGGCTGCatgttttcacaaaaaaacactGGTAAGTTTAC
CACCatatttcgaaaaatgtttcaaacGAAAACAAATGAAGTGCTAGAGT
TAACTCGTTTTTCCAAAATGCGGAACTGATCTTTGTATTGAGAGCGTCAT
GGTTATACCTTGTTGACTTTCAATATCAAATTCAGTATCTACAAAAGGTT
TAAAGGGTCAAGGTATTTAGAAAGCGTCGTCCGTTATAGTTATTTTCCCT
TTTCTCTTTTCCAATAAAGGAAAATTTAGTAACGTCAACTTTACTCAGGC
TACCCAGTCTCAGATTCATTAGGTTCCAGACTCCGTCAAATATCGAATTT
TTTTGACCCACGCGGTGTGCTTTCTAGTTTCACTTCttaatttcctaaga
aatgtTATATTGATGTTAAAAGTTAAATTGTTGTGTTGTTTCAACATCAA
ACAAACGACTTGTACAAAAAACACGTCACCGTGTATGTATGAGGGGCCAT
GATAAATACGTATCATCAAACACAAATAAGAAAGTTACTACATGATATGC
GAAAGGAAAATGTTCTCAACGACTGAACAAGGACTCGGATTACTTGATTT
TTTGTTCATGAAAATGTTGTTAAGCGAGTGACGACCTGAAGAGGTAGTGT
ATTTgatgagaaaaacttttttgatgagAATATTTGGGGAGTTATGAAGG
CTTGCTTGTCTACTTTATAAATTGATTTGTCTCTTGGTAGTAGAggattt
tctttcttataactttTAGATATTTTAAACTGTAGGTTTAACGGTGATTA
TATATGTcaatttttctgaaatattttagGAAGGGTTTTGTATAACTTCT
TTTTCTTAAGTTTAGTCAACAAAAAGGCAGTCGGTCTTTTTAAGTCACTA
GTGTGAAATATTTGTGACACAATTCAATGAAATTCATTTCTTATTACGAT
TAAATTTGTATGGTTGAAAATTCCATGATGAGTTGGGATCGGTACTCTTT
CTGTCTAGCACTCAAGTTCATACATATATTTCGggttactttaagggcag
aaagtttcgcgaagtCAAAAAGTCGCGACATTTAGCGAATTTAAGTTTCG
CAAATTATGGTTTAAGCCGAAATTTCGCAGatagaactttcgcgaattca
tataagatttaccttttttggtaacaaaaactcataaaacacgcaaaaat
ttagcaaacagtgcaaaactgagtaggaaagtttatttttcgcgaaaaaa
acttttgcgaaaaaggatcaaaatcgcgaaaaacgcgaaagtttctgccc
acgaaagtttctgcccttaaagtagtaTCAAATTGCTGCCAtttttcatt
aacaattttgaaattctCGTTTTCGAAAATCAAGCTCTTGTTTTTTAATA
TcatagaaaatttattttctcatcaaaaaaattctttctcaaaTATTTGA
GTTGCCATTTCGCCCACACTTAAACTCTGTAAACCTTAtatttttctgtt
tattttatattttgtatctTTTAACTTGTCGAAGTTCATCATATCATTTT
AGATTTCCCGCTTTAAAGGTTTTCTGCGGAAAGCAAACTTGGAGGAGATT
CCTGACTGCTTCGCTTCAAGTAGTCTCATTGCGGATATTGAAATTTGTTC
ACCCAAGTTAACTAATCTTCAACAGGGATACCAACTTCAAATACTGTCTC
TTTCACTAACAGGAAATCTACTTTATTCCGGTTTGATGTTTGTTCTTCGA
GGGTTTTAAAGTACTGAGAAACCTTATTCCGAGAAACGATCGCGCTCCAT
AATGAATCAGATTTCCatacttttttctatttttcagacaCAAAAGTAAC
GATGATAGATAATATAGCATGAAAATTTCATGGGATGTATTTCTGGTGTG
TCAACTCGTTTTCGTAGCCTATGCTCAATCAAATATCGTCTTTGTTGGAG
TTTTTCCCTTCCACATTAAAAGCAATAACCTGAAACAGTCATGCAGCAAT
CAGATCTCATACTCACGCGGTATACAAGCTGTGGAAGGCATGTTTTATGC
TATCGATAAAGTAAACCAAAATGCGAACCTTCTGAAAAACATCAAATTGA
AATGGCTCATCATCGATTCTTGTGATGATGGTACTGTAGCCTTGGAACGA
TTCACCCAGAATGCTTTGCAAAAGATTCGAGGCACTTCTGAAGATAATTG
TCCCATACCCTCTTCACACCTTCGTCAAAGTAAATCTAATGATGTTTACG
CTGGTGTGATTGGCGCCGCATCGAGCCCCGTCTCCATGGCATTAGCCAAT
CTCTTACGTTTATTTAAAGTACCTCAAATCAGTTACGCCTCCACCAGTGA
CACTCTATGCGATCGCATCAAATATAAATATTTCACGCGGACAGTCCCGC
CGGACACACAACAATTAAAAGCCATGTTAGATTTAGCGAGGTATCTCGGA
TGGACGACTTTTAGTATGATTTATTCGGAAGGAAGTTACGGTGAGAATGC
ATTTGAGGCTTTAAAACAAATGGCGGGAAATGGGGAATTTTGTTTGATGG
ACCATTTTAAAGTCAATGCTCACACAAATTATTCAAAGATTGTTGAAACG
TTCCATCTACCAAGATATCGCAACACTCGGTTGGTGATATTATTCTGCGC
CAAAGATCACATTAAATTGTTCCTCAACCAACTACCAATCGATCACGACT
TTACAATCCTCGCCAGTGATTCGTGGGGTAACAGACAGAAGTTTTTAGAT
ACTCACCACTTGAGAGCAGTAGCTAATGGTGCCTTAGCTTTTCAACTTCG
ATCGCCTAAGAGAAACCCAGACTTTATACAGTATCtacaaaatttgaatt
atacGAACAATAAACGCAACAGATGGTATGCACCCTATTTGAATGATATT
GGATGTGGCAATACTTCTATCAAATGNATAAACGCAACAGATGGTATGCA
CCCTATTTGAATGATATTGGATGTGGCAATACATCTATCAAATGCGCTCC
GCGTATCATTACGATGGATGATAAAGTGCCTTATGTCATGGATGCTGTGT
ACGCTTTAGCCCACAGTTTAGATGTGATCTACCGTCAGAGATGCCCCGCA
CAAATTGGCCTATGTGACGCTATGAGATTGGACGACTTAAGACCCAGCGT
GATGCAGAAACTCTATAATTTGACTTATTATGGAGCTTTTGGTCGAAGCA
CCTTGAATGAGAATGGTAGTGCGAATACGGGATATGAGTTACTCAGACAC
CAATCCTTATCAAAGCGATATCAAGTGATGGCAGTATGGAATGGATCTTT
AATGATGGATAATGGTCCTCTAAAGACCATTCCTTACAAACCCTCTTCGT
GTTTCAGTAAATGTTCAGCCAATGAAATTCAAGTATGGAAAGCTGGTTTC
CCTAAGTGTTGTTTCGACTGCATCAAATGCAAGAACAATCAATACAGGCT
AGACGGTAAGTTTcctttttgatggatttttttccGTTTGGAAATGAAGT
TNTTGTGTCAAATGCAAGAACAATCAATACAGGCTCGACggtaagtttct
tttttgatggatttttttccGTTTGGAAATGCGGTTAGAACTGTCGTGAC
TGATAAAAGAAACTCgttgttctttttttctaacTGGCATTTCTTGGCTA
TCTGAGTGGTTTTGTCGCTACTTCTTTAATAAGCGTATTTTTcttctaaa
atagaaaatcttcCAATctgatttccttttttcttaTGATACTTTTGTTT
TTTACCATTACCTTTTCTTCCTTCTGTAGAAAGAACATGTGCGAGTTGCG
AATTCGATAACCAGCGACCAAACGCTACTGGAAACGGTTGCATCGAAATC
CCCATCCGTCATTTACCGTCTTCATGGGTCATCGTCGTCGCTGTTTTGTC
GGCTGTCGGAATCTTGATCACTGTCGCCATCATCCTTATCTTTTATTATC
ATAAAGAGACTGAAGTCGTTCGAATGTCGGCGCCAGAGTTGAGTTTCCCG
TTGTTGATCGGCGTCATATTGTTATACTCCTTGGTCTTCATGATAATCGC
CGATCAGTCGCCCATCCTATGTGGCGCACGTCGTTTCGGGGTCGGATTTG
TCTACTGTATTTGTTTCAGTGCAATTTTAACCAAAGCCAATCGTTTGGCA
CgtgttttcaatgaaaagaTTGAATCGAAAAGACCACCACGTTTCTTAAG
CGCTATTTCACAATTGGTCATCATGTCCATCTTAGTGCTGATCGAAGCCA
CTTTCGCCACCATAGCTTTGGTGTACCGACCGCCCGAACTACGATTAGTA
CATGATACGGACAATATATCAGGTGCTTATTTTTGCTACCATCCAAAACT
TGACATTATCATCGCTATGGGTTACGACCTGTCACTATTACTCATCTGTG
CTTACTATGCGTTTCGTACGCGCAAGATACCGGCAGCATTTAATGAAGCC
AAACACTTAGGAGTGATCACGTATCTacatttcttgatttttatctgttt
tgcACCTGTTTATCTTGTGGAGGTGACTGAAGATGTGAAAACACTTGTCC
TGAGCACGTGTATCTTCTTGTGTGCCACCAGTATAGTGGTTGTTTTGTTC
GGCCCCAAGATCTACATCATCATTTTGAGGCCGGCCCGTAACGCAAGGAG
CATTTCAGTGATGTCATACACGACCAGTCATAGTCACTCAATCGAGTATG
ATTCCTACCAACGCAAAGCCACTATCTGTAGTTCGGTGTCAAGATATTGA
TTTAATGGCACTGTCGAGACACCTGCTCATAAAAATGTTAGTGTTAGTAG
ATGTGCGATTggttatttttatatatttattatCTTGGTGTAGTAATATT
CTTTGACTAAAATtcgtcataattgtcttttttagaaattatgGCTGATt
gtaaaaagttcttttttagAACTTTCTTTTTTCATGCGCGAAANATGGCT
GATTGTAACCTTAAAGTTCTTTTTTAGAACTTTCTTTTTTCATGCGCGAA
AGACTTTGTGCTCGAACTTGACACATGATGACACAATCTGATgataagtt
gtgactgaataacagtattccaaggcaaacttaaaatccgtaaatataaa
aagtctttaaagcgccgaaaaagctatattgccattagccgtgtgtccta
gccttgtgaatacgggcttagttaactaagTAGGCtatctacaatcaagg
tcataatatattgagaattttggctattttaacgtttttcaagatttaaa
gttctggcgagaaagtcgatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005562-exon-sc0000054-1491911889:301928..301977 | TCONS_00005562-exon-sc0000054-1491911889:301928..301977 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1510915933:301928..301977 | TCONS_00005562-exon-sc0000054-1510915933:301928..301977 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1575043694:301928..301977 | TCONS_00005562-exon-sc0000054-1575043694:301928..301977 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1491911889:308115..309732 | TCONS_00005562-exon-sc0000054-1491911889:308115..309732 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1510915933:308115..309732 | TCONS_00005562-exon-sc0000054-1510915933:308115..309732 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1575043694:308115..309732 | TCONS_00005562-exon-sc0000054-1575043694:308115..309732 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1491911889:310057..311552 | TCONS_00005562-exon-sc0000054-1491911889:310057..311552 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1510915933:310057..311552 | TCONS_00005562-exon-sc0000054-1510915933:310057..311552 | Clytia hemisphaerica | exon |
| TCONS_00005562-exon-sc0000054-1575043694:310057..311552 | TCONS_00005562-exon-sc0000054-1575043694:310057..311552 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:301928..311552 + |
Blast
BLAST of TCONS_00005562 vs. Swiss-Prot (Human)
Match: GRM1 (Metabotropic glutamate receptor 1 OS=Homo sapiens GN=GRM1 PE=1 SV=3) HSP 1 Score: 248.44 bits (633), Expect = 5.152e-110 Identity = 167/499 (33.47%), Postives = 266/499 (53.31%), Query Frame = 3
Query: 1119 WQYFYQ-MXKRNRWYAPYLNDIGCGNTSIKCAPRIITMDDKVPYVMDAVYALAHSLDVIYRQRCPAQIGLCDAMRLDDLRPSVMQKLYNLTYYGAFGRST-LNENGSANTGYELLRHQ-SLSKRYQVMAV--WN-GSLMMDNGPLKTIPYK--PSSCFSKCSANEIQVWKAGFPKCCFDCIKCKNNQYRLDERTCASCEFDNQRPNATGNGCIEIPIRHLPSSWV--IVVAVLSAVGILITVAIILIFYYHKETEVVRMSAPELSFPLLIGVILLYSLVFMIIADQSPILCGARRFGVGFVYCICFSAILTKANRLARVF--NEKIESKRPPRFLSAISQLVIMSILVLIEATFATIALVYRPPELRLVHDTDNISGAYF-CYHPKLDIIIAMGYDLSLLLICAYYAFRTRKIPAAFNEAKHLGVITYLHFLIFICFAPVYLVEVTEDVKTLVLSTCIFLCATSIVVVL---FGPKIYIIILRPARNARSISVMSYTTS 2567
WQ+ +Q + P I GN S++ D K+ +V++A+YA+AH L ++ CP +GLCDAM+ D ++ L ++ G G +E G A Y+++ Q + + RY + V W+ G L +D+ ++ S C C +I+V + G CC+ C CK N+Y DE TC +C+ PNA GC IP+R+L S + I+ S +GIL+T+ + LIF +++T VV+ S+ EL + +L G+ L Y F +IA + C +R VG +C+SA++TK NR+AR+ ++K R PRF+SA +Q++I SIL+ ++ T ++ PP L + + I Y C L ++ +GY+ L++ C YYAF+TR +PA FNEAK++ Y +I++ F P+Y +++TC F + S+ V L F PK+YIII +P RN RS ++TTS
Sbjct: 372 WQHRFQCRLPGHLLENPNFKRICTGNESLE---ENYVQDSKMGFVINAIYAMAHGLQNMHHALCPGHVGLCDAMKPID-GSKLLDFLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNIDDYKIQMNKSGVVRSVCSEPCLKGQIKVIRKGEVSCCWICTACKENEYVQDEFTCKACDL-GWWPNADLTGCEPIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPS--IKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYF-----GSNYKIITTC-FAVSLSVTVALGCMFTPKMYIIIAKPERNVRS----AFTTS 853 HSP 2 Score: 170.629 bits (431), Expect = 5.152e-110 Identity = 109/337 (32.34%), Postives = 177/337 (52.52%), Query Frame = 1
Query: 127 VAYAQSNIVFVGVFPFHIK--SNNLKQSCSNQISYSRGIQAVEGMFYAIDKVNQXXXXXXXXXXXXXXXDSCDDGTVALER---FTQNALQKIRGTSE--DNCPIPSSHLRQSKSNDVYAGVIGAASSPVSMALANLLRLFKVPQISYASTSDTLCDRIKYKYFTRTVPPDTQQLKAMLDLARYLGWTTFSMIYSEGSYGENAFEALKQMAGNGEFCLMDHFKV--NAHTNYSKIVETFHLPRYRNTRLVILFCAKDHIKLFLN---QLPIDHDFTILASDSWGNRQKFLDTHHLRAVANGALAFQLRSPKRNPDFIQYLQNLNYTNNKRNRWYAPY 1101
VA +++ +F H + + + + +I GIQ VE MF+ +DK+N + LL NI L I DSC +VALE+ F +++L IR + + C L ++ AGVIG SS V++ + NLL+LF +PQI+Y++TS L D+ YKYF R VP DT Q +AMLD+ + WT S +++EG+YGE+ +A K++A C+ K+ NA + R R+V+ FC ++ L+ +L + +F+++ SD W +R + ++ + + ANG + +L+SP+ F Y L N RN W+ +
Sbjct: 38 VARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVALEQSIEFIRDSLISIRDEKDGINRCLPDGQSLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAFKELAAQEGLCIAHSDKIYSNAGEKSFDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVE--ANGGITIKLQSPEVR-SFDDYFLKLRLDTNTRNPWFPEF 371
The following BLAST results are available for this feature:
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