TCONS_00005559 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00005559
Unique Name	TCONS_00005559
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	985

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000054:301909..316105+
coding sequence from alignment at sc0000054:301909..316105+

transcript sequence

>TCONS_00005559 ID=TCONS_00005559|Name=TCONS_00005559|organism=Clytia hemisphaerica|type=transcript|length=985bp
ACCGATTCTTTGGAAGCCAGAAATGATGAACATGTATCGAAGCAAAAACA
TGAGACCTTCAGCTGCGAGGAGGCCTTATCGTAGGTGATGGTGGAAAGAA
TGTTTTGGAAATTGTTGCTATTGGTCATTTGCTTGACCTGTTGTTATGCT
GAGCAAACAGGTGTGAAGCGTCTGACCATCCCGTCCAAGAACACTCATCC
CACGTGCAAAAAGAATGAAATCTTGCACAGTGACATTATCGAAAACCATT
CTCTCAAACGTGGTCTTACACCAAGCAATTACACTCTCCTCGGTAAAGTA
CCTAACATGGGTGATTGCATGGCATTATGTTGTAGTACAAAGCACTGTAA
CATGGCTTACATGAAGAATAATACGTGTTATGGGGTAACATGTTATGATG
CAGACAAATGTGCAGTGAAGAACGAAACAGCGTCACACGAGAAGGGAACA
CAGTTGGCCTTGCTCATTCGTAATGAAATGAACAGAAGAGTGTATGTGAC
AGCGTACTTGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCATGTCTGGTA
CCATATGGGCTGTCTTCGTCTTCTACAAAAGGTACTCATTACCCATCATC
ACCAAACCGTCCAACCAATCAGATGACGAGGAGAAATGTCAGTTATTATC
TGAACAAGAAAATGAGAAACAATTATTAAAGGATgatcaaaatgaattcc
aagGACCCATGCTTCCTCGGATGCATCAATAATAATCGACGAAGTTATCT
TCAACAATCATCAACaaataaaaatcatttatttttgtaaattttctgat
CCTACTGTACatagatttttctttttatctttttttgtatATATAAAATG
GTGTTTTTATTTCTCCGCTTTGTAATTTGGAGGATGTGATCAATAAAAAT
GTGGAAATCAAATCATACTGCTTCAACTAAGGTGCCCCTAAAGCCTGTTt
gattttattcatttatttccTTATGTCAGGCAAAT

Run BLAST on NCBI

protein sequence of TCONS_00005559-protein

>TCONS_00005559-protein ID=TCONS_00005559-protein|Name=TCONS_00005559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
MVERMFWKLLLLVICLTCCYAEQTGVKRLTIPSKNTHPTCKKNEILHSDI
IENHSLKRGLTPSNYTLLGKVPNMGDCMALCCSTKHCNMAYMKNNTCYGV
TCYDADKCAVKNETASHEKGTQLALLIRNEMNRRVYVTAYLVVVVCAFGA
AMSGTIWAVFVFYKRYSLPIITKPSNQSDDEEKCQLLSEQENEKQLLKDD
QNEFQGPMLPRMHQ

Run BLAST on NCBI

transcript from alignment at sc0000054:301909..316105+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00005559 ID=TCONS_00005559|Name=TCONS_00005559|organism=Clytia hemisphaerica|type=transcript|length=14197bp|location=Sequence derived from alignment at sc0000054:301909..316105+ (Clytia hemisphaerica)
ACCGATTCTTTGGAAGCCAGAAATGATGAACATGTATCGAAGCAAAAACA
TGAGACCTTCAGCTGCGAGGTAAGTAGGTaaacattttggaattattTAG
ATAATCTTGTTGCTACTCATTTATTTAACCAGATGTGAAAGATCCCCGAT
TTAACAAGAATTTCAAATAATTGTTCGAGATTTATATTCTTTACATCAAT
TTGAGAAATCCTCTATTTCCCACTTTCCTTCATTGCCAGGGTGCGATGAG
CCCATACTAAGTATTGagtttaaaattcatttttttgtatGGTTTCAAGT
TTATTGATACAATAAGCTAAAATGATGTTCATCATCAAAAGCAGCTCTTC
TTTGCGATCGTTGTGGTGCCAGTCGATCGACTGGTGGCCCGGATGGACAA
TCAATGTGCTCAATACTTCGAATGATGATTGTGTTTGATAACGGAGGGCC
ACCGTTGCATAAACTACACAGCCAACGGATTGGTGTGACGTGAGTCACAA
CTTCTTCACGAAAAGACTTCATAAAAAgtgcgatcaaaacattcaaacaa
ccGCTGAATGAACTCAACAGTATAGTGATCCTGGTAATCAAAGCATTGGA
TTGTATATTGTATCCAATAGCCTCGTTCTGGTGATCTTCCGATGACGTCA
CGAAACTTTGATAGAATATATAACAGCTGTAAGGCAACGTGGATATTATG
AAAATGAGACAGTACACAAATACGATATTTCGATTAGTTTGGTTGTAGTT
GGCCAAGTCATCGCCATGCACAAATGATCCACCGCTTTTACGGCTACGCT
TTGGTTTCCTCTTGGACCAACCTTGGCATTTTAGATATATGACAGCCACA
AAGCACAATATAGCGAACGCGCCTTCCATCAAAATAGATAGAATGATGGT
GGACCATCTGTATCCACCGGTCAACCGTTGCTGACATTCTCCATTCACCA
AGGACAGATCGTATATTCTTGGTACACATCTCACAATCGCCAGAACGGAA
ACCACGCCCACTCCTCGCGTGACTTGCTTCCAACTAAGGTGAGATCCCGT
CCACATTCGAGTGCACGTTTTCTCTATCACCATCACGCTGAGCACGCCGA
GTGACACGTAATTGAACACACACCACAAAGAAGGGATCATTTTACATCCA
CTCATTCCGTACATCCATTCATTTTCTCCCTGGTGGATTTCCAAGTATAT
ATAGAACGGTGACATGCTGATGGTCTTAAGTAGATCTGACACAGCCAGGA
ATAATAACAATCGCTGGAAATTTAAATATCTTTCTCTTGATGCGAAGCCg
tggatgaaaatgatcaaagaGTTTCCAAACACTCCAAAGATGAGAGAAAC
GGAGAAGAGAGCGATGATTGTTTCACTCATTGTGAATTACGTCCTTCTGT
TTTGACTGCTTAGAATGCTCAGAGTCTTCTAAAGAGTATATTGGTGGCTA
CGATAATTTACTTTGAACTATTCTGTTCGATGACTTTTGCTCAAATGAGA
TTTTCCTCataccaattttccaattttaatGCTTCTTCTTCAGTTCTTCC
TTTTATCACTTTCTTTTCTCGACTCAATTTCGTTTCGAAAACTTGTGAGT
TGGTTTTCAATATTTACAGACCATGATGTGAGGTGTTTGATGGAATGCAT
TGTTCTAGTGGATACCTTGGTGATAAAGTTGTCCATAGATTAATTCCAAC
AAAATCAACATAAACAACCGTTTGTGccatgatttttcttttttcttatt
ctTCACCGAAGAGAAAATGATTGCGTCATACTTTTTCCACACATAGATTG
TGAGTTTATTTCAATCATGTACAAGGAAACAATAGGACTTCCTCATTTTC
TCATCCCATGTTATACCTACTTATTTTCCATCTTATGCTAGTGCTAGaag
gggacaagctggagtttttacaagctcttatttgatttggttggtcgtta
agatgtaataaaagaatctcattactttttctaaagaacgcgtcatctct
atcactttaaatgaccaattagtgaagtatcttgtaaaaactccagctca
tcccgctAGAAGGGACGCTTCTTTGGAATGCAAAATGACACAGAGTGAAG
ATAAAGCATTTAGTTTTGAATTTTAGGAAGATTTCTCCTCCACAATTAAT
TTTGACCGACATTGAGATTATTCAAGTTCTCGATTGAATTTGCCATGAAT
ACCTTTTTAACACCTTCAAATTTAATcatctttattttgaaagtttaaga
gtatattattataaattttttcttgatgAGACAAAGACGGTAACACCTTT
CTACGCCCAGGATTGACGAGAAACAAGTTTctcaaaaaagtgtatttttc
gTTGTCATTTTGTACAATGTTAATCAAATTCAATGGGGTGATTTTCGGGA
GGGCATATCTCCGGGGTTAAAATCCGGGgagggcaattttccggggcaCA
AATTTTCCGGCGCCAATTTCCTGTCATCTTAGTTTTGCACCGGAGGTAAG
GGAACTCAGAAATAAACAGGACGACATTTAACTTGAACTCAATGGGAAGC
TCTGTTCTTAAGCAACAAAGGACCCAACAAAAATAGCAGAATACTTTACT
TTGAATTTCAAGTGGTCAAGATTTAAAGTAAAATCTTTCTTTAGTTCGAA
TCTGtttgtaattcgaataaaattttGGTACCTTGAAGATCAAAATAGAG
AAAGATTTTCAGTCTTTCCAGTAGGCAGTGAAGACAGCAATTCATTGAAA
TGAGGAGATTCTATGAGAAATAAATAATTAAGGTTGACGTTCAAGGCATG
CTAATGATATTAATCTGCATTAATGACATGTACAGGTTTCAGAAACCAAG
TTTTGATGAGATTGGTGAAAGAGATAACATCATGTATCATTTTTGTCTCG
ACATTACTATCATCgacaatttttctcaaaatccttCCATCAAATAGAGA
AAGCTTTTTGTTTCATGTTTACTTGAGTTGATTTTACTCCGGGTTTGATT
AAATTTAGACAACTTTTAAATTCTTGTCACGGATTGCCAATTATTAACAT
TGTGATGACTTCCACCTTCTACACTTGCCATTGACTTGTCACTACTTTGT
TCAAGTAGGTTTTTTCGGCTTGTTTGATTTCGCACATAGAATTTACCCAA
ACTAATTTGATTTCAGCCATGCAAGCCAAAACTCAGCTTTCTGTTTATGA
ATTAGATatgactttcaaaccaaaggtTTGTCGTTTTCGATTAGTTTCAG
ATTATCATACTTTGCACGATGACCACACTGATCAAATCCAAAGAAATAAA
GAGGGCTGTTTGACGGATTAAATTAAAACAAAGTGAACGATGCTCTTTTG
TGATCCAATAAGAAGGTCCAGGCTAGAATCTTTCAAATTGGCAATTTTGT
ATAATGATTTTATTGTTGATAAGACCTAAAAATGAGAGCTACATTAAATT
TTCGCAATTAGCAACGAACAAGGTGCTGTATTTACTGCTTTAtacatttt
aattattttcgttCTAATCTGTTTAGCTTTTCTTCCGTACTATAGTTCAC
CATTAGTTTTTCTGCTGTATTTCacttcaaaaactttcaaactaCAAGAA
GTAGGATCATGTTTACACAAGATTATCCTACTCTAGAATTTTAAGCGCTT
AGAGAGATGAGATGAACTTCTAATTCTACTCCTTCATGACTTCATGATTG
CATTTCATAGTAAAGAAGGGTCCAGCTCTAAGATAGACTAGCTATCTTGT
ACGTACGACTGGCCATGAAAGAAACATGGTCCAACATGGCAGTTCATTTG
ATTCACCAGCATACCAAGCATTTTTTTGGTCTTGTGCATTTTTAGGGATT
TTCAATGTAACGAGTGATTAATATAGATTATTTTGTGGTTATTGGTCtac
ttcaaaaagtttgttattgTACGGATTTTTCCGTCTCCAATTTTGACTTG
TTCTTTCACGCTTTTCTACTTCATCCATCAGTTTGCAAAGATTTTCTTGT
AATGATTAAGAACTATCTCTTATGTAAAGCAGTTAAGATGGTTTAAATGT
TGTACTGGCAAATTTGAACTTAAACTGGTTGCTTTCGGTAGAGGTAAATA
GTAGATGCTCTTTTTTTCCCCATCGAAACATGCGTATAACACAAGAATGG
AAGATCAATATTTTTCATCGTATCGAGAGACTACTAGGTTTTTTTGAGAG
GGGGCAATTTTCAACACCTTTTCTTCTAAGTTTTGGGTGTTTTGCCTTTC
TTTTCCACCCTAGGTTAACCATCGGCTTAATGAAGTCAGATCAAtgatga
tacaggggtattttGAATAAAGTATAAGCTAAAAGGCGCTACGTAAAATT
TGAAGTGTTTATTTCTCATTAAAGTTGTGCGGGCTGCatgttttcacaaa
aaaacactGGTAAGTTTACCACCatatttcgaaaaatgtttcaaacGAAA
ACAAATGAAGTGCTAGAGTTAACTCGTTTTTCCAAAATGCGGAACTGATC
TTTGTATTGAGAGCGTCATGGTTATACCTTGTTGACTTTCAATATCAAAT
TCAGTATCTACAAAAGGTTTAAAGGGTCAAGGTATTTAGAAAGCGTCGTC
CGTTATAGTTATTTTCCCTTTTCTCTTTTCCAATAAAGGAAAATTTAGTA
ACGTCAACTTTACTCAGGCTACCCAGTCTCAGATTCATTAGGTTCCAGAC
TCCGTCAAATATCGAATTTTTTTGACCCACGCGGTGTGCTTTCTAGTTTC
ACTTCttaatttcctaagaaatgtTATATTGATGTTAAAAGTTAAATTGT
TGTGTTGTTTCAACATCAAACAAACGACTTGTACAAAAAACACGTCACCG
TGTATGTATGAGGGGCCATGATAAATACGTATCATCAAACACAAATAAGA
AAGTTACTACATGATATGCGAAAGGAAAATGTTCTCAACGACTGAACAAG
GACTCGGATTACTTGATTTTTTGTTCATGAAAATGTTGTTAAGCGAGTGA
CGACCTGAAGAGGTAGTGTATTTgatgagaaaaacttttttgatgagAAT
ATTTGGGGAGTTATGAAGGCTTGCTTGTCTACTTTATAAATTGATTTGTC
TCTTGGTAGTAGAggattttctttcttataactttTAGATATTTTAAACT
GTAGGTTTAACGGTGATTATATATGTcaatttttctgaaatattttagGA
AGGGTTTTGTATAACTTCTTTTTCTTAAGTTTAGTCAACAAAAAGGCAGT
CGGTCTTTTTAAGTCACTAGTGTGAAATATTTGTGACACAATTCAATGAA
ATTCATTTCTTATTACGATTAAATTTGTATGGTTGAAAATTCCATGATGA
GTTGGGATCGGTACTCTTTCTGTCTAGCACTCAAGTTCATACATATATTT
CGggttactttaagggcagaaagtttcgcgaagtCAAAAAGTCGCGACAT
TTAGCGAATTTAAGTTTCGCAAATTATGGTTTAAGCCGAAATTTCGCAGa
tagaactttcgcgaattcatataagatttaccttttttggtaacaaaaac
tcataaaacacgcaaaaatttagcaaacagtgcaaaactgagtaggaaag
tttatttttcgcgaaaaaaacttttgcgaaaaaggatcaaaatcgcgaaa
aacgcgaaagtttctgcccacgaaagtttctgcccttaaagtagtaTCAA
ATTGCTGCCAtttttcattaacaattttgaaattctCGTTTTCGAAAATC
AAGCTCTTGTTTTTTAATATcatagaaaatttattttctcatcaaaaaaa
ttctttctcaaaTATTTGAGTTGCCATTTCGCCCACACTTAAACTCTGTA
AACCTTAtatttttctgtttattttatattttgtatctTTTAACTTGTCG
AAGTTCATCATATCATTTTAGATTTCCCGCTTTAAAGGTTTTCTGCGGAA
AGCAAACTTGGAGGAGATTCCTGACTGCTTCGCTTCAAGTAGTCTCATTG
CGGATATTGAAATTTGTTCACCCAAGTTAACTAATCTTCAACAGGGATAC
CAACTTCAAATACTGTCTCTTTCACTAACAGGAAATCTACTTTATTCCGG
TTTGATGTTTGTTCTTCGAGGGTTTTAAAGTACTGAGAAACCTTATTCCG
AGAAACGATCGCGCTCCATAATGAATCAGATTTCCatacttttttctatt
tttcagacaCAAAAGTAACGATGATAGATAATATAGCATGAAAATTTCAT
GGGATGTATTTCTGGTGTGTCAACTCGTTTTCGTAGCCTATGCTCAATCA
AATATCGTCTTTGTTGGAGTTTTTCCCTTCCACATTAAAAGCAATAACCT
GAAACAGTCATGCAGCAATCAGATCTCATACTCACGCGGTATACAAGCTG
TGGAAGGCATGTTTTATGCTATCGATAAAGTAAACCAAAATGCGAACCTT
CTGAAAAACATCAAATTGAAATGGCTCATCATCGATTCTTGTGATGATGG
TACTGTAGCCTTGGAACGATTCACCCAGAATGCTTTGCAAAAGATTCGAG
GCACTTCTGAAGATAATTGTCCCATACCCTCTTCACACCTTCGTCAAAGT
AAATCTAATGATGTTTACGCTGGTGTGATTGGCGCCGCATCGAGCCCCGT
CTCCATGGCATTAGCCAATCTCTTACGTTTATTTAAAGTACCTCAAATCA
GTTACGCCTCCACCAGTGACACTCTATGCGATCGCATCAAATATAAATAT
TTCACGCGGACAGTCCCGCCGGACACACAACAATTAAAAGCCATGTTAGA
TTTAGCGAGGTATCTCGGATGGACGACTTTTAGTATGATTTATTCGGAAG
GAAGTTACGGTGAGAATGCATTTGAGGCTTTAAAACAAATGGCGGGAAAT
GGGGAATTTTGTTTGATGGACCATTTTAAAGTCAATGCTCACACAAATTA
TTCAAAGATTGTTGAAACGTTCCATCTACCAAGATATCGCAACACTCGGT
TGGTGATATTATTCTGCGCCAAAGATCACATTAAATTGTTCCTCAACCAA
CTACCAATCGATCACGACTTTACAATCCTCGCCAGTGATTCGTGGGGTAA
CAGACAGAAGTTTTTAGATACTCACCACTTGAGAGCAGTAGCTAATGGTG
CCTTAGCTTTTCAACTTCGATCGCCTAAGAGAAACCCAGACTTTATACAG
TATCtacaaaatttgaattatacGAACAATAAACGCAACAGATGGTATGC
ACCCTATTTGAATGATATTGGATGTGGCAATACTTCTATCAAATGNATAA
ACGCAACAGATGGTATGCACCCTATTTGAATGATATTGGATGTGGCAATA
CATCTATCAAATGCGCTCCGCGTATCATTACGATGGATGATAAAGTGCCT
TATGTCATGGATGCTGTGTACGCTTTAGCCCACAGTTTAGATGTGATCTA
CCGTCAGAGATGCCCCGCACAAATTGGCCTATGTGACGCTATGAGATTGG
ACGACTTAAGACCCAGCGTGATGCAGAAACTCTATAATTTGACTTATTAT
GGAGCTTTTGGTCGAAGCACCTTGAATGAGAATGGTAGTGCGAATACGGG
ATATGAGTTACTCAGACACCAATCCTTATCAAAGCGATATCAAGTGATGG
CAGTATGGAATGGATCTTTAATGATGGATAATGGTCCTCTAAAGACCATT
CCTTACAAACCCTCTTCGTGTTTCAGTAAATGTTCAGCCAATGAAATTCA
AGTATGGAAAGCTGGTTTCCCTAAGTGTTGTTTCGACTGCATCAAATGCA
AGAACAATCAATACAGGCTAGACGGTAAGTTTcctttttgatggattttt
ttccGTTTGGAAATGAAGTTNTTGTGTCAAATGCAAGAACAATCAATACA
GGCTCGACggtaagtttcttttttgatggatttttttccGTTTGGAAATG
CGGTTAGAACTGTCGTGACTGATAAAAGAAACTCgttgttctttttttct
aacTGGCATTTCTTGGCTATCTGAGTGGTTTTGTCGCTACTTCTTTAATA
AGCGTATTTTTcttctaaaatagaaaatcttcCAATctgatttccttttt
tcttaTGATACTTTTGTTTTTTACCATTACCTTTTCTTCCTTCTGTAGAA
AGAACATGTGCGAGTTGCGAATTCGATAACCAGCGACCAAACGCTACTGG
AAACGGTTGCATCGAAATCCCCATCCGTCATTTACCGTCTTCATGGGTCA
TCGTCGTCGCTGTTTTGTCGGCTGTCGGAATCTTGATCACTGTCGCCATC
ATCCTTATCTTTTATTATCATAAAGAGACTGAAGTCGTTCGAATGTCGGC
GCCAGAGTTGAGTTTCCCGTTGTTGATCGGCGTCATATTGTTATACTCCT
TGGTCTTCATGATAATCGCCGATCAGTCGCCCATCCTATGTGGCGCACGT
CGTTTCGGGGTCGGATTTGTCTACTGTATTTGTTTCAGTGCAATTTTAAC
CAAAGCCAATCGTTTGGCACgtgttttcaatgaaaagaTTGAATCGAAAA
GACCACCACGTTTCTTAAGCGCTATTTCACAATTGGTCATCATGTCCATC
TTAGTGCTGATCGAAGCCACTTTCGCCACCATAGCTTTGGTGTACCGACC
GCCCGAACTACGATTAGTACATGATACGGACAATATATCAGGTGCTTATT
TTTGCTACCATCCAAAACTTGACATTATCATCGCTATGGGTTACGACCTG
TCACTATTACTCATCTGTGCTTACTATGCGTTTCGTACGCGCAAGATACC
GGCAGCATTTAATGAAGCCAAACACTTAGGAGTGATCACGTATCTacatt
tcttgatttttatctgttttgcACCTGTTTATCTTGTGGAGGTGACTGAA
GATGTGAAAACACTTGTCCTGAGCACGTGTATCTTCTTGTGTGCCACCAG
TATAGTGGTTGTTTTGTTCGGCCCCAAGATCTACATCATCATTTTGAGGC
CGGCCCGTAACGCAAGGAGCATTTCAGTGATGTCATACACGACCAGTCAT
AGTCACTCAATCGAGTATGATTCCTACCAACGCAAAGCCACTATCTGTAG
TTCGGTGTCAAGATATTGATTTAATGGCACTGTCGAGACACCTGCTCATA
AAAATGTTAGTGTTAGTAGATGTGCGATTggttatttttatatatttatt
atCTTGGTGTAGTAATATTCTTTGACTAAAATtcgtcataattgtctttt
ttagaaattatgGCTGATtgtaaaaagttcttttttagAACTTTCTTTTT
TCATGCGCGAAANATGGCTGATTGTAACCTTAAAGTTCTTTTTTAGAACT
TTCTTTTTTCATGCGCGAAAGACTTTGTGCTCGAACTTGACACATGATGA
CACAATCTGATgataagttgtgactgaataacagtattccaaggcaaact
taaaatccgtaaatataaaaagtctttaaagcgccgaaaaagctatattg
ccattagccgtgtgtcctagccttgtgaatacgggcttagttaactaagT
AGGCtatctacaatcaaggtcataatatattgagaattttggctatttta
acgtttttcaagatttaaagttctggcgagaaagtcgatttttggctatc
tttttaatttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNtaaaactcagagttaaaactctaccctt
ccaacctactttagagcacttacaaatcgattgtggttcaaaaacttccc
ggtggatttcccttttttctcaaatatgatgaccttgattgtacagAGCT
GCAAATAGTATAAAGCCTATAAAAGGAGCATCAGTTAGTGGATGTCAACA
GCATACCAAGAACCACCTTCGGTTACCAACTACAATCATGAACAGAAATG
TTTGAGAAAACACTAAAGGTTACttcagaaatttagaaaaaagatCCCCT
GTACTAGGTTTGAGAGGTGACGGATATGTCCGAGACAAAGTTCAAagatc
gacccttagagagactgaatttcgaaaaatttcaaatttagtccaaattt
caagaatctAATTACCCTTTGAGAgggttaatttttgattttggtaattt
tggaacccttacagagactaatttgctttttaatggctTTTGTACCCCTT
TCGAGAATGTGAACCCGGCATCTATTCTGCCTAAGTACTCAACTCAACTC
TCAACTGCAATGTTCAGTGTACACGGGTGCCCCACCGTTCATTCAACATT
GTAAATGGGGAGAGGGGGaatgtttttttcataattttgtccatgattgt
acttGATATAGCCTATCAANAATGGGGAGAGGGGGaatgttttttcataa
ttttgtccatgattgtacttGATATAGCCTATCAATTTTATAATTCCAAT
CTTGTATTTGACGATAATTGCTTTATAAAAGTAAATAGTAATTCTTTTCA
TTGTACATATTACATCTTGTGTTTatagattttaaaaacatttttatata
aaataccTATATTGTTCATAATGATCTTTCTCCAGTGGTTTTTGCTCAAG
TGTATTGATTGTTCAAAAGAATTACACGATTGCTGTACAGCGCAAGGAAA
CGTTGTTGAGATAATTTAGTGAACTCATTCGaattattttcgaattcttT
TTCCAATCGAGCCTTGCACACATTTTGTGCATGAAACATTATAAACaaga
tatttcaattcaaaAGGGAATTCTCTTCTTAACTTTTAGCTTAAACGTTT
CAACCGGGCCCAAACAATCAATTTGAGACCTCTCATATTCAGATTGATTT
TAGTCGTAAAGAAATTATCTACTCAGTGAAACTtgtaaaaattgattaat
tacATTTCATTAATGACTTAATTGTTGTATGCGAGATTTGCTTTTCGTTC
attaaacaaaaactttttactcACTTTCAGCATACTACATGCTCATTTCA
AATTTGTGCAGCTTTTGCAGAAGAAGAACTATTTTTCGGTTGAAATTTTC
CACTGTTTTTTTTACAGGAGGCCTTATCGTAGGTGATGGTGGAAAGAATG
TTTTGGAAATTGTTGCTATTGGTCATTTGCTTGACCTGTTGTTATGCTGA
GCAAAGTGAGTCAGATTTTATTTGAAGTTTCAGATCACATGGCAATAAAA
ATAATATTCCGGCAAATCGTTTGGCAAAATTATAGATTGATTCTGAATTC
TAATATTGTGACTTATTTGTCCATTTGTTTGTAACTTGTTCAGCTATGTC
AATGGATATTTCACTTCGGCCATTCCGAGGAACGTCAAATTTTATCAATA
TCTAAGCCGGACTAAACTGAGCTGCATGAGGTGCGATTCAAACAAGATGA
TGTCTTCTAGAATGGCTGTTGTATATAATAACAGTAAAACGTTTAAAGGT
TTCCATTGAACGACTGTTTGTTTCCATTTCAGCAGGTGTGAAGCGTCTGA
CCATCCCGTCCAAGAACACTCATCCCACGTGCAAAAAGAATGAAATCTTG
CACAGTGACATTATCGAAAACCATTCTCTCAAACGTGGTCTTACACCAAG
CAATTACACTCTCCTCGGTAAAGTACCTAACATGGGTGATTGCATGGCAT
TATGTTGTAGTACAAAGCACTGTAACATGGCTTACATGAAGAATAATACG
TGTTATGGGGTAACATGTTATGATGCAGACAAATGTGCAGTGAAGAACGA
AACAGCGTCACACGAGAAGGGAACACAGTTGGCCTTGCTCATTCGTAATG
AAATGAACAGAAGAGGTATAATACTCTtcgttttttttgttattattctG
ACGATGCGTATATACACTGGGATCTCTCATATAGTAACTCCCATTAGTCT
ACAGTCAAATGAGACCGAGGTACACCGCCCAAATTAGCCTTTCCTCGCAG
ATTTCGGGGTGTTTGCCAGGGCACACCAAATCCCCTTATTGGACAACCAG
ATCATATACACAGAGAAAAGACAAAAACCCCATTGCGACTTTTATGGGTG
AAAAGTTGCAATTTATGGACAAGAACTTCAGCTTTTAAACGTAAATTATT
GAAATATTACGGATTTTGACTTCTCCTTACAGTGTATGTGACAGCGTACT
TGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCATGTCTGGTACCATATGG
GCTGTCTTCGTCTTCTACAAAAGGTAAGAAAACTCTTACAACTAATTTTC
ACCCGATAAAGCAATCACAAAATCCTAAGTATGACCTACTTGGGATGGTA
AAAGCTATAGCACCCCGGCTAAAATGAACTTGTTacatattttcttttca
aaaatttggcaaaatatAGATGGCTATGTAGAGCTTTCGAAAAACTGGTC
Taaatatatagtctagaagtataaaaccttcaactactcaaaatgaaaac
actaaagacaaaacccacaaaacaaaaaaagacaatacaaattacaacaa
aaatctagaatggaCATTCACAGAAAATTAATGAGGTTGGAGTTGAAgag
gaaaatatgatgacatgGAAATCCGTCAATGCAAAACCAGTGATCTAAAA
TGAATATAAGGAAGAATgcaactcaatatgagttaaagtggaaagaagta
actcaatatgagtcaaaagatatttcaagaaaacacatgATCTgctcctc
agttttcgacctacacaggatttcggccatttgtgaaaatattcTCCCAT
ATGATGGAAATAAagttgtgtaggtaggccaagcagtgttaattagacac
caccacagataaaagattgtaaaagatgtgtttagtgaaagtataaaacg
cgcgcaataatataaaataaactaaaacatAAAATCCGcggaaccagccg
aagaaactaaaataacagtgagaaaagaagtatactttTTGATAGACAAA
GTTGCCGCACCTTTGACCcgtttctgccacaacgttgTAGAAAGTATACT
AGAGGGAaaggaactgggattggatcgccactatccaaccctgtggctct
cacacTCATTTTACGGTTCAAGAAtaagatggaaagagtgggaaagaatg
gaaatttaaaaaaatcggactagaacccggttcgaagccccgtacacccg
tgaccgctcaccgcaaGAGCTGGTGAACGAATGAATCTTGAGAgagttga
aatcttgaaaattctaaaaaatgacGAACTATAACACACGTCAGCGTact
tttgaagttttacagTAACACAATGACACAATTAATGGCCAAAACATTTC
GCAGTCTAAAGTAATTTATGGAACATGATATTTATCTTAAAATACAAATC
TTTATAACACAACGACTTTTGTTTTGACAGGTACTCATTACCCATCATCA
CCAAACCGTCCAACCAATCAGATGACGAGGAGAAATGTCAGTTATTATCT
GAACAAGAAAATGAGAAACAATTATTAAAGGATgatcaaaatgaattcca
agGACCCATGCTTCCTGTAAGATACACTTACCAGATAGTTTTTTAGTAAA
TTCTCTACAAATCTAAACCTACCGCTTTTTGATGTCGATCCGACggtttt
gaatttctttctatTTTGCTGTGTTTGAGGAAAAAGTGGAAAATCTATCT
TTGGTTAAGCTTGACCATCATTGTGACATATTATCTCTCCATTTAACCTC
GTTGACCTTCACGAAATTTTCTCTTTTAGCGGATGCATCAATAATAATCG
ACGAAGTTATCTTCAACAATCATCAACaaataaaaatcatttatttttgt
aaattttctgatCCTACTGTACatagatttttctttttatctttttttgt
atATATAAAATGGTGTTTTTATTTCTCCGCTTTGTAATTTGGAGGATGTG
ATCAATAAAAATGTGGAAATCAAATCATACTGCTTCAACTAAGGTGCCCC
TAAAGCCTGTTtgattttattcatttatttccTTATGTCAGGCAAAT

Coding sequence (CDS) from alignment at sc0000054:301909..316105+

>TCONS_00005559 ID=TCONS_00005559|Name=TCONS_00005559|organism=Clytia hemisphaerica|type=CDS|length=3225bp|location=Sequence derived from alignment at sc0000054:301909..316105+ (Clytia hemisphaerica)
ATGGTGGAAAGAATGTTTTGGAAATTGTTGCTATTGGTCATTTGCTTGAC
CTGTTGTTATGCTGAGCAAACAGGTGTGAAGCGTCTGACCATCCCGTCCA
AGAACACTCATCCCACGTGCAAAAAGAATGAAATCTTGCACAGTGACATT
ATCGAAAACCATTCTCTCAAACGTGGTCTTACACCAAGCAATTACACTCT
CCTCGGTAAAGTACCTAACATGGGTGATTGCATGGCATTATGTTGTAGTA
CAAAGCACTGTAACATGGCTTACATGAAGAATAATACGTGTTATGGGGTA
ACATGTTATGATGCAGACAAATGTGCAGTGAAGAACGAAACAGCGTCACA
CGAGAAGGGAACACAGTTGGCCTTGCTCATTCGTAATGAAATGAACAGAA
GAGTGTATGTGACAGCGTACTTGGTGGTGGTGGTTTGTGCGTTCGGTGCT
GCCATGTCTGGTACCATATGGGCTGTCTTCGTCTTCTACAAAAGGTACTC
ATTACCCATCATCACCAAACCGTCCAACCAATCAGATGACGAGGAGAAAT
GTCAGTTATTATCTGAACAAGAAAATGAGAAACAATTATTAAAGGATgat
caaaatgaattccaagGACCCATGCTTCCTCGGATGCATCAATAAATGGT
GGAAAGAATGTTTTGGAAATTGTTGCTATTGGTCATTTGCTTGACCTGTT
GTTATGCTGAGCAAACAGGTGTGAAGCGTCTGACCATCCCGTCCAAGAAC
ACTCATCCCACGTGCAAAAAGAATGAAATCTTGCACAGTGACATTATCGA
AAACCATTCTCTCAAACGTGGTCTTACACCAAGCAATTACACTCTCCTCG
GTAAAGTACCTAACATGGGTGATTGCATGGCATTATGTTGTAGTACAAAG
CACTGTAACATGGCTTACATGAAGAATAATACGTGTTATGGGGTAACATG
TTATGATGCAGACAAATGTGCAGTGAAGAACGAAACAGCGTCACACGAGA
AGGGAACACAGTTGGCCTTGCTCATTCGTAATGAAATGAACAGAAGAGTG
TATGTGACAGCGTACTTGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCAT
GTCTGGTACCATATGGGCTGTCTTCGTCTTCTACAAAAGGTACTCATTAC
CCATCATCACCAAACCGTCCAACCAATCAGATGACGAGGAGAAATGTCAG
TTATTATCTGAACAAGAAAATGAGAAACAATTATTAAAGGATgatcaaaa
tgaattccaagGACCCATGCTTCCTCGGATGCATCAATAAATGGTGGAAA
GAATGTTTTGGAAATTGTTGCTATTGGTCATTTGCTTGACCTGTTGTTAT
GCTGAGCAAACAGGTGTGAAGCGTCTGACCATCCCGTCCAAGAACACTCA
TCCCACGTGCAAAAAGAATGAAATCTTGCACAGTGACATTATCGAAAACC
ATTCTCTCAAACGTGGTCTTACACCAAGCAATTACACTCTCCTCGGTAAA
GTACCTAACATGGGTGATTGCATGGCATTATGTTGTAGTACAAAGCACTG
TAACATGGCTTACATGAAGAATAATACGTGTTATGGGGTAACATGTTATG
ATGCAGACAAATGTGCAGTGAAGAACGAAACAGCGTCACACGAGAAGGGA
ACACAGTTGGCCTTGCTCATTCGTAATGAAATGAACAGAAGAGTGTATGT
GACAGCGTACTTGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCATGTCTG
GTACCATATGGGCTGTCTTCGTCTTCTACAAAAGGTACTCATTACCCATC
ATCACCAAACCGTCCAACCAATCAGATGACGAGGAGAAATGTCAGTTATT
ATCTGAACAAGAAAATGAGAAACAATTATTAAAGGATgatcaaaatgaat
tccaagGACCCATGCTTCCTCGGATGCATCAATAAATGGTGGAAAGAATG
TTTTGGAAATTGTTGCTATTGGTCATTTGCTTGACCTGTTGTTATGCTGA
GCAAACAGGTGTGAAGCGTCTGACCATCCCGTCCAAGAACACTCATCCCA
CGTGCAAAAAGAATGAAATCTTGCACAGTGACATTATCGAAAACCATTCT
CTCAAACGTGGTCTTACACCAAGCAATTACACTCTCCTCGGTAAAGTACC
TAACATGGGTGATTGCATGGCATTATGTTGTAGTACAAAGCACTGTAACA
TGGCTTACATGAAGAATAATACGTGTTATGGGGTAACATGTTATGATGCA
GACAAATGTGCAGTGAAGAACGAAACAGCGTCACACGAGAAGGGAACACA
GTTGGCCTTGCTCATTCGTAATGAAATGAACAGAAGAGTGTATGTGACAG
CGTACTTGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCATGTCTGGTACC
ATATGGGCTGTCTTCGTCTTCTACAAAAGGTACTCATTACCCATCATCAC
CAAACCGTCCAACCAATCAGATGACGAGGAGAAATGTCAGTTATTATCTG
AACAAGAAAATGAGAAACAATTATTAAAGGATgatcaaaatgaattccaa
gGACCCATGCTTCCTCGGATGCATCAATAAATGGTGGAAAGAATGTTTTG
GAAATTGTTGCTATTGGTCATTTGCTTGACCTGTTGTTATGCTGAGCAAA
CAGGTGTGAAGCGTCTGACCATCCCGTCCAAGAACACTCATCCCACGTGC
AAAAAGAATGAAATCTTGCACAGTGACATTATCGAAAACCATTCTCTCAA
ACGTGGTCTTACACCAAGCAATTACACTCTCCTCGGTAAAGTACCTAACA
TGGGTGATTGCATGGCATTATGTTGTAGTACAAAGCACTGTAACATGGCT
TACATGAAGAATAATACGTGTTATGGGGTAACATGTTATGATGCAGACAA
ATGTGCAGTGAAGAACGAAACAGCGTCACACGAGAAGGGAACACAGTTGG
CCTTGCTCATTCGTAATGAAATGAACAGAAGAGTGTATGTGACAGCGTAC
TTGGTGGTGGTGGTTTGTGCGTTCGGTGCTGCCATGTCTGGTACCATATG
GGCTGTCTTCGTCTTCTACAAAAGGTACTCATTACCCATCATCACCAAAC
CGTCCAACCAATCAGATGACGAGGAGAAATGTCAGTTATTATCTGAACAA
GAAAATGAGAAACAATTATTAAAGGATgatcaaaatgaattccaagGACC
CATGCTTCCTCGGATGCATCAATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003168	XLOC_003168	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00005559-protein	TCONS_00005559-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000054	supercontig	sc0000054:301909..316105 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.010557	0.00661557	0.00960924	0.0117691	0.00444247	0.00165069	3.8957	7.83095e-06	5.03967	2.33833	4.31561	7.84872	17.2413	15.2436	9.45783	29.179	16.1763	19.0886	0.000207115	0.000423687	13.2168	10.5055	8.4547	9.58534	0.0923949	0.0768586	0.032019	0	0.0102813	0.863972

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00005559 vs. Swiss-Prot (Human)

BLAST of TCONS_00005559 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00005559 (transcript) - C. hemisphaerica