TCONS_00005546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005546
Unique NameTCONS_00005546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3251

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005546 ID=TCONS_00005546|Name=TCONS_00005546|organism=Clytia hemisphaerica|type=transcript|length=3251bp
AAATTATAAAGATTTGAATGCGACAAAAATGCCTGGTAAATCGAAAAGCA
GCTCAACTAAAGAAAAGCAATCTTCAAGATCTCTTTCTTCCTTCTTCGGG
TTCAGTAAACGGAACAAGAAAAGTGACGGTACCGAAAAACACGGTgagaa
taataataattatgaaaGACAGTTTTCGGAGCCAGCAAAAAGACCAATCG
AAAATCCTTCAAATAAGAACTTTTACTCTCTCGATCGTAAGCTTTTGAAT
CgtaagaataaaaagaaatcttctaaCGATAAAAATGAAGTAATAAGAAA
ATATGACTTGACAACGAATTCTGGTCCTCAAAATACACGTTGCAATGGAA
TTGAAAATGGTAGTTCAAGTAGCGACGAACCCTCCAATCACATTTCAGCA
CGTGGTCTAAAAAACCATATACAAGAGTGTAAATGTGAGAATGGGGAAAA
AGAAAGGCTTGAGAAACTGAACGGTAGAAACTTGTTAACGAATTTACAAC
TGAAGCTAAATGGAAGTAAGGCTGTTAAAAATGTTGACAAAATGATAAAT
AGGAAGCTATCATCGACAGCCAATCGTCAGGAGCAGGGACTGGAAACCAA
TCTCACTCCAGTACAGTCGGTCCCAAACTTCCGGAAGATAAGCACAACAA
CGAAAACCATAGTtttgaacagtagttttacttCAAGTCCACAACTCCAA
AGATGTTTAAAAGAAAACCGTTTCCATCGACAACATAGTGTCGTTGCAGT
TGGTCGGGGCAACGACGAAGGTCGTCGGCGAAACGACCATCCTCGTAAAT
ACTCGCTACCTCAACGAAAGATGTCGGTGGAACTCAATTACAAGAATATT
CGTAAAGCAAGCCCCattgttttgaagaaattcaaCAGCCCAGCTATAGA
GCAGGTCAAGCTGTTTAATATCGGTCTCCATCTTAGAACATTACAAAATT
CTTCAGAAAGCGACTCTGAACAAGAAAATTCAANGGGTCAAGCTGTTTGA
TATCGGTCCCCATCTTAGAACAATACAAAATTCTTCAGAAAGTGACTCTG
AACAAGAAAATTCAACACATACACAAAGTCAAGACGATAAAAAACTTTCA
CCAGAGTTTCCTACCAATGAAGGTTCGAACGACGATATGAGCGATTCTCG
GGTCAATGAAAACCTAAACGAACATGAAAATGAAGACAAGATTGAAAGTG
GTCAAATAGAGCAGATAATTGAGatgaaagtaaaagaaaaagtcaaatat
AAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGCAAAACTGGTGATCT
ATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGAGCAAACAAAGATTG
GTTCAATGAAAATAACTGCAAACGAAAATTGCAAGGAAATTAAAGATTCA
TCTTCAATAGGAATTTCTCTTGGCAGCACCGATGATTCTTCTATTTGTGA
AAACAATGACACTTCATGTCATCCAAAATCAACTGAAGGTCAGCTTACCC
CAGTGACGAAACATTTTCATCTCAAAGACTTGGAAATATTGGTAACTGTA
GGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAAGATCGTTCACAACA
ACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTATGCGATGAAAGTGA
TGAAAATACAAGATATCATACGTCTTGATCAAATAGAGCATGTGAATAGC
GAAAAAAAGATATTGGAGCTTGTGAACCACCCATTCATCGTGCAATGtcA
TTTTACAGCTCGTGACGACAAGTGTTTATACATGTTATTCGAATACGTGG
CCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGGACGTTTCACACCT
GAAGATACCAAGTTTTACATTAGTGAGATAATAAGCGTACTTGGTTACTT
GCACGAAATGAGTATTGCTTACCGAGATCTGAAACCTGAGAATCTACTCC
TTGACCATGAAGGACATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTT
GTTGAAGATATCACGTGGACGTTATGCGGTACACCAGAATATCTGTCACC
AGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCC
TTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGGCACCCTTTGTTGAT
TCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGTCATCAACTG
GCCTTTGTTTCTCAAGAACACCACTGAACAAGACTTCATCAAGCAACTAG
TGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATTGGAAGGTGCA
GAAGAAGTCAAAAATCATCCAtggtttgatgacgtcatctggaaAGATGT
AGAAAACAGACGGACAAAGccaccAATTATTCCAAAATTGGCCTTCAATA
GTGACACCAGTAATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCA
GGACCAGATATCCCACAAAACATCAAACATAAATTCAAAAACTGGCACTA
TGAAGAATAAGCGTTgtgaaaagatttgaaaaacgCAAAATATTTTACGA
TGCTTGATACTTGTCAATTTGTCGACTCCAGACggaaaattcagtttttt
tgtacaaaatttaatatttatttCTGCATAATAAAATACAAGACTATTTA
CTAAAATTATATACTAATAAAAAACGGAAAATTGCTATTACTATAAATAT
TCTAGGATGATCTAAAAAAGGAGGATTTATATTCTTATTCTAGATTCTTA
GAATTCAAACCAACTTTTGATTCAGTGCTGAGTTCAGATGAACGATGTTA
TAGTTTGTTATCCTCCTGTGCCTTGATTTCAAAGATtgtaaatcaaaaaa
caaaaacgtctAACATGGTAAACCACTCGGTTTTTAAGGTATCTTCGTGT
CTCCTTTCCTATTTTATCTTGCCTACCTTTTATTTTGAATGATATGAATG
ACTATTCATCCCAACGAATCGAttccaagcctttgtaaacttTTTTAACA
AGTTTCAACTATAGTCAGAAAATTAGAATACTACCCCTTAAGAGTGCATA
TCTTGATGCGAACTAGTATTCCAGCAGCTTCATTTTAGTCAAGCTAAATG
GTTCTTTGGTAGATACTGGTGTACGCTGGTGTATATATCAACTACCAGAT
GGAAGTCTTATTCTGAGGGTTCATTGTACTAGTAGCAGAGCATTTGAAAG
CTTTTGCAAACTCTACCGAATTGCTCATCGTCCCGGTAATCCTGTAATGG
A
Run BLAST on NCBI

protein sequence of TCONS_00005546-protein

>TCONS_00005546-protein ID=TCONS_00005546-protein|Name=TCONS_00005546-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
MSDSRVNENLNEHENEDKIESGQIEQIIEMKVKEKVKYKRSSNALLVNDS
KTGDLSPGLLDDEEKVEQTKIGSMKITANENCKEIKDSSSIGISLGSTDD
SSICENNDTSCHPKSTEGQLTPVTKHFHLKDLEILVTVGTGTFGRVFLVE
DRSQQQREGEKTTEKPYAMKVMKIQDIIRLDQIEHVNSEKKILELVNHPF
IVQCHFTARDDKCLYMLFEYVAGGELFTYLRNKGRFTPEDTKFYISEIIS
VLGYLHEMSIAYRDLKPENLLLDHEGHLKFTDFGFAKVVEDITWTLCGTP
EYLSPEAVLGKGYDVSCDWWALGVLTFEMLAGEAPFVDSNSFVLFQKILS
GVINWPLFLKNTTEQDFIKQLVVERSERLGQRKGLEGAEEVKNHPWFDDV
IWKDVENRRTKPPIIPKLAFNSDTSNFDDFDETFEINSGPDIPQNIKHKF
KNWHYEE
Run BLAST on NCBI

transcript from alignment at sc0000054:74537..80872+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005546 ID=TCONS_00005546|Name=TCONS_00005546|organism=Clytia hemisphaerica|type=transcript|length=6336bp|location=Sequence derived from alignment at sc0000054:74537..80872+ (Clytia hemisphaerica)
AAATTATAAAGATTTGAATGCGACAAAAATGCCTGGTAAATCGAAAAGCA GCTCAACTAAAGAAAAGCAATCTTCAAGATCTCTTTCTTCCTTCTTCGGG TTCAGTAAACGGAACAAGAAAAGTGACGGTACCGAAAAACACGGTgagaa taataataattatgaaaGACAGTTTTCGGAGCCAGCAAAAAGACCAATCG AAAATCCTTCAAATAAGAACTTTTACTCTCTCGATCGTAAGCTTTTGAAT CgtaagaataaaaagaaatcttctaaCGATAAAAATGAAGTAATAAGAAA ATATGACTTGACAACGAATTCTGGTCCTCAAAATACACGTTGCAATGGAA TTGAAAATGGTAGTTCAAGTAGCGACGAACCCTCCAATCACATTTCAGCA CGTGGTCTAAAAAACCATATACAAGAGTGTAAATGTGAGAATGGGGAAAA AGAAAGGCTTGAGAAACTGAACGGTAGAAACTTGTTAACGAATTTACAAC TGAAGCTAAATGGAAGTAAGGCTGTTAAAAATGTTGACAAAATGATAAAT AGGAAGCTATCATCGACAGCCAATCGTCAGGAGCAGGGACTGGAAACCAA TCTCACTCCAGTACAGTCGGTCCCAAACTTCCGGAAGATAAGCACAACAA CGAAAACCATAGTtttgaacagtagttttacttCAAGTCCACAACTCCAA AGATGTTTAAAAGAAAACCGTTTCCATCGACAACATAGTGTCGTTGCAGT TGGTCGGGGCAACGACGAAGGTCGTCGGCGAAACGACCATCCTCGTAAAT ACTCGCTACCTCAACGAAAGATGTCGGTGGAACTCAATTACAAGAATATT CGTAAAGCAAGCCCCattgttttgaagaaattcaaCAGCCCAGCTATAGA GCAGGTCAAGCTGTTTAATATCGGTCTCCATCTTAGAACATTACAAAATT CTTCAGAAAGCGACTCTGAACAAGAAAATTCAANGGGTCAAGCTGTTTGA TATCGGTCCCCATCTTAGAACAATACAAAATTCTTCAGAAAGTGACTCTG AACAAGAAAATTCAACACATACACAAAGTCAAGACGATAAAAAACTTTCA CCAGAGTTTCCTACCAATGAAGGTTCGAACGACGATATGAGCGATTCTCG GGTCAATGAAAACCTAAACGAACATGAAAATGAAGACAAGATTGAAAGTG GTCAAATAGAGCAGATAATTGAGatgaaagtaaaagaaaaagtcaaatat AAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGCAAAACTGGTGATCT ATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGAGCAAACAAAGATTG GTTCAATGAAAATAACTGCAAACGAAAATTGCAAGGAAATTAAAGATTCA TCTTCAATAGGAATTTCTCTTGGCAGCACCGATGATTCTTCTATTTGTGA AAACAATGACACTTCATGTCATCCAAAATCAACTGAAGGTCAGCTTACCC CAGTGACGAAACATTTTCATCTCAAAGACTTGGAAATATTGGTAACTGTA GGTACGTATATGCTAAATTCTACTTTCCTCACCCtaagttttgttttctt tttttcttcaccccTGTACCCTAGTGACCAGGTGAAAATCTCAACCCCAG TCAAAATCGCATTGATTAGGGTAAGCcagtcaaaataaaaacatgctagT GAATCATAAACCAGACACTCAAATGCTTTTTGTAACGAAAAGTCTTTCTC TACCCCGgtgaaaaaatcaagttaaaacttcTCCCCCAGTCAGTCTCAAA TTCAAGGCCGGTAATATTCATATTCATATTTTTAATTAGCCAACCCAGTA CCGTGTTATTGAGACAGAAGTGTTTTCTTGCATGCCCCTTTCTTCAACAG TTcttatttttggttttgaaagtCCAATTTTACTGTTAAATTAGATCTCG AGAAAGTATTCAACCCTGATCGACCTGAAATTATAATGTCTTATAAATAA CTATCATCTTAGGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAAGAT CGTTCACAACAACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTATGC GATGAAAGTGATGAAAATACAAGATATCATACGTCTTGATCAAATAGAGC ATGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGAACCACCCATTCATC GTGCAATGGTGAGTTGGCATTACCTTTGTATGTTTTACTTGAGTAGTCTA AATCCCTAATTTGCctagagatgaatcttcaacCCTTTCTCAAGCACGAA ACAGTAAAGCCCTAAAGTTTGCCCTGTATTTGGAATACATAACGGATTGA AACCAGCGCTTTCTTTGTTCTCGCCCggcatatttaaaaaaataaatcta gCTATGGATCTTTCGATatggcgtttgtgtgaaaaccacgcggcTCACGC ATTTTGtgctttaaattttttagaCTGTATCTTATCGCGTCAATAAGACA AgagtatttttaaaaatttagcaCTAGTTGAAATTTAAGAGAGAAGAGAT TTTTGGTAAAGAAAACTGAAGGGCATTATTATACAAATTATCCGCCCCTC GATAGTTATTTCATATCTATAAAACGTATTATAAACGACTCTTGCTTGTC GAGATGGTAAGGCAGAGATTGAGTCTGGAACATATGAAGACGcgactttt ttgtttcaaatcaCTCCATacgtttttcttcttttttcagtcATTTTACA GCTCGTGACGACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGG TGAATTGTTCACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATA CCAAGTTTTACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAA ATGAGTATTGCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCA TGAAGGACATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAG ATATGTAAGTGTACTATATTTCACAGATCTGATTAAAGTTGTGATATCGT TATCTATCTCGTTCTATTAAAAACAAGCTCTATTGTGTTTTGTGATGCAG AAAATATGAGGGTCTTACATATTCTTCATTGAACAACCTGCTGATCAATG ATTATTGTATCGAGTTCTATGTGAAGTGCCTTGTAAGCTCTTTTACACTG CTCCGATTTTAACGCACTGGTTCAGCAAGAACCGAGCCACCAAGATAGTA TCtatacaccctcttctcacagactcgatgagattttatcagccagtaaA AATAACGGTCtcaaactcgatggggattgatagtCCCATGTTTctaatgg ctggggatttgaattcaattgttttctagccaaaaAATGAGTGAAAAGAT AGTACAATACTTTGCTGTGGGGATTTGCTCATCTGATTTATTTTCAGTGG gtacaaaaattagagtataattttccactggagacaatattttcgacaat ttttccagtgggtctttAAGAAGGGGATGTACCTATCGTCTCTTTATCTT ATCATGAGGTAACTTGCCTGAGATAAGGACCTAAATCTTGATTAAGCTAT TTTCTACAAGTAGAAATGAaagttcttcttcttctttattaGCACGTGGA CGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCTTGGGAAA GGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTACATTCGA AATGTTGGCTGGGTAAGTAAACTGggtacatttttataagaacaaactat ataagaacacaaggctccttaaaacaagttgagaacattttagaTTTTAG GGCCTTCTGGACTCTAAAAGacccattttttatttcttggacaaaaaaac tcaaaaattggtgaaaataagaacatgttaagaacatttttacgcTTAAa acccgaaaagttaagaacatctgaaagcttcaaaaattatggataTTCTA ATAAAAAGGCGTGTAACAATAACTGCTGTTTGGATTCAAAGATCTTATTA TATCACCTTCCACTAGTGTAGATCTGAGATCTCCTTTCgaattcaatttt ttagaaTAGGACTGATTCCTATTGAAAGGAAAGTTTGCTGAACATAACAT AATCATATTTTTTTTGCAGGGAGGCACCCTTTGTTGATTCCAATTCATTC GTGTTGTTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCT CAAGAACACCACTGAACAGTATAAatatatatattctttaaatttAACAG AAAATCTTGATTTAAAATACCCAACCCAGTTTGTTCGTAAATAGGAatta aaaagcgaaaaatacTCCTTGAAAGTTATTAGTGCGTACAGCGTCCTTTG CGTTAACTTCCCTTACATATAGATACTTGCAATATCAAAAAACGCAATAA CTTTCATGGTTTATTAACCGTTCAAATGTACTGTGAGATTTAAACCCTTA TAAATTCAAgctaaaagaaaatttgacgTATGCGACGCGGAGTGATATAG GcctgaaaattttatcaaattatggACCTGACAAGCCTCAAAATGAACAA GCAGTAGTATTTGTTAGATTTGGAAGTTGTTATGAACACAAAACACTTTG AATTTGTTTAGAGACTTCATCAAGCAACTAGTGGTGGAAAGAAGTGAGCG ACTTGGTCAACGTAAAGGATTGGTATGTATCTAAATTCTTTAAGTAGCAA TAAATAGCAATATTaccacacccctgtctcagtgagcAAATCTTTCAGTA AGCTGGGATTAAATAAAGATCTTAATGTTGTCAATGGTgtgaaaagaaac aaagaaaaagatgatAAATGCAGGAAAGGGGTCAGTGAAATTAATCGCAA AACCTTTTGGGGATATCTTCAAAATAGGTAAAAATCCAGGGAAATTTGAC CTTCCAAAAATGACCTCTTGAATATATACTATATATTATATTCTAAGAAT AAGACTTCTTTGGAAGCAAGACAGGGATGCTTTGGAAGCAAGACATTGAT GTTCTTTACTTTCTTTACTTACAGGAAGGTGCAGAAGAAGTCAAAAATCA TCCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACGGACAA AGGTAAGCGCTGAATGTCTATTGATCACTATAATAAGTTTTTAtataagg gtttaaaatctaGCAAATGGCTATATTCAGACATCATAAAAAAGGCTGAA AATTTGGACGATCgataaaaatatattattttaagACTACGAAAGAAGTT CTTTCCCATGTTACATATTTGATATATTAACGTGTCCAGGAAAAGATATA GGCTTAGGCTAAAATAAAATCATATAgttgttgattttgttttggctttt gaacaaaattacttacattttctttggaatcattcttcttgttttttttt tcagccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTAATT TCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATCCCA CAAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAAGCGTT gtgaaaagatttgaaaaacgCAAAATATTTTACGATGCTTGATACTTGTC AATTTGTCGACTCCAGACggaaaattcagtttttttgtacaaaatttaat atttatttCTGCATAATAAAATACAAGACTATTTACTAAAATTATATACT AATAAAAAACGGAAAATTGCTATTACTATAAATATTCTAGGATGATCTAA AAAAGGAGGATTTATATTCTTATTCTAGATTCTTAGAATTCAAACCAACT TTTGATTCAGTGCTGAGTTCAGATGAACGATGTTATAGTTTGTTATCCTC CTGTGCCTTGATTTCAAAGATtgtaaatcaaaaaacaaaaacgtctAACA TGGTAAACCACTCGGTTTTTAAGGTATCTTCGTGTCTCCTTTCCTATTTT ATCTTGCCTACCTTTTATTTTGAATGATATGAATGACTATTCATCCCAAC GAATCGAttccaagcctttgtaaacttTTTTAACAAGTTTCAACTATAGT CAGAAAATTAGAATACTACCCCTTAAGAGTGCATATCTTGATGCGAACTA GTATTCCAGCAGCTTCATTTTAGTCAAGCTAAATGGTTCTTTGGTAGATA CTGGTGTACGCTGGTGTATATATCAACTACCAGATGGAAGTCTTATTCTG AGGGTTCATTGTACTAGTAGCAGAGCATTTGAAAGCTTTTGCAAACTCTA CCGAATTGCTCATCGTCCCGGTAATCCTGTAATGGA

Coding sequence (CDS) from alignment at sc0000054:74537..80872+

>TCONS_00005546 ID=TCONS_00005546|Name=TCONS_00005546|organism=Clytia hemisphaerica|type=CDS|length=10992bp|location=Sequence derived from alignment at sc0000054:74537..80872+ (Clytia hemisphaerica)
ATGAGCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGA
CAAGATTGAAAGTGGTCAAATAGAGCAGATAATTGAGatgaaagtaaaag
aaaaagtcaaatatAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGC
AAAACTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGA
GCAAACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGG
AAATTAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGAT
TCTTCTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGA
AGGTCAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAA
TATTGGTAACTGTAGGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAA
GATCGTTCACAACAACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTA
TGCGATGAAAGTGATGAAAATACAAGATATCATACGTCTTGATCAAATAG
AGCATGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGAACCACCCATTC
ATCGTGCAATGtcATTTTACAGCTCGTGACGACAAGTGTTTATACATGTT
ATTCGAATACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAG
GACGTTTCACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGC
GTACTTGGTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACC
TGAGAATCTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTG
GTTTTGCTAAAGTTGTTGAAGATATCACGTGGACGTTATGCGGTACACCA
GAATATCTGTCACCAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTG
TGATTGGTGGGCCCTTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGG
CACCCTTTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCA
GGAGTCATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAAGACTT
CATCAAGCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAG
GATTGGAAGGTGCAGAAGAAGTCAAAAATCATCCAtggtttgatgacgtc
atctggaaAGATGTAGAAAACAGACGGACAAAGccaccAATTATTCCAAA
ATTGGCCTTCAATAGTGACACCAGTAATTTCGATGACTTTGATGAAACTT
TCGAGATAAATTCAGGACCAGATATCCCACAAAACATCAAACATAAATTC
AAAAACTGGCACTATGAAGAATAAATGAGCGATTCTCGGGTCAATGAAAA
CCTAAACGAACATGAAAATGAAGACAAGATTGAAAGTGGTCAAATAGAGC
AGATAATTGAGatgaaagtaaaagaaaaagtcaaatatAAGCGAAGTAGC
AATGCTTTATTAGTGAATGATAGCAAAACTGGTGATCTATCTCCCGGTTT
ATTGGATGATGAGGAAAAAGTTGAGCAAACAAAGATTGGTTCAATGAAAA
TAACTGCAAACGAAAATTGCAAGGAAATTAAAGATTCATCTTCAATAGGA
ATTTCTCTTGGCAGCACCGATGATTCTTCTATTTGTGAAAACAATGACAC
TTCATGTCATCCAAAATCAACTGAAGGTCAGCTTACCCCAGTGACGAAAC
ATTTTCATCTCAAAGACTTGGAAATATTGGTAACTGTAGGAACTGGAACA
TTTGGTCGCGTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGG
AGAGAAAACAACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAG
ATATCATACGTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATA
TTGGAGCTTGTGAACCACCCATTCATCGTGCAATGtcATTTTACAGCTCG
TGACGACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAAT
TGTTCACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAAG
TTTTACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGAG
TATTGCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAAG
GACATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATC
ACGTGGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCT
TGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTA
CATTCGAAATGTTGGCTGGGGAGGCACCCTTTGTTGATTCCAATTCATTC
GTGTTGTTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCT
CAAGAACACCACTGAACAAGACTTCATCAAGCAACTAGTGGTGGAAAGAA
GTGAGCGACTTGGTCAACGTAAAGGATTGGAAGGTGCAGAAGAAGTCAAA
AATCATCCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACG
GACAAAGccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTA
ATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATC
CCACAAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAAAT
GAGCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGACA
AGATTGAAAGTGGTCAAATAGAGCAGATAATTGAGatgaaagtaaaagaa
aaagtcaaatatAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGCAA
AACTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGAGC
AAACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGGAA
ATTAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGATTC
TTCTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGAAG
GTCAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAATA
TTGGTAACTGTAGGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAAGA
TCGTTCACAACAACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTATG
CGATGAAAGTGATGAAAATACAAGATATCATACGTCTTGATCAAATAGAG
CATGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGAACCACCCATTCAT
CGTGCAATGtcATTTTACAGCTCGTGACGACAAGTGTTTATACATGTTAT
TCGAATACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGGA
CGTTTCACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGCGT
ACTTGGTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACCTG
AGAATCTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTGGT
TTTGCTAAAGTTGTTGAAGATATCACGTGGACGTTATGCGGTACACCAGA
ATATCTGTCACCAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTG
ATTGGTGGGCCCTTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGGCA
CCCTTTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGG
AGTCATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAAGACTTCA
TCAAGCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGA
TTGGAAGGTGCAGAAGAAGTCAAAAATCATCCAtggtttgatgacgtcat
ctggaaAGATGTAGAAAACAGACGGACAAAGccaccAATTATTCCAAAAT
TGGCCTTCAATAGTGACACCAGTAATTTCGATGACTTTGATGAAACTTTC
GAGATAAATTCAGGACCAGATATCCCACAAAACATCAAACATAAATTCAA
AAACTGGCACTATGAAGAATAAATGAGCGATTCTCGGGTCAATGAAAACC
TAAACGAACATGAAAATGAAGACAAGATTGAAAGTGGTCAAATAGAGCAG
ATAATTGAGatgaaagtaaaagaaaaagtcaaatatAAGCGAAGTAGCAA
TGCTTTATTAGTGAATGATAGCAAAACTGGTGATCTATCTCCCGGTTTAT
TGGATGATGAGGAAAAAGTTGAGCAAACAAAGATTGGTTCAATGAAAATA
ACTGCAAACGAAAATTGCAAGGAAATTAAAGATTCATCTTCAATAGGAAT
TTCTCTTGGCAGCACCGATGATTCTTCTATTTGTGAAAACAATGACACTT
CATGTCATCCAAAATCAACTGAAGGTCAGCTTACCCCAGTGACGAAACAT
TTTCATCTCAAAGACTTGGAAATATTGGTAACTGTAGGAACTGGAACATT
TGGTCGCGTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAG
AGAAAACAACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGAT
ATCATACGTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATT
GGAGCTTGTGAACCACCCATTCATCGTGCAATGtcATTTTACAGCTCGTG
ACGACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAATTG
TTCACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAAGTT
TTACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGAGTA
TTGCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAAGGA
CATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATCAC
GTGGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCTTG
GGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTACA
TTCGAAATGTTGGCTGGGGAGGCACCCTTTGTTGATTCCAATTCATTCGT
GTTGTTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCTCA
AGAACACCACTGAACAAGACTTCATCAAGCAACTAGTGGTGGAAAGAAGT
GAGCGACTTGGTCAACGTAAAGGATTGGAAGGTGCAGAAGAAGTCAAAAA
TCATCCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACGGA
CAAAGccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTAAT
TTCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATCCC
ACAAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAAATGA
GCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGACAAG
ATTGAAAGTGGTCAAATAGAGCAGATAATTGAGatgaaagtaaaagaaaa
agtcaaatatAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGCAAAA
CTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGAGCAA
ACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGGAAAT
TAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGATTCTT
CTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGAAGGT
CAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAATATT
GGTAACTGTAGGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAAGATC
GTTCACAACAACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTATGCG
ATGAAAGTGATGAAAATACAAGATATCATACGTCTTGATCAAATAGAGCA
TGTGAATAGCGAAAAAAAGATATTGGAGCTTGTGAACCACCCATTCATCG
TGCAATGtcATTTTACAGCTCGTGACGACAAGTGTTTATACATGTTATTC
GAATACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGGACG
TTTCACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGCGTAC
TTGGTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACCTGAG
AATCTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTGGTTT
TGCTAAAGTTGTTGAAGATATCACGTGGACGTTATGCGGTACACCAGAAT
ATCTGTCACCAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGAT
TGGTGGGCCCTTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGGCACC
CTTTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAG
TCATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAAGACTTCATC
AAGCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATT
GGAAGGTGCAGAAGAAGTCAAAAATCATCCAtggtttgatgacgtcatct
ggaaAGATGTAGAAAACAGACGGACAAAGccaccAATTATTCCAAAATTG
GCCTTCAATAGTGACACCAGTAATTTCGATGACTTTGATGAAACTTTCGA
GATAAATTCAGGACCAGATATCCCACAAAACATCAAACATAAATTCAAAA
ACTGGCACTATGAAGAATAAATGAGCGATTCTCGGGTCAATGAAAACCTA
AACGAACATGAAAATGAAGACAAGATTGAAAGTGGTCAAATAGAGCAGAT
AATTGAGatgaaagtaaaagaaaaagtcaaatatAAGCGAAGTAGCAATG
CTTTATTAGTGAATGATAGCAAAACTGGTGATCTATCTCCCGGTTTATTG
GATGATGAGGAAAAAGTTGAGCAAACAAAGATTGGTTCAATGAAAATAAC
TGCAAACGAAAATTGCAAGGAAATTAAAGATTCATCTTCAATAGGAATTT
CTCTTGGCAGCACCGATGATTCTTCTATTTGTGAAAACAATGACACTTCA
TGTCATCCAAAATCAACTGAAGGTCAGCTTACCCCAGTGACGAAACATTT
TCATCTCAAAGACTTGGAAATATTGGTAACTGTAGGAACTGGAACATTTG
GTCGCGTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAG
AAAACAACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATAT
CATACGTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGG
AGCTTGTGAACCACCCATTCATCGTGCAATGtcATTTTACAGCTCGTGAC
GACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAATTGTT
CACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAAGTTTT
ACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGAGTATT
GCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAAGGACA
TTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATCACGT
GGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCTTGGG
AAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTACATT
CGAAATGTTGGCTGGGGAGGCACCCTTTGTTGATTCCAATTCATTCGTGT
TGTTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCTCAAG
AACACCACTGAACAAGACTTCATCAAGCAACTAGTGGTGGAAAGAAGTGA
GCGACTTGGTCAACGTAAAGGATTGGAAGGTGCAGAAGAAGTCAAAAATC
ATCCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACGGACA
AAGccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTAATTT
CGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATCCCAC
AAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAAATGAGC
GATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAATGAAGACAAGAT
TGAAAGTGGTCAAATAGAGCAGATAATTGAGatgaaagtaaaagaaaaag
tcaaatatAAGCGAAGTAGCAATGCTTTATTAGTGAATGATAGCAAAACT
GGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAAAGTTGAGCAAAC
AAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATTGCAAGGAAATTA
AAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACCGATGATTCTTCT
ATTTGTGAAAACAATGACACTTCATGTCATCCAAAATCAACTGAAGGTCA
GCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACTTGGAAATATTGG
TAACTGTAGGAACTGGAACATTTGGTCGCGTTTTTCTTGTTGAAGATCGT
TCACAACAACAACGAGAAGGAGAGAAAACAACTGAAAAACCTTATGCGAT
GAAAGTGATGAAAATACAAGATATCATACGTCTTGATCAAATAGAGCATG
TGAATAGCGAAAAAAAGATATTGGAGCTTGTGAACCACCCATTCATCGTG
CAATGtcATTTTACAGCTCGTGACGACAAGTGTTTATACATGTTATTCGA
ATACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGGACGTT
TCACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGCGTACTT
GGTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACCTGAGAA
TCTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTGGTTTTG
CTAAAGTTGTTGAAGATATCACGTGGACGTTATGCGGTACACCAGAATAT
CTGTCACCAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGATTG
GTGGGCCCTTGGTGTTCTTACATTCGAAATGTTGGCTGGGGAGGCACCCT
TTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGTC
ATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAAGACTTCATCAA
GCAACTAGTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATTGG
AAGGTGCAGAAGAAGTCAAAAATCATCCAtggtttgatgacgtcatctgg
aaAGATGTAGAAAACAGACGGACAAAGccaccAATTATTCCAAAATTGGC
CTTCAATAGTGACACCAGTAATTTCGATGACTTTGATGAAACTTTCGAGA
TAAATTCAGGACCAGATATCCCACAAAACATCAAACATAAATTCAAAAAC
TGGCACTATGAAGAATAAATGAGCGATTCTCGGGTCAATGAAAACCTAAA
CGAACATGAAAATGAAGACAAGATTGAAAGTGGTCAAATAGAGCAGATAA
TTGAGatgaaagtaaaagaaaaagtcaaatatAAGCGAAGTAGCAATGCT
TTATTAGTGAATGATAGCAAAACTGGTGATCTATCTCCCGGTTTATTGGA
TGATGAGGAAAAAGTTGAGCAAACAAAGATTGGTTCAATGAAAATAACTG
CAAACGAAAATTGCAAGGAAATTAAAGATTCATCTTCAATAGGAATTTCT
CTTGGCAGCACCGATGATTCTTCTATTTGTGAAAACAATGACACTTCATG
TCATCCAAAATCAACTGAAGGTCAGCTTACCCCAGTGACGAAACATTTTC
ATCTCAAAGACTTGGAAATATTGGTAACTGTAGGAACTGGAACATTTGGT
CGCGTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAGAA
AACAACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATATCA
TACGTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGGAG
CTTGTGAACCACCCATTCATCGTGCAATGtcATTTTACAGCTCGTGACGA
CAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAATTGTTCA
CTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAAGTTTTAC
ATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGAGTATTGC
TTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAAGGACATT
TGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATCACGTGG
ACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCTTGGGAA
AGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTACATTCG
AAATGTTGGCTGGGGAGGCACCCTTTGTTGATTCCAATTCATTCGTGTTG
TTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCTCAAGAA
CACCACTGAACAAGACTTCATCAAGCAACTAGTGGTGGAAAGAAGTGAGC
GACTTGGTCAACGTAAAGGATTGGAAGGTGCAGAAGAAGTCAAAAATCAT
CCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACGGACAAA
GccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTAATTTCG
ATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATCCCACAA
AACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003162XLOC_003162Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005546-proteinTCONS_00005546-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005546-exon-sc0000054-1491911889:74537..76087TCONS_00005546-exon-sc0000054-1491911889:74537..76087Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:74537..76087TCONS_00005546-exon-sc0000054-1510915933:74537..76087Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:74537..76087TCONS_00005546-exon-sc0000054-1575043694:74537..76087Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:76549..76744TCONS_00005546-exon-sc0000054-1491911889:76549..76744Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:76549..76744TCONS_00005546-exon-sc0000054-1510915933:76549..76744Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:76549..76744TCONS_00005546-exon-sc0000054-1575043694:76549..76744Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:77277..77540TCONS_00005546-exon-sc0000054-1491911889:77277..77540Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:77277..77540TCONS_00005546-exon-sc0000054-1510915933:77277..77540Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:77277..77540TCONS_00005546-exon-sc0000054-1575043694:77277..77540Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:78179..78298TCONS_00005546-exon-sc0000054-1491911889:78179..78298Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:78179..78298TCONS_00005546-exon-sc0000054-1510915933:78179..78298Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:78179..78298TCONS_00005546-exon-sc0000054-1575043694:78179..78298Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:78706..78804TCONS_00005546-exon-sc0000054-1491911889:78706..78804Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:78706..78804TCONS_00005546-exon-sc0000054-1510915933:78706..78804Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:78706..78804TCONS_00005546-exon-sc0000054-1575043694:78706..78804Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:79198..79258TCONS_00005546-exon-sc0000054-1491911889:79198..79258Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:79198..79258TCONS_00005546-exon-sc0000054-1510915933:79198..79258Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:79198..79258TCONS_00005546-exon-sc0000054-1575043694:79198..79258Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:79611..79688TCONS_00005546-exon-sc0000054-1491911889:79611..79688Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:79611..79688TCONS_00005546-exon-sc0000054-1510915933:79611..79688Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:79611..79688TCONS_00005546-exon-sc0000054-1575043694:79611..79688Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1491911889:79991..80872TCONS_00005546-exon-sc0000054-1491911889:79991..80872Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1510915933:79991..80872TCONS_00005546-exon-sc0000054-1510915933:79991..80872Clytia hemisphaericaexon
TCONS_00005546-exon-sc0000054-1575043694:79991..80872TCONS_00005546-exon-sc0000054-1575043694:79991..80872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000054supercontigsc0000054:74537..80872 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.020723 0.0404163 0.0156849 0 0.111784 0.0436812 0.829225 1.01364 1.46688 1.12479 0.698042 0.855637 4.03677 3.00572 0.820955 0.479864 0.42003 0.213577 7.51751 4.73886 0.721302 0.762289 0.498972 0.756063 0.533984 0.595238 2.0459 0.727814 0.134353 0.0937371
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR000961AGC-kinase_C
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR011009Kinase-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0004674protein serine/threonine kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004674 protein serine/threonine kinase activity
Blast
BLAST of TCONS_00005546 vs. Swiss-Prot (Human)
Match: PRKX (cAMP-dependent protein kinase catalytic subunit PRKX OS=Homo sapiens GN=PRKX PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 3.986e-99
Identity = 158/300 (52.67%), Postives = 208/300 (69.33%), Query Frame = 3
Query: 1494 LTPVTKHFHLKDLEILVTVGTGTFGRVFLVEDRSQQQREGEKTTEKPYAMKVMKIQDIIRLDQIEHVNSEKKILELVNHPFIVQCHFTARDDKCLYMLFEYVAGGELFTYLRNKGRFTPEDTKFYISEIISVLGYLHEMSIAYRDLKPENLLLDHEGHLKFTDFGFAKVVEDITWTLCGTPEYLSPEAVLGKGYDVSCDWWALGVLTFEMLAGEAPFVDSNSFVLFQKILSGVINWPLFLKNTTEQDFIKQLVVERSERLGQRKGLEGAEEVKNHPWFDDVIWKDVENRRTKPPIIPKLA 2393
            L+P    + L+D + L TVGTGTFGRV LV+         EKT +  +A+KVM I D+IRL Q +HV++EK +L+ V+HPF+++  +T  D++ LYML EYV GGELF+YLRN+GRF+     FY +EII  + YLH   I YRDLKPEN+LLD +GH+K TDFGFAK + D TWTLCGTPEYL+PE +  KG+  + DWWALG+L FEML+G  PF D N F ++QKIL+G I++P  L    +    K LVV+R+ RLG  K   GA +VK+H WF  V W+ V  R+ KPPI+PK+A
Sbjct:   37 LSPEPPVYSLQDFDTLATVGTGTFGRVHLVK---------EKTAKHFFALKVMSIPDVIRLKQEQHVHNEKSVLKEVSHPFLIRLFWTWHDERFLYMLMEYVPGGELFSYLRNRGRFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRDGHIKLTDFGFAKKLVDRTWTLCGTPEYLAPEVIQSKGHGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGKIDFPRHLDFHVKDLIKKLLVVDRTRRLGNMKN--GANDVKHHRWFRSVDWEAVPQRKLKPPIVPKIA 325          
The following BLAST results are available for this feature:
BLAST of TCONS_00005546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRKX3.986e-9952.67cAMP-dependent protein kinase catalytic subunit PR... [more]
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