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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005545 ID=TCONS_00005545|Name=TCONS_00005545|organism=Clytia hemisphaerica|type=transcript|length=1539bp
TGAGCAACGACgttttaaatgataaatttgcTAAGtcATTTTACAGCTCG
TGACGACAAGTGTTTATACATGTTATTCGAATACGTGGCCGGTGGTGAAT
TGTTCACTTATCTCCGTAATAAAGGACGTTTCACACCTGAAGATACCAAG
TTTTACATTAGTGAGATAATAAGCGTACTTGGTTACTTGCACGAAATGAG
TATTGCTTACCGAGATCTGAAACCTGAGAATCTACTCCTTGACCATGAAG
GACATTTGAAATTCACAGATTTTGGTTTTGCTAAAGTTGTTGAAGATATC
ACGTGGACGTTATGCGGTACACCAGAATATCTGTCACCAGAAGCAGTGCT
TGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCCCTTGGTGTTCTTA
CATTCGAAATGTTGGCTGGGGAGGCACCCTTTGTTGATTCCAATTCATTC
GTGTTGTTTCAAAAGATCTTATCAGGAGTCATCAACTGGCCTTTGTTTCT
CAAGAACACCACTGAACAAGACTTCATCAAGCAACTAGTGGTGGAAAGAA
GTGAGCGACTTGGTCAACGTAAAGGATTGGAAGGTGCAGAAGAAGTCAAA
AATCATCCAtggtttgatgacgtcatctggaaAGATGTAGAAAACAGACG
GACAAAGccaccAATTATTCCAAAATTGGCCTTCAATAGTGACACCAGTA
ATTTCGATGACTTTGATGAAACTTTCGAGATAAATTCAGGACCAGATATC
CCACAAAACATCAAACATAAATTCAAAAACTGGCACTATGAAGAATAAGC
GTTgtgaaaagatttgaaaaacgCAAAATATTTTACGATGCTTGATACTT
GTCAATTTGTCGACTCCAGACggaaaattcagtttttttgtacaaaattt
aatatttatttCTGCATAATAAAATACAAGACTATTTACTAAAATTATAT
ACTAATAAAAAACGGAAAATTGCTATTACTATAAATATTCTAGGATGATC
TAAAAAAGGAGGATTTATATTCTTATTCTAGATTCTTAGAATTCAAACCA
ACTTTTGATTCAGTGCTGAGTTCAGATGAACGATGTTATAGTTTGTTATC
CTCCTGTGCCTTGATTTCAAAGATtgtaaatcaaaaaacaaaaacgtctA
ACATGGTAAACCACTCGGTTTTTAAGGTATCTTCGTGTCTCCTTTCCTAT
TTTATCTTGCCTACCTTTTATTTTGAATGATATGAATGACTATTCATCCC
AACGAATCGAttccaagcctttgtaaacttTTTTAACAAGTTTCAACTAT
AGTCAGAAAATTAGAATACTACCCCTTAAGAGTGCATATCTTGATGCGAA
CTAGTATTCCAGCAGCTTCATTTTAGTCAAGCTAAATGGTTCTTTGGTAG
ATACTGGTGTACGCTGGTGTATATATCAACTACCAGATGGAAGTCTTATT
CTGAGGGTTCATTGTACTAGTAGCAGAGCATTTGAAAGCTTTTGCAAACT
CTACCGAATTGCTCATCGTCCCGGTAATCCTGTAATGGA Run BLAST on NCBI transcript from alignment at sc0000054:68167..80872+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005545 ID=TCONS_00005545|Name=TCONS_00005545|organism=Clytia hemisphaerica|type=transcript|length=12706bp|location=Sequence derived from alignment at sc0000054:68167..80872+ (Clytia hemisphaerica)
TGAGCAACGACgttttaaatgataaatttgcTAAGGTATAAACTTGTCTG
TTGACTAtgtaatcatgtcagagggctgGAACATAAGGGCGGCAGGTGTC
TGCTAAAATAGAACATGCGTAGGAGAACAAGCATAATTTAGAGGCGCTGC
GGACTAACACGATCTGCCAATGACGAATCTTTCTATTACTTATTTCACAG
CTTTCTCAAAGCTCATAGCGCGCCGCAACttatacgtcataattattact
ttttactttttttgacatttgtacgagttgcaatcccacaattcaagata
cgtgcaagctgttagatatcttttgtcaaacgatgcaattaacgtgcaaa
aaagattaacgcaaaggttgatgggattggaactcgtacaaacacatcga
gagtaaggattatgtcaaaaataaaatatatttttagattcagcgcggtg
cgctattggTTTCAACCTCGTTGAAGTGTGAGGTTGAGGCTTTAGCTTAC
ACGTTTTCCTTCCTGGCATTTAGCTCTAGTCAGCCCCTCTCACCGATAGA
TCTTATTTCCTCGCTTACCTAACTCTCACGCTCTTTTTTCCACGTGATAT
CATTCCAGCCCGACAGGTGTGTCAGTCTAATAAAGAAACTGGGGTATCTG
CATCTCTTCCCTCGTCTCCACACTACCAACGAAACAGCTGATCATTAGAC
AAAATAGTTAATTTTCCCAGGATTAAGCACATTGGCCTTTTTAGAAATAT
GCTTATAAATTGGCTTGCTTGTGACTCCAATCTCTTAAATTTGACAATCA
ATCTGTCTATCAACGCTCAGTATTAGTAAAATAAATACATTGACAGACAG
ACAATTAAATCGTCAAATGGGAAAGAAATATACATTCATATCTCTGTACA
GTCTAATATTTTCAACATCGATGCACGCGGTCTTTTTAAGAAATCTTTTA
CTGCTTCACTTGGTCGAACAACAAAAAACGCTCGCTTTTACATACATTTC
CTAAGCTCTCTGATGAGAAAGGCTAAGGGGCCCTTTTAACACTCGATTAA
AGCTTctagagaaaaatgaaaatggttGAAATGTAACGCAAGTCTTGGGT
ATGGTGTTTCTTATAAACACCAGTGATATTGCGCAAATATATTTGGATAA
TATTTCTTACAACCTGTTTTTGCATAAATGGGAATATTTTGTGTCAATAA
AACCAATCATTTGTCAAACATTAAGCAGTTTGATTAAATATACTATTTTT
TTGTATCgactttgttttcaaattttgacacaaaTGATGTATAGTTTGTT
GTGGCATCTTTGGAAAATCGTTATATCTTAATATACTTGGTTGTAGTCCT
TAGTAGTGGGGGACAAATGAAAGAAATGATAGAGTACATTTATCTTTGAA
AGAAGGCTGTGCTGGAGCTTGTTTCGAGTAAAATTTAAAGGGTGAAGTGA
GTCTGATCCTCTAGTTCTTCACAAGGAGTGATTAAGAAGAGCAACTTTCG
ATTAAGTTATTATTTTCCAATGTTCATAGTAAAAAGgcttaaagattttc
tttttacataagtgttcccgtttcatatcagacacatattccatatcagg
acagtgtctgcctattgttatattatgctgattaaagcaaaaaatgtttt
tctttattcttcttttctgaccaatcttgctccacatccgtgtcaatcca
atgtgaaaaagcttgcgaattaaaattgattagtaagcaaacgatatcac
tcttattaaaaaacaaaacctttaaactagGCAAAATTAGGATTAATCAA
ACTAGGCTCAAACATCAAACCCAGAATAGTTTTTAAAGCATCGGTACCCT
TGACTACGTTGGAAAGACGGGGGTAAgtatatgttttattttttggtcCA
AAAATCTTTCATTGAATTCCATTTCTGAATCCTATCTAGTGAAAGggtaa
tcaaatttttgaaattgttgGAAGTTGGTCAGTTCATTTTTAAAAGCTAC
CTTTGTTTAAGTTTTTGGTAAATANTGGTCCAAAAGTCTTTCATTGAATT
CCATTTCTGAATCCTATCTAGTGAAAGggtaatcaaatttttgaaattgt
tgGAAATTGGTCAGTTCATTTTTAAAAGCTacctttgtttatgtttttgg
taAATGCGTAAGACCTCGTTATAGTTCATTAGAACCTAAATCTTTGAGTC
AATTTTGAAATCCTTAAGACTATATACAACAAAATCTATAGCATACTCTC
TTGACGCATCCAGTCATCGTTTTATTGAGTTGAGATTTCAATGAGTAAAC
ATTTCAACACTTAAGAAAGGAATTGATTTCACGTAGGCATTGATATTGGT
AGGATCTCAATTAATGTTTTGAAGGTATTAATGCGTTGGTATAATATCTT
TGACATTCTGTCAGTAGACAGGAAACcaagaaaattagattttgtcaaAC
TAGTTATTGTCAAAATAAATTTATGTGATATCGATTTTGTAAACCAGACT
TTGGTTATTTAAAGTATATTGGTTGGTTAGTATGGCTTTTGCTTTACTAA
GTTGAGTATGAAGTTGTTTTATCTTCGATTTTTAAGCTCACGACGATAAT
TTCAGCCGGATAATTTTTATAGAGAAACAAACATTTTTAGAGGGTCATAT
TTAGTCACTTTAGGAAGCCTTATGGTTTCTAACCGAAAATTTAgagaccc
ccccccctagatTGTGGTACCCATTGAATATTTTGTCACAATTTCACCCT
GAGAATTTTTAGGGTTTTATGGCATATCCAAAATTTCCCCTCGGTAGAAA
ATATATCCTTTTCAACAAATAGGAACAAGGTAACATTTTGTCCTGTCGGC
TACGACGGGCTAGTTGGTATGGGTTGAATCCCTACCATTTGAAATGGAGA
CTTGCCGTATAATGCTGGGCAATTTTAGCGATTAGTATCAAGAGTAAGTA
TCAATCCCGGATAAAGGGTAGTTACCTTAGGCTACAGCTTTCTAAAGAGG
AGCCTATGCGTGTCGCTGCGATCACCGACTTACTTACAACTTGTTAACTG
TATGGAGGAGATAAAAATTTATCGGTAACAACGTCCTTATTTTCTTGACC
TTTATATTTTTCGACATATCAAAAAATTGTAGTAGTGAGTAGTAATTCGT
CTGGTATTTTTTATGCTCTATTTTATGGCACGCAGTTGCCAATTAACATA
GCAATTAGCATGAGGTCTTTACTAATTAACCTATCACAAACACGTTAATT
AATCGAATACATAATTTGCATCATACAGGAGCGTTATATGCAACCTAGCA
GGATAATTTAATGCCCgatattttgttcaaaataaTAGCCCAGTAGCGTA
CGGATAAGactgaaatttttcaacaaaacacATTGGAGTTATGAATAGAT
AAGtttttctcttcaaaaatcAGCATTAATCCATTGGCCATTTTAGCATT
TACAGAGCACCCACTCTTGGACCAATCTGAAATATTTCCTGTATGACTTA
TATTGTGAGATATTAAAACCACCAAGCAAGTTTTAAGGAATAAAACCTAC
TTTGGTAACAATCCAATCGTACTGATTACTAATTTAATCAAAGGAATTTG
TTTGACGTCAATGAAAAATCTTCTGatggttttttttttgccttattGAT
AATACCTTCCTTGTATCTTCCCACATGTTTAATGAGAATAAGTAGTTTAA
TAGTGGGTAATGTATAGATGGTTGGTTGAGTGATGGTAAAATATAACGGT
CGGTTTAAGTTTATTAGTTATCTTCCATAAAGTTTTTGATTCAATCCTGT
CTCATTGACTTTTAGAAATTGTTAGTGATATGAAGCCATTGGATAGAATG
CCGATAGGGATTACAAACGCCTGTTTTAAGCGCATATGGATCTCAAATTC
TATTATTTACGGATTAGAAAGTCTAAGGTGGATTCTCCAAATTTCAGTGT
CGAGAATAGAGAATAGTGTAGTTAGGATAAAGTTCAGGGAATTTCCCTCA
CCAATGCCGATTTTACCTGCTATAAGCACTGACTTTTATGAACCCTGGAC
TAAGCTATATTTGCAATCCTTGagcgaaatatttttgaaagttttaatta
caAACTTAAGCTTGAACTTCTTTACATTACCACAAGTCCTTGAGGGAAGT
AGATCTAGTGCTCGCGATGCATTTACATCACTATTGAGTTGTTTGCTACC
GCTAGGAGGGTACCTTTCTAAACAAAAGCCGATCAAGGATTTTGGTTAGC
TGGGATTGGGAAATTACCTTTCCGGAGTGTAAATCTCAGTGGTTCTTGGA
AGGGGTTCTCAACAGGTCTGACACGGGATTGGTTCACCATTTCATTATTC
TAATAAGTGATTTTTAACAGGGCTGAATACGGTGCTTTGTATAAAATGCT
TTGATAATACCACTGACCGAGTGTTTTTTGTGACTTGGATAAATGCCAAT
AGACagtacttgaaaaaaaaatatagtcATTCCATAATGAGCTAATCTTC
GCTAATCACTCTAAAACATCTTAACGTTTGAGAAATACATAATTAAAACG
TAAAGAAAGGGGCATTGATAGCCATTAATTTGATGATCCCTCGTTTAACG
TTTTGTATGTTTGGGATTAAGGAAAAGTTATTCATTAGATTATTAAACAA
AATTGTTTGAGTCGGATTAATGTTGGTATTGGATTAAAGGTGGGCATTAC
AAGGACCATATTAGCCGAATTGGCTATCGTGTACATTTTGTTGTGAGGTT
TTATACTATAAGAGAGCATTTTTTGTGGAGTGAATTGAgaaattggtcag
aaaaagaTTGGATGGGTGTCAATACAAAGGAGTTTTTAGcaatgaatata
atttcaactttaaagtTAAGTAAATCATGTTTGATGAGGACTCAGCTTTT
ATTGCCTTAGTACTTTGATTTAGGTTAAATCATAAGTAAGGATAGTAGTA
GAGTAGAAtttttaaagtagaattttacGACATTTTACGACCCTACGAct
tgtaaaaatttgaattttttctaacaagttagatcattttgtatgtagct
gatgattgtacgcAAGAAACTAAAAGTACTAcacaaaaatgaagttttga
atttttgttttattataaggctccttctggtagagcactttgttgttgtt
gttgacacCCTGTTGACAACCATTTtcgtaccgtgaaaagcacagctcaa
aatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNaatatggtaatatttgctcttcatcttt
gattttttctacagtgattagattgacacatgcgcgataaaatttatatt
atttgtcttcagaggttactaatttctttgaaaacttaacctctgatact
cagggtaccatTTTCGTCTTATTTGATAGTACTTATTTGAACTCTACTAC
TCTACAGTAGTAGAGTTCTGAATTTTGGTCAAACATTGGTAGAATCCAGC
CTGACCCAGACGGGCAAGGCTTCTTTCTCGACCCTGttctgaattttcaa
atttttccgcAAAATCCGGGAATTTAACTAACGCCAACTTGTCCTCTGGC
TTTTGAAGTTCCACTTAAAGTTAAATATGCTTAATTTAAGCCTCTAAATT
GCGATTGCTACACTTCATATTTATAAGCAAAAAGGTTAATCAATGATTGT
CAAAAACATGACACGTGGTTTGAGGATAACATTAGATATTTGGAACTGAC
TGAGTTCATTCGATGCTGTAGGTTTTTAAACTGCTaatcaaatttagaaa
aaatatgtGATGTGCATAGTACGTGTTGTTCAAGAGGCTAGGTATTTTAT
ATGACGTTTAATGATGATCAGTTTATGAAATTAGATTTagtgaaaatctt
tcaaaacaatcTTATCATAATTTTCGAGTGACATAAAATTGTTTATCTTT
AGTCGATGTTAAGTTTAGAACCTAGCCGCATAAACTATGCCAGGTTCAGA
TTATGTTTTtaatcaagaaaaatttttttccgatttttccaGTTGTtagg
aaaatttagaaaaagtcagaaagtttatGCCACCAGGTGCTTCCTTCCTC
GGTTGTTAGTTTTAACATGTCATCTCTGTTCCTTTAGAtgataaattttt
tcaaattgtttcaggGCGGTAAATTATAAAGATTTGAATGCGACAAAAAT
GCCTGGTAAATCGAAAAGCAGCTCAACTAAAGAAAAGCAATCTTCAAGAT
CTCTTTCTTCCTTCTTCGGGTTCAGTAAACGGAACAAGAAAAGTGACGGT
ACCGAAAAACACGGTgagaataataataattatgaaaGACAGTTTTCGGA
GCCAGCAAAAAGACCAATCGAAAATCCTTCAAATAAGAACTTTTACTCTC
TCGATCGTAAGCTTTTGAATCgtaagaataaaaagaaatcttctaaCGAT
AAAAATGAAGTAATAAGAAAATATGACTTGACAACGAATTCTGGTCCTCA
AAATACACGTTGCAATGGAATTGAAAATGGTAGTTCAAGTAGCGACGAAC
CCTCCAATCACATTTCAGCACGTGGTCTAAAAAACCATATACAAGAGTGT
AAATGTGAGAATGGGGAAAAAGAAAGGCTTGAGAAACTGAACGGTAGAAA
CTTGTTAACGAATTTACAACTGAAGCTAAATGGAAGTAAGGCTGTTAAAA
ATGTTGACAAAATGATAAATAGGAAGCTATCATCGACAGCCAATCGTCAG
GAGCAGGGACTGGAAACCAATCTCACTCCAGTACAGTCGGTCCCAAACTT
CCGGAAGATAAGCACAACAACGAAAACCATAGTtttgaacagtagtttta
cttCAAGTCCACAACTCCAAAGATGTTTAAAAGAAAACCGTTTCCATCGA
CAACATAGTGTCGTTGCAGTTGGTCGGGGCAACGACGAAGGTCGTCGGCG
AAACGACCATCCTCGTAAATACTCGCTACCTCAACGAAAGATGTCGGTGG
AACTCAATTACAAGAATATTCGTAAAGCAAGCCCCattgttttgaagaaa
ttcaaCAGCCCAGCTATAGAGCAGGTCAAGCTGTTTAATATCGGTCTCCA
TCTTAGAACATTACAAAATTCTTCAGAAAGCGACTCTGAACAAGAAAATT
CAANGGGTCAAGCTGTTTGATATCGGTCCCCATCTTAGAACAATACAAAA
TTCTTCAGAAAGTGACTCTGAACAAGAAAATTCAACACATACACAAAGTC
AAGACGATAAAAAACTTTCACCAGAGTTTCCTACCAATGAAGGTTCGAAC
GACGATATGAGCGATTCTCGGGTCAATGAAAACCTAAACGAACATGAAAA
TGAAGACAAGATTGAAAGTGGTCAAATAGAGCAGATAATTGAGatgaaag
taaaagaaaaagtcaaatatAAGCGAAGTAGCAATGCTTTATTAGTGAAT
GATAGCAAAACTGGTGATCTATCTCCCGGTTTATTGGATGATGAGGAAAA
AGTTGAGCAAACAAAGATTGGTTCAATGAAAATAACTGCAAACGAAAATT
GCAAGGAAATTAAAGATTCATCTTCAATAGGAATTTCTCTTGGCAGCACC
GATGATTCTTCTATTTGTGAAAACAATGACACTTCATGTCATCCAAAATC
AACTGAAGGTCAGCTTACCCCAGTGACGAAACATTTTCATCTCAAAGACT
TGGAAATATTGGTAACTGTAGGTACGTATATGCTAAATTCTACTTTCCTC
ACCCtaagttttgttttctttttttcttcaccccTGTACCCTAGTGACCA
GGTGAAAATCTCAACCCCAGTCAAAATCGCATTGATTAGGGTAAGCcagt
caaaataaaaacatgctagTGAATCATAAACCAGACACTCAAATGCTTTT
TGTAACGAAAAGTCTTTCTCTACCCCGgtgaaaaaatcaagttaaaactt
cTCCCCCAGTCAGTCTCAAATTCAAGGCCGGTAATATTCATATTCATATT
TTTAATTAGCCAACCCAGTACCGTGTTATTGAGACAGAAGTGTTTTCTTG
CATGCCCCTTTCTTCAACAGTTcttatttttggttttgaaagtCCAATTT
TACTGTTAAATTAGATCTCGAGAAAGTATTCAACCCTGATCGACCTGAAA
TTATAATGTCTTATAAATAACTATCATCTTAGGAACTGGAACATTTGGTC
GCGTTTTTCTTGTTGAAGATCGTTCACAACAACAACGAGAAGGAGAGAAA
ACAACTGAAAAACCTTATGCGATGAAAGTGATGAAAATACAAGATATCAT
ACGTCTTGATCAAATAGAGCATGTGAATAGCGAAAAAAAGATATTGGAGC
TTGTGAACCACCCATTCATCGTGCAATGGTGAGTTGGCATTACCTTTGTA
TGTTTTACTTGAGTAGTCTAAATCCCTAATTTGCctagagatgaatcttc
aacCCTTTCTCAAGCACGAAACAGTAAAGCCCTAAAGTTTGCCCTGTATT
TGGAATACATAACGGATTGAAACCAGCGCTTTCTTTGTTCTCGCCCggca
tatttaaaaaaataaatctagCTATGGATCTTTCGATatggcgtttgtgt
gaaaaccacgcggcTCACGCATTTTGtgctttaaattttttagaCTGTAT
CTTATCGCGTCAATAAGACAAgagtatttttaaaaatttagcaCTAGTTG
AAATTTAAGAGAGAAGAGATTTTTGGTAAAGAAAACTGAAGGGCATTATT
ATACAAATTATCCGCCCCTCGATAGTTATTTCATATCTATAAAACGTATT
ATAAACGACTCTTGCTTGTCGAGATGGTAAGGCAGAGATTGAGTCTGGAA
CATATGAAGACGcgacttttttgtttcaaatcaCTCCATacgtttttctt
cttttttcagtcATTTTACAGCTCGTGACGACAAGTGTTTATACATGTTA
TTCGAATACGTGGCCGGTGGTGAATTGTTCACTTATCTCCGTAATAAAGG
ACGTTTCACACCTGAAGATACCAAGTTTTACATTAGTGAGATAATAAGCG
TACTTGGTTACTTGCACGAAATGAGTATTGCTTACCGAGATCTGAAACCT
GAGAATCTACTCCTTGACCATGAAGGACATTTGAAATTCACAGATTTTGG
TTTTGCTAAAGTTGTTGAAGATATGTAAGTGTACTATATTTCACAGATCT
GATTAAAGTTGTGATATCGTTATCTATCTCGTTCTATTAAAAACAAGCTC
TATTGTGTTTTGTGATGCAGAAAATATGAGGGTCTTACATATTCTTCATT
GAACAACCTGCTGATCAATGATTATTGTATCGAGTTCTATGTGAAGTGCC
TTGTAAGCTCTTTTACACTGCTCCGATTTTAACGCACTGGTTCAGCAAGA
ACCGAGCCACCAAGATAGTATCtatacaccctcttctcacagactcgatg
agattttatcagccagtaaAAATAACGGTCtcaaactcgatggggattga
tagtCCCATGTTTctaatggctggggatttgaattcaattgttttctagc
caaaaAATGAGTGAAAAGATAGTACAATACTTTGCTGTGGGGATTTGCTC
ATCTGATTTATTTTCAGTGGgtacaaaaattagagtataattttccactg
gagacaatattttcgacaatttttccagtgggtctttAAGAAGGGGATGT
ACCTATCGTCTCTTTATCTTATCATGAGGTAACTTGCCTGAGATAAGGAC
CTAAATCTTGATTAAGCTATTTTCTACAAGTAGAAATGAaagttcttctt
cttctttattaGCACGTGGACGTTATGCGGTACACCAGAATATCTGTCAC
CAGAAGCAGTGCTTGGGAAAGGGTACGATGTGTCTTGTGATTGGTGGGCC
CTTGGTGTTCTTACATTCGAAATGTTGGCTGGGTAAGTAAACTGggtaca
tttttataagaacaaactatataagaacacaaggctccttaaaacaagtt
gagaacattttagaTTTTAGGGCCTTCTGGACTCTAAAAGacccattttt
tatttcttggacaaaaaaactcaaaaattggtgaaaataagaacatgtta
agaacatttttacgcTTAAaacccgaaaagttaagaacatctgaaagctt
caaaaattatggataTTCTAATAAAAAGGCGTGTAACAATAACTGCTGTT
TGGATTCAAAGATCTTATTATATCACCTTCCACTAGTGTAGATCTGAGAT
CTCCTTTCgaattcaattttttagaaTAGGACTGATTCCTATTGAAAGGA
AAGTTTGCTGAACATAACATAATCATATTTTTTTTGCAGGGAGGCACCCT
TTGTTGATTCCAATTCATTCGTGTTGTTTCAAAAGATCTTATCAGGAGTC
ATCAACTGGCCTTTGTTTCTCAAGAACACCACTGAACAGTATAAatatat
atattctttaaatttAACAGAAAATCTTGATTTAAAATACCCAACCCAGT
TTGTTCGTAAATAGGAattaaaaagcgaaaaatacTCCTTGAAAGTTATT
AGTGCGTACAGCGTCCTTTGCGTTAACTTCCCTTACATATAGATACTTGC
AATATCAAAAAACGCAATAACTTTCATGGTTTATTAACCGTTCAAATGTA
CTGTGAGATTTAAACCCTTATAAATTCAAgctaaaagaaaatttgacgTA
TGCGACGCGGAGTGATATAGGcctgaaaattttatcaaattatggACCTG
ACAAGCCTCAAAATGAACAAGCAGTAGTATTTGTTAGATTTGGAAGTTGT
TATGAACACAAAACACTTTGAATTTGTTTAGAGACTTCATCAAGCAACTA
GTGGTGGAAAGAAGTGAGCGACTTGGTCAACGTAAAGGATTGGTATGTAT
CTAAATTCTTTAAGTAGCAATAAATAGCAATATTaccacacccctgtctc
agtgagcAAATCTTTCAGTAAGCTGGGATTAAATAAAGATCTTAATGTTG
TCAATGGTgtgaaaagaaacaaagaaaaagatgatAAATGCAGGAAAGGG
GTCAGTGAAATTAATCGCAAAACCTTTTGGGGATATCTTCAAAATAGGTA
AAAATCCAGGGAAATTTGACCTTCCAAAAATGACCTCTTGAATATATACT
ATATATTATATTCTAAGAATAAGACTTCTTTGGAAGCAAGACAGGGATGC
TTTGGAAGCAAGACATTGATGTTCTTTACTTTCTTTACTTACAGGAAGGT
GCAGAAGAAGTCAAAAATCATCCAtggtttgatgacgtcatctggaaAGA
TGTAGAAAACAGACGGACAAAGGTAAGCGCTGAATGTCTATTGATCACTA
TAATAAGTTTTTAtataagggtttaaaatctaGCAAATGGCTATATTCAG
ACATCATAAAAAAGGCTGAAAATTTGGACGATCgataaaaatatattatt
ttaagACTACGAAAGAAGTTCTTTCCCATGTTACATATTTGATATATTAA
CGTGTCCAGGAAAAGATATAGGCTTAGGCTAAAATAAAATCATATAgttg
ttgattttgttttggcttttgaacaaaattacttacattttctttggaat
cattcttcttgttttttttttcagccaccAATTATTCCAAAATTGGCCTT
CAATAGTGACACCAGTAATTTCGATGACTTTGATGAAACTTTCGAGATAA
ATTCAGGACCAGATATCCCACAAAACATCAAACATAAATTCAAAAACTGG
CACTATGAAGAATAAGCGTTgtgaaaagatttgaaaaacgCAAAATATTT
TACGATGCTTGATACTTGTCAATTTGTCGACTCCAGACggaaaattcagt
ttttttgtacaaaatttaatatttatttCTGCATAATAAAATACAAGACT
ATTTACTAAAATTATATACTAATAAAAAACGGAAAATTGCTATTACTATA
AATATTCTAGGATGATCTAAAAAAGGAGGATTTATATTCTTATTCTAGAT
TCTTAGAATTCAAACCAACTTTTGATTCAGTGCTGAGTTCAGATGAACGA
TGTTATAGTTTGTTATCCTCCTGTGCCTTGATTTCAAAGATtgtaaatca
aaaaacaaaaacgtctAACATGGTAAACCACTCGGTTTTTAAGGTATCTT
CGTGTCTCCTTTCCTATTTTATCTTGCCTACCTTTTATTTTGAATGATAT
GAATGACTATTCATCCCAACGAATCGAttccaagcctttgtaaacttTTT
TAACAAGTTTCAACTATAGTCAGAAAATTAGAATACTACCCCTTAAGAGT
GCATATCTTGATGCGAACTAGTATTCCAGCAGCTTCATTTTAGTCAAGCT
AAATGGTTCTTTGGTAGATACTGGTGTACGCTGGTGTATATATCAACTAC
CAGATGGAAGTCTTATTCTGAGGGTTCATTGTACTAGTAGCAGAGCATTT
GAAAGCTTTTGCAAACTCTACCGAATTGCTCATCGTCCCGGTAATCCTGT
AATGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005545-exon-sc0000054-1491911889:68167..68201 | TCONS_00005545-exon-sc0000054-1491911889:68167..68201 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:68167..68201 | TCONS_00005545-exon-sc0000054-1510915933:68167..68201 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:68167..68201 | TCONS_00005545-exon-sc0000054-1575043694:68167..68201 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:77277..77540 | TCONS_00005545-exon-sc0000054-1491911889:77277..77540 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:77277..77540 | TCONS_00005545-exon-sc0000054-1510915933:77277..77540 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:77277..77540 | TCONS_00005545-exon-sc0000054-1575043694:77277..77540 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:78179..78298 | TCONS_00005545-exon-sc0000054-1491911889:78179..78298 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:78179..78298 | TCONS_00005545-exon-sc0000054-1510915933:78179..78298 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:78179..78298 | TCONS_00005545-exon-sc0000054-1575043694:78179..78298 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:78706..78804 | TCONS_00005545-exon-sc0000054-1491911889:78706..78804 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:78706..78804 | TCONS_00005545-exon-sc0000054-1510915933:78706..78804 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:78706..78804 | TCONS_00005545-exon-sc0000054-1575043694:78706..78804 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:79198..79258 | TCONS_00005545-exon-sc0000054-1491911889:79198..79258 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:79198..79258 | TCONS_00005545-exon-sc0000054-1510915933:79198..79258 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:79198..79258 | TCONS_00005545-exon-sc0000054-1575043694:79198..79258 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:79611..79688 | TCONS_00005545-exon-sc0000054-1491911889:79611..79688 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:79611..79688 | TCONS_00005545-exon-sc0000054-1510915933:79611..79688 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:79611..79688 | TCONS_00005545-exon-sc0000054-1575043694:79611..79688 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1491911889:79991..80872 | TCONS_00005545-exon-sc0000054-1491911889:79991..80872 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1510915933:79991..80872 | TCONS_00005545-exon-sc0000054-1510915933:79991..80872 | Clytia hemisphaerica | exon |
| TCONS_00005545-exon-sc0000054-1575043694:79991..80872 | TCONS_00005545-exon-sc0000054-1575043694:79991..80872 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000054 | supercontig | sc0000054:68167..80872 + |
Blast
BLAST of TCONS_00005545 vs. Swiss-Prot (Human)
Match: PRKX (cAMP-dependent protein kinase catalytic subunit PRKX OS=Homo sapiens GN=PRKX PE=1 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.822e-75 Identity = 119/213 (55.87%), Postives = 150/213 (70.42%), Query Frame = 1
Query: 43 TARDDKCLYMLFEYVAGGELFTYLRNKGRFTPEDTKFYISEIISVLGYLHEMSIAYRDLKPENLLLDHEGHLKFTDFGFAKVVEDITWTLCGTPEYLSPEAVLGKGYDVSCDWWALGVLTFEMLAGEAPFVDSNSFVLFQKILSGVINWPLFLKNTTEQDFIKQLVVERSERLGQRKGLEGAEEVKNHPWFDDVIWKDVENRRTKPPIIPKLA 681
T D++ LYML EYV GGELF+YLRN+GRF+ FY +EII + YLH I YRDLKPEN+LLD +GH+K TDFGFAK + D TWTLCGTPEYL+PE + KG+ + DWWALG+L FEML+G PF D N F ++QKIL+G I++P L + K LVV+R+ RLG K GA +VK+H WF V W+ V R+ KPPI+PK+A
Sbjct: 115 TWHDERFLYMLMEYVPGGELFSYLRNRGRFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRDGHIKLTDFGFAKKLVDRTWTLCGTPEYLAPEVIQSKGHGRAVDWWALGILIFEMLSGFPPFFDDNPFGIYQKILAGKIDFPRHLDFHVKDLIKKLLVVDRTRRLGNMKN--GANDVKHHRWFRSVDWEAVPQRKLKPPIVPKIA 325
The following BLAST results are available for this feature:
|
