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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005538 ID=TCONS_00005538|Name=TCONS_00005538|organism=Clytia hemisphaerica|type=transcript|length=1395bp
caaaattgaaacagataaaatataaatacaaaaataataaatctgAAACA
TTTCTCCATAACCTCCCAGTACAAATTAAAGACAAACTTTTTCGTCGACG
CCCACATTTTAGGCcagtatttgaacctgtacaggTAAAAATATGCTGCC
AGTTTTAATGTGATACAAAACAACAGCGTGACAGAAGGGTAGCAAAAGTT
TACAATACCCTCCCCCGGCCCTAGCAGCAGAGATTTTCGGGTCGCCAAAA
GGCTCCTCTTATCGTTAATTTCGGCGCCactttactttttaaaattctaa
aaatgagcagttttagaaaataaagtAGACTGCTGATAATCCACTGGATT
CATGCTCCTATACTATCTGCCAGGTCTGTGAATCAGATTATACAAACAAA
GCGGAATAATTATCCACGAATTTCCTTGGTTGCGCCTGTCCGacattata
tataatttttcttgtttttattctaCCCAATAGGCCTGCTCATATATTCA
GTCACGAGCAACCCTTGCCTCGTGCTCAAAATTTGCTATGTAAATTGATT
CCTAGAGAAGTTCATGAAAAGTTCCATCTATTTATAAAATTAGCATTGAA
GACTCAAATGATTTGATCACATTTGGTGATGGTTTCAAAACAAGGCAGTA
GTTGccaatgaagtaaaagcccgaaggactaaaAGCGAATCTCCTACGAA
GCATTTGAAGTCACTAAATTCTACTTGAGTTGCACGGTCTTTTGCGGCCC
GCTGGGTTTTTATACAAAtaccagattgaaagtaaaatttgccgatagat
ttcaaaatatataccactcgaaaacaagtaaacaactaaattcaatccgt
cgtGCGAAAATAACGGCGTATATCTTTTAAGACTtcgctttttcttgcct
gagaaaggtttaaaattcgcttctagcccttcgggcttttactTCATTGT
TCGTTAcagccaaaaaataatttatgagaAGGCCTAAAGTCACTTGCAAA
CAATCAGCTGTGATAAAAATCATATAATGTCAGAAGTCAATcagtggctg
cgtttagaccaactggcatttgtaatttggcatttgctcatgagggattc
gattttaatagcttttccattgtattttctgtcatggcatttaaggaatc
gtctttttagagtcattactgaaaaggtgattccctgaagttcaactttg
acagatcaaacaatgaaaagcatggaatttccttaaaactgcagtcatta
agactgaaactttttgccgtataGCCtactatggcaaatcttgcaaattt
tttctctttgttttggttcctttgtttgatttgaaatgccagaaaagggg
attcctttgctcaaaatggcatttcaaatgccaacgaaatgccaa Run BLAST on NCBI transcript from alignment at sc0000053:706382..707776 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005538 ID=TCONS_00005538|Name=TCONS_00005538|organism=Clytia hemisphaerica|type=transcript|length=1395bp|location=Sequence derived from alignment at sc0000053:706382..707776 (Clytia hemisphaerica)
ttggcatttcgttggcatttgaaatgccattttgagcaaaggaatcccct
tttctggcatttcaaatcaaacaaaggaaccaaaacaaagagaaaaaatt
tgcaagatttgccatagtaGGCtatacggcaaaaagtttcagtcttaatg
actgcagttttaaggaaattccatgcttttcattgtttgatctgtcaaag
ttgaacttcagggaatcaccttttcagtaatgactctaaaaagacgattc
cttaaatgccatgacagaaaatacaatggaaaagctattaaaatcgaatc
cctcatgagcaaatgccaaattacaaatgccagttggtctaaacgcagcc
actgATTGACTTCTGACATTATATGATTTTTATCACAGCTGATTGTTTGC
AAGTGACTTTAGGCCTtctcataaattattttttggctgTAACGAACAAT
GAagtaaaagcccgaagggctagaagcgaattttaaacctttctcaggca
agaaaaagcgaAGTCTTAAAAGATATACGCCGTTATTTTCGCacgacgga
ttgaatttagttgtttacttgttttcgagtggtatatattttgaaatcta
tcggcaaattttactttcaatctggtaTTTGTATAAAAACCCAGCGGGCC
GCAAAAGACCGTGCAACTCAAGTAGAATTTAGTGACTTCAAATGCTTCGT
AGGAGATTCGCTtttagtccttcgggcttttacttcattggCAACTACTG
CCTTGTTTTGAAACCATCACCAAATGTGATCAAATCATTTGAGTCTTCAA
TGCTAATTTTATAAATAGATGGAACTTTTCATGAACTTCTCTAGGAATCA
ATTTACATAGCAAATTTTGAGCACGAGGCAAGGGTTGCTCGTGACTGAAT
ATATGAGCAGGCCTATTGGGtagaataaaaacaagaaaaattatatataa
tgtCGGACAGGCGCAACCAAGGAAATTCGTGGATAATTATTCCGCTTTGT
TTGTATAATCTGATTCACAGACCTGGCAGATAGTATAGGAGCATGAATCC
AGTGGATTATCAGCAGTCTactttattttctaaaactgctcatttttaga
attttaaaaagtaaagtGGCGCCGAAATTAACGATAAGAGGAGCCTTTTG
GCGACCCGAAAATCTCTGCTGCTAGGGCCGGGGGAGGGTATTGTAAACTT
TTGCTACCCTTCTGTCACGCTGTTGTTTTGTATCACATTAAAACTGGCAG
CATATTTTTAcctgtacaggttcaaatactgGCCTAAAATGTGGGCGTCG
ACGAAAAAGTTTGTCTTTAATTTGTACTGGGAGGTTATGGAGAAATGTTT
cagatttattatttttgtatttatattttatctgtttcaattttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005538-exon-sc0000053-1491911889:706382..707776 | TCONS_00005538-exon-sc0000053-1491911889:706382..707776 | Clytia hemisphaerica | exon |
| TCONS_00005538-exon-sc0000053-1510915933:706382..707776 | TCONS_00005538-exon-sc0000053-1510915933:706382..707776 | Clytia hemisphaerica | exon |
| TCONS_00005538-exon-sc0000053-1575043694:706382..707776 | TCONS_00005538-exon-sc0000053-1575043694:706382..707776 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053 | supercontig | sc0000053:706382..707776 . |
Blast
The following BLAST results are available for this feature:
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