|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005527 ID=TCONS_00005527|Name=TCONS_00005527|organism=Clytia hemisphaerica|type=transcript|length=893bp
ATCATTTTTAAGGTAAGATGACGCAATTAAACCGACAAAAAGGGGTAATA
TATTGACGTTGCAAACTATGGTTGGGTAGGGGAGAAATATCTTGTTTTTT
GAGGGACCAAAAGTATAATTCCAAGACTCCTTTCGATTAAATTATTTAAA
GAAACATATTCTTATTCTGACTACATAAGTTACATACTTAGCAAATCCAA
TATTAGTAGCTAAGTTAAATAAGGAATTTTGAAGCTGAATTCTCTGGAAA
AATAAGCAACCCCAGGCTCGGAGCCAATTTAAGGTTctctataaaaaaac
gtgtattgcatAAGATATATCAGGATGAGATGATTCATAAATTATATTTA
CGAAGGATAGTCGTTTTCTAGGAGCGTGTAGCTGTGCTTCTTATCTCAAG
TTCCAACAGGGCTCAGTTCCGTACCAGTAATGAGTTGATACcggtttttt
tgttttataacaTTCAAAACTTGAGCTTACCGCAAAGTTAAGATAAAAAA
CCTATTGCATTATGAAAAAAGAATTCGCATATCTATATTGCAGTTTTAAA
NCCtatttcattataaaaaaagaattcgcATATCTATATTgcagttttta
aataaaatagcAATCAAAGTTATAGGAAAGGGTTGTATTTAAAATCTATA
ATGCCAAGTTATAAGTTGATTAATGGGGTTTTTGAAAGCGTCACTACTCT
TGAAACATAAGTGTCTGAACAGACAGAGATCGAAACTAAAGCAAACTGGA
TTAAAATGTAGAAAGAgtgaaaatgtaaacattgaatAGAATGAAAACCC
GAGGCAAATCAATAAGATGAGCCCAGGGTTGATTGGTTGATTTCTtttag
acacccctgtctcacagcctcaATGAAACTTTTTCGTACAGCG Run BLAST on NCBI transcript from alignment at sc0000053:462695..463587 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005527 ID=TCONS_00005527|Name=TCONS_00005527|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0000053:462695..463587 (Clytia hemisphaerica)
CGCTGTACGAAAAAGTTTCATtgaggctgtgagacaggggtgtctaaaAG
AAATCAACCAATCAACCCTGGGCTCATCTTATTGATTTGCCTCGGGTTTT
CATTCTattcaatgtttacattttcacTCTTTCTACATTTTAATCCAGTT
TGCTTTAGTTTCGATCTCTGTCTGTTCAGACACTTATGTTTCAAGAGTAG
TGACGCTTTCAAAAACCCCATTAATCAACTTATAACTTGGCATTATAGAT
TTTAAATACAACCCTTTCCTATAACTTTGATTgctattttatttaaaaac
tgcAATATAGATATgcgaattctttttttataatgaaataGGNTTTAAAA
CTGCAATATAGATATGCGAATTCTTTTTTCATAATGCAATAGGTTTTTTA
TCTTAACTTTGCGGTAAGCTCAAGTTTTGAAtgttataaaacaaaaaaac
cgGTATCAACTCATTACTGGTACGGAACTGAGCCCTGTTGGAACTTGAGA
TAAGAAGCACAGCTACACGCTCCTAGAAAACGACTATCCTTCGTAAATAT
AATTTATGAATCATCTCATCCTGATATATCTTatgcaatacacgtttttt
tatagagAACCTTAAATTGGCTCCGAGCCTGGGGTTGCTTATTTTTCCAG
AGAATTCAGCTTCAAAATTCCTTATTTAACTTAGCTACTAATATTGGATT
TGCTAAGTATGTAACTTATGTAGTCAGAATAAGAATATGTTTCTTTAAAT
AATTTAATCGAAAGGAGTCTTGGAATTATACTTTTGGTCCCTCAAAAAAC
AAGATATTTCTCCCCTACCCAACCATAGTTTGCAACGTCAATATATTACC
CCTTTTTGTCGGTTTAATTGCGTCATCTTACCTTAAAAATGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005527-exon-sc0000053-1491911889:462695..463587 | TCONS_00005527-exon-sc0000053-1491911889:462695..463587 | Clytia hemisphaerica | exon |
| TCONS_00005527-exon-sc0000053-1510915933:462695..463587 | TCONS_00005527-exon-sc0000053-1510915933:462695..463587 | Clytia hemisphaerica | exon |
| TCONS_00005527-exon-sc0000053-1575043694:462695..463587 | TCONS_00005527-exon-sc0000053-1575043694:462695..463587 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000053 | supercontig | sc0000053:462695..463587 . |
Blast
The following BLAST results are available for this feature:
|
