TCONS_00005497 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005497
Unique NameTCONS_00005497
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1425

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005497 ID=TCONS_00005497|Name=TCONS_00005497|organism=Clytia hemisphaerica|type=transcript|length=1425bp
aaaaaatcaaaatactcATGCAAGTAACAtaagatattttgattttataa
tgaTAATGTTTATAGGTTGGACAAAGATGTTGTTGACAATTTCAAGATTA
CAGAAGTGATTCGACAATAATTCCCAAATGGAGTTGTTGCATAATATAAA
AAGGGATTGCTACACAATATAGTtctattatataaaaaatgatAACATGA
AATTCCTGCTACTTTATTATTGTTTATTGTTGTTTCTATTGTTTGCGTGG
AGTCATGGTTTACATTTGCCATCCAAACGAGACTCGCCTTATCACAATGG
AAACAAAAAAGATGGCGTCACTAGGCGTGCAATCATACCAAAACACAATA
AGCCAAGTATATTTAACAGCACAGCAAGAGAAATAAGAAAAGCAGATCAC
GTGCACATGCCAGATTTGGAATCCAACGATCACGTGGTCAAAGGTACAGA
AGAATCTTCTTCCAAGTCATCCATCTTGGGAACAAATAATGAGCAAAGTC
AAGGAATGAGTGCGATTGTTGTCATTGGTAACAAAACACATCGAATTTCA
GGACCAATAATCTCCATGTTAATGGCTGACATCAACAAAAAAGAACAAGA
AGATGATGAGAACACAAAAAAACTTGCGAGCCAAAAGACCCTACCCATTA
AACCACAACCTAAAGTAGACTTGAAACAACACCACCAAAAACCTAGTGTA
AAATGGGCTTCAAATCAAGCTATTGATACATTTCTGAGTAAATCTTTGTC
AGATGCTAAAGCTCTTAAATTAATCAAAACTTTATTGGCACAACAAAAAT
CTTCATCGAATTTAAAGAAAGAACACTCTTCTGATCAACAATTTATAGTT
ACAGGAGGGATGAACAAGTTGAAGCAACAAGTCCAGACAAAGCATCACGC
ACCACAAAAGCAGAAAGAACCTTCTTTTGCAGTCAAACCTACAAGTTCAA
TGCTTCTACCAACTAACCCAGGACCATCTCGATTCAAAGAAGGAACTTTA
GGTCCATTGATAGGTTCACCAACTTATTGCAGGAATATCAGATCAAAACA
ACGTTGTCAACACTTGCGTGACGTTGGTTTATGTTTACCACATGACCGGC
ACCGAAGCAACATTCAATCGTTGTCAAGGAAACGATGTCAACAAACGTGT
TTGATGTGTGATCCATATTTACCATGTAGCGATTGTAATGGTTTATGTGT
CGGTTGTACAATAGaaatcgACCAACCGTCAGCTCCACAACAAACACCCA
TTCCACCCACACCCTCAACCCAACAACAATTTCAACTACCAACCCCACCA
CCACCGCCTCCAGCACCCGCCGTGTCCACCTTGACGCCCACACAAAGACC
ATCGGGTGGCTTCAAAATCGAATCTCAATTATGTTGTTGTTGCGAACCAC
CCACTCAAACACAAACTCCGGCGGC
Run BLAST on NCBI

transcript from alignment at sc0000053:570743..580704-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005497 ID=TCONS_00005497|Name=TCONS_00005497|organism=Clytia hemisphaerica|type=transcript|length=9962bp|location=Sequence derived from alignment at sc0000053:570743..580704- (Clytia hemisphaerica)
AAAAAATCAAAATACTCATGCAAGTAACATAAGATATTTTGATTTTATAA
TGATAATGTTTATAGGTTGGACAAAGATGTTGTTGACAATTTCAAGATTA
CAGAAGTGATTCGACAATAATTCCCAAATGGAGTTGTTGCATAATATAAA
AAGGGATTGCTACACAATATAGTTCTATTATATAAAAAATGATAACATGA
AATTCCTGCTACTTTATTATTGTTTATTGTTGTTTCTATTGTTTGCGTGG
AGTCATGGTTTACATTTGCCATCCAAACGAGACTCGCCTTATCACAATGG
AAACAAAAAAGATGGCGTCACTAGGCGTGCAATCATACCAAAACACAGTG
AGTTCACGCAATTTTATAAGAACACGAGGTTGAAAACTGGTCAAAACCTT
AGAACAAATTAAGAACAATCTGAGCCTCAGATCTCAGAAATTACTAAGGT
AGTACTGATTTTAGCAGATTTGAAACGCATTGATGCAAAGAAACTGAGCG
TTTTAAGAATAACGTAAGAATATATAAGAATGAAAATTTCAAAAAATTAA
GAACAAGCCTTAACCAAAATTTATTGTTTCTTATAAAAAGCGTGCAGTAT
TATCCATCTTATTTCTTTGTCATGTGTTTTATTTCCTTAAAGAATGTTCG
CATAAACTACATATTTTGTCCATAAATAATACGAAAAACTATAGGACACG
TGGCCTTGCAACATTGCCCGATGATACCGTCGTTTTGCATTCTGTACCTT
TAAGAAAAAATCCTTTCCTATTTCGTACTAAAGTCTATTCACGATAAGTG
TGCACTCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAATCTT
TATAAATTTGGTATCATTGGAAAGATNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTATCTTTCCAATGATACCAAATTTAT
AAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAATGAAAAAAGAGTGC
ACACTTATTGTGAATAGACTTTAGCGGAAATTTTCTGAAAATGAAAGAGG
AATCTTATAGTCCATGAAAAGAAATCGTATCTAAAACGATGGTTCATAGG
TAATATAAGCTTGATTTCTCTTGCATTATTTTTTAGATAAGCCAAGTATA
TTTAACAGCACAGCAAGAGAAATAAGAAAAGCAGATCACGTGCACATGCC
AGATTTGGAATCCAACGATCACGTGGTCAAAGGTACTATAAGCATGCTAT
AAGTTAACTTTGTTCGATTTTAATTTAGAAGAGCTACTAGGAGACAAATC
TTTACATAATTCGACACTCGGTGAATAAACTATGCAGTTTTTATTGGAAA
ATACAGAAGAGTCTCCATAACTCGAACCCCCAAGGGAAACACAAATTTGT
TCGAGTTATGGAGTAAAGTTTATAATAAGGCATTGTTAACTGAAGCTATA
GTCTCAGCTTATTTGAGTTAAGGAGACATTCGAGTTATAGAAGTTCGAGT
TAAAGAAACTCAACTGTAACGATATTTTGATGTTATGCTTTTTTAAGCAA
AGTAAGAGTTCTCAATGTTATGATAATTTTATAGCAATATATTTCGCAGG
TCTATAGACCTCTATGAAAAAATAGAGTTTTATGTACTGGTTTGAGAGAA
GAAAACGGGTTGAATTAAGTGAATTTAGGCTGTCTTTATACGCAGGCTTG
ACTGATCATTCTGATCTACAATCAGTGCCATAATATATTGGCACTTTGGG
CTAATTTACCATTTTTCGAAAATTGAAGTTCGAGCGAGAATGTCAATTTC
AAGCATTCAACCTGATTTCATCGATTGTTTCGATCTGGGGGGGGGGATTT
ATTGGTTTCTAGGCTATATTTCAAGCCTTATTGGACCATTTTTGAACTTT
TGGATCCTCACATCCTAAGGTGTTAAGTTTTAAGTCTACCCTTCCAACCT
ACTTTAGAGCACTTACAAATCGATTGTGGTTTCAAAACACCCCGGTGAAT
TTCCCTTTTTGCCTCTTAGGTACAGAAGAATCTTCTTCCAAGTCATCCAT
CTTGGGAACAAATAATGAGCAAAGTCAAGGTACACGTTTATTTAATAAGA
ACATCCAAAAAATTTTCAAACCTTTGGATGCTCTTATCTTTTTGATTTTT
CAGCCTTAAAATGTTCTTAATTTACAGTGTTGTTATAAGACGAAAAACTC
GATATCGTTTTGAGATATTTTCTAACCTTAGATTTCTATAATGCCGCTTT
GGTCAAAAATATATAATGAATATCATATGAATATGAACCAATTAAAAATA
CACAATGACAAAGATATTGGTTCATTGGGGTATGGCACTTGTTAGTGTTT
GACGCTATCGTAAAGATTGTAGTGTGTAAGATGCGACATTTGTAGGGTGA
CCTTAATTGTGATTTTCTCTTATAAATAGAAATTCTTCCTGGGCAACCCC
TGAAAAAAATGTTCCTTCACCTCCTTGTATGGACATAAAATGGAATGGCC
CGTTGGAAATCTGAGTGTACTTCTTTACCATTTTTATTTTTTCATACCAA
TAGGAATGAGTGCGATTGTTGTCATTGGTAACAAAACACATCGAATTTCA
GGACCAATAATCTCCATGTTAATGGCTGACATCAACAAAAAAGGTACCTT
AAACTTTATTTTTCTCTCGTTCAAGTTTTTTTTAAAAGTACATGTTAGAG
ACAAGAAGAGTTAAGAAAACATAGAATTACAGCAATGGCAGCAATTGGAT
TTTTAGCTCTTTTCTATGTATTGGTTTTCAATTTTTCCCAAGCATGAATC
AAAGCTTACAATACAATGAAGTTTCAAAATATAATAATTTCAAATGATAA
TTTTGGGTATTTTAACGTTTTTCAGAATTTAAAGTTCGGGCGAGAATTTC
AATTTCAGTACCTCCACTTTACTTCATATATTCCGATTTTGGAAGGATTC
AGTGGCTTCTAGGCTATTCTCAGCCCCATTAGAACAATATTGAGCGTTTG
GATCCTCAGTTGAAAATCTATGTTCCAGAACTATATAACTTATGAATCAT
TCGTGGCGTTGCAGGAAATTTCCAATCACGTACCCAGAGCCACTTGCATC
ATTTTTCAAATTTTCCTGATGAAGTGACCCTTTTCGTGATCGCTATCACA
ATCATAAACAAGACGACTTAAAGTCGAAAATTTCGCATAATATTTGAACA
TCGACGACGAGGATGCGTGAAACGTGACTCCTGCAGCATTATGCATTTTG
AATGAAGCGTTACACAAAATATACACAATGTATTGTACACACAGGTCATA
GATACCATGTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCATTCTTTTTACAT
TTTGACGGCTTATTAGCAGACGCCCACACTAAAGCTTAAAGAGCGAGCCA
ATATCTATCATCCCATTGGGAAGGAAAAGCTGGAACTTTTACTAACAAAA
CTCATAGAACACCAATCAAACTTCATCGGATAAAAAACTGTCATCATTAC
CGAGGGACCGCTGTACATTGTGCGGTGGTGTACGGTGGGGCTGGATCTAA
ATGTCCTTTGTACGGCGGTGAAAGTAGGTTAATTTGGAATCTGTTGTACT
GTACACCCCACCTTACCCACCGTAAATCACGGTACAATGACACTGTACGG
CAGTGTCTAGGCAGGGTCATTTCGATTATACAAAAATGATTGCTGAATTT
CAATTCACAATTGACATGATTTCTAAGAAATACCGTAAGATCGGGTAACT
TGCATCAGTGGAGGCTAACATGCATAGCCTTCAAATGAATGACCCGTTTG
GTCATTAAAATACAAAGTTAAATCAAAACAAAAATGGTAGGCTAGAGCTG
GAAGTGGAGTTCATTTGTTTTGAAATTTTGCTGCTTTGATTGGTCAGTCA
TTCGATGCCTATGCAATAAGTTAGCCTCCACTGATGCAAGTTACCCGACT
TCACGGTACTTGCTAAAACTGACTGTTTGTCACAACTGGTTTCACTTTTA
ACACATAACTATCTGGTGAAAAAAGGAAAAAAAATATCATACCTGTGCTG
TTTGTAGCTTTGGAGAAGAAGAGAAGAGAGGGTTTAATAATGTTGTTGTT
TGTTATGGAAAATTAACTCCTACTAACTGAGCATGATCAATTTGTTGGTG
CATTCACTAACTACACAAACATAAAATACTTAGTAGTAAACAAATATTAA
ACCTCTTTAAACACTCTACAAAGGACCAGAAAACATGATTAAAACTTATA
CAGCAGCAGCAAGTTTCAAAAGCACAAAAGCATGTGCAATAATAATCAAG
CAGCCATTTAAAAAGTTCTCACGATGAATGTCTACAAAAACTTGGTTACA
CTTCTTGCACTAGCCTAGCGTATTTTATTTATTAAGAAAAAGCCCTGTTT
TTATCACTTTTTATCTTTGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCAAACGCCCACGCCATAATTTGCGCC
CCAAAAAATGTCTCGCCACATACATACATACATACACGGAAGGCTATCGT
AATACTTTCGCTAAGCGAAATTAAAAAGCGAATTAAGGGGCTGTGCTCGA
GTTTTAGGAATTCCCCTTTTTATCAAATATTTGACAATATTAGATGGTTT
TATTCTATTTGCGTATTTTGATTGGTATGTACTGTATATAGTCAACTGTA
TTTTGAAATCTTCCACCCTCTTTCAGAACAAGAAGATGATGAGAACACAA
AAAAACTTGCGAGCCAAAAGACCCTACCCATTAAACCACAACCTAAAGTA
GACTTGAAACAACACCACCAAAAACCTAGTGTAAAATGGGCTTCAAATCA
AGCTATTGATACATTTCTGAGTAAATCTTTGTCAGATGCTAAAGCTCTTA
AATTAATCAAAACTTTATTGGCACAACAAAAATCTTCATCGAATTTAAAG
AAAGAACACTCTTCTGATCAACAATTTATAGTTACAGGAGGTATATTTTT
ACACAATATCAATTGTTCTTAGTTGATTCTTAGCCGTGAACTGATTCTAC
AGCGTGCCCCATTAAAATTTCTCTAGCTATATCGAATATTATTTTGCCTT
ACTAAAAAACTGTCTTCCCAGCTGGCACAAAACGTTGTTTCAACGCCCAT
TTAACGTTATATGGACGTTGTGAATTCGGCAATTTGATTTTTGAAGTACA
GTGGGGTTTCTATAGCGTGAACATGCAAGGGAAATACAAACTTGTTCGAG
TTAAGGAGATATTCGAGTTATAGAGATTCGTGTTAAAGAAACTCCACTGT
ATACTGTAGTAATTGAAAGAATTGAGGAATCGTAGAATTTTGATTACAAA
TCCATGTTTTAGGGATGAACAAGTTGAAGCAACAAGTCCAGACAAAGCAT
CACGCACCACAAAAGCAGAAAGAACCTTCTTTTGCAGTCAAACCTACAAG
TTCAATGCTTCTACCAACTAACCCAGGCATTATTTCATTTGTTTTTTCAT
TGATTTTAAAGCCGTCAAATTGCACCATAGGAGAATTGCTTCATTTTCGA
ACTTTGATTGAAAACTCGCTCGGACGCAAATATAGACCGGCTTTTAAGGG
CATAGAAGGGTAATGATCATTTTTTGAATAATTTTTTTTTGCTCGACCCT
TAGGACCATCTCGATTCAAAGAAGGAACTTTAGGTCCATTGATAGGTTCG
TACTTTCTTGAATTTTTCATTTTTATCAAAAGTGAACTCGGTTTGCGAAT
TTTCCTCACAAAAAGCTGTTTTTAGGGTCATTTTATCTGTATCGTTATTA
TCTATTAGGCTGGGGTTATTTATAAATAGTGTAATACAGCGATATGGGTG
TTATATGATAATACGATGGGCAAAAACCCTCCAAGGAGGGCAATGCACTT
AAACTACATCACATTTATTGTATGATACACTCTTTTTCTTTTATAAGAAC
AATGAGGCTCAAAATCACCAAAAATAAGAACAATTAAACAACAAGTCTGG
AATTTCTCAATTTCAAGCAATTTGGTAAAATTTGGGTATAAATCCTAAAA
TACCTCAATTATACCCTATAAATAAGAACAGAACAAGAACAATTTGAGGA
TAAAATAAGAGCAGTCGAGCCTCATCAAAAATTTACCGGTTCTTATAAAA
AAAGATTGTAATACAATTTTTGTAACGGGATAAAATTAGTTCGTCCCTTT
CATTATTTTTTGCTGTATGCTTTTTACTTTTTACTTTTCTATTTAGCCTA
TAAAAAAGGCATTTAACAGATGCCCAAATCCTATGAAATGGGCTAATATC
TGTAGACCATAAATCTATAAAATCTTACTTTTTTCTCTAACTAGGTTCAC
CAACTTATTGCAGGAATATCAGATCAAAACAACGTTGTCAACACTTGCGT
GACGTTGGTTTATGTTTACCACATGACCGGCACCGAAGCAACATTCAATC
GTTGTCAAGGAAACGATGTCAACAAACGTGTTTGATGTGTGATCCATATT
TACCATGTAGCGATTGTAATGGTTTATGTGTCGGTTGTACAATAGGTGAG
GCAGGTTTTTAAATAAAATTATCTGAGGCGAAAATAAAAAAATGTAGTGT
TTCCGGAATGCGGGTGAAAGAAAAAAGCTCTCATGCGGCCGGCCGTATTT
TTTTTGTTGCTATTTTCGATAACTTAATAAGATCATTGAAATAGAACTTT
CAAGATAACTCTTATGTACAAACAGTATGAATATCAATACCCTGAATACC
AATGTATCAACTACTAACGAACAAAACTTGATTTTCAAGCGGGAATATCT
AACCAAACGACGTTTGATAGCTTAAACGGTCAACTTGATTTTCTTTATGA
TACACCATATAGATAAACCATATTTTTTTTACCCGGCCGGTTTCCGGAAA
TGCTGCATTTTTTATTTTCGCCTGATTAGAGAAATTTATCGGATACTTTC
TTTCTGAGGATTCGAAAATAACATGTCTTTATGTGATATAGAATGTTAAA
TTTTTTATCTGATGGTGAATAAAAGGATAACGTTCAGTGAAAGATCCTGG
ATGGTTGCCATGGTTACTTTTGACTCTTATTGAATACACTTTGACTAAAA
ATGTTATCTGTCGTCACAGTCTATATTTTTCGTCTTTTTCTTTTTTTCAA
GAAATCGACCAACCGTCAGCTCCACAACAAACACCCATTCCACCCACACC
CTCAACCCAACAACAATTTCAACTACCAACCCCACCACCACCGCCTCCAG
CACCCGCCGTGTCCACCTTGACGCCCACACAAAGACCATCGGGTGGCTTC
AAAATCGAATCTCAATTATGTTGTTGTTGCGAACCACCCACTCAAACACA
AACTCCGGCGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003118XLOC_003118Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005497-exon-sc0000053-1575043694:580358..580704TCONS_00005497-exon-sc0000053-1575043694:580358..580704Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:578973..579068TCONS_00005497-exon-sc0000053-1575043694:578973..579068Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:578126..578185TCONS_00005497-exon-sc0000053-1575043694:578126..578185Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:577562..577651TCONS_00005497-exon-sc0000053-1575043694:577562..577651Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:573115..573378TCONS_00005497-exon-sc0000053-1575043694:573115..573378Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:572629..572742TCONS_00005497-exon-sc0000053-1575043694:572629..572742Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:572410..572451TCONS_00005497-exon-sc0000053-1575043694:572410..572451Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:571560..571760TCONS_00005497-exon-sc0000053-1575043694:571560..571760Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1575043694:570743..570953TCONS_00005497-exon-sc0000053-1575043694:570743..570953Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:580358..580704TCONS_00005497-exon-sc0000053-1510915933:580358..580704Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:578973..579068TCONS_00005497-exon-sc0000053-1510915933:578973..579068Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:578126..578185TCONS_00005497-exon-sc0000053-1510915933:578126..578185Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:577562..577651TCONS_00005497-exon-sc0000053-1510915933:577562..577651Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:573115..573378TCONS_00005497-exon-sc0000053-1510915933:573115..573378Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:572629..572742TCONS_00005497-exon-sc0000053-1510915933:572629..572742Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:572410..572451TCONS_00005497-exon-sc0000053-1510915933:572410..572451Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:571560..571760TCONS_00005497-exon-sc0000053-1510915933:571560..571760Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1510915933:570743..570953TCONS_00005497-exon-sc0000053-1510915933:570743..570953Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:580358..580704TCONS_00005497-exon-sc0000053-1491911889:580358..580704Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:578973..579068TCONS_00005497-exon-sc0000053-1491911889:578973..579068Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:578126..578185TCONS_00005497-exon-sc0000053-1491911889:578126..578185Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:577562..577651TCONS_00005497-exon-sc0000053-1491911889:577562..577651Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:573115..573378TCONS_00005497-exon-sc0000053-1491911889:573115..573378Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:572629..572742TCONS_00005497-exon-sc0000053-1491911889:572629..572742Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:572410..572451TCONS_00005497-exon-sc0000053-1491911889:572410..572451Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:571560..571760TCONS_00005497-exon-sc0000053-1491911889:571560..571760Clytia hemisphaericaexon
TCONS_00005497-exon-sc0000053-1491911889:570743..570953TCONS_00005497-exon-sc0000053-1491911889:570743..570953Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000053supercontigsc0000053:570743..580704 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0583516	0.056902	0.0330343	0.0969567	0.196726	0.217638	5.48966	6.74236	0.368788	0.83285	2.20305	0.796667	3.15472	3.25149	1.50174	5.62822	2.02344	2.97359	0.062029	0.0649089	1.59298	1.69239	1.17083	1.03404	2.98162	3.61916	0.360052	0.0853905	0.0323828	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005497 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top