TCONS_00005382 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005382
Unique NameTCONS_00005382
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005382 ID=TCONS_00005382|Name=TCONS_00005382|organism=Clytia hemisphaerica|type=transcript|length=171bp
TATATACAGATATCAGATTCGTATTCAGAAGCAACTATGTATAAAATCGG
TTATTTATAATTCCTTATACTCGCACCTTATTTTAATATTCTACAACATG
AAACGcagtttaaaattttctataaatatgatagattttcttaactttta
aaattttttaaacattatgCA
Run BLAST on NCBI

transcript from alignment at sc0000052:55756..55926

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005382 ID=TCONS_00005382|Name=TCONS_00005382|organism=Clytia hemisphaerica|type=transcript|length=171bp|location=Sequence derived from alignment at sc0000052:55756..55926 (Clytia hemisphaerica)
TGcataatgtttaaaaaattttaaaagttaagaaaatctatcatatttat
agaaaattttaaactgCGTTTCATGTTGTAGAATATTAAAATAAGGTGCG
AGTATAAGGAATTATAAATAACCGATTTTATACATAGTTGCTTCTGAATA
CGAATCTGATATCTGTATATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003056XLOC_003056Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005382-exon-sc0000052-1491911889:55756..55926TCONS_00005382-exon-sc0000052-1491911889:55756..55926Clytia hemisphaericaexon
TCONS_00005382-exon-sc0000052-1510915933:55756..55926TCONS_00005382-exon-sc0000052-1510915933:55756..55926Clytia hemisphaericaexon
TCONS_00005382-exon-sc0000052-1575043694:55756..55926TCONS_00005382-exon-sc0000052-1575043694:55756..55926Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:55756..55926 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005382 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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