TCONS_00005366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005366
Unique NameTCONS_00005366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2370

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005366 ID=TCONS_00005366|Name=TCONS_00005366|organism=Clytia hemisphaerica|type=transcript|length=2370bp
GAAAATTGATTCATTTTTGCAGAagtttttgtaattcgaacctTAATATA
TGAAGAGGAGATGTCACAGGACAAAGGATGGAGGTTAAAGATATATTAAT
GGTGTGACTTAAAGACGCTATAAAGACCCAGTGCTCATCGAAGAAAGGAC
TTAACTCAAACTGCAGACCAAACTTGAGACTGAAGAAAAACCAAAGCAAC
AGAGAAGATTCATTGCAATTTCATCTTTAAAAGATTTGGTACGAAAGACA
ATTTGACCGAAAACAAGAAATTCTCAGACATAATGGGTTGCATGAAGTTA
GGTCGAAACCCGACCTTTTATTCCATGATGTTCCTAACAACGTCATTCTT
TTTCGTCGAAATCATCGTCGGTTATATGACGAATTCCATGGCACTTGTCG
CCGACTCCTTCCATATGTTGTCTGATATCATTTCACTTTTTGTTGGCTTC
TTTGCGATGAGGTATTCGAAAATGACAAAAGGAGATGTCTTCACTTCCAA
TACATTCGGATGGGCGCGGGCAGAAGTTTTGGGCGCTTTGGTGAACAGTG
TGTTTCTGGTGGCGCTTTGTTTTTCCATTTTGGTGGAGGCGTTTAAGCGG
TTGGTGGAACCAGAAGGTTTGAATGAtcctgatttgattttgatcgtTGG
AGGAACAGGATTACTGATCAATGTCATTGGGATGTTTCTCTTCCATGGTC
ACGGTTCAGCACATGGTCACAGTCACGGTGGAGGTGGCCACGGACATTCA
CATGGTCACTCTCACCAAGAAGAAATCGCTCACGATGACGTCACTGATTT
CCAGACACCTAAGGACAAACATACTAACTTAAAATCGATCAAAGGAACCA
CTGTTGGGATACACAACATGTCTTTTGATGCTGATGAGACCATCACACCG
CGCGAGAATCACGAATTCGTCATCGCGGTTGATTTCCAAGATGGAAACGT
TGAGGAGCAAACAGACAAAGAATGTAAAAAGTCGAAGAAGTCAAAAGCAC
CCCAATCTTCACAACAGATGAACATGAGGGGTGTCTATCTTCACATCCTG
GGTGACGCCCTGGGATCGGTGATCGTCATCATTGCAGCCCTTATCATCAA
ATATTTTGAAGGGAGGTGGACCCTTTACGTTGACCCTGGTATGAGtaTTA
TCATGGTTggtattattttgaagacctcAGTACCTCTCTTGAAAGAATCA
AGTACGATTTTGTTGCAACATGTTCCTTCGCACATTCAACTCAAAACATT
ACAAGAAAAATTACTCGTAACGTTCCCAGAAATCAGAGCGGTGCACGAAT
TCCATGTTTGGCAATTGACCGGCAGCCGAATTGTTGCGTCATTACACGTT
ATGTTTACGTCATCAGATGATTACAACGAACTTTCAACCTCtatgaaaaa
attctttcataAAGAAGGAATTCATTCAACGACAGTACAACCAGAATTCA
TTGAGGACGAAGAGCACTTAGGTGACGAGAATATCTGTCTATTAGCTTGT
CCAGATGAAGAATGTgccgagaaagtttgttgcAAGCCAAAGAAATCAAA
TTCGACAGCGCCATCAGAGACCGGAAGCATCCGATCTACCGGATCCGGGA
GATCGCGGAACAGTGGGGGATGTGCTTCACCTAAAGAAGAGAGCAAATCA
AGACCGGGTTCCACGAGGTCTGAGAACAAGAGCGGTCGTAACTCTCCAGA
TGAAGAAAACGCAAGACCAAGCTCTGCAAATTCTCAAAATagcttttata
agcaaccagaaAATGATGACAAAAATACAGACTCAAACTCAGAAAGTCTC
GAAGTTGAAAATAATGACACTAGAATCGACATCCAGATTTCACCAAGAAG
TCAAACAGCTTCACCAGacattacaaaatcaaaaaacagtgagtttgaag
aaattcaaattgtgGTCGATAATAATTCTGATGAGGAAAGTCATCTGTAG
ACCAATCATATCGCTGAAAGTCATCTGTAGATCAATCATATCGCAGTTTG
GGATGAGCGCTAATTGGAGGATATTTCTTGCGTATTACACACACACGCAA
GATATATCGAACAGATCTAAATGCGGATCCAATGTGGTAAAACTGTCCAC
AACTGAACCGAAAAACAGTTTTCTGCTACTTTATTAAGTAGGACTATATG
GGATAGAAGATCATATATCACATTCTTTAGCACAAATAAGAGAAGAGATA
AATGAAGAACGCTTAgtagaaaaagtcaaaaacataagTTTTCTTAGGAC
TGAAAATTGTTTTAAACCGTGAGGCTTTTCACTGATTAAAGTTTTGtaca
tattttgattttttcattgtttttttttatttgcatGCAGTAAATTATAA
ATCATACGTTTAAGATAAga
Run BLAST on NCBI

transcript from alignment at sc0000052:712724..726530-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005366 ID=TCONS_00005366|Name=TCONS_00005366|organism=Clytia hemisphaerica|type=transcript|length=13807bp|location=Sequence derived from alignment at sc0000052:712724..726530- (Clytia hemisphaerica)
GAAAATTGATTCATTTTTGCAGAAGTTTTTGTAATTCGAACCTTAATATA
TGAAGAGGAGATGTCACAGGACAAAGGATGGTAAGACTGATGAGTCAGTA
GAAAGTATTTAGGTTTGCGTAGGTCTTTGTTTTCTTGGAAATGATTTTAG
CTGAAAGACATCCTGAAAGTAGTTAGTAGGGTAACGGGTGCAACAGTAAT
CATGTGATCCTTAAGGCTTGGAGACACGAGAAGTTTTTTTCGCGTTGGTG
CAATGCAACTAGACTATGCTATAGTCTAAGACGAATCACTATCTAAGAAA
AAAGCCCAAAGCTGAAGAAAATTCGTAAACGGGTTTTTTTGCCGAAAAGA
GTTTACAGTCGTTTCTTCGAAACTCTACCGCCGATTTTTTTCCGTATACC
GCCATAACGCCATCCGCCATATTTTCCCGCCTTTACTATAACATCGTCTA
CAATGCAACATGCTCTATCCCACCAACACAAGAGAAAAAGTCCGTGTCTC
ATGGTTTTAGCTGAAAGACATCCTGAAAGTGGTTAATAGGGTAACGGGCG
CAATAGTTGAGTAACATCATCATGTGACCCTTAAGGCTTGGAGACACGAG
AAGTTTCTTTCGCGTTGGTGCAATGCAACATGCTCTATCCCACCAACACA
AGAGAAAAAGCCCGTGTCTCATGGTTTCTTTTTTTGCCCCTGGGACAAAA
GTGAGAGAAGCGAGAAAGGTTGGTGGGATGGAGCATGTTGCATTGCACCA
ACTCGAAAGAAGCTTCTTGTGTCCCCAAGCCTTTAAAGGTTTTATGGCCC
CAAACTAAGCTAGAACAGAGATTCTTGTGGCATCAATATCATATTTTTTG
TCTTCAATCTACAGGCTGCTTCACATAATTTTCTATCGATGAAACTGTGA
TCTCTCCTATCAAATAGAGAATAGATTTTAGCGAAAAAAATATCCTTTAA
TGACAAAAAATGGTCACAAAATGGCCATTAGAAGATTCGAAAATGACCTC
TCCTTATTCATTTGATAGATTTTGTATCCTTATCTAGTTTGGAGAGACCT
TTTGAAGGCCGAATAATGGACCGTAAGTTCTGCGCATGCTCAGCACCTAT
TATACCCCCCCCCCTTCTTCTAACCGCCGTGCTTAAAGGCAAGAGCTCTA
TTAACAGAGGTTTACTCAAACATTTTGCACACGAGTTTTTTTCTTTTGCA
CTCTTCTTTTCAAAACAAGAAGTAATAATTCATTTAACTCACAGCTACTT
AGCGAGATGATTTCTACAAGCGATTTCTCTAAAATTGGCATCAATTTTTT
GCAAGCCTCCCTTAAATCTGTGGAAAATCTTTAATTTGATTCATTGGAAA
TAAATTGCCCGAACAATTTCATGTCTTTAATAATATAACGTCAAAGTAAA
GCAGATTTTGTATTTTTTGCAAACGGTTCAAAACTTTGGAGGAGAAAATC
TTTGACACACTGTTACTCATTGATACTTGGGAAGTAGGTCTCAAAAATAA
ACTTGACCACAAAAATCAACATACAAAAACAAATTTAGACCATACATACC
TGTCACCTATTGCTGAAACCTTTCTATCACGTTTGGAGAATCATGACGTC
ATATTTGGGATTCTGAGAATCATATAGTCCAAGATTGATTTATCAATGAG
GACCCCCCCCCTAGAGGACCTTCAATTCATGCATTCACGCAATGTTTTAT
CACGCATTCACACAAGTGAGAAAGTACATTCACACATTCACGCAAACCAC
TGCGCCGTCAATGCTTCTTACGAAAACGTGGGTACCATATTTTAGATTTC
CATAAATCTAGAACGCAAGCGTACTAAAAGTAAAACTTGCCAGTCGTTGC
GTTTTTAATCCCTCTTAAAGTTTGCGCTATCACTGATCGATTTTTTTGTA
TAGTAAAACATCAATAGATTTCTTTCGAATTACATAATTCTTTCCAATAG
TATTAAAAATTGTCCCTCTAAAAGTCTGGAAACAAGATGATTCATACCAA
ATTTTCGTAGTAATAACCTTTGAGTACGTAGGGGATAATGGGGCCAATGT
ATTTTCCGGCCTTTAAGAGTTCTTTTTCACCTTTGAGATTGCGCTAAGAG
TTGAAAAAAAAATCTTATCTAAGTCCATCTCAAGGTTTACAAGGAGGAAA
AAGGCATTCGCCCTTCAATTGGAAAACAGTAGTCAACCCGGATTAATATA
CAACGAATAGAAAAAAAGAAAGTTTTATTTCTTAAGTAGAAACGTGATTC
AACCGCATACTTCAATATCTCAAACCATTCAAAACATTAAACACTGTGAA
AAGTTAAGCTTCCCTTCAAATGGAAACACAGTCCCGTGTGATAAGTGCAA
AAATCACGATGTAATGGTTACGATTGCGTCCACCCTTCACGGAAAAAACA
ACATTGGAACAACGGGCATTCCCCGATAGACTTTTTCATCACCAACTCAG
AATCAAGATCAATAGATAATTCGTTCGCCTTTTTAAAAATGAAAATTAGT
GAAGTTTCTTATCATTCAAATCCGTCACTCACAATTTTGGATCGAATTTC
GAAAATTTTGACGCCGGGTGACGGCTGACGAAAATTTTTTAATGCTGTGT
GACACACTCCGTCAAAAAGGTTGTTACCCTTTGGGCTGATTTACCGATTC
TATAGAGTCAAAAAAAGTCATTTGAGTGTTTTAGCTGCAATAACATTTGT
CTCGTGTGCCGAACACATGCAGCTATTCCAAGCTTTTTCCTTTCACTTTG
TTTCGAGAGTATTCCTTCCGTATGCCATTGGTCTTATGGTTGTGATGAGT
CGGGTGCAGAAGATAAGGCCATGCTTAACATCTGATGTTAAGTATCTCTG
CCATCAATCCCATCAATAGACTATTCATCTAACGTTTCCAGACAATCTAA
AAAGAACGACAAATAATTATTATAAAGCCACAAAAAAACGACAAACCCTA
ACCCTGACCCAAACTATCAAAGAACGACATATTACCACCCCTACATACTC
ATTACTTTTTGTACTTTACGCTATTTAACAACGGAGAAGTTTAAAGAATA
ACAAGAAAGCCTAAGCGGCGTAAAGGCCCAGCAGTGTTGGCAGTGTCAAC
ATATTTTTTTGTTGCAGAGTTGCAATACAAATTTACAGGAGTAAATCTTT
TCGACCAGTTGCGTTTTAAAGGCCCATACCGTTGCGCGCTTTGCCAATAA
ACTACGCATGCGTATAAGTCTCTATTTGGGTGAGCTAGAAACATTATATG
AACTAACTCTCAAGATTCAGTACTCAAATTTGGGTAAAAATTTCACATAT
TTCACAAACTCTACAAAAAGTATTTCTCTGGGCTGGGGATTACTCGCATC
TATTGTTTCTCAGATGAATCGTCAGAAATATAATGAGAAAACAAAGATTT
GACTGTTTTCGTTACAGTTGTGCTAGTCCCGTGTGCAGAACACATAGTTC
AAACGTTTTCTTTAGCTCTGTTTTGAGAGATGTCCTTCCGTATGCCATTG
GTCTCTTCTCAGCAACAGTGATATTTTTTGCACTCATCTCATCTTGGAAT
GTTTATTTAGTATCATCAATGACAGGCTGAAGTATATAGCACTCCACTTG
GAACTGAAGTTTGAATGAAAAGGTTAAGCGAAAGCAAAACTGGTTCCTTT
GATAATTGGATAGAGGTGGAGCAGTTTGTTTGCGAAGATTTATTTAAAGA
CAACAATTTTCGATTGATTGACCATTCGTAGGCTAAAGTTTTTGTGTTTT
AATTCAAAATGCCGAAGGAAATCAAGATGATGATTCAATCTTTCCGAGCT
TGAAAGCTCCGAACACTTATGCTTTTGCGCTGTAGTTTAGTGTGACAGGT
ATCAGGTGTCTTTGTTTTAGAGCACGTGCAATTTTTTTAACTGATCAAGT
TCTCTTTTTCCCTGAGTCGAAAAAAATGAATTGTCAGGAGATCTTTCTAA
AAACCCAATGGGCGAATGCTAGGCTATCATGGTGCACAGTAAAATACGTT
GGCATATTTTTTAATCTACGTTTTCGTTAAAGTCACACAGACCACGAGGG
AAGAACGCTTTGGTGCTAACTTTGCAAGTGCTTCAGGCCCGGATTTTTCC
TTTCGCTTGAATATTGACAAGTTCCGTTACTTTTTGTGTTGAATCTTTAA
TGTTCTCCTTTTTGAAATGGTACTTTTGGTCGCAGGTCATATAGAAATAT
GAAATAGGACCTTTAGAAGATGAATACACTATGGCACTTCCCTTAGCTTT
TTAAAGGGTTGTCCGGGAGAACTGGACCTTCGATTGATAATACAGTACAT
TTAACGTAAGCACTTCCTGGTGAGACACGACCGCTTGAGGATTCTTGTCT
CCAAAACTTTATACAAAGAGGAATGTTTGTAAAAGTTATTTATTTACGCC
TGTCGGTGGTGTGTCGAAGGCTTGATTTCAATTTTATATTTGCCTGTCCT
ATTTCTTGTTTTATTTAGGCTACTTGTATCTTTAGATGATCAGTTTGAAA
TTAGAATTACGCATTTCATCTTTTATCGTGGATTTTTTAAATTTCACCAA
GTAACTTAAACAAAACTGAAGGGGAAATAACGTTTCTTACTTCAGCTTTC
GTTTCAGGCCATACAGTGTTTGTACTGTAGTATGTCATGCAAAAAAGTCC
GTAGAATTTATTGACCATATTTTGGAAAGGAGACTCGTCTACTTTTGACA
GTTTCCCTTTTGACAACATTCAGGTTGTCATTTATCTAACCTCCGTTTTT
CACCACAAATATTTTGTTCGGCTTTTCTTTCGCTTTTGGTTTTTTTGACA
AGCAAAACATCCTGAAGGTTTTCGAGCTTTGTGTTTGAGTAAATCCTGTG
TGCAAAGATCATTGACTTCTAAGCCTGAAGGGCTAGATTCGAGAGTCCTA
GGAGGGAAATGTAGCCTACACAAACGCCGGATTGAAAGTAAAATCGATAG
CTAGATTTAAAATAATGCATTCCTCAAAAACAAAAGAGCCACTAGATACA
ATCCGTCGTCATGATTGCGATGCATTTTAGGCGCGTTCTGGATGGGCAAT
AAGTGGCTTCACTTTTTCTTGCCTGGGAAAGATTAGAGAGCTCTAGCTTT
TTAGTCCAAAATTTGCCTCACAGTTCAGACCCGTCATGTATACATCAGAT
TATCGTAAAAACACCGGACGAGTTTCCTATGTAAGTTCTTCTGGAAAGTG
CGTCTTCATTGTGTCTCATTGATTTATATTTTTTGGGGAAATTTGGTTCG
TACACCGACATTGATTTTATCTCACGTGGAGGCTTTTCAAAGAAGAATTT
GATTAAAGGAAAAATCATTTGAAAAGAAAGACAAAAAGACAAGCTATGTT
ATTTTTACTCTATCAGAAAAATATTTATAACTCGCAAAGTATTGTTACAT
TCAGTGTTGGTCAGCGGGTGGGAGTGTACCGTCATTCAAACTTTTCGAAC
TTTTTGCAGGTAACGTGTGCACAAAGTTTTAAATACGCAATTGTTGGCAA
GGGCAACAATGAATGTTGATACAAAATAATAGAAAACCGATGCAAATAGA
TTAATTCATTAATATTTGATGAAAACAACAATTTTTGATTTGTCGCGGTA
AAATCTAATTAATGAGTGCACGGGATATCTTAGACTCGATTTGAAGGATT
TGGGATTTTTTCGGAAATTCTATTTGGTTGCATTTTTTTCACAAATAGTT
TACTATTGTTGTTGTTTTTGACCGTCTTGGTCGGAACGATAGTATCAGTA
AACTACAAACAGATTACTTTCATTCCGAACCATTGAGTTTCAAGCCCGAA
GGGCTAGAGGTCAATCTCTTACCTTTCTCAGGCAAGAAAAATAGAAGCCT
TAAAATATGCGCCGTATTTTTGATGACGGATTGAATCTAGCAATTCCTTT
GTTTTCGAGTGATATATTTTTCGAAATTAAGCGGTAAATTATAGTTTCAA
TCTGTCATTTGTGTAAAAACCAGGCGAGTCGCTCAAGGCCGCGCAACTTT
GGTAGGATTTGTTGGCTTCAAATCCTACCAAAGAGATTGACCTCTAGCCC
TTCGGGCTTGAAACTCAATGTTCCGAACTCTCCGATTACTATTTTGATAG
AATAAGATACGAGATCGTCTCTGACCTTTACAGGTCAAAACTACTAAATT
TCTAGATACCCAGACAATCACAAGACCAGTTAGAATTATAGCTTCTAAAT
ACGTGATTTATCATCTGGCAGTGTTAAATGGGTTTGTTTGTCTATTATGC
TTTTTAAGTTCGATGACTGGCCCATCCTTTTGACGTTTTAGTTGACGATG
TGTCAATTTGACTTTTCACTTTTCTTTTCATCAATGTTATTTTTACACTA
TCGATTTGGCAATTATTCTTTCATCACATCGTTTAAAAGTTGGAATTTAA
TATCAAATTTGTTATTTGATCTGTTTCTGGAATGGATGAAGGCTTGGACC
ATAAACACGAGCTTGGTTTAAACCATCAAGATGGTCAAGGCAATTGTCTT
GGACTTTGTAGTCAGGGGCCGCAGCAGCGGGGGGGGGGCACCCGGGCCTT
GGTCCGACCACGTTTTTTCAAAGCAAAAGGAAAATTTACTGATTCAGTTA
AGTTTTGCGTAAAAACCTTGAAAAAGACCTGTTTTAAGCAGTCCAGAAGG
GCTAATTTTCAAAGATTTCTCCCGCCGGCGCCAACCATGGTGACACCTCC
TTAGACACTAAACCATGGCCCTACCACTTTCAAAGTGGAGCCGCGGCCCA
TGTTATTTGCATTATTTGGTAAAAATAATCGTATTATAATTGTGTTCTTA
TTGTTCTTGAAAACTCTGATATAAATTGGTGCCAGTTACCCTTGGTTCCA
AATAATGAAATTCTCAGTGAAAGAAAGAAAGCCAGGAATCGGTAACCCAT
AACTACCGTAACAACCCGTGCGGTTGCCACTGTTGTAAAGATTTATCTAT
CCGGTATTAACCTATTTCAAAGGGATTCATTTGAAATCAAGTTTGATGCA
ACGAAAGGTGCTCTATAGGAGTTAAGAAGCGATACGTGAAATCTGTATTA
TGTTATATTAGATATAACTAGGCTTACATAGACGAACGACTTTTATGAAC
TTAATTTGGTGTTTTACTCGATAAATTAGCTTTCTTCATGCAAGAATACC
CTTGCGATTACCCATACGCCCCTGTCTCAAAAACCCCGGTGGAACTTTTT
CCTCAATGGAGATAAAAATTCCTATTGAAATCCCAATGGGTATAGAAATT
CTATTGTTCAAAGGTTAAAAATTAAGTGGGATGATTTTGGAGTGCAACTT
TTAAACATTTAGTTTCGAGTGGGGATGAAAAATAAGTCAATTTCCCACTG
GGGCTANAACTTTTAAACATTTAATTTCGAGTGGGGATGAAAAATAAGTC
AATTTCCCACTGGGGCTAAAACTCCATGGTATTTTCTTACCGAGGACGAA
ATTTTCGCCAAATTTTCCAGTGGGGCTTGGGTCCCAGCGGGTCTGTGACA
CAGAGTACCCATTGGCTTAACTTAAAATGTACTCAGAGTACCTTAAATGA
CCTCACAGTATTCTAAAAACAAGTCGAAATTCTAATATTTTGCACCCGGG
ATTTTTTTACCAAAGGTTTCTTCATAGTCTGAGTAAAAAATAATTTTCCT
TAATTACCTTCAATTTTTGCACGCGCTCCTATCAGAAGCAGCCGACCAAT
CAAGAGGCAGTATGTAGACTATAAACAGGTTAAATCCATTTATCCAATTA
CGGATACTAATATTTTAGGTTTGTGGGACGAGTGCAGAAACATAGACAGC
CTGCCATTTTGATCCATCACCCAGCCGGCACACAAGATTGTTTCAACGTT
CATTTAACATGATATGGACGTTGTGAACGTTAGATAAACGTCGAAACAAC
GTTGTGTGAAGAGTATAGGGGTTTTTGTCTTTCGTGCCCGTCCTAAACAT
TAAGAAATCCAGGAGAAATTCTAAAAATCTTAAGATATATTAATGAGAGA
TGCAATCCCGTAAAGTTATTTCCTTGTGTCTGAAACAATCAATACGATGA
AGTGTTTTCACAGATTAGATAGCTCCTTATTTAGTCATTGAAGCACTCTT
TAATTGTGTGTTGTCTAAAATATAATTGGCAGGCACTCTAGTTTGAAGTA
TGTGTTTGTTTTTTTAATGAAATTCGATCGTACCCCCTGATGGGAGATTA
TTTTTCTTTCACAAATTACGTATTCTTTTCTGTTTCCAGGAGGTTAAAGA
TATATTAATGGTGTGACTTAAAGACGCTATAAAGACCCAGTGCTCATCGA
AGAAAGGACTTAACTCAAACTGCAGACCAAACTTGAGACTGAAGAAAAAC
CAAAGCAACAGAGAAGATTCATTGCAATTTCATCTTTAAAAGATTTGGTA
CGAAAGACAATTTGACCGAAAACAAGAAATTCTCAGACATAATGGGTTGC
ATGAAGTTAGGTCGAAACCCGACCTTTTATTCCATGATGTTCCTAACAAC
GTCATTCTTTTTCGTCGAAATCATCGTCGGTTATATGACGAATTCCATGG
CACTTGTCGCCGACTCCTTCCATATGTTGTCTGATATCATTTCACTTTTT
GTTGGCTTCTTTGCGATGAGGGTAAGTGTTCTTACTTGTCTAGGCCAGAA
CCGGCCGAACCGGGTAGGCTGAAAGACTTCTTCGCTATTTCATAGCTAAA
TTTAACTCATTTTTGCGTTCACCCTGGCATTTCTACAATCCAACTTACAA
AGACAAATAAAGTTTTAAACTCGAAAATCTTTTGTTTGATAACGTGTTTA
TATTATACGAATCTTTCACTTTTTATAAAAAAATCGAACCGCATTAAGTG
TGCATCAATCTTTGTTTTGCTTGCCAAGAAAATTGATTTTGAAATCCAAT
ACACCAGTTATTTTCGAGATTTGCATAGCTCCACCTCTTTTGCTTTTTTC
AGTATTCGAAAATGACAAAAGGAGATGTCTTCACTTCCAATACATTCGGA
TGGGCGCGGGCAGAAGTTTTGGGCGCTTTGGTGAACAGTGTGTTTCTGGT
GGCGCTTTGTTTTTCCATTTTGGTGGAGGCGTTTAAGCGGTTGGTGGAAC
CAGAAGGTTTGAATGATCCTGATTTGATTTTGATCGTTGGAGGAACAGGA
TTACTGATCAATGTCATTGGGATGTTTCTCTTCCATGGTGAGTTGGCTTT
TCCGTATTNGATCAATGTCATTGGGATGTTTCTCTTCCATGGTGAGTTGT
CTTTTCCGTATTCCTTTAACAAGACTCTAGTTGAACAAAACACCCAACAT
AATCGGCCTTTTTACGGCGGCTCTAATTTAGCGCCAGCCCTTTTACTCCG
GCCCTTTTTACGGCAAAATATATTTTTTTTCCATTTCAGCCTGGCCCTAA
TTTACTTCCGATCCCTTACCCCGGTCCTTATCACGCCAGAAACAAAAATT
CAAGGGCTGGCGTAAAAAAAGCCGAATGATCACTAGTCCAGATATGTTCC
GTTACCCATGAATGTCGAAACAACGTCTGCCTGGCATTCTTTTAACGTTA
GATGAATAACGTAGAAACAACCTTTATGATGTGAAGGAGGTCAGAGACCT
GAAATTACTGTGTGCATCGAACACTCTTTGAAAGCCAAAGTCCTTCCACC
GGAAGTGTCTATGGTGTAGATTAAGTAGAGCAGATGCTCGCTCAGTAAAG
AATCTCTCAGCTGTTACAAGCCGAGTTTCGTACAACATTTTGCTTACACA
TCATTTCACAATCTTGTTTAGTTTAACGACTGTGATCTGCAAAAGGTTCT
TATTCATTCTCATACCTTTCTTTTATTCGGCACGTTAGGTCACGGTTCAG
CACATGGTCACAGTCACGGTGGAGGTGGCCACGGACATTCACATGGTCAC
TCTCACCAAGAAGAAATCGCTCACGATGACGTCACTGATTTCCAGACACC
TAAGGACAAACATACTAACTTAAAATCGATCAAAGGAACCACTGTTGGGA
TACACAACATGTCTTTTGATGCTGATGAGACCATCACACCGCGCGAGAAT
CACGAATTCGTCATCGCGGTTGATTTCCAAGATGGAAACGTTGAGGAGCA
AACAGGTAATTGGGAAAAATCTTTCCTTACTGTATTTTAGAAATTCGAAT
ATTACACCCAGTCGCATGAGATGCCTTGGAGTTTTTACAAGATACTTCAC
TAATTGGTCATTTAAAGTGATAGAGATGACGCGTTCTTTAGAAAANGTAG
TGGTTGAAACAAAAAGTTTGCATGTTGAGATTATTCCGTATTTTTCGACA
ACAAACATATTATCACAACTGTTTTTAAGAAACATTCAAGAAATATCCTT
ATCCCTTGTCAATCATCTTTTAGAAATGTCAATTTCTTTCGGCTGTCGAA
AGTTTTCTTCAAAGTCTAATTTACTAAAAAATTTACACGCTGAAAAGATT
GATCTTAATGAAAGAAAGCTTTGCTTCAACAAAAGCTGAGAAAGTTGCAT
GTGACTCCTTTGAAAAGTCATTATTCAACAGTTCACCAACGCACTGATTA
AATTATGCTCTCCAGTTATTTACTGATCCCCGCTTTCGGGTGATTCATCA
TTGACTACTTAACCATGTCTGCATAAAAGAGAAAGTGAATTCCCTTCCCT
TTAGCCCTTTCTCAGACCATGTTTAAACAAAAAGCCTCTGTCGAGAAAAG
AGAGTCCGGTTCTTTCAGAATCAACTTTACATTCAACCCATCTTTTTTCC
ACCTTCATTTAGACAAAGAATGTAAAAAGTCGAAGAAGTCAAAAGCACCC
CAATCTTCACAACAGATGAACATGAGGGGTGTCTATCTTCACATCCTGGG
TGACGCCCTGGGATCGGTGATCGTCATCATTGCAGCCCTTATCATCAAAT
ATTTTGAAGGGAGGTGGACCCTTTACGTTGACCCTGGTATGAGGTTAGTA
GAACGCTGTTCATTTCTACTTCTTTAAAGTCAATGTAGTTTTTACAGATA
TTTTTTCACTTGAACGTGGCTGGAGGAAAGAAGAAATTTTGGCAGTATCT
TTAGTCATATTTTTGCGGCCAACCCAAATCATATTTCGCGTACTACCAGG
TTGAAACTGATCTAATGTTTTATCTCATTAGGTAACACTTGTATCGAATA
TTCTGTCAAGCCCGTTTCTGCATCCCTTTCCCTTCCTCATGATACAGGGG
TGGACGTCCATTACGCGGTCTTCTCTTAATCACTTTTTTTTCAAATTTCA
GTATTATCATGGTTGGTATTATTTTGAAGACCTCAGTACCTCTCTGTAAG
TTTCCTTTCGTACACTTTAATAACGAAACCTTGATCATTTACAACGCCCT
TGTTGACACCTGAGTGATATACCCTCGGCGTCTTATGTATTTTAGTCAAA
ATTTAATCGTTTTCACAAATGGAAATAAAATGAACTGAAGTTGAAGAGGC
CCCCCCCCCCAGCGGCACCCCTAATCACGCCATCACGCAAAAAAATTTTC
TCCATCACGCATCACGAAAATCGCTAAAATTTGTCATCACGCAAATCACG
CATCACGCCAAAATCTTGATCACGCCATCACGCAAAAAAATTTTCTCCAT
CACGCATCACGAAAATCGCTAAAATTTGTCATCACGCAAATCACGCATCA
CGCCTCAAATTTTTGCCCTATCACGCATCACGCCAAAATCTTGATCACGC
CATCACGCCAAAAAAAATCTCTAATCACGCCATCACGCAAGAAAAAAGTC
CCAATCAAGCCATCACGCAAACCGCTGGGGGGGGGCCTCGTTGAACTGAA
TGAACTGAACATCAATTTATGTTCATGGTAAACCAAGAAAATTACAATTA
CTGGCTCTATGCTCAGGACCTTCAATGGCAATATTATTTATTTCATTCTA
GTGAAAGAATCAAGTACGATTTTGTTGCAACATGTTCCTTCGCACATTCA
ACTCAAAACATTACAAGAAAAATTACTCGTAACGGTAAGAAAAACTATGA
ACCTCTCTAAACTTTCTTTTCAACCGTTCCCAATTGTAAGACCCGTCAGT
CTTCTTTTCGCGCTCTGCAAAGTAGCTTCTTTTTCGAAAAAGCTGATGTT
GAAACAGTTCAATGTTAAGGGATTAAGTACACAATATTTCATAAACTAAA
GTCTTCCCTTTCTTTTTACAGTTCCCAGAAATCAGAGCGGTGCACGAATT
CCATGTTTGGCAATTGACCGGCAGCCGAATTGTTGCGTCATTACACGTTA
TGTTTACGTCATCAGATGATTACAACGAACTTTCAACCTCTATGAAAAAA
TTCTTTCATAAAGAAGGAATTCATTCAACGACAGTACAACCAGAATTCAT
TGAGGTAAAATATCCACTGACTTTTATATATACCCTGGACAAAGCTTCTC
AATCCCAGCCAGCAAAATCTTTGATCGGAGTTTTTTGAAAATTGGTACCC
TAATGTCGGCACTACTCGATAGCGGTGTAAATGCATCGAGAGCGCTAGGT
CTACTTTTCCNNGCATTGCAATGGCTTCTCCTTGGGTACCAATTTAAAAA
AAACTCCAATCAAAGATGGCAGGTATTGCTTGGTCCAGGGTTATATAAAG
GTCAGTGAAAATATCATACACTAGCCTCTATTTCATACGTTGATCGATGA
TTTATCATAGTTAGATAAAAGTGCCCTCGTCGAAATTTTTTTTCTTTTCC
TTGTAAACGCAAATCCAATCTTACCTCCGTTCCCAGTGTATTCTTCAACC
AGTAATCTTCACCAGAGATGACTCGGTACAAGGAACCTGTTTATTTATTG
TCATTTGTAATGTTCAATTTCATTTCATTTCTTTACGGCCTACTTACAGA
GTAATATTGTTGTATTTATTGAGAATTATTCTAATTTTTCAGGACGAAGA
GCACTTAGGTGACGAGAATATCTGTCTATTAGCTTGTCCAGATGAAGAAT
GTGCCGAGAAAGTTTGTTGCAAGCCAAAGAAATCAAATTCGACAGCGCCA
TCAGAGACCGGAAGCATCCGATCTACCGGATCCGGGAGATCGCGGAACAG
TGGGGGATGTGCTTCACCTAAAGAAGAGAGCAAATCAAGACCGGGTTCCA
CGAGGTCTGAGAACAAGAGCGGTCGTAACTCTCCAGATGAAGAAAACGCA
AGACCAAGCTCTGCAAATTCTCAAAATAGCTTTTATAAGCAACCAGAAAA
TGATGACAAAAATACAGACTCAAACTCAGAAAGTCTCGAAGTTGAAAATA
ATGACACTAGAATCGACATCCAGATTTCACCAAGAAGTCAAACAGCTTCA
CCAGACATTACAAAATCAAAAAACAGTGAGTTTGAAGAAATTCAAATTGT
GGTCGATAATAATTCTGATGAGGAAAGTCATCTGTAGACCAATCATATCG
CTGAAAGTCATCTGTAGATCAATCATATCGCAGTTTGGGATGAGCGCTAA
TTGGAGGATATTTCTTGCGTATTACACACACACGCAAGATATATCGAACA
GATCTAAATGCGGATCCAATGTGGTAAAACTGTCCACAACTGAACCGAAA
AACAGTTTTCTGCTACTTTATTAAGTAGGACTATATGGGATAGAAGATCA
TATATCACATTCTTTAGCACAAATAAGAGAAGAGATAAATGAAGAACGCT
TAGTAGAAAAAGTCAAAAACATAAGTTTTCTTAGGACTGAAAATTGTTTT
AAACCGTGAGGCTTTTCACTGATTAAAGTTTTGTACATATTTTGATTTTT
TCATTGTTTTTTTTTATTTGCATGCAGTAAATTATAAATCATACGTTTAA
GATAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003047XLOC_003047Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005366-exon-sc0000052-1575043694:726451..726530TCONS_00005366-exon-sc0000052-1575043694:726451..726530Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:717910..718291TCONS_00005366-exon-sc0000052-1575043694:717910..718291Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:717344..717578TCONS_00005366-exon-sc0000052-1575043694:717344..717578Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:716426..716692TCONS_00005366-exon-sc0000052-1575043694:716426..716692Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:715588..715768TCONS_00005366-exon-sc0000052-1575043694:715588..715768Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:715236..715279TCONS_00005366-exon-sc0000052-1575043694:715236..715279Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:714547..714629TCONS_00005366-exon-sc0000052-1575043694:714547..714629Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:714177..714359TCONS_00005366-exon-sc0000052-1575043694:714177..714359Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1575043694:712724..713638TCONS_00005366-exon-sc0000052-1575043694:712724..713638Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:726451..726530TCONS_00005366-exon-sc0000052-1510915933:726451..726530Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:717910..718291TCONS_00005366-exon-sc0000052-1510915933:717910..718291Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:717344..717578TCONS_00005366-exon-sc0000052-1510915933:717344..717578Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:716426..716692TCONS_00005366-exon-sc0000052-1510915933:716426..716692Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:715588..715768TCONS_00005366-exon-sc0000052-1510915933:715588..715768Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:715236..715279TCONS_00005366-exon-sc0000052-1510915933:715236..715279Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:714547..714629TCONS_00005366-exon-sc0000052-1510915933:714547..714629Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:714177..714359TCONS_00005366-exon-sc0000052-1510915933:714177..714359Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1510915933:712724..713638TCONS_00005366-exon-sc0000052-1510915933:712724..713638Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:726451..726530TCONS_00005366-exon-sc0000052-1491911889:726451..726530Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:717910..718291TCONS_00005366-exon-sc0000052-1491911889:717910..718291Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:717344..717578TCONS_00005366-exon-sc0000052-1491911889:717344..717578Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:716426..716692TCONS_00005366-exon-sc0000052-1491911889:716426..716692Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:715588..715768TCONS_00005366-exon-sc0000052-1491911889:715588..715768Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:715236..715279TCONS_00005366-exon-sc0000052-1491911889:715236..715279Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:714547..714629TCONS_00005366-exon-sc0000052-1491911889:714547..714629Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:714177..714359TCONS_00005366-exon-sc0000052-1491911889:714177..714359Clytia hemisphaericaexon
TCONS_00005366-exon-sc0000052-1491911889:712724..713638TCONS_00005366-exon-sc0000052-1491911889:712724..713638Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:712724..726530 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.689526	0.807885	0.358559	0.342018	0	0	3.66527	6.86276	7.4741	11.2417	4.17204	4.21928	4.00275	7.42914	9.17337	4.24662	2.37794	1.46239	6.39785	10.5709	3.06267	3.58509	2.17918	4.62279	5.78165	3.03529	0.434348	1.39065	5.27378	6.80598
Blast
[Close]
BLAST of TCONS_00005366 vs. Swiss-Prot (Human)
Match: ZNT10 (Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.196e-40
Identity = 72/183 (39.34%), Postives = 117/183 (63.93%), Query Frame = 1 
Query: 1018 MNMRGVYLHILGDALGSVIVIIAALIIKYFEGR------WTLYVDPGMSIIMVGIILKTSVPLLKESSTILLQHVPSHIQLKTLQEKLLVTFPEIRAVHEFHVWQLTGSRIVASLHVMFTSSDDYNELSTSMKKFFHKEGIHSTTVQPEFIEDEEHLGDENICLLA---CPDEECAEKVCCKP 1539
            +N+RGV LH++GDALGSV+V+I A+I      +      W  Y+DP ++++MV IIL ++ PL+KE++ ILLQ VP  + ++ L  KL    P I +VHE H+W+L   +I+A+LH+ +     Y + ST +++ FH  GIH+ T+Q E ++ +E L  +++ LL    C  + CA+++CC P
Sbjct:  236 LNIRGVLLHVMGDALGSVVVVITAIIFYVLPLKSEDPCNWQCYIDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGVNMEELMSKL-SAVPGISSVHEVHIWELVSGKIIATLHIKYPKDRGYQDASTKIREIFHHAGIHNVTIQFENVDLKEPLEQKDLLLLCNSPCISKGCAKQLCCPP 417

HSP 2 Score: 112.079 bits (279), Expect = 6.979e-26
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 1 
Query:  301 GRNPTFYSMMFLTTSFFFVEIIVGYMTNSMALVADSFHMLSDIISLFVGFFAMRYSKM-TKGDVFTSNTFGWARAEVLGALVNSVFLVALCFSILVEAFKRLVEPEGLNDPD 633
            G+      M+ LT +FF  E++ GY+ NS+AL++DSF+MLSD+ISL VG  A   ++  T+G    S T+G+ARAEV+GAL N+VFL ALCF+I VEA  RL  PE ++DP+
Sbjct:    6 GKTCRLLFMLVLTVAFFVAELVSGYLGNSIALLSDSFNMLSDLISLCVGLSAGYIARRPTRG---FSATYGYARAEVVGALSNAVFLTALCFTIFVEAVLRLARPERIDDPE 114
The following BLAST results are available for this feature:
BLAST of TCONS_00005366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZNT104.196e-4039.34Zinc transporter 10 OS=Homo sapiens GN=SLC30A10 PE... [more]
back to top