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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005361 ID=TCONS_00005361|Name=TCONS_00005361|organism=Clytia hemisphaerica|type=transcript|length=232bp
CTACTCGCCTACTTCTGGAAAAGTATAAAAGAGGAGacgatttttaaaaa
gagtgcTTCATCACCAGCAGTCATCATGAAGGTGAAGATGATATCTTTAA
GCATTCTGTTGCTCGTGCAGCAATCTGTGTACGGTACAATTGAATTTGAC
AACATGGAGTCTGGTCTTGTCGGATACAACCTTTTGTTAGGAGATCCATT
ACAAACAACTGCAGACCCAGGGATGAAGAACC Run BLAST on NCBI transcript from alignment at sc0000052:672090..673336- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005361 ID=TCONS_00005361|Name=TCONS_00005361|organism=Clytia hemisphaerica|type=transcript|length=1247bp|location=Sequence derived from alignment at sc0000052:672090..673336- (Clytia hemisphaerica)
CTACTCGCCTACTTCTGGAAAAGTATAAAAGAGGAGACGATTTTTAAAAA
GAGTGCTTCATCACCAGCAGTCATCATGAAGGTAAGTGACCCAGCTGGCA
CACAACGTCAAAACAACGTCCATGTGACATTCATAACGTCCAAATAACGT
TATTTGAACGTTAAAACAACGTTGTGTGACAGCTGGAGAAGGAATTATTT
ATACCATTGTATTAGAAAGACGTGTGGTTCTATCTGTGTCTCCGTGGTTT
ATAAAGACTAAATCGAAGCTAGCGAAATCCTTAACCTTTAAAGTGTTTAT
AATATTAGATTGAAGAACAATTACTTTTCAAGCCTTAAATTTTTTTTCAC
TGCCCTTTCATTTAGCTTGTCTGATTATATCTTTATGAATTTCGAATAAT
CTTTAGAAATTTATTAAATGCTTAACACCCCTAAGCCCTTACACCCCCTT
TTAACGTCCCTACACCCTTACACCCCTCTCAACGCCCCTAGAACCTTACA
CCACTCTCAACGCCTCTACGCCCTTAATCTTTTGGTCAATTTCACCATGA
ATATTCGTACAAAGTATATTCTTATAAAAAACATGTATTTTGCAAATTCA
AATGAAATCTTTTCTTTGCATTACATCCAGGATAAGTAGAATTATAAAAA
GAATTGATTTTTTCAGAGAGAAATTACCTTTTCAAATTCTCGTTTTCAAT
TATTTTTTCACAGGTGAAGATGATATCTTTAAGCATTCTGTTGCTCGTGC
AGCAATCTGTGTACGGTACAATTGAATTTGACAACATGGAGTCTGGTCTT
GTCGGATACAACCTTTTGTTAGGTAAGCATTCCACTGTTTGTCAGGTCTG
AATGTAGTGTTTCTGGAATGGGTGAAGGAAAAAAGCTTTCATACGGCTGG
CCGGAAAATTTTTTTTTCTATTTTTGATAACTTAAGATCATTGAAATAGA
ACTTTAATTAAAGATAACTTTTATGTAAAAACAGTATGAAGTAAGCCCTA
AGTAGTAATGTATCAACTACCAACGAAGTCTGCGGCCAGGTCAGAAAATT
ATTTTTTTTACCCGGCCGGTTTCCGGAAACACTACATTTTTTTCATTTTC
GCCTAATCTCAAAATGTGTCGAATTGCCAAAACAAAACAAAAAGTTACGT
TATGTCATCATTACAGACGCAAAACTTTACTCTAACTTTTTATATCCTCT
CTCAGGAGATCCATTACAAACAACTGCAGACCCAGGGATGAAGAACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005361-exon-sc0000052-1575043694:673256..673336 | TCONS_00005361-exon-sc0000052-1575043694:673256..673336 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1575043694:672515..672623 | TCONS_00005361-exon-sc0000052-1575043694:672515..672623 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1575043694:672090..672131 | TCONS_00005361-exon-sc0000052-1575043694:672090..672131 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1510915933:673256..673336 | TCONS_00005361-exon-sc0000052-1510915933:673256..673336 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1510915933:672515..672623 | TCONS_00005361-exon-sc0000052-1510915933:672515..672623 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1510915933:672090..672131 | TCONS_00005361-exon-sc0000052-1510915933:672090..672131 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1491911889:673256..673336 | TCONS_00005361-exon-sc0000052-1491911889:673256..673336 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1491911889:672515..672623 | TCONS_00005361-exon-sc0000052-1491911889:672515..672623 | Clytia hemisphaerica | exon |
| TCONS_00005361-exon-sc0000052-1491911889:672090..672131 | TCONS_00005361-exon-sc0000052-1491911889:672090..672131 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000052 | supercontig | sc0000052:672090..673336 - |
Blast
The following BLAST results are available for this feature:
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