TCONS_00005336 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005336
Unique NameTCONS_00005336
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1569

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005336 ID=TCONS_00005336|Name=TCONS_00005336|organism=Clytia hemisphaerica|type=transcript|length=1569bp
tcacgcattcacgcaagtgaaaaagcccattcacgcattcacgcaaaccg
ctggcgGCCCCTTGAGGCCTCTTCTTTTAATAACCATCTGTTTGAAGATA
AAGACAGACCTTATCTCCATTTACAATTTATCACCACAAGTTTTGGGTTG
GTTGGATTCGTGCTACCTTCTTCCCTATGCATTCTTCTCTATAATTTATG
GTAACCTTGGTGACAAATATGGGAATCGAAAAATCTTGACGTGTTGTTTA
ATATGTATGGGTCTATCGATGATCAGTTTTGGGTACTGGTCTTCGCCCAT
GGCTTTTGGTATCCTATTGTTCATCAATGGTAGTGCGCAGGCAAACTTAT
GGTCAAATTGTGTCAAAAGTTTATCTGATTGGTATGAACCAGAgaaaagg
gccaccatatttGGCATTTGGGGAACATGTATTTTTGCCGGTGGAATTAT
GGGTACCACCTTAGCGGTACAACTACAAAAAGCATTCCCTGGAGAGATCA
AAATGGTTTTTGTTGTTCCATCTATTTGGGTGATTATACTTGCAGTGGTC
GTCTATATCTTCTTACGTTCACCAACGGAAGTACGCGTCCCTGTTGTGCA
AACTGATAAAGAATCACTCTTACCTGTGGCAGAGCAGACGCTACCTACTC
AAAGAAATCTCAATATTCTTGAAACATGGAGGTTAAGAATGGTTCCAGAG
CTATGTTGGACCATGTTTGGCATGAAATTGGTGCGATATTGTTTGTATAT
GTGGCTACCTATGTACCTTAACCAAAATCTGAATTATTCAAAAGCAGAAG
CAGGAATGTTCAGTACATTGTATGAGATTGGTGGTGTAGTGGGATCTGCA
TCCATTGGTCTCTTCATTGATAAGGTCATGCGAGGAAATACATATATGGG
TGTATTCGTATTACTGACTCTCTCCACATCCGCCCTTTGTTTGTTTCAAC
TTACAAGTCAGTGTGGAATGGTTATGAATGCTATATTTTTATTTCTGGCG
GGAGCCGGAAGTTCCGGTCCGGATGCAGTCATTTCTGGATCACTGGCAGT
AGAAATTGGTACACGGGAAAATGCGCAATCAGCAGTTTCAGGATTAATAA
ATGGATTTGGAAGTCTTGGTGCTATACTTGAAGGCCCTTTCATTGCAATG
GTCTTAACATATTTTGGATGGAGTGGGACTTTTTATGTCATGGTTCTGTT
GACTTTCTTAAGCGCAATCTCCATTGCAAGACCGGCATTCCAAAAATGAT
AGCATTTTGACTGATttggtttaaaaaaagaatatatttatttatttatt
tactttatttGTTTTAAAGGTACGTTAGAAATTATGTAGAAGCATTATCC
AATATAGAGCTAGAAaatgataaattaaaaaaattgcaaagatTGTTTTA
AACGTTCAGGAGGTTTGAACCCTTTTAACACCCCCTGGAACAATAAGGCT
AGAAACACCAAAAAATgagaataccttatcggggaaaacttcgtcgggga
aaagtgacgaaatttcggccaagtgacgaatatttttccccgacgagaat
tttccccgacgaaaatttt
Run BLAST on NCBI

transcript from alignment at sc0000052:382486..392134-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005336 ID=TCONS_00005336|Name=TCONS_00005336|organism=Clytia hemisphaerica|type=transcript|length=9649bp|location=Sequence derived from alignment at sc0000052:382486..392134- (Clytia hemisphaerica)
TCACGCATTCACGCAAGTGAAAAAGCCCATTCACGCATTCACGCAAACCG
CTGGCGGCCCCTTGAGGCCTCTTCTTTTAATAACCATCTGTTTGAAGGTA
GTAAACGCTTTCTCCCTGGATTGTTCCACATACCCTTAATCATTCTCTTT
AATTACTGAGCACTAAGCAGAAAGGTACCCAGTTCCATTTTGGCTTGGAA
TTGAAAGAAATCTTTTCGAAAAAGTAGGAGCAGAAGCAAGGGCCGAGAAA
ATTGGTTCGAGTTAAGCAGACATTTGAGCTATAGAGGGTCGAGTTAAAGA
GGATAATGTATTAAGTCAGCTTGGATAAAATGAAGAGTTGAATGTTATTT
AATTTGGATGGACAACCTTCTGTAGTTGATTGATGCGAATTCCTTACGGG
TTAAAAAGTTTCTTGAGCCTAATTGGACGGGGTGAAATATCATTGTAATT
TCCAAGTTTAATAGTAAAGACTTTCAGGGTACTACCTTGACCTGAGTTTT
TTTTGCCGGTTTTCCAGTTAGGGGTTCTATTGGACACATGACACTAACTA
ATTGATTGTAAGGTTTTTTGATATTCTACGGAGCACTACAAATGGTTGGC
AAACGATATCATACTCCAGGATGCAAGTGAAATTTTTCAATCCGCGGACG
TAGACGGGGGTTCGGTTATTATCAGTTAGGGTTAGGGTTGGAGCTCGAGA
GTCACAATATAAGGCTGAAGGCCTTCATAGGGGCATTCGTACCCTGTGAC
TTAACTTTGGATTCCTTAGGGATCCTTGTAGGGGCACCGGTAGGATTGGG
AGCTTTCTTAATTAAGGTCTGTAAATTACACGCTATAAGTATTTGTGAAT
GACAGCTTTCTGTCGTGTTTCGTTGGCGCAAGCTGTTAGGCATTGGGTAT
GTAGACCAAGGTTGCTTGCATTTGGTGGTTCGAGCCGGTGTCGGTGACCT
GTTTCACCGGTACGGGCAAATTTCAGAAAAATACTTAGAAAATAGTTAAA
AACACTTGAGAAAGATAAAAAATCAGGATAGAAGATAGGAAAGTAGAAAA
TAGGGGGGAAATAAGAGACGATGCATCCTGGAGTATGATATCGTTTGCCA
ACCACTACAAATACTGCACCTATGAGAGAATACACTTGTTTGAGATTATC
TGATTGTAGATCTTTACGTCGGTATTAGTCATACCCATTCTTTTGTATTC
TATAGTTTAGCTTTCAGATAAAATGGAGTCATAATTATTTTATAATCATT
TTTTACAGATAAAGACAGACCTTATCTCCATTTACAATTTATCACCACAA
GTTTTGGGTTGGTTGGATTCGTGCTACCTTCTTCCCTATGCATTCTTCTC
TGTAAGTAACTATTAATTTGATTTCTTCATTCGACATTTGACATTTGCAT
AATATTAATAGTAGGGGGTAAACCCATGCGGATTGTGTCCTACATGTTAC
GGTTTGGCCCTTACTATAAATACTCTCGGGTACCTAAAAAGCATCCCCTA
GTTTATTTCTCGAAAAGTTTCCACCCAGGACATTCTTATTCCAACCCCCT
TCCTCCCGCTTATCAATTTTTGGGAAAATATTTTTGAAAGTACCCTCTTT
CACCCTAATTCTGCTGTATTAGCCTTCTTTTCAAAGATTTTCCACCTAGG
ATATTTTTATTCCAACCCCCGGTTTATCATGTTTTGAGAATCTTTCCACC
CACCCCGCTTATTCCAAACCCCCGGCTATTAGATACCCCAGAGTAGTTGC
TGACCATTATCTAATTTTCAATACCAAGCCTGTTTATAATTGAAACTAAA
ACACAGGCTGACATCATCATCCTTAAAAAATGGCTAAGTTTCTATTAGCT
CCTTCTAAAAGCGAATCTTGCCTGGCTGGCTGGCTGGCTGGCTTGCTGGC
TTGCTCAGAATCATCCCGTTTTAATCAAAATCTTTTGTTATTCCCAGCAC
TAGCTACAAAACTTTCAGAACTCCCCTGCCCGTAGGTGTTCTCGGACTAA
AAGGTTAAGAAGCTCATTGTTTTTGATTTTCTTTCTTCGTACTTTTTAGA
TAATTTATGGTAACCTTGGTGACAAATATGGGAATCGAAAAATCTTGACG
TGTTGTTTAATATGTATGGGTCTATCGATGGTAATGTTAATTTTCTCGAA
AATGCTTAAACCCAGTCCGTTAGCTTGCTTTTCTTATATTCTGATAGCGC
TCATTAAAGGTACTACACCCATCAGTAATATCAAAAGTGGTGCATGGATG
TGGCTCTGGGTACTCTTGTCTCCCGAATAGACGTCCCCCCCCGCTTATTG
TTAAGAGAAAAAAATCCATCCTCCCGCTCTTATTAAGACCCCTGATCCCC
CCCTGCTAATTAAATTTGAATATTTCAATATTTTATTACAGAGTAGATAG
ACCTTAAACTTGTTAAAATTTTCCTTTTTGTTAGTATTGGTTCTTATTCT
ACGTGTTTATTTGTTAAATATCCTTTTTGGTTGTTAAAATTGATATCAGT
TTAAAAAGATTTTGTCTTCAAATTACCCCCCTCCCCTTTAATCCCTCTAA
TTCCATTTCCCCCGCTTATTAGAATTTAGAAAATTTTCCTACCCCCTGCT
TATTCGGACCCCCAGTCTATTCGGGAGACAAGAGTACGAGATTGCAGAAA
TACAGCTTTTTTTAACACTAACATATTCTTCATGTGACTAAGCACTGATC
GTGTTTTCTTAATATATTTTTGTTTTTTAATTTGAACCCTTTTTCGTCAG
TCTTTGGTGATTTTGCTATCTATTTCACTAAAGTAATCAACTTTCACTCT
TTAGTGATGAAAAGCTCAGCCGGTACGCTTCAATTTAGCAAATAGGTGGA
AAAATCGGATACTTAGAATAGCTATTTTGCTCAATTACTTTAAAGAGCTT
GCTTTCTTATCAACTTAAATTGGATTTGTTTATTTATTCGTAGATCAGTT
TTGGGTACTGGTCTTCGCCCATGGCTTTTGGTATCCTATTGTTCATCAAT
GGTAGTGCGCAGGTACTGAATTATTTTGAATCTAAGTCGGTGTTTTTTGT
ACCTGAATGACTTTTCAGAGATCTTTTTCGCGTTATCTTCTTTAGTGTTA
GGAATTTTGGACCTTATTTTCATAAATGACGTATTTTTCCACGAGGATTC
CAATGATATAGGTTTCGGAGTAATTTGGGATGAAATATTCCAGAAAATCA
AGATTTTCTGATTTTAACTATAGCAATTTTTTAAAACGGTTTTATCATCT
AAACCCTATGGACACCTAAATTGTTGATACCATAATTTTCCAAATTTAAA
TTTAAGGAGTAGAAAAGAATGAAAAATTCCACAATTTTCGATTTTGGGTG
ACATAAAAAGTGGAATATTTCATCCTATGTCACTCTTTCGGTGAATATAT
TGCTATTTTCTGAAAGAGATGCTCTTTACTATTACACTCATGTAATTTTT
ATCCTCAAAATAATATCCATTAGTTTTTAAAACATTCTTTTGGACAACCC
GTATTTTATCATCATCCTTTTCTACTCCTTCATCATTGTGCTTACATTTT
CTAATAATTTATACGGTACACACCTTTTTTGAGAGTATAATTTCAAGACA
GAATCTTTCATAGATAAGGAGTAATTAACTGTGAAATTTTTCATCCATCC
GCACATAAGAAAGCTCTTATCCTATAGATTACTTCCTAATTTCGTCCTTA
GATTGTAGCTGTTCAACTCGTCCAATTAAAGCCGGACTAAAGAAATCGGA
ATATTTCAACCCTATCTCTTTTTCTCAAAATAAATTGAAATACTCGTGTA
AAAGTTTTCATTAAGAAAGGTTGTCAGGAGATGCCCCAAAAAGACAATTT
GGTATATTCTAAAAAAACACCGACCTAAATATTCCACGCACGTATTAAAT
GACAGCGTATTTTAGTTACACCAGAATTACATTTTGATATTACCAGTCAC
GCACTGATCCACTATAGCCAAAAAAAACGTTTTGATTCACAATAGAAGAG
ATAATTGGCCCTTTTTCAAACTAGTCTTATCGGTATTATTTACGCGGAAT
GAGAGCCAATAGGGTCAATTTAAAGAGCAAAATTGTTACCATGTTTTACT
CAGCTCAGTTGTTCAATACGTTTATATAAAGAATAAAGCAAGCCCAGCTC
TGTCACACAGCGTTGTTTCAACGTTCATTAATGTTAACAACGTCCATATA
ACGTTAAATGAACGTTGAAACAACGTTGTGTGTCAGCAGGAAGGGTTAAA
AATACGCTGAGAACGAAGTTTAAAAAAGGGTTTAAAATTTAAAAATAAAA
AAATTTAAAAACTTATCACTAGTATTTCCTTTCTTCACTAGGCAAACTTA
TGGTCAAATTGTGTCAAAAGTTTATCTGATTGGTATGAACCAGAGAAAAG
GGCCACCATATTTGGCATTTGGGGAACATGTATTTTTGCCGGTGGAATTA
TGGGTACCACCTTAGCGGTAAGAAACATATGGATATTAGATGATTTAAGT
ATTTCTTACTAGCCATACCACTGTACCGATATATGATCCTCCGGTCTGGA
TTACAAATCTCAATTGAACCCTTTTCCATATTATATAACTACGTACTTGA
AACCCTTCTTTTATTTAAACGATTAGACAATGCTCTGAAAATTGTGAAAA
GGTGGGCTGGAAGAATTTTTTTCAGAGAATTCTTTTATATTTCTACTAAT
TTTTGCAGCCTAGAACCGGAATGCCCGCAATCTAAATCAAGCAATTTTTT
AAAGTTAATACTTTAAAATGACTCGAATTTTTTTCTCATAAGACAAAATG
CTATTGTATAGCTCAATTTTGGTAGTGGGAAAGCGACTCTTAAGTTGGGA
GCTACATCAAATTTTGAAAAGAGGAGATAATTTGGACTAGGAAGGGAGGG
GGTAGCGATTCCCTTCAGAACTGTGGATAAACATTTTACCGGGGATTCTA
TAGGGAATTTAACTAATTCTAACTGAAAGAGACTAGCAAAATCAAGTTAT
TTGCATTTTGAGTCTATTATTTATTTTCGTACAGGTACAACTACAAAAAG
CATTCCCTGGAGAGATCAAAATGGTTTTTGTTGTTCCATCTATTTGGGTG
GTGAGTATTGTTCTTCTCACACTTCTCAACTACTCTTCGTATGGAACCAT
CTCTCCATCTCAAAACAATATATCTTATTCCACTTTCAAATTGATTCTCT
TTTTTGCTTTGGCTAACCAAATTTTCCTAGTTGAATTTACTCGTAAAGGT
GAAATAGTGCAGTCTGACAGTGAGTCACGCTTGTCAAACAAAGCTTATGA
AACAATGGACAATATTAACTTACTTATTATATGCGACCGCAGTCGAGTAC
ACCTTCACAACATCCTGACACCTCTTCCTATCATTCATCATTATTGGCAG
ATCTTCTAGCCGGACATTTGTTTCTCTGACAAAGCTTATGAAACAATGTA
AAATATTAAGATCAGCCAAATATTTTAGTAATTTATTCTTGTGATATGTC
TTTTTTCTGGACAGATTATACTTGCAGTGGTCGTCTATATCTTCTTACGT
TCACCAACGGAAGTACGCGTCCCTGTTGTGCAAACTGATAAAGGTTCGTT
TGATTTCCCCTTGTCCATGAATTTGTAAGAATTCGGTCGGCTATCCAATG
ATGCGTGTCTAGATAGAAGAGAAAATACCATGACTGGGAAGTCAAAAAAC
AGTCTAGTGAACCATCGGATCCGTAGCATCTACCGTGACCTTTTATGAAG
ATTTAAAGTTACATCCGATAGGGTTGTCTGATTTTCACCACTTTGCAGGA
TGTAGGTTTCAGAAAAAATTTGCATCTGTCGTATACGGAATTTCTTTCTT
CAGGGTACAAACAAATTCAGTCTAAATCTCATCGAAATGGGTTGATTTTT
TGAAACTCCATTACCATAGGGATGTCTTCGTTAGCCCTAATCTCCAAGCA
GGTTCTGATTACTCTGCATTTGCACGTATTTACTCACACACCAAAGACCA
TGGCTCCGTAAGAGAAACTGCCCATGTGGGCGCACCGCTTTGATCTTTTT
TATCTAGGTTTGGAATGAATACTAAATGAGCTTTTGAGCGTTGTGATTGG
CTAAAACGAAACAATTACATTGTAATCAAGCGCCGATTAAAAATAGAAAC
ATTAGAACTAAGTCGCTTTCGCTTTCGTTTTCAAGCAAAAAGCAGCGCGG
TTTTGATTGTTTTGGATGAATAACCAGGTCGTTTCTTTAAAGCAGAGCGT
GAGGTGCGCAGAATGGATGATCTGTTATGAGATAAGGTCGGCCCATGGTT
TGTGGTGCTGACGTGGCAACCGTTTCTCTTAATCGATAATTTTTGTATTG
CACTTTCAGAATCACTCTTACCTGTGGCAGAGCAGACGCTACCTACTCAA
AGAAATCTCAATATTCTTGAAACATGGAGGTTAAGAATGGTTCCAGAGCT
ATGTTGGACCATGTTTGGCATGAAATTGGTGCGATATTGTTTGTATATGT
GGCTACCTATGTACCTTAACCAAAATGTAAGTAACCTGTGNTTGTTTGTA
TATGTGGCTACCTATGTACCTTAACCAGAATGTAAGTAACCTGTGCAACG
TCACAATAACGTCCATTTAACGTCCCTAACATCCATCTCACGTCAGATGA
ACGTTGTAACAACGTTGTTTCCAAGCTGGGAAATGGATTTTTCTCAAATT
TTGCTTGTACTACAAAAATCTGATTCGCAAACAACTTTTCTTCTTACAAG
AAACTGTTCCGTTGGAGGATGAATAGCAGACTTGCAATACAATCACTTTG
GGCTTTTTATTGAAATTGTTAGTTCCGAAAAGTGTGGAATACTATTTCTT
CAATACATTATTTGAATTTTCAAAGACTGATCGATCTGCTAAGGGATTTC
ATTAGAACAATCTTTTATAAGAACAATTTTATAAGAACAGCGAGGTTCAA
AACTGCCAAAAAATCAAAACAGTTTAAAAGAAATGATAGACCTCTTCAAA
TATATTTGTTCTTATAAAAGAGCGTATCCAGCAGAATCTTGGCTAGTTCA
GATTTTTAATCGCTAATAATATAGTTCCTTTTATAAAAACTTCAAAAACT
TTTCCAGTTTTAAGATTAAAAAATGGTCTTAAAATGTTTTCAATTTCACC
ATGTTGTGATAATTTTCATGTAATTTCCTATAAGAAATAAGATGTTTTAG
ATTCCGCAAAGCCTTAAAATGTTCTAATATAATTAGTTCTTATATAAAAG
ACGGTTATATCTTGTTTATTATGACGATTATGTTTCAGCTGAATTATTCA
AAAGCAGAAGCAGGAATGTTCAGTACATTGTATGAGATTGGTGGTGTAGT
GGGATCTGCATCCATTGGTCTCTTCATTGATAAGTGAGTTTCCTATTTTT
TCCATTTTACTTTGTTTTTAGCACAAGTTTTATGAACCCTGGCAGCTCGT
CTCAATCCTTACCAGTCAAAATTATTTAATCAGAGTTTATAAATGGCTAA
GTTAGGGTTTCGAATAAAGGTTGTTGGGTATAACAAAGAATCACGGGAAA
CTCTTAACACTTAATCTTAAAAAGATTACTCTTGTCTCCCGAATAGACGG
GGGGTCCGAATAAGCAGTGGGGTAGGAAAATTTTCTAAATTCTAATAAGC
GGGGGGCTGTGATGGAATAAGAGGGGGGGGGGGAATTTGAAGACATCATT
TTTTTTAACTGATATCAATTTCAACAACAAAAAAACTTTAACAAATGAAC
ACGTAAAATAAAAACCAATACTGACAAAGGACAATTTTAACAAGTTTAAG
ATCTATCTACACTGTAATAAAATATTGAATTATTCGAATTTAATTAGCGG
AGGGGGGTGTCTTAATGAGAGCGGGGGTTGACTTACACAGTTTCTTAAAC
AAAAGAAAGAACAGCTTTTTTGAGAAATTCTTTTGTTGATTCTTAAGGCT
TGGGGGAAGTTTTTTTGCGTTGGTGCAATGCAACATGCTCCATCCCACCA
ACACAAGAAAAAAAGTGTGTGTCTCATGGTTTCTTTTTTTGTTTCATGGG
ACAAAAGATATGCCCTCCGATGTATCGGAATGGGTCCTACCCACGGTGGA
GTAGGAATCACAGCGCAAGCAGACATTGCAACCCTGCAGATGCGAGCTGC
CGAGCCATGGTGTATACTACGACACTCGAACTACACGGGAGAACGGATGT
CCTCGCAAGTGTAGAACCTCCTGAGTGTCACGGCACACCACAATGTCTGA
AATATCTACCCATACTCTTGTATCAGAGAGTTATGGTACCCAATTCCCCT
CACATGGCATGGGTTGACCCGGGCGAAGGAACATTCACTTGCCAAGTGAA
TCGTAGCGCCACAGTGGGTATCGAACTCGAGCCTCCTGGACAGAAGTCAC
CAAATATCCAAAAGACACGCTGATTTTGTCCCAGGGACAAAAGTGAGAGA
AAGCCTTTATCAAGAGATGCACAAACTCGAAAAACAATGTTGTTTTAGTT
AAAAGTCATCTGTAAGAAATAATTTGGATCCCCCCCGCTCCTTCGCCCTC
CTTTGCTGCTCCACCCTCTCAAATATTGTTACTGTAATACCGTATTATAA
ATCATCATTACATATTCCTTTTTTTAACTAGGGTCATGCGAGGAAATACA
TATATGGGTGTATTCGTATTACTGACTCTCTCCACATCCGCCCTTTGTTT
GTTTCAACTTACAAGTCAGTGTGGAATGGTTATGAATGCTATATTTTTAT
TTCTGGCGGGAGCCGGAAGTTCCGGTCCGGATGCAGTCATTTCTGGATCA
CTGGCAGTAGAAATTGGTACACGGGAAAATGCGCAATCAGCAGTTTCAGG
ATTAATAAATGGTAAGTAGTAACTTTTTCTTTACCCCAGTAAAGTGATTT
TGGCTAAGATAGAACAATCACATCAAAATTAAGCGTCGATCAAAAAACAT
TGCTTTCGTTTTCAAGCAAAAGGCCATATACATTCATGGTGCAATATATT
CTACGAAGACAAGCAAGTTTTTGCCAGTAGTGGCAAATTTAACCTAGAGA
AAAACCGTTCAAAAATTGCGCGTCTGTGAGAAGGGGGTGTAGATATGAAT
AGTAGTTAATAATTGCCTTAAATTTTATATAATTTTGTTGTGTGTTTTAT
TTGATTTTTCTCCATTTCTATTTTTCCCTTTAGGATTTGGAAGTCTTGGT
GCTATACTTGAAGGCCCTTTCATTGCAATGGTCTTAACATATTTTGGATG
GAGTGGGACTTTTTATGTCATGGTTCTGTTGACTTTCTTAAGCGCAATCT
CCATTGCAAGACCGGCATTCCAAAAATGATAGCATTTTGACTGATTTGGT
TTAAAAAAAGAATATATTTATTTATTTATTTACTTTATTTGTTTTAAAGG
TACGTTAGAAATTATGTAGAAGCATTATCCAATATAGAGCTAGAAAATGA
TAAATTAAAAAAATTGCAAAGATTGTTTTAAACGTTCAGGAGGTTTGAAC
CCTTTTAACACCCCCTGGAACAATAAGGCTAGAAACACCAAAAAATGAGA
ATACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTCGGCC
AAGTGACGAATATTTTTCCCCGACGAGAATTTTCCCCGACGAAAATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003036XLOC_003036Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005336-exon-sc0000052-1575043694:392038..392134TCONS_00005336-exon-sc0000052-1575043694:392038..392134Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:390784..390876TCONS_00005336-exon-sc0000052-1575043694:390784..390876Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:390005..390085TCONS_00005336-exon-sc0000052-1575043694:390005..390085Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:389123..389191TCONS_00005336-exon-sc0000052-1575043694:389123..389191Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:387668..387793TCONS_00005336-exon-sc0000052-1575043694:387668..387793Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:387035..387100TCONS_00005336-exon-sc0000052-1575043694:387035..387100Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:386542..386620TCONS_00005336-exon-sc0000052-1575043694:386542..386620Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:385609..385775TCONS_00005336-exon-sc0000052-1575043694:385609..385775Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:384752..384846TCONS_00005336-exon-sc0000052-1575043694:384752..384846Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:383274..383503TCONS_00005336-exon-sc0000052-1575043694:383274..383503Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1575043694:382486..382951TCONS_00005336-exon-sc0000052-1575043694:382486..382951Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:392038..392134TCONS_00005336-exon-sc0000052-1510915933:392038..392134Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:390784..390876TCONS_00005336-exon-sc0000052-1510915933:390784..390876Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:390005..390085TCONS_00005336-exon-sc0000052-1510915933:390005..390085Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:389123..389191TCONS_00005336-exon-sc0000052-1510915933:389123..389191Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:387668..387793TCONS_00005336-exon-sc0000052-1510915933:387668..387793Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:387035..387100TCONS_00005336-exon-sc0000052-1510915933:387035..387100Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:386542..386620TCONS_00005336-exon-sc0000052-1510915933:386542..386620Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:385609..385775TCONS_00005336-exon-sc0000052-1510915933:385609..385775Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:384752..384846TCONS_00005336-exon-sc0000052-1510915933:384752..384846Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:383274..383503TCONS_00005336-exon-sc0000052-1510915933:383274..383503Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1510915933:382486..382951TCONS_00005336-exon-sc0000052-1510915933:382486..382951Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:392038..392134TCONS_00005336-exon-sc0000052-1491911889:392038..392134Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:390784..390876TCONS_00005336-exon-sc0000052-1491911889:390784..390876Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:390005..390085TCONS_00005336-exon-sc0000052-1491911889:390005..390085Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:389123..389191TCONS_00005336-exon-sc0000052-1491911889:389123..389191Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:387668..387793TCONS_00005336-exon-sc0000052-1491911889:387668..387793Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:387035..387100TCONS_00005336-exon-sc0000052-1491911889:387035..387100Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:386542..386620TCONS_00005336-exon-sc0000052-1491911889:386542..386620Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:385609..385775TCONS_00005336-exon-sc0000052-1491911889:385609..385775Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:384752..384846TCONS_00005336-exon-sc0000052-1491911889:384752..384846Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:383274..383503TCONS_00005336-exon-sc0000052-1491911889:383274..383503Clytia hemisphaericaexon
TCONS_00005336-exon-sc0000052-1491911889:382486..382951TCONS_00005336-exon-sc0000052-1491911889:382486..382951Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:382486..392134 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.27932	0.568418	1.20508	1.09881	0.709721	0	0.0934507	1.16063	2.01122	1.83035	3.48642	0	1.93492	0.681036	4.8986	3.36428	0	2.2241e-08	0.347274	0	1.85673	1.10768	2.7792	0.589382	2.07628e-08	0	0	0.203519	0	0.544595
Blast
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BLAST of TCONS_00005336 vs. Swiss-Prot (Human)
Match: G6PT3 (Glucose-6-phosphate exchanger SLC37A2 OS=Homo sapiens GN=SLC37A2 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 4.960e-30
Identity = 107/407 (26.29%), Postives = 189/407 (46.44%), Query Frame = 2 
Query:  137 QVLGWLDSCYLLPYAFFSIIYGNLGDKYGNRKILTCCLICMGL--SMISFGYWSSPMA---FGILLFINGSAQANLWSNCVKSLSDWYEPEKRATIFGIWGTCIFAGGIMGTTLAVQLQKAFPGEIKMVFVVPSIWVIILAVVVYIFL-RSPTEVRVPVVQTDKESLLPVAEQTLPTQRNLNILET------------------------WRLRMVPELCWTMFGMKLVRYCLYMWLPMYLNQNLNYSKAEAGMFSTLYEIGGVVGSASIGLFIDKVM-RGNTYMGVFVLLTLSTSALCLFQLTSQCGMVMNAIFLFLAGAGSSGPDAVISGSLAVEIGTREN------AQSAVSGLINGFGSLGAILEGPFIAMVLTYFGWSGTFYVMVLLTFLSAISIARPAFQK 1246
            ++LG +D+ +L+ YA    I G  G++   R  L+  ++  GL  S+   GY+ +      F ++   NG  Q   W + V  + +W+   KR  I GIW +    G I+G+ +A        G+  + F+VP I   ++ V+ ++FL   P +V     Q   E          P     +I E+                         R+  V E    +   KLV Y    WLP+Y+    ++S  EAG  STL+++GG++G    GL  D    R  T     V+L L+   + L+    Q G+  + + L + G   +GP A+I+ +++ ++GT ++      A S V+ +I+G GS+GA L GP +A +++  GW+  FY+++    L+ + + R  +++
Sbjct:   85 ELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVN---GQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATT---CCVMLILAAPMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAAL-GPLLAGLISPTGWNNVFYMLISADVLACLLLCRLVYKE 484
The following BLAST results are available for this feature:
BLAST of TCONS_00005336 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G6PT34.960e-3026.29Glucose-6-phosphate exchanger SLC37A2 OS=Homo sapi... [more]
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