TCONS_00005334 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00005334
Unique Name	TCONS_00005334
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2477

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000052:333504..341742-

transcript sequence

>TCONS_00005334 ID=TCONS_00005334|Name=TCONS_00005334|organism=Clytia hemisphaerica|type=transcript|length=2477bp
GTAATCACCACACACACAAAAAGTcattgacaaattaaaaaaaggaaaga
gaGATTTACCtcattaaaacaaaaaacaacataagAAAAAAGGACTCTCC
TGCTCCCTGTTTTCATTATAATTCCAAAATCTACTGTCAAGATGAAAGCT
TTGATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGAC
AAGACCAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACC
AAGTGGAAGCTTTGGCTGCTGCTGGTGTTGATCATGTCATTTTGGCTGTT
AGTTATTTATCAGAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAA
GCTTGGTATCAAATTTAGTATGTCACACGAAGTTGAACCATTAGGAACAG
CTGGTCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGaacct
ttctttgttttgaactGTGATATTACAAGTGAATTCCCTTTCAAGCAAAT
GTTAGAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTAGTCACCA
AAGTAGAAGAACCTTCAAAATATGGGGTTGTCGTTTATGAAGAAGACTCA
GGCAAAATCAACAGCTTTGTCGAGAAACCAAAAGAATACGTCTCTAATAA
AATCAATGCTGGAATGTATATATTTAGCCCGAGCATATTGAAAAGGATAG
AGccaagACCAATGTCAATAGAAAAAGAAGTCTTCCCATATATGGCAAAT
GATAGCCAGCTATATTGCATGGAGTTATCAGGTCATTGGATGGATATTGG
TCAACCAAAAGATTTCATCACTGGAACCAAATTACATTTAAATTCATTAC
GGAGGAGAAATGCGGAAGTCTTATACGATGGAGAAGGTGTTCGAGGAAAT
GTTTTTACCGATCCAACAGCTAAAATCGAGCCCGAATGTCAAATAGGACC
AAATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGgtGCATGTTTAT
CCAATTGCATAGTCATGAGAGGGGCGACCATTCGATCACATTCCTGGGTA
CGAGATTCAATTATCGGATGGAAATCAACTGTCGGACGATGGGTCCGTAT
GGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGAAGGATGAGATCT
ATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATATCAGCCTCTGTT
CCCGAACCCAATATTGTCATGTAGACTGGATAAGTTCTTTTTAACAACGT
CTGTCAGTATTGTTGTCTCATGTGAAGCTTTCAAAGTTTAAAGATTGAAA
CTAAGGCTTCTCAGTTATCAATTGGGTATGTTCTAAGtctttttcaaaga
atttgttAAGGAAGACAAGCTGAAGACTTTCAACTTCTATGAATATTATT
TCTTTCGTTTTTAGAGTAAacccttttgattttttttctaactaTAAGTG
ACGGGGCCCtactattcttatttttttgtaacGGTTATTATAAAGGGTTC
TGGGTaggatattttttaaatgaattatgTGTTATTTAATAAACATAAAA
ACTAATAGTTAGGACAAGCAACTGGATAAATTTTTGTTCAAATGTATGGC
TACAAATTTACcatttctattcatgatatgcaccactggagagccttcca
agaattttcaaaaaattccaaCCAATGTGAAatttctcagaagactctcc
agtggtgcatatcatgaattctacCGCTTATAAGCGTTGAAATGTATTTA
TCAACCTTTGCGTTGCAAGAGGATTGGGGCCGAATTTTTCCAGGGTTGTG
TGATGTCAAATGTTGTTGTTGCTGGCCAATGCATGATATGTACCATTGCA
ATATCTTCTGGCATTACATTATGgaaccaacagctgattggttgcaattt
tacgtcactttcaaccaatcagctgtagggtccgtagaagacattgcaat
ggtgcatttCACGAATTGCATTATGAAGTCATTCAACTCggctgaccttt
atataccctggacacaGCTTTTCGATACCGGCCAAACagaatctttgatc
ggagtatTTTGAAAGTGATATTTTAATGATTTGTAAATTGACCCACATTG
AGAAGTGCTACCATTAAGGTTCCCTTTTTCTAAACTCTACAGGACAGTGT
TCAACCATTGTAAACTTCGGCCGAATCCTTTTGTGTGGTTCATAGTGGTA
TAACACCATGTTCGCATATAACGGTTCAGTTTCGCTcggaaacgaaatga
agccattctattggttaaaagtgacgtaaaacttaaATTTAAACCAATAG
GacggcttcatttcgtttcggagtgaAACGGAACCGTATTGTGCGAACGT
GGTCCAAGCTATTCTTCATATGTTTTATCAGCTTATTTTGATATTGCTGG
TTATAGCTAACTATTAGTTTTATCTTATTGTCTTATATCTATAGCTAAAT
TCAGGAAAGTCCTAGTCAAAGACTTGC

Run BLAST on NCBI

transcript from alignment at sc0000052:333504..341742-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00005334 ID=TCONS_00005334|Name=TCONS_00005334|organism=Clytia hemisphaerica|type=transcript|length=8239bp|location=Sequence derived from alignment at sc0000052:333504..341742- (Clytia hemisphaerica)
GTAATCACCACACACACAAAAAGTCATTGACAAATTAAAAAAAGGAAAGA
GAGGTGAGTAATATATTGGTACTGAATAATAGAGTAATGCCATAAGATCC
ATATAATCCATTTTCTCGCCTAGTAATGTTATTTTTATGTTTTGTTCAAG
ATTTACCTCATTAAAACAAAAAACAACATAAGAAAAAAGGACTCTCCTGC
TCCCTGTTTTCATTATAATTCCAAAATCTACTGTCAAGATGAAAGCTTTG
ATTCTTGTTGGAGGGTACGGAACTCGTCTGAGACCCTTAACATTGACAAG
ACCAAAACCACTTGTTGAATTTTGTAATAAACCAACACTTTTGCACCAAG
TGGAAGCTTTGGCTGCTGTAAGTATCTTTTCTTTTATTCTATATATTATG
AACTCATTTGCACATTGACCATTGTAAGGAAGGGAGTGTGCTTTGAAATT
AAATTAAGTGAACTTACCTGTTTCTGAGTGAGTCAAATACTGTGAACTTA
TCTACCGTGAGATTTGGTAACTTGCATCAGTGGAGGCTAACATGCATAGC
CCTCAAATGAATGACCTGGCTGGTCATTGAAATAAACTATATATTCAGCT
CCGCTCACAGCTCTACTCTACCATTTTTGTTTTGACTTAACCAGGCCATT
CATTTTAGGGCTATGCATGTTAGCCTCCAATGAACTGATGCAAGTTACAC
AATCTCACGGTAACTAATAAAATTCTGATGGAGTACAGTCAACTGCTCTA
ACTTGGGACTATCTGACAAAACATGGGATGGCAATTCGGCCACCATTTCT
CAAAAGCTCCAAAGTCATTTAATTTGAGTTAATGAATGGCGTATTAAAAG
AATACAGAATTTCTCTTTTGCACTGAGTAGCCTTTAAATCAAAATATGGA
AAGAATCTGTAGTAGTGGAACACACGCGAATGTCTGGAACGAAGAAGACC
AAATTAGCAAAACAATGGAGTGTTGTCGTTATCGTGACATATTATGACAG
AAAGTATGATTGATAAACTTGGTGGAGTTATCAAAACAAATTTGTTTTCA
AAAAGAATTAACAGTAAGTATAAATACAGGCCAGATATCAACAGTCCCAT
GCTTCGACCTATCGTCCCAAGTTAGATCAGTTGACCATAAATAGTTATTC
AAAAGATCGTCGCATTCTAACAAACAACGATGATTGTAATCAAATATTAC
CCAGGGTTTGCCGTTCAATTGCTTCGATTACGTTTGATTGTATTCGATAA
TGTGTGATTACGTTCAATTGATTCAATCATAGTATTCACTTGCTTCATTA
TTCGCTCACGTACGTACATTACGTACTTTGCATATTGGCAGTCGCCCACG
CTAAAGCTCTAAAGGGTTGGGTCAATTTAATTGCAATCAAACTTATCGAA
TATAATCGTTAGATAAATGGAACGTAGTTGACAGTCAATTGAACCAATCG
AACATTATTCAAACACAATCAAATATTACTTAGGAATTGGCCATTCAATT
AAGATTCAACAATTCAACAATCGAATAGCACTTATTTGATTGTGTTTGAT
TACATTCAATCGGTTCGATCTTGATTTCCTTTCGAACATTTTCAATTAAC
ACTGTCTGGACATTCTCCTGAATTATAACACGTGATAACGCAGGGGATAA
CGCTGCAAAAGTTTAGGGTTTCATTTATGTAATACAGAGCAGATACTTTC
TGGCTCGAATGGGTGGAGTAATTTAATATGTAGAACTTAGTCAATAGGTT
GTCCCATTCTTCAAAATGGCTATTGCAAGGGGGTCATTTGTTCTCATTCA
CTATATTAAAGTGATACTGGTTAAAGAATTTTTGATAAATGCCCTCTTCT
AAAATCCAAAAAAAGTAATAAAAATCCAGGCCGTTTATTCAAAGTAATCT
GGTTTACTACAAATGCGGTATATGAATAATGTAATTAATACACCATTCAA
AAAATTATAAACACTTCCATAATTTCGAGTCACTAATATGACTTGAAAGA
TTGCTCAAATCTACAGAGAGTGGTCAGAATATCAAACATCAATGCAAAAT
GTACTCTTTATCAAATTTAAAAACTAAAAGTAAATGATATACATGGTTAT
TCCTGTAATTAAGCAAAGATCTATTATTTTCTAAATGTTGAATTGTGAAA
AAGAATTCAGCTATTATTATTATTCAATTTTTCCCAATTCGTTACGGAAT
GGGTTCTCTCGGAGAATAGTATTTCCAATTATTTTTCTATATGACTTATT
TCCAATAGGCTGGTGTTGATCATGTCATTTTGGCTGTTAGTTATTTATCA
GAAATGCTTGAAAATGAACTTCGCAAGGAGGAAGAAAAGGTTAGCTCCAA
TTTGTTTGAGATATTTTAAAAGCTTACCAACATATTTCTGATCAATTTAA
AAGTTGAGGTTTAGGATCAAATTTCACCCCAAATCTTTCCAAGATATGGT
ATATACTTGACTGGATAAGCTTCCTGTTTAATCATGAAACTTCTTGATTA
TTTTCGGGATTTTTTTGTTTTTATAGTATTTTGTGCAATACACAATTATT
TTAGTGATTCTCCTCATAATTTAGCTTGGTATCAAATTTAGTATGTCACA
CGAAGTTGAACCATTAGGAACAGGTAAAATATCACTTTAAAAAGTCTTTA
TTTCTTTACATCCACTTTCATATTGTGTTAGAAAAATTACAAAATGATTC
ACATTCTTCTCAAAGTTATTTCATAATAACTTTTGTTACCATGGTAGATT
TTTACACCTCTGAGTATTCTTGGATGTTATATTTAACGAAGGAAAGTGAC
TTATATTGATAGTTTAGTGAAACATTAATAGTTTTTCCTTCCATATGTTT
CCCTTCAAGTTATTAAAAAACTAAAAAAGCCTTTGAAAAGCTTTGCTTTA
ACAGCAGAACCAGATAACAAAGAGCTCCAGGTTTTTAATGTCTCATGATT
TGAACTCTATTATACAGATTCAAAAGGGTATAAATGTGAACTTAAATCAC
TGACCTTTATATATCCCTGGACCAAGCTATATCTGCCATCTTTGATCAAA
GTTTTTTTTGAAATGGATGTAAAGAAGCCATTGTAGTGTTAAAAATTAAT
GTCTAACGGCGCTACATCATCAAAAGTATTCCAGAGAAGGTAGATCTAAC
GCTCTCGATGTATTTACACCGCTATTGAGTGGTGCCACCTTTAGGGTACC
ACTTTTCAAAAAACTTAGATCAAAGATTTCGCTTGGCCGGGATTGAGAAA
CTTGGTCCAGGGTATATAAAGGTCAGTGACTTAAATGTACTATATTTGTA
CTGAATGAAAACTTTATGACTCCAAGCAGGAATTTAAAAAAGTGAAATCC
AAAAAAATACATGAATAAATGCCACATGATTATGTTATTTTTTATAGCTG
GTCCATTAGCACTTGCTAAACATTGGCTGGAAGAATCAGATGAACCTTTC
TTTGTTTTGAACTGTGATATTACAAGTGAATTCCCTTTCAAGCAAATGTT
AGAATTCCATAAGAAACATGGAAAAGAAGGAACAATTGTAGTAAGTTCTT
TTTCATTTTTCATTGCCTATATCTTTTTCTCATTCTTGCTTCACTTTAGG
AGGCCTGTTAAGTGATACTTCTGTGTTCTACTATTTTATGGACCTGAGAA
ATCTTGAACAATTACTTTAGATGCTATGCTAAAATTAGATCCGTAGAATA
TCTCGTCTGAATACCATCAACGTTTATATTTAGCGTATAGGCTTATTCCA
TTTAATAATTTCGAAATCATTACATTACTTTTTATACTATTGAATATTTA
AAGATTCAAAGCAATTGTTCCCAATTATTTCCATCGAGTTGCCGTTTCAA
TGAGTTTCTCGTCGTTATTATACATGGGTTAGCATTTTAACATCTCTTGT
TTGCATATTTAGGTCACCAAAGTAGAAGAACCTTCAAAATATGGGGTTGT
CGTTTATGAAGAAGACTCAGGCAAAATCAACAGCTTTGTCGAGAAACCAA
AAGAATACGTCTCTAATAAAATCAATGCTGGAATGTATATATTTAGCCCG
AGCATATTGAAAAGGATAGAGGTGAGGCCATGTTCATATTTCTTGCTTTT
TATTTCTTCCCTTCCCTTTCTTTTGTTTTTTTTTCAATATTTCTTTATTG
CCTTTTCTGTAAGAAAAACTGGGCACTGACACTCCTTTTCAACCCCAGCG
TTTTCCTCAGCGTTTACCTCAAGCATTTTGATACATTTTTCCAATTTCAT
GTCAAAGCCTCAATTCGGGTTTTGTTTTTAAAAATAGATTCCTCGATGTA
ATAAGTATAGTTGAGGCTCAATAATTCATTCTTCATTGGGAATTGGATTT
TCATTAAGTTAGAGAGCTTATCGAATAGTAGTAGAGTGTCGTTTATGAGA
AGTTCTTGTTGATGGTAACTCTCAATATTATCGAATAATGAAGCGTATTG
AATAGTAGGACGTCGAATTAGAGAATGTCCACTATACTCTAAAACTTTAT
GATCATTTTCAGCCAAGACCAATGTCAATAGAAAAAGAAGTCTTCCCATA
TATGGCAAATGATAGCCAGCTATATTGCATGGAGTTATCAGGTACATAGT
TTTATGAATTTCTTTATTAGAGTAAACACCAACTCAATAGTACAAGATTT
CAGGGGGAGTACTAGGATTGCGAGGTGACGGGCATGTTCGAGCCAAAAAC
GATCCTTTGAGAGACTGAATTTCGAACATTTTGACTCTTTTTGACGTCTT
AACGGCCAATTTTGAGTCGATTTTTCTTGATTTTTTCAGAGACTTTATTG
CTTTATGGTCTATGTACCCCTTTGATAGATTTTCGATGGTGTAAAAAACG
ACCCTTATGGCTCGCACATACCTGACACCCATTTTGTCTAAATTGCCACC
CCCCCTCCTCCTCCTCTCCCCCTCCTCCCCCCTCTCCTGGGACTAGGTTC
GAACTCAAAGAGCAGAGATAATCTTTAATTTCAAGAAACTTGTGATTTAG
CGGTGTAGTTAAGGGTTATTGATCGATATCTTTTGTTTTCAATTTAGGTC
ATTGGATGGATATTGGTCAACCAAAAGATTTCATCACTGGAACCAAATTA
CATTTAAATTCATTACGGAGGAGAAATGCGGAAGTCTTATACGATGGAGA
AGGTGTTCGAGGAAATGTTTTTACCGTAAGGATATTTTCTTGGTCATTGT
GTTCGATAGGATTTCGCTCTACGCGTGTGCATTTGAGGGAGCACTACTGG
GTCTGAGTGCCAAACTATTCTTCGTACCGGGTGTCCCAGAAAAAAGTTCC
TCTCTTTGAAGTGAGTTTTATTTCGAGTTCTATCGACTTATAAAGAATCA
ATCATTTTGCATTGGAAAGAGGAAGGATAAACTTAAATTATGAAGGGTCA
TTTGTCAAATCTGGTCAACTTAATCAAAAGATCTAAATGCTAAAACATTA
CTTTTAAAAAAAAGTCGGTCAAAGTTGACAGAAAAGTATTGTGCTTCATT
GTTCATGTTTTGTTCCAGGATCCAACAGCTAAAATCGAGCCCGAATGTCA
AATAGGACCAAATGTCGTTATAGGACCATATGCCGTCATCGAAAAAGGTA
CGTTACGTTCTTATATAGAAATCTCATTTTTCAGTAGGCAAAAATGTAAG
GAATGTCGCCCCGCGATTGCCGATGATATTGACCCTGTCTTTGGTTAGTT
GTATTTGTTCATCACTGACCCTGTGTTCGTGACACAGCAGAGCTAGGGCG
TATAGGTAAAATTACTCTATCAAGCTTGGGAGAACGATTTCTCTCACAAG
CCTGGATGAAGTCACACTCGCTTGCCAAATGAATCGCAGCACCTAGTGAG
AATCGAACCCTGGCCTTTATGGAAGCCAGGGACGAAAACACTGCTATTTC
TATAACTAAGCAAATCATTCTATTTTATCTTCATTTAATTATTTTAAAGG
TGCATGTTTATCCAATTGCATAGTCATGAGAGGGGCGACCATTCGATCAC
ATTCCTGGGTACGAGATTCAATTATCGGATGGAAATCAACTGTCGGACGA
TGGGTAGGTGTATTATTGTGTTTTTTATCAACTTCTTTCTTTTACACTTT
TCTCTTAAAATTACCTGCTCCTCGGGAGACTGCTGATCTACCGATTCCAG
ACCATCTAAAAGGAACGACAAATAACTATTAAAAAGCGACAAAAAGAAAG
ACTAACCCTAACTATCAAAGAACGACATATTTCACCGTCCCAAATCCCGA
TCTTGGTCAGTGACTACCATCTCTACACATTCATTACTCTTTGTACTTTA
CGCTGTTTAACGACTAGTGGTTTAAAGAACGATAAATCACGCTTGCCTAT
AAGTCTCAATTTGGGTGAGCTGGAAACATTAGATGAACGAACTCTTGGAA
ATAGCCGCTGTAAAATGAATTGCCTGTATTCTTATGTAGTTTTAAAAAGA
AAACATTCCATTGTGATGGAACAATCAACTTACAAACGCGCCCCATAAGT
CTTTGCAAACTCAGCATTTTTTAATTGCCATTCAGACGTCATTTTTAATA
AACGTTTTTTTTTTGGGGCATCTAAATTTTTTGAAGCCTTGGGATGTTCT
TAACTTTTTGGGTCTAAAACCTAGAAATGTTCTTAAAATGTTCTTATTTT
CACAATGTTTCCCCATTTTTCTATCAAAGCGAGTGTTTTTGAGTCTTCAA
AGCCTTAAAATGCTCTTAACTTGTTTTTATCGAAGCCTTAAGTTCTTATG
ATAGTTTTTTCTTATAGAAAACGTGTACTGACAATGCATAGCCATTCAGA
CGTCATTTTTTATACTGATAATGCAGCTCTAATACCTCTTTTTCCTTTCA
TCAGGTCCGTATGGAAGGTGTATGCGTGCTTGGAGAAGATGTCCATGTGA
AGGATGAGATCTATTTAAATGGAGCTCGTGTGCTACCTCATAAAACGATA
TCAGCCTCTGTTCCCGAACCCAATATTGTCATGTAGACTGGATAAGTTCT
TTTTAACAACGTCTGTCAGTATTGTTGTCTCATGTGAAGCTTTCAAAGTT
TAAAGATTGAAACTAAGGCTTCTCAGTTATCAATTGGGTATGTTCTAAGT
CTTTTTCAAAGAATTTGTTAAGGAAGACAAGCTGAAGACTTTCAACTTCT
ATGAATATTATTTCTTTCGTTTTTAGAGTAAACCCTTTTGATTTTTTTTC
TAACTATAAGTGACGGGGCCCTACTATTCTTATTTTTTTGTAACGGTTAT
TATAAAGGGTTCTGGGTAGGATATTTTTTAAATGAATTATGTGTTATTTA
ATAAACATAAAAACTAATAGTTAGGACAAGCAACTGGATAAATTTTTGTT
CAAATGTATGGCTACAAATTTACCATTTCTATTCATGATATGCACCACTG
GAGAGCCTTCCAAGAATTTTCAAAAAATTCCAACCAATGTGAAATTTCTC
AGAAGACTCTCCAGTGGTGCATATCATGAATTCTACCGCTTATAAGCGTT
GAAATGTATTTATCAACCTTTGCGTTGCAAGAGGATTGGGGCCGAATTTT
TCCAGGGTTGTGTGATGTCAAATGTTGTTGTTGCTGGCCAATGCATGATA
TGTACCATTGCAATATCTTCTGGCATTACATTATGGAACCAACAGCTGAT
TGGTTGCAATTTTACGTCACTTTCAACCAATCAGCTGTAGGGTCCGTAGA
AGACATTGCAATGGTGCATTTCACGAATTGCATTATGAAGTCATTCAACT
CGGCTGACCTTTATATACCCTGGACACAGCTTTTCGATACCGGCCAAACA
GAATCTTTGATCGGAGTATTTTGAAAGTGATATTTTAATGATTTGTAAAT
TGACCCACATTGAGAAGTGCTACCATTAAGGTTCCCTTTTTCTAAACTCT
ACAGGACAGTGTTCAACCATTGTAAACTTCGGCCGAATCCTTTTGTGTGG
TTCATAGTGGTATAACACCATGTTCGCATATAACGGTTCAGTTTCGCTCG
GAAACGAAATGAAGCCATTCTATTGGTTAAAAGTGACGTAAAACTTAAAT
TTAAACCAATAGGACGGCTTCATTTCGTTTCGGAGTGAAACGGAACCGTA
TTGTGCGAACGTGGTCCAAGCTATTCTTCATATGTTTTATCAGCTTATTT
TGATATTGCTGGTTATAGCTAACTATTAGTTTTATCTTATTGTCTTATAT
CTATAGCTAAATTCAGGAAAGTCCTAGTCAAAGACTTGC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_003035	XLOC_003035	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000052	supercontig	sc0000052:333504..341742 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.5636	11.9894	12.2823	9.49686	2.63119	28.4763	120.573	115.483	18.6927	17.0953	5.65603	13.3179	5.42643	5.79485	3.40559	3.09458	12.4772	7.36571	4.98053	1.49583	8.19104	3.12311	4.68562	4.68754	34.6714	28.2376	7.82982	7.44558	4.39082	3.42936

Blast

[Close]

BLAST of TCONS_00005334 vs. Swiss-Prot (Human)
Match: GMPPB (Mannose-1-phosphate guanyltransferase beta OS=Homo sapiens GN=GMPPB PE=1 SV=2)

HSP 1 Score: 469.159 bits (1206), Expect = 4.313e-158
Identity = 241/360 (66.94%), Postives = 292/360 (81.11%), Query Frame = 1

Query:  142 MKALILVGGYGXXXXXXXXXXXXXXVEFCNKPTLLHQVEALAAAGVDHVILAVSYLSXXXXXXXXXXXXXXGIKFSMSHEVEPLGTAGPLALAKHWLEESDEPFFVLNCDITSEFPFKQMLEFHKKHGKEGTIVVTKVEEPSKYGVVVYEEDSGKINSFVEKPKEYVSNKINAGMYIFSPSILKRIEPRPMSIEKEVFPYMANDSQLYCMELSGHWMDIGQPKDFITGTKLHLNSLRRRNAEVLYDGEGVRGNVFTDPTAKIEPECQIGPNVVIGPYAVIEKGACLSNCIVMRGATIRSHSWVRDSIIGWKSTVGRWVRMEGVCVLGEDVHVKDEIYLNGARVLPHKTISASVPEPNIVM 1221
            MKALILVGGYGTRLRPLTL+ PKPLV+FCNKP LLHQVEALAAAGVDHVILAVSY+S++LE E++ +E++LGI+ SMSHE EPLGTAGPLALA+  L E+ +PFFVLN D+  +FPF+ M++FH+ HG+EG+I+VTKVEEPSKYGVVV E D+G+I+ FVEKP+ +VSNKINAGMYI SP++L+RI+ +P SIEKEVFP MA + QLY MEL G WMDIGQPKDF+TG  L L SLR++  E L  G G+ GNV  DP+A+I   C IGPNV +GP  V+E G C+  C V+R A IRSHSW+   I+GW+  VG+WVRME V VLGEDV V DE+YLNGA VLPHK+I  SVPEP I+M
Sbjct:    1 MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQRLGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEEPSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAMELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVVEDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIGESVPEPRIIM 360

The following BLAST results are available for this feature:

BLAST of TCONS_00005334 vs. Swiss-Prot (Human)

BLAST of TCONS_00005334 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GMPPB	4.313e-158	66.94	Mannose-1-phosphate guanyltransferase beta OS=Homo...	[more]

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TCONS_00005334 (transcript) - C. hemisphaerica