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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00005297 ID=TCONS_00005297|Name=TCONS_00005297|organism=Clytia hemisphaerica|type=transcript|length=1048bp
CTGCACCAACACAAACTTACCCGAAGGATTTCTACATTTTGGgaatatca
aaaatctttttattcgTATTATTCATGATGTCTATTCTCTTGGATTCCAT
CTATCCTGCTTGTAAGTTGAGGGTATATTTTTTCATCCATTCATCCTTTC
TTGAAATACAGAACCAAAAGAATGTTGTACTTTTTACACtagattttttg
ttcatttttgtaCTGTTTTCAAAAGTGAGGTTTCAATATATTTGTATGAT
GGGCAAATAATCCCTAATCTTATTTCCTAAATGCCTTTGAATATACATGT
TCCAGGCTCACAAAGATCGTAAACCATCTGACTGGTTGATGTGTGGCACA
AGGTTTTTAAGGATCTTCTAAGTGTAGATAACCATGTATTTTTCTTGTCT
TTGTTCCAGCAAACAGAGTTTGAATGCCTTCAATCTTGACCAATATGTCT
TTTCAGGGTGGTggatttttcaaataaagctcCTGGAAGGCCAGTGCACT
GTGCGATTTTGAGCTCAATTGTCACCCACGTGGAAATGAGAATCTTATAT
ACAAAACCACGGTAGAGAGTGCCTGCTGCAAAACAACCCATGGCCCCAAT
AGAccctttttcaaagaggacgtcctgttaaataattatgtagtccagcc
atgaaagcaatgatagagccatgcataattactgtatcatgcatattgta
ataattatgcatggttttatcattgtttttctgctggactacataattat
tcaacagggtggcctctttgaaaaaaggtctatataacAAGCAAATTACA
TGCTTGCAATTTGCTTGTTATATTGGGGTGATGAGCGGTTTGTGCAGCAG
GCACTCTTAATTGTTTCTGCATAGCGTCAACCCCCCTGACTTTTTTTGGT
AGGGCAGCAACAAATTCGCAATTTTAGTAAAATAAAGTTTGGGGTGTTTG
TCTTACCGGATAGaaagtaccgtcaactgctccaacttgggacgagtgta
cgcaacatgggacttattgatatctggtctgtattttcacttactgta Run BLAST on NCBI transcript from alignment at sc0000052:608194..609241+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00005297 ID=TCONS_00005297|Name=TCONS_00005297|organism=Clytia hemisphaerica|type=transcript|length=1048bp|location=Sequence derived from alignment at sc0000052:608194..609241+ (Clytia hemisphaerica)
CTGCACCAACACAAACTTACCCGAAGGATTTCTACATTTTGGgaatatca
aaaatctttttattcgTATTATTCATGATGTCTATTCTCTTGGATTCCAT
CTATCCTGCTTGTAAGTTGAGGGTATATTTTTTCATCCATTCATCCTTTC
TTGAAATACAGAACCAAAAGAATGTTGTACTTTTTACACtagattttttg
ttcatttttgtaCTGTTTTCAAAAGTGAGGTTTCAATATATTTGTATGAT
GGGCAAATAATCCCTAATCTTATTTCCTAAATGCCTTTGAATATACATGT
TCCAGGCTCACAAAGATCGTAAACCATCTGACTGGTTGATGTGTGGCACA
AGGTTTTTAAGGATCTTCTAAGTGTAGATAACCATGTATTTTTCTTGTCT
TTGTTCCAGCAAACAGAGTTTGAATGCCTTCAATCTTGACCAATATGTCT
TTTCAGGGTGGTggatttttcaaataaagctcCTGGAAGGCCAGTGCACT
GTGCGATTTTGAGCTCAATTGTCACCCACGTGGAAATGAGAATCTTATAT
ACAAAACCACGGTAGAGAGTGCCTGCTGCAAAACAACCCATGGCCCCAAT
AGAccctttttcaaagaggacgtcctgttaaataattatgtagtccagcc
atgaaagcaatgatagagccatgcataattactgtatcatgcatattgta
ataattatgcatggttttatcattgtttttctgctggactacataattat
tcaacagggtggcctctttgaaaaaaggtctatataacAAGCAAATTACA
TGCTTGCAATTTGCTTGTTATATTGGGGTGATGAGCGGTTTGTGCAGCAG
GCACTCTTAATTGTTTCTGCATAGCGTCAACCCCCCTGACTTTTTTTGGT
AGGGCAGCAACAAATTCGCAATTTTAGTAAAATAAAGTTTGGGGTGTTTG
TCTTACCGGATAGaaagtaccgtcaactgctccaacttgggacgagtgta
cgcaacatgggacttattgatatctggtctgtattttcacttactgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00005297-exon-sc0000052-1491911889:608194..609241 | TCONS_00005297-exon-sc0000052-1491911889:608194..609241 | Clytia hemisphaerica | exon |
| TCONS_00005297-exon-sc0000052-1510915933:608194..609241 | TCONS_00005297-exon-sc0000052-1510915933:608194..609241 | Clytia hemisphaerica | exon |
| TCONS_00005297-exon-sc0000052-1575043694:608194..609241 | TCONS_00005297-exon-sc0000052-1575043694:608194..609241 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000052 | supercontig | sc0000052:608194..609241 + |
Blast
The following BLAST results are available for this feature:
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