TCONS_00005289 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005289
Unique NameTCONS_00005289
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1748

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005289 ID=TCONS_00005289|Name=TCONS_00005289|organism=Clytia hemisphaerica|type=transcript|length=1748bp
CTAAAGTTTCACATGAAAACTTACCATTACTTGGAGGTTACAATTTGCTT
GGATTTTAGGCCAATAAAGATCACATGGACCCGGATTAATGGGATTAATC
caagaaatttcgaaaattttatcaaataagtcGAAAGTCCCCCGTCCGGC
TGACATCACATGCGGAAATAGTGGCCTCACAACCCTCAAAattttatgat
gaaaaaattCGATAATCTTGTTCAAAGCGTGTAAACAATCTCACGTGTAA
CCAACGTCCTATCACAGAAAGCGTCTTACAGTTGACCTTTCTTCAAGAGA
AACAGTGTGTGTTGGCTTGGTGGTATCATAAATCCAGTCAAAATGTTTAC
taaatttgctgaaatttcccaGACCAACTTGTTTTCTTCTCCATTCAATA
AAGCATCATGCGATGCTCCAAATTCAATTATGCCTGCTATCAAGGAGGga
gATAGCTGTGAATTCGGTTCATGTAAATACTATGCTTTGTGTGGATTTGG
TGGCATTCTGTCATGTGGTATCACTCACACCGCTGTTGTACCTCTTGATT
TGGTCAAGTGCAGAATTCAAGTCGATCCTGCAAAATACACTGGTATCTTC
CAAGGTGGTCGTCTCACCATTGCTGAAGAAGGAGTCCGTGGTCTCGCCAA
AGGATGGGCTCCAACATTAATCGGTTACTCCATGCAAGGTTTATGCAAAT
TCGGCTTCTACGAAGTCTTCAAGATCCTTTATGGAAACATGATGGGTGAA
GAGAACTGCTACTTGTACCGTACATCCTTGTACTTGGCTGCTTCTGCCAG
TGCTGAGTTCTTTGCTGATATTGCACTTGCTCCTATGGAAGCCGTCAAAG
TCCGTATTCAGACCTCACCAGGATTCGCCAACACTCTCCGTGAAGGTGTA
CCTAAACTATACAAAATGGAAGGCATCTCTGGATTCTACAAAGGATTGCC
ACCACTCTGGATGCGACAAATCCCATACACCATGATGAAGTTTGCTTGTT
TCGAACGTACCGTCGAAGCCCTTTACAAGTACGTCGTACCAAAACCACGT
GCTGACTGCACCAAATCCGAACAATTGGTGGTCACCTTCGCTGCCGGTTA
CATTGCTGGTGTCTTCTGTGCCATCGTTTCTCACCCTGCTGATACTGTCG
TCTCTAAATTGAACAACTCTGCCGGTAGCACTGCTGTCCAAGCTGCCCGT
GAATTAGGAATGAAAGGATTATGGAAGGGATTGGGACCACGTATCATTAT
GATTGGTACATTGACCGCCCTCCAATGGTTCATCTACGACTCGGTCAAAG
TTGCTTTCCGCCTTCCACGCCCACCACCACCAGAGATGCCAGAAAGCTTG
AAAGCTAAGATGAACCAACAATAAAGCAAtcgattttttaatttatatac
AAAACGACTGATTTGAGCGGAAAACGATGAAATGAGAGCTGTTCTGTTTT
CTAGttgcatatttttttcaaaatagtcttcttttttgaattgGGTGTCC
TTGAGGGAAGCCTTTTTTAAAAAGGCGAGAAAATTACAAAGCTGGCAATG
GCTGTATAAGAATGTAAGTAGTTGTATGTGTGGACTGAACGGGAAAAGAT
GCAGACACCCAGAACATTAGCGTTATGAAATGTTGTTTGGTTATTTTGAC
CAATATAGTATACAAATGTTTTTGTGACCATGAATTTAGGACTGCTTTTA
CAAATTGTATAAATATAATTGTGTCGATAgtagaaatacaaagaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000052:342356..357882+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005289 ID=TCONS_00005289|Name=TCONS_00005289|organism=Clytia hemisphaerica|type=transcript|length=15527bp|location=Sequence derived from alignment at sc0000052:342356..357882+ (Clytia hemisphaerica)
CTAAAGTTTCACATGAAAACTTACCATTACTTGGAGGTTACAATTTGCTT
GGATTTTAGGCCAATAAAGATCACATGGACCCGGATTAATGGGATTAATC
caagaaatttcgaaaattttatcaaataagtcGAAAGTCCCCCGTCCGGC
TGACATCACATGCGGAAATAGTGGCCTCACAACCCTCAAAattttatgat
gaaaaaattCGATAATCTTGTTCAAAGCGTGTAAACAATCTCACGTGTAA
CCAACGTCCTATCACAGAAAGCGTCTTACAGTTGACCTTTCTTCAAGAGA
AACAGTGTGTGTTGGCTTGGTGGTATCATAAATCCAGTCAAAATGTTTAC
taaatttgctgaaatttcccaGACCAACTTGTTTTCTTCTCCATTCAATA
AAGCATCATGCGATGCTCCAAATTCAATTATGCCTGCTATCAAGGAGGGT
GAGTCTTTCAGTCCAGTCTGTATTATAACAAATGTTTCTAAATTTCAGTT
ATGATATCCCTTATATTTGGCTTTTGCGAAGGAATCCCTGAATTGGTTGG
CAATGCACCCTTTTTATAGAAGTATTATTTTTTCCTCCTCGTGAAGGATG
GGTGATTCCAAAGTTAAATTTAAAAGTTAGCTACAAACGCTCAAATGTCC
TGCTTGTTTTACTTGCATCCACTGAAGTATGGAGGAATTGTTGTTATATG
ATAGACTGTTGTGTTTGCCTAAAAGTGTTTGGTCTGAtggtaaaaagttt
tcccaTTCAACATTGGACATTTCATGCCCTGTGGTGCTTTACTAAGTTAA
GTGCGTTGGACAGGGTCGTTTCTGGGTGTGGCTTGACCCAGTTTGCAGTT
TTGTCAAGTgcaagtgaaaaatttgaagttttcaGGTGCAAGTGCAGACA
GTTTTTTAACTCCAGGTGCAGAGTTCTGCTATTTTCTCCTCAAGTGcagc
taattttagcaattttttgcctATTTGGGTTGCCTATTTCCATGGTAAAA
TTTATCAGGTGCGCTCTACCAGTGCGGAACTTTGTATattcagtcaggga
aatccctcaattgtgGTATACAGCAATTGCAGTACCCTCAACtactccaa
cttgggactatcttacgcaacattccaccaccatttcaccgaacctccaa
agtcatttgatttgagttcaatgaaccgcgtattaacACACGCGAATATG
AACGTTTGAAGTCACTCAcgcagcaagttacacactcgctNtaactatgg
gcgagcaccccattgctaagatgttggcttgaaatcaaaaatgaaaccac
tcaaaacaaaaCTAGAATCAGCCTGTACTTCAAAATCTCGTAATCTTAAT
GTACGAGTTTACATGGCTCGCACCCCTCCCCCCGCCTGAGCtagccattc
cagggtcaaattaaaattattctggtggcaatcaaacctagttcatcttg
tagagcttcaaaaaagaaaaaaaatgaggggtcatacacctcctaatgat
aagcggttcCTGCAGGTTCCTGAGATAgagattttggttccgctaaaata
gcacctttttagacatttgaggttgacaatttagcccagaaatggcatat
ataatggcaccgaaatatgctgcaaaaattgaaaattcaagcttttgtat
tgagtcaagatattccagatatcttcattttgactgcatacttttatcaa
attctttttgtaatggcttgctaacacttcaaggaagaaatgaaaagaca
tttttttttgaaaaagaagacattgcattgcataaaacaataaaaacgtt
ataaagcggaagttaaaattgctgaacctacctatctttgtaatcaaagc
gctgtggaggaaaaattccccatggcatataAATAACTNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggctgaaaatgctt
gccaaagtatgaaaagtaaaaaataataactttaatgaaagaattaattt
cagagagtagcaccattggatttctcaggtattttctgacaaatatggaa
agtttcattgtctgaacattttttccttcgcagcgctttgaaatcaaaga
tgagttgtgaaattttttgtgtcccgcagatctaatttttctaaaaatgg
ccttagttggaacgaatttttagataaaagtgtagaatattacacctgca
tattatatatggttggaaagctaaaagaaagctctaaattacacaaaaat
aattaattttatagctcaactacacaaagaacgattgcttgtcaaagttg
gacctaaaattgaagattttcatgagcgtcaaataaaaaacaagcagaCC
CGGAATGGCTATCTCTACGCATGTTTAcacgggtaaacaaagaagattta
ttaCAGAAAATGCTGCCGCCCTCAATACTTTACTTTTGGATACTTTTGGA
TTGGATGTGTTTGAGCGTACCGCTCTGGCAAGAATCTTTTGATCCACACC
ACAATCTACATTCAATCCATAATTCCTGAAGGAAGAAATGGATCAGCAGA
GAgatttcatgtctaaaattgAGTTTGAGTCGACTCTCCTGCACCCTGTA
TAACCACGGATTTGGGGTTCATCGGGAATTTTTTGCAAGTGTTTGTCAAG
TgcatttttgaatttgtcaacAGTTAAATTTTTCANNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAGAAATatttagaattct
ttttgattGATTCAATAGCTTTATTTTCCGCAAACTTTTTTGAATCTTGG
AaggatttttgcaattttttttcgatttgtaGCAGCTCctcattgatttt
tttctttcaggttTGAGAAATTgtgagtaaaagtttttttgtgatttttc
tccGTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTCTGGTTGGTACATTATCTTTACAGATTTTGAAACACAGGGCATTTATG
GTTTCCAATAATTCGTTTGGGTCGTCACTAAGTGTTTCCTTCCACCTGAT
ACGATGCAtggtttcttttatattttcccaGTCTATTTCATCAGCAAAGA
AGTTCAGGGTGCTAAAACCTGTACGAGGTTCTGGCTGCTCATCTTCATCT
GATACAGTGTTAACATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNTTGGATTGAATTGGTTTTGATGTGGTAGATTTTGTAGA
TGTCTTGGTATTGGTATGGGTTGAATTGGATATTGTGTTGGAAATGAGGT
TGGTAGAGGTGATTGGTCAATCCTACAACTGCAGTGGGCGTCCCGCCCAT
ATATCTACCAAACCGCCCTGaccgccattttagttttttgcaaaatctag
cgccactgtagaaattgatctttattttttgttcgcaaaagatgcgaagg
gttgaagcgaagcaaaattttttattttgagagagcatgattggcagaaa
tggtggataaggtgctgttgggaaaataatgaataatgaataatgaaatc
atgccgcatctatttttgggtaagttcacgacggtaaactcatatgtaaa
tttcatcggcccTATTTGTTAATCTCATTGGGCGGTTAGGCGGCGAACGT
TCTCTAATCCTACATTCGGCGTCCGataattttaaatgaaaacaaaagtt
aaaaagggcgcgctattactgaaagttatcgtgacatgttatgacagaaa
gtatgattgataaacttgttatcaaaacaaatttgttgtcaaaggaTTTA
Acaataagtgaaaatacaggccagatatcaacaagtcccattttgcgtac
actcgtcccaagttggagcagttgatggtaccgtgagaggtcctaaagcc
gacaccactgcctaattccaaccccccccaATAACTGTTAttagaaaaaa
ttcaatgtttacaaacatcagtgtttgctgaaaaatttattcttgaaatg
gcgtaaaaacagcaaaaaaatgcaaaaacaccttaaaagagatgatattt
ttaaaaagtttaatttggcgggaatttaatttggcggattgcggggaaaa
aaattttggcatgaacttaatttggcaaattctggccaaatccgccaaat
tttctttctgccaaaatttcttcgttTAAGGTAGTTTTCATTTGTGGTTA
GCCTGCGAAGGCTTATAACTGCTACATATAttgctggtcgacaaagataa
acaaacatcgactgCAAAAAATTGTACgagaagaaagcttttctttatta
aaagaatctgatatgcggaaaaaatattttgtctatgcgttaaaaagata
tgatgaattatgtacaaaagttgtctgttttctccttgaatcctgaattc
tgtttcttgaataTACTGCAGTCTGGAAAGGAGGGAAATGTTATGCTGGA
GCTGCGCCAACTTAACTGGGAAAAGTTGAAGGCAGCAGATCTCAAACCTC
AAATCTACGCCGGAGATCTCCGGCGCACAAACCGCAATTACCAGACTGga
atatactgcaattgcagtatatgaaaatttaaaagtgacgtttatacTGC
AATTGTAGTAAAAAATTattaccgcaattgagggatttccctgactgaca
TTGCAGTTAGGAGAACCATCCAAACTCAGACTTGCCACAGAAAATGTCAA
ATAGACATTTAGGGGGTAGGGGTATTATTTGTTGATTTTAGAGAAGTTCA
CTCCATGCCAAATGTTACTTTGTcgtgtttgttttttattgctTTGGCTG
TTTTGAAAACTTTAACAAACGGCCCAATGCTTATGCTTTGGGTTCTCTTT
GTTTGACAGCCCGTGCGCTGCTGTGCAGCCCGTAAATTTTTCATCTGGGG
TAATTTAAATTACGGGACGCTTTTGACTTATTTGGGCATTACTCTGAAAG
TATTAATCTTAGAGATCcgatcttttgatattttattcatCAAAGTATga
ccttttcacttttttcccaTTTGGGGGTAATAACAGGACACTTTAATCAG
TAATATTTGTATAGAGCAATCTAGACCAACGGAGTATATTTAGATGCAAA
CCTTTGCAGGTTTTGAAGGACTTTGAGTGTAGTTATGATTTCATGAAACT
AGAAAATCATGTTTGAAGTTTTCTTATTCTTATTTTCTGACACAAAAGCT
TGAATAGTTCCTTCTAAAACtatgaaaattcatttttatggTGACATGTG
aaacttttgttgaaacatCAAATGTATGTTAGAATGATCTAACTAGACAT
TTTCTAAAATATCCAAAATCTAAGTCCaaattgataataatataataaca
cCATTTTCAGGGGCGAATTTACCTCTTTATTTTAAccgtcccgtaattac
cccagatgactatacacggacacaataaaaaaaatcataacaacactcat
aaAAAATAAGTGTGTGtctctttctgtttatttttcatcaaaaaaggcAT
TttatgcaatgtcttcatttgaAGTGACGTCAGTGCGATAATTTGGTTTT
GAACATTTAACAACACTGGAATGGTCTCAATCTTTTTCTGCCGCCATCAC
AAACGTAGACCTATCCCTGCCCATGTTTTGACAAGCAAATTTAACTATTG
ATCACTGCAACTTAATTTTTGGTTTGAAGGTACCtaagatattgtatttt
ttctcctctttattttaacttttcaatCAAGCTGTCTTGAGGTTTTTTCA
ACCACCCCTACAAAAATGTGTATTTAAGTTTGACAGGTCTTTTAAGAGCC
ACTGTCTGTAAGAATCAGATAATATCAGCTAATTGaggaagtgaattttt
ttaaattggctcattttgatatattttgttctAATTTATAAACTGAGAAT
CCACTGAAAATGTTAGGGTCTCAAAGCGATTCTgatgtttaaattttcaa
agttgagcAGTCTCAGccaacaaaaaatcaaaaatttggctaaataggGA
TTTTGACCTCAAATTGTGCTTGAAGAATGATAAACAGAAACAATATTAAC
ttgataatttgaaaatatgtacaacttttaacagaaaaattcaaaatttg
taacATGCAGATAACCGGTTGTTTAAAAAACATGAGCCCAAAATCAGGTT
TTTAAACAATAAGACAAAGTTTGAGCCATTTTTGAGGGCAAAAATCAAAG
CTGAAAAGCTTATCACTTCCCAAAAGTATCCTCAGGTTACTgctggaaaa
caaaaaaaaaggagCCATCAACCTCTCTGATTTTTCAAATCGGCAGCCCA
AAGTTGAAATTTTGGAGTTTTTTCTGTATGTTGCATTTTTGGCGCCATTT
AAAAAGACGCAAAGTTGGAAGGGGCTTTGGGCTTTTGGCCCAAAAATATA
CATCCAACAACTTTTTTTACCTAAACTCATGGTTTTAACAAGAACCATTT
GCCATAGCCAGCTTATTTCAGGTTCTCCAGTGAACCAACATATcctattt
tttggttaaaaaccgACATACTGTAGTTTAATAAAATAATCTTTGAGctg
aaagctctcaaaaatatcaaaaaacctCTTTTTTCTGAGTTCAGGTCCTG
AAAGTACTCCCAGAACTGcaccaaaaaatataaaattgagCCACTACACT
TGTTTTCTGTACTGTTgccaaaaaagaattttccttgtattttcaTTACC
AGTCTCCTCAAAAGCGCTATGGGTTGAAAGGTGTATTATATTTTCAACAG
aatgtaattttttgaaaaaaattctttgaaaaaatgccagcaaaacaaaa
acaagcgCATACTTGAAAGGAATGGATTGTAGTTAGCAGTTTCAAggaaa
ctgattttttttttcaaatatcaaattagcttgtgaaatttaatttttca
agaagGGCGGGAGATCTCCTATCAGCCTACACGTAACATAATCAGTAACG
TAATAAAGCCTGGatacacaaaaaataaaaataaaagaattaagGTCCTG
GGAAGGAGGTCGATAATTAACTCTTTCCTCAGAGATTTCCTCTGATTTCA
GAACTTCGGTCTTCAGCTTATCACTTCTTTTTGTGTCTTGTGCattcctt
ttgtttttaattttatatttcttTCTTCCAAAATGTATATTGGGTTTTTG
TTATAGAATGTCATGGTTAGTCGCTAGTTTTTATAACTTCACTACATCTC
AAAGAATCAAAtggattttgattgtttgatagCCAATGAGGTTtgaatta
atttgatttttaaaaactaaAGGTATTTGTCGGATAGGTcgtatttaaat
tttcaaaagtcttGAGTCTTTCAGGTCTTTGACTGTTAGTGTAGGTTTTG
GGCTGCTGAAAACTGTTTGCACATTATATCTGTAGGTATTGGCTGTCAAC
ATGGGTATTTTGCTGTTGCAAAGTTAAATTTTTGAAGGTGGCGCCGACAA
AGCAAAAACTCAGCGTCAAAAACtaaatgtcaaaaaagaaatgtgaaatt
gattcagattgattactcttaggttccaggaaataaacagggggggttgg
aaaattttcaaaattttgataaatggggggacctaattgccgggggtcAG
AAATTGTACACctaaaacccaaaaataaggtaaatataggctaacattag
gctatttagagcaaaataaggggccttctctttcaGGGGGGATacagagg
cagggtactaaccaactggtactaacccatagggtactaacttgattttt
tactaaaattttgtttagtaccacccacccatatttagtaccAGGTACtg
cttcatttttgctgtataaaatagggaaaaaaatagggacaccaccccta
aatcttaaattttacagattagaccaaGAGAGGGGTACTATTATTAGTTT
TTCACACTGAAAATCGACAGATAATTCAAGCAAACTATCAATGATTGAGT
CAgaagcttttgtcctttgattttcatcacacttcttgaccattttggaa
gttttgtcttcaaaaaatttctcaaaagagtaaaaaaaaattgtcgatta
aaaaaatttcatatcaaaaaaattaatatttgaaaaaagtcaaaatatgt
gactccccaagcgatttgaagtacataaAAGTCCGATTGGTAAAAAGACC
GTTCTTGTTTGGCCTCTACTCAACCGGTCTTTTTATTGTTTGGGCCGCTC
AGATATTGAAGAAGGCCGATGCGAGGCCAGCTATTAAAAGCAGCCACAGT
GAAGCGGCCACATAGTAAGTTTTAAGCTGCTAACAGCGGCCATTAGCAGC
CCTtagctttgtttttcaatttacttacattttcaattacattttggaac
aaagaaagattttttcagccagggtGTCAGGTACAGACAGCAGGGACGTC
TTCTTCCATTTCACAcatgtttgaaaaagaaagttcTTGGAAAAATTACA
TTGGCCGCTTCATGGCCGATCTTCTAAAATGTTTGGCCGCTTGAAATTTC
ACTTCGCCCGCTATGAGACCGGTCTTTTACCCGCTTTAGCCGATCGGACT
TTagtgtacttcaaatcgcttggggagtcacaNNNNNNNNNNNNNNNNNN
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NNNNCCCCCaaagtagtaccgggtactaacttttttgaaatgcaaaaata
gacaccaccacctggcTATGGGTCAGTACCCTGTGTCTGTACCCCTCtgt
ctctttgacagctgaaaatattcttaagaattaataaatggggggtccta
ataaggtcccggtggttggaaaattttcgaaaaattaacaaaccaggggg
ggggcgtttatttggaacctaataGTACCTTTGGAAAATCTCCCTTTATC
TggttaataattttttattatctGATCAACTTCAAATGTATGCAAGTTTT
CTTCTCAATAATAACTAAATAACATATATGAGCAGGTTATATATATTGAC
ActagttttcttttttcaggagATAGCTGTGAATTCGGTTCATGTAAATA
CTATGCTTTGTGTGGATTTGGTGGCATTCTGTCATGTGGTATCACTCACA
CCGCTGTTGTACCTCTTGATTTGGTCAAGTGCAGAATTCAAGTAACTATC
TCCTTTTCTCAACATACTTAAAAGTTGCGAAAAATCTGCTTTTATTTCTG
TGTTTCTATTCTTTCAAAGGGAATTTTGCTCAAAGTGTACCTTTGAAAAC
TTCTTAATACTCTGCCTATTTAATTTATCCAAGACAATAGGCAAGATTGG
ACTTGACTATACAAAAATTCTcgacttcagttgagctagaatctggcGAT
GTGTgcatgtctgtctgtctgtctgtcacaaaaactttagggcagccttg
AGACATGAATAATTTGGCAAACTTTGGCaaacttgttccttgggtaagta
tctggggtgtttttttttcattcttaacTTAATTTTTTGGGCCTGGGCAA
TTGGGCCTGGGCAATTGGGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAATACTATGC
TTTGTGTGGATTTGGTGGCATTCTGTCATGTGGTATCACTCACACCGCTG
TTGTACCTCTTGATTTGGTCAAGTGCAGAATTCAAGTAACTATCTCCTTT
TCTCAACATACTTAAAAGTTGCGAAAAATCTGCTTTTATTTCTGTGTTTC
TATTCTTTCAAAGGGAATTTTGCTCAAAGTGTACCTTTGAAAACTTCTTA
ATACTCTGCCTATTTAATTTATCCAAGACAATAGGCAAGATTGGACTTGA
CTATACAAAAATTCTcgacttcagttgagctagaatctggcGATGTGTgc
atgtctgtctgtctgtctgtcacaaaaactttagggcagccttgAGACAT
GAATAATTTGGCAAACTTTGGCaaacttgttccttgggtaagtatctggg
gtgtttttttttcattcttaacTTAATTTTTTGGGCCTGGGCAATTGGGC
CTGGGCAATTGGGCCTGGGCAATTGGGCctataaaaaatttgaagaCTCT
GAAGTTGaacccagtgcgttgcgcacgttagACTATTCAAGAGGGTagga
ttttttttgcaaaatgaagGTGCATTCTTCTTTATTATTTAAACTGTTAA
CTtgacttgaaacttgaaatttgttAAACTCTTCGAGATGCACTTCTATA
ATCATCATCATTATTTTTCAGGTCGATCCTGCAAAATACACTGGTATCTT
CCAAGGTGGTCGTCTCACCATTGCTGAAGAAGGAGTCCGTGGTCTCGCCA
AAGGATGGGCTCCAACATTAATCGGTTACTCCATGCAAGGTTTATGCAAA
TTCGGCTTCTACGAAGTCTTCAAGATCCTTTATGGAAACATGATGGGTGA
AGAGAACTGCTACTTGTACCGTACATCCTTGTACTTGGCTGCTTCTGCCA
GTGCTGAGTTCTTTGCTGATATTGCACTTGCTCCTATGGAAGCCGTCAAA
GTCCGTATTCAGACCTCACCAGGATTCGCCAACACTCTCCGTGAAGGTGT
ACCTAAACTATACAAAATGGAAGGCATCTCTGGGTACGTTTTTACTTATA
TTTTTCTCTCAGCCAATTCGCATCGATGAAGTCTTATTTTTTGCCTTCAT
TTTTTGTGATCCTTCTTTCGGAtgagaaatgaagccacttatttgcTATC
CAAaacgtggttttcacacaaatgtCAGACTGTGAAAGATATCCCgctta
aaataaagaaaaggttAGATTCGATCCGTCATTCTAAATGCAGCGCAAAt
ctttaaggcttcactttttcttgcttgagaaaggttataGATTCCTCTTC
AAACTCAATGGATAAGATAGTATCATCCAggaattcaaagaaattttgtg
acATTTTAAAAAGCTTTCCATCCCTTCTTtatgtttatcttttttatcaG
ATTCTACAAAGGATTGCCACCACTCTGGATGCGACAAATCCCATACACCA
TGATGAAGTTTGCTTGTTTCGAACGTACCGTCGAAGCCCTTTACAAGTAC
GTCGTACCAAAACCACGTGCTGACTGCACCAAATCCGAACAATTGGTGGT
CACCTTCGCTGCCGGTTACATTGCTGGTGTCTTCTGTGCCATCGTTTCTC
ACCCTGCTGATACTGTCGTCTCTAAATTGAACAACTCTGCCGGTAGCACT
GCTGTCCAAGCTGCCCGTGAATTAGGAATGAAAGGTCAgtgttgtctttt
ttttttagtttcaggTCCATAATTAATTAGCTGATTCAATTATTTGAGGG
GTCCTGGAGTTTGTTGTTTCCAAAGGTTTTTGTATTGAATGGAGGTTATA
TATTCTGATTGAAATCTCTCTGAATGATCGCATTGATCCCTGAAATTTTC
TTCTATGATAACATTAATTCTCACTTTCGCTTTTGGCTTTTACAGGATTA
TGGAAGGGATTGGGACCACGTATCATTATGATTGGTACATTGACCGCCCT
CCAATGGTTCATCTACGACTCGGTCAAAGTTGCTTTCCGCCTTCCACGCC
CACCACCACCAGAGATGCCAGAAAGCTTGAAAGCTAAGATGAACCAACAA
TAAAGCAAtcgattttttaatttatatacAAAACGACTGATTTGAGCGGA
AAACGATGAAATGAGAGCTGTTCTGTTTTCTAGttgcatatttttttcaa
aatagtcttcttttttgaattgGGTGTCCTTGAGGGAAGCCTTTTTTAAA
AAGGCGAGAAAATTACAAAGCTGGCAATGGCTGTATAAGAATGTAAGTAG
TTGTATGTGTGGACTGAACGGGAAAAGATGCAGACACCCAGAACATTAGC
GTTATGAAATGTTGTTTGGTTATTTTGACCAATATAGTATACAAATGTTT
TTGTGACCATGAATTTAGGACTGCTTTTACAAATTGTATAAATATAATTG
TGTCGATAgtagaaatacaaagaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003014XLOC_003014Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005289-exon-sc0000052-1491911889:342356..342803TCONS_00005289-exon-sc0000052-1491911889:342356..342803Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1510915933:342356..342803TCONS_00005289-exon-sc0000052-1510915933:342356..342803Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1575043694:342356..342803TCONS_00005289-exon-sc0000052-1575043694:342356..342803Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1491911889:354775..354896TCONS_00005289-exon-sc0000052-1491911889:354775..354896Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1510915933:354775..354896TCONS_00005289-exon-sc0000052-1510915933:354775..354896Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1575043694:354775..354896TCONS_00005289-exon-sc0000052-1575043694:354775..354896Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1491911889:356127..356488TCONS_00005289-exon-sc0000052-1491911889:356127..356488Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1510915933:356127..356488TCONS_00005289-exon-sc0000052-1510915933:356127..356488Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1575043694:356127..356488TCONS_00005289-exon-sc0000052-1575043694:356127..356488Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1491911889:356856..357139TCONS_00005289-exon-sc0000052-1491911889:356856..357139Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1510915933:356856..357139TCONS_00005289-exon-sc0000052-1510915933:356856..357139Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1575043694:356856..357139TCONS_00005289-exon-sc0000052-1575043694:356856..357139Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1491911889:357351..357882TCONS_00005289-exon-sc0000052-1491911889:357351..357882Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1510915933:357351..357882TCONS_00005289-exon-sc0000052-1510915933:357351..357882Clytia hemisphaericaexon
TCONS_00005289-exon-sc0000052-1575043694:357351..357882TCONS_00005289-exon-sc0000052-1575043694:357351..357882Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:342356..357882 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.88287e-08	0	0.00110491	1.23128e-09	0.81434	0	0.475379	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.75193e-07	6.31963e-08	0.537473	0	2.79909e-08	0	6.44701e-10	1.77939e-08
Blast
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BLAST of TCONS_00005289 vs. Swiss-Prot (Human)
Match: MPCP (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 468.389 bits (1204), Expect = 5.988e-161
Identity = 248/358 (69.27%), Postives = 287/358 (80.17%), Query Frame = 1 
Query:  343 MFTKFAEISQTNLFSSPFN----------KASCDAP--------NSIMPAIKEGDSCEFGSCKYYALCGFGGILSCGITHTAVVPLDLVKCRIQVDPAKYTGIFQGGRLTIAEEGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKILYGNMMGEENCYLYRTSLYLAASASAEFFADIALAPMEAVKVRIQTSPGFANTLREGVPKLYKMEGISGFYKGLPPLWMRQIPYTMMKFACFERTVEALYKYVVPKPRADCTKSEQLVVTFAAGYIAGVFCAIVSHPADTVVSKLNNSAGSTAVQAARELGMKGLWKGLGPRIIMIGTLTALQWFIYDSVKVAFRLXXXXXXXXXXSLKAKM 1362
            MF+  A +++ N F++P            ++S   P        N    A++E  SC++GS +++ LCG GGI+SCG THTA+VPLDLVKCR+QVDP KY GIF G  +T+ E+GVRGLAKGWAPT +GYSMQGLCKFGFYEVFK+LY NM+GEEN YL+RTSLYLAASASAEFFADIALAPMEA KVRIQT PG+ANTLR+  PK+YK EG+  FYKG+ PLWMRQIPYTMMKFACFERTVEALYK+VVPKPR++C+K EQLVVTF AGYIAGVFCAIVSHPAD+VVS LN   GS+A    + LG KG+WKGL  RIIMIGTLTALQWFIYDSVKV FRLPRPPPPEMPESLK K+
Sbjct:    1 MFSSVAHLARANPFNTPHLQLVHDGLGDLRSSSPGPTGQPRRPRNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEENTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKFACFERTVEALYKFVVPKPRSECSKPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKRLGFKGVWKGLFARIIMIGTLTALQWFIYDSVKVYFRLPRPPPPEMPESLKKKL 358
The following BLAST results are available for this feature:
BLAST of TCONS_00005289 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPCP5.988e-16169.27Phosphate carrier protein, mitochondrial OS=Homo s... [more]
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