TCONS_00005285 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005285
Unique NameTCONS_00005285
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3802

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005285 ID=TCONS_00005285|Name=TCONS_00005285|organism=Clytia hemisphaerica|type=transcript|length=3802bp
GAATTTCGTGTTTATTAAATTCTTACTTCTGAGctCTCGAGCAGAAGAAT
CGCATCTCAAGtttgagACACACGGCCACGCGTAGAAATCGTTTGGAGGA
TTTACGAAAAGGTAAAGTTACCACAGTCGAGACACGTGACCCCAAAAAAG
ACGTCGCGCCCAACCAAAAGGTTAAAGCGAACAAGAACGTGTATAGAAAG
GGACGTCGTGGAGTTTCACGCAAACAGGGTACGTACAATGAAGAGAGCTC
TGAAGGCACGGTAGATACATCAATCGCATTCGTTTGCATCAATCGGTTGG
CGGAAGAATTCAATACCGAGAAAAGCATCAAAGAGTTTTACAATTTAGAT
GCACAGAATCGGCTGCCGGCACAAATAGTTACCATTGACGACgatgatga
taatgatgatgGATCTCCAAAGAAAAACGATGCAACCACGACATACAGTG
AACAAGATCTCAACTATCTGAGCTTAGTACGTGTCAAACCTAATAAACTT
TCCAAAACTGAAAGTGAAATGTTTGATAAAAATCTCAACGAGCATTCTGC
AGAAGATGTAGAGGATGATTTGACGTCACAAGGGCGGGGTAAAGGGCGTT
CATTGAACAGTGTCATCTCTATGTTAACCGCCACGCGTAACCAACCACGG
CCCTCCCATCTACTTGAACAATATAAACAAAGTAAaaacaagaataaaca
aacaaCACAATCCAAAGAGAACATCAATGTCATTGATCTTTCCAACGATG
ACGCGCCATCTGCTGTTAAAACCAATATTGTGGAATCGGCACCTGATGGC
TCCATCAACATTCCAGGAAAAGGTCAATACAAGATCATGGAACAAATTGT
CACCAAACAAGGTGATCGCAACAAAATCATCTTGCGACTCGGAAAACCGG
TCAAAACAAACCAGCCAGTGGTGGAAAAGAGGAACAAATCGAAGACGACG
GTCAATTCAAACGCCGTGTCACCTTCACGTGACATCACGTCACCACGTAC
CTCCGTCGATGATATGTACACGTTAGAAAACATGGTACACACGCATCAAG
GCTTGGATGAAATGCTCCGTAACCGATTCAAGAAAGTACATACGTTTTGC
GCTAAACTTCCACGCAACCCGCTGATGTGGACAAGGAAACACGTCTCGAC
CTTCATCAATAATGCTAACTTCGCCAAATATGCTTCCAACTTTTCCGAAC
AGGAGATTGATGGACACGCTTTGATGTTGTTAACAGTGCAAGAAATCCAC
CACATGTTGGGCGTCAAACTTGGTCCCGCCATGAAAATCCATGACCTCAT
TTATTCTCTGCAACAGCTGGTCAACGAGGCGTATTTGGCCAATGAAGGAG
GAGGGTTTGATGACGAGGAAAGGTTCACTTTGCCAAAGACCGAACACAAA
AGTACCAAACATAAGAATcgcgatttcactttcacttCTGATAACTATCA
ACCCACTGAGACAGATTcaatagaaaatgaaaaagattcaCTCCATGAAA
TTAGTCACAGTGACGCAACAACGACAGAAGAAAACGAAAGTCTTTTCGAA
TCTCGTCCAAGTGAAAATGGAAATGATGAGGTCATCGAAAATGTATCTTC
AATACAACCCAATGATGTCGaaatatcaaagaaaatcgaTGAGCAAATCG
AAAAAATGGAAGTGAAAAGCACAAACAGTGTAAAGGACGAACATGAAAAT
GAGGTTGAAAAATCACCTTTGAAACAGGAAACAAAGATTTCCAATACAGA
CATAATAGACAATACCCCCGGAGAATCGAAACAATCGAACGCGAAAGTCT
CCTCATGGATGGATCAAAACAATGACGCATTAGAGAAAGTTCGGATGGAA
ACATGTGGAGNGATGTCGaaatatcaaagaaaatcgaTGAGCAAATCGAA
AAAATGGAAGTGAAAAGCACAGGCAGTGTAAAGGACGAACATGAAAATGA
GGTTGAAAAATCACCTTTGAAACaggaaacaaagatttcaaATACGGATA
TATTAGACAATACTTCTGGAGATcaagaatcaaaacaatcaaacgCGAAA
GTCTCCTCATGGATGGATCAAAATAATGACGCTCTAGAGAAAGTTCGGAT
GGAAACATGTggagattttgaaaaagaatattATGGACTCGTTAATCAAA
CATACGGCTCTAATACCAATCCGTACTTAGTACGTGGTCCACCCATTCAG
ACGCCCGGTCATAAACATCCAGTACGTTTCATTCAAATACGCCCATTGGC
GGGTAGTAATCCAAATATGATCTATCCGCCCATGGCAGGGGCCTATCCAA
GGTTTATACAACCACCGCCAACGTCAGCTGAAAGCCCTCAGCAAATGcca
tttattttaaaatttggttCTGTCAAAGACTTAGAAGGTGGAACACACCC
TTCAGCTACCAGTGAGAAAATTGATActaaatccaaaaaaacaaaaaatt
ctaaGAGCGAAGATCGAAAAGGTAGCGAACGGCGAAAgcgaaaaagtgac
gtcacagcAGCGCCTCGCTCACCCAAACATATTCGACCTGGTGCGTTGGC
AATCATACCAAAATATCCAGACAATTCGAAAGAGATTTACGATAAACATT
TAGGGAATGTTGAAATTGAATTGATCAACAAAAAGTTATGGGACGATTTC
TTTAATACTGGGACTGAAATGATCTTAACCAGAAACGGAAGACGTATGTT
TCCAGCATTAGGTGTCAAATTCACAggaatgctgacgtcatcaaaatacg
TCATCTTACTGGATTTCATCCCGGCTGATCAATTCCGATACAAGTTCGAA
TACAAACCGAACGCCCCGAAGTGGATGGTGGCATGCGAGGAAGGAACGCC
CAAACCAACGCAAGTTTACATCCATCCCTTCTCACCCCAGTTCGGCTTCG
AATGGTGTCGGACAGACGTCAGCTTCATCAAGTGCAAATTGACCAACAAT
TACCGTGAAAATTGCGGACATattttGATGCAGTCGATGCACAAATACCA
ACCACGTATCAACGTTTTGTATTGGGATGGTACTTTACCTTTTCAAATTA
CACCTCATGAAATGATGCGACTGTGTGTGAAAAAGTCTTTTATGTTCGAA
CAAACACAATTCATCGCTGTCACCGCTTACCAAAACAATGAGGTAACGAA
CCTCAAGATTCAGAGCAATCCTTTCGCTAGAGGCTTTCGTGGTGATTGGC
GCAAAACGAAAGCCAAACGAACCAATCAGAAGAAAGATACTTCAACGGGC
TTCAgttatgaagatgaaaatgaagaggaAGATTATGGTGGTTCGGACGA
CGAACAATCGCAAAGCATGGTGGGTGAACAATCGCAAAGCATGACGAATA
GCATGAGTTTTGATGACAAGGAGAATGATAACGATGACGCAATGCATTTC
AATGACACAACCATCGTTAAAGTCGAGCCGGAATATTAACACTCGTTTTT
TTGTTTGCTCAAAAACACTTACATACATACATAGAAATAAATCTTACTTT
GGCCCTGCGCAAGTTTCTTTCGCAAAGTCTTTCTAAGAAATTGGAAAGGT
CCAGCTTTGAACTGTTAAAcatattgtttttataagaacatccaaaattt
atgaagcctttggatgttcataacgttttgagttttaagcctaataaTGT
ATTTAACAAAACATGTGCTTATTTTcgctattttccttatgttcttatgt
atagtttgttcttataaaaaacgtgtttctCCCTAACCGGCTTCACCCTC
GGTCTTGAAAGGGTTACTATTTCTTTTAGCCTTTCAGGAAACTATGTTAT
AC
Run BLAST on NCBI

transcript from alignment at sc0000052:262427..272628+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005285 ID=TCONS_00005285|Name=TCONS_00005285|organism=Clytia hemisphaerica|type=transcript|length=10202bp|location=Sequence derived from alignment at sc0000052:262427..272628+ (Clytia hemisphaerica)
GAATTTCGTGTTTATTAAATTCTTACTTCTGAGGTAAGATCTCTTAAATT
CTTAACGCTCTCTGCACACGTTACTAATCTTATTTTTGTTGATTATAATG
GTTTATAGTGTAAACTCATCTTTATTATCCAGAAGGCAAggttttaaaat
atttgtaaaacaaTCCTCAAAGTGTTAAATTTCGCGCCAAAGAGAGGGTT
TTAATGAAAAGACTTATTttgtgtttctttttctttcagctCTCGAGCAG
AAGAATCGCATCTCAAGtttgaggtaatttttgttttttcgacTGAATGT
TATTGAATTTATCTTTGAAGGAAAAGCCCAGGAAAAGTCTTGATTCaagt
ttgtgtaaaaaatctcATGTTTAGTTTTCAAACATCTTTTATTTTATCAT
TATctgctaaatatttttctattcAGCTCATTGTTTAGTGAAGGGATCTT
AacattttttaacactttttgaaGAGACGGTACAAAGTAACATAACACTC
TTCATAAACACACTCAGCTTTCTGTTGGCACAAGTTTAAGACGAAATATT
TGTCGATAAGAAACCATAGACTATGATAGATTTAtagtccgaagggctag
agtgcTTTAAGTCATCGCAGGCaacaaaaagtgaatatcggaaaaaatat
tgttgcttttgttttcgaaaatctgcgaagcttctgattggtcacgcgct
gaaattctattgcaatgtcacgtgacctaggatTTCTTACCTAACCACCG
CACAATTTACAGCTAAggtacgccatctagcccttcgggctttataaatc
tatgaagAAACCTCCTTTATTGTGGACACggcttttcttttcttttagaa
GGACCTATTATCTCATACAGTAAACTACTTTTTTCTATCACTCTGACACT
GCaaagtcattaaaaaataacgaaagaGTTTGTCAAACCGTTTTCTTATT
GCTATCTATTGTTCTTTTCAAGTACTCACTTCACTTCCATAATTGTTGAT
AGCCTCATaatattttaatgactttctattgttctctgtcTTTTGAtgcc
aaaaattaattttcctcCCTTCAACAATTTAAAGTTGACAACATCAGTAA
AAAGAAGGAATTCCCATATGAATGCTAATGTTAAATCACACCTTTGTcgg
aatatattttttgttttatgttaaaatttatttttctcttttaccTACCG
GCCGAAAACCATTTATGAAAAGCATTCGAATCTTTCAGTCTTTTACTTGA
ttttaaaagactttaattTAGTTTTCTTGATATAAATTACTTTGGGATGC
TAAAATTTGAATTAGGATCATCTTCATTActcattacacgttttttttat
aagaacatccgaaagcctTCTaaatttttgggttttaagcctaaatatat
tcttaacattttctattttcaccattttatgaccatttttacccattttc
gtAAGGAATTTGGTGTTTtggagtctgcaaagccttagaatattcttagc
ttgttcttagcatttttgcCATTGAagcattttgttcttatatagtttgt
tcttataaaagaaaacgtgtaggATCATTTGTTTACATAAATCTTTGATT
AATTGACTTTCTTGAgtacagtacacgttttttatataagaacaaactat
ataagaacataaggcttcaatggccaaaatgttaagaacaacaATAACTA
CATTCTAAGACTTTATAGATTTTAAACGgcaaatttcttaagaaaatggt
caaaaatgctcacaaaatggtgaaaataagaacatgctaaaaacattttt
aggcttgaaactcaaaaagttaagaacatcctgaggcttcaaaaattttg
aatgttctttaaaaaaaatgtacatTAACTGCCTTAAATCCTTGTTATCA
TAAGAGTTATAAACCACATGTTTAAATATAAGAACAAAGACAATAAGAAT
CTTTGGAACCTGAAAAGTTTAAGAAcattacacgttgtttttttataaaa
gaacatccaaaatcttttaagctttctgatgttcttaattttttgggttt
taagcctaaaaatgttcttaacattttcttattttcaccattttgtgacc
ttttttacccattttcctaagaaatcgtgTGTTTTATCGTCCGCAAaacc
ttcaaatgttcttaatttgttcttatccTTTTTGTCAttgaagtcttatg
ttcttatgtttataatttgttcctataaaaaaaggaataggcgtagcgag
atactctgcaaaatttatggacgAGAGCGgcttttatgacactgtaatta
cacgcttttttttttataagaatggtgttttttcatttcatcatggatat
tcttaactttttggcgaaaatcatccaaaaatattcttacggtattctta
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttctta
ggttaagatcgaaattggcaatctacaggttaaaatgcattaaaaatggc
attcttaggttcagttgctaaattccatgatggtggtattcttaccatat
tcttaattttttggccattttcatcatggacattcttataaagtgtattc
ttataaaaaaaaaagcgtgtattatctttgttttatcaaaagataatgaa
tatgtcataaacgtctgcacttcctcataaattttgcagggtatctcgct
tccCCTATGAAAGGTTACTTGGATTCTTCTCTTGAAGATATTctcaaatt
agtttttttttaaatcacataANTTGGAGTGAAGAACTTCTCTTGAAGAT
ATTCTCAAATTATTCTCAAATCACATAGATTTTGGTAATTGTACTCtatt
ttggtttataattttgtatttttctgtTACAGACACACGGCCACGCGTAG
AAATCGTTTGGAGGATTTACGAAAAGGTAAAGTTACCACAGTCGAGACAC
GTGACCCCAAAAAAGACGTCGCGCCCAACCAAAAGGTTAAAGCGAACAAG
AACGTGTATAGAAAGGGACGTCGTGGAGTTTCACGCAAACAGGGTACGTA
CAATGAAGAGAGCTCTGAAGGCACGGTAGATACATCAATCGCATTCGTTT
GCATCAATCGGTTGGCGGAAGAATTCAATACCGAGAAAAGCATCAAAGAG
TTTTACAATTTAGATGCACAGAATCGGCTGCCGGCACAAATAGTTACCAT
TGACGACgatgatgataatgatgatgGATCTCCAAAGAAAAACGATGCAA
CCACGACATACAGTGAACAAGATCTCAACTATCTGAGCTTAGTACGTGTC
AAACCTAATAAACTTTCCAAAACTGAAAGTGAAATGTTTGATAAAAATCT
CAACGAGCATTCTGCAGAAGATGTAGAGGATGATTTGACGTCACAAGGGC
GGGGTAAAGGGCGTTCATTGAACAGTGTCATCTCTATGTTAACCGCCACG
CGTAACCAACCACGGCCCTCCCATCTACTTGAACAATATAAACAAAGTAA
aaacaagaataaacaaacaaCACAATCCAAAGAGAACATCAATGTCATTG
ATCTTTCCAACGATGACGCGCCATCTGCTGTTAAAACCAATATTGTGGAA
TCGGCACCTGATGGCTCCATCAACATTCCAGGAAAAGGTCAATACAAGAT
CATGGAACAAATTGTCACCAAACAAGGTGATCGCAACAAAATCATCTTGC
GACTCGGAAAACCGGTCAAAACAAACCAGCCAGTGGTGGAAAAGAGGAAC
AAATCGAAGACGACGGTCAATTCAAACGCCGTGTCACCTTCACGTGACAT
CACGTCACCACGTACCTCCGTCGATGATATGTACACGTTAGAAAACATGG
TACACACGCATCAAGGCTTGGATGAAATGCTCCGTAACCGATTCAAGAAA
GTACATACGTTTTGCGCTAAACTTCCACGCAACCCGCTGATGTGGACAAG
GAAACACGTCTCGACCTTCATCAATAATGCTAACTTCGCCAAATATGCTT
CCAACTTTTCCGAACAGGTTGGTGTTTTTTTCTATGTTAATGTGTCAAAG
AGAGATTAGAGAAGAGTGTCATTTCTCTGAAGACGAAGTAGACATGATTT
GCCAGTCAGACGTGAGGACAAAAGTAGACTAGATTCGCCTTCTGGGGGAA
CTTTGcatctgataatttttgatgggGCTGAGACTAGTGAAGCCCTCTTA
ATCATATTATCCAGCCTATCAAAAAGCCTAAGTTGACCTCAGGCTATGAC
AAATGGGGTTTTACATTCAAACTGAATAGCACATGTACTTTTCAATCTCT
CCGTTTTTACTCCATTCACCACCTTTTTAGTAACTCGTGATATTGAAAGA
GTTTTTGAGTATACTACTGCGTCAATAAACGTCATGGTGTCTAAGATTTC
AGTTCTGAGCACCCCTGAGAGTGAAATCTATATAAAACTCTCTTGTAGTA
GCTATTAGTGAGTGACTACATGTCTGTAGATATCCTAAGAGTCCATCGAA
GACGAAATTCAATCCAGAAGAAAGTTGTTAGGGTTAGCAGTTGCGTAGTG
CGAACAAGGGCTAGATGAACTTTGTCCGTACTCGTGATCAATTTAACCTC
GATAATGACTTATATCtctaataaatattttcatttccaTGTCACCACCA
GGAGATTGATGGACACGCTTTGATGTTGTTAACAGTGCAAGAAATCCACC
ACATGTTGGGCGTCAAACTTGGTCCCGCCATGAAAATCCATGACCTCATT
TATTCTCTGCAACAGCTGGTCAACGAGGCGTATTTGGCCAGTAAGAACCG
TATTCTCTCAAAATCCAATTGATTCTATTGGTTAATTGATAAAATCCAAC
TGATTTCATTGGTTATTTGTGAAAATCCAATCGAATTCACTGGATACTTG
TTGTTTTGGTCAtcataaagactttgttttctcctttgttaTATACTTTG
TTTAATACTTTGTTTATATAGGACCCATGTTTttatacacccctttctca
aaaacctgtaggatttttttcagccaggaGGGGTAAGAATAACGGATTTA
AACTCGATGTGGATTGATATTTATTATATTCTTTATGACCGGGGGATTTG
AATTCCTTAGTTTTCAAGTCAGACAATTTATTGAGGTGAACTGGGGTGGA
AAAAATCagacaatattttgcagtgacgatttgtttatttgaattttttt
tcagcggATAAAAGATTGGAGTATTGGAAGTCAATTCTTCCAGTTGGAag
ggggtcccagcgggtctatgAGAAAGGGGGGGGGTGTTTCTATCTATTAT
ATTTTAAGTCATAGGTTTTGTCTTGTCTTAAAAGATCATAGTTCTCTCCG
GGATGAAGACTATTCGTTgaattctttattttcttaaccAAATCTAATCA
AGCTTTGaagattttcaaatcaaaattttgagaagaATAAAAAGACGGCT
CAAAATATTTATTGAGTTTTGGTTTTTTGGCAAAGTGAAACCTTTCCATT
TTTTCGTCATCGTTAAAAATAAGatctttattattttcaatgttttttta
tgtgttttttAGATGAAGGAGGAGGGTTTGATGACGAGGAAAGGTTCACT
TTGCCAAAGACCGAACACAAAAGTACCAAACATAAGAATcgcgatttcac
tttcacttCTGATAACTATCAACCCACTGAGACAGGTACAAATCTTCTGT
ATTGACTTTTTTTACCACTATGTTATTCTGacttgtaaagtttttttatt
gacttgattAAAGATTATTGACTgaaaatagaatcttttgtgtctttaaa
ggttttattttcacacaagtgttcccgtttcatatcagacacatttcata
ttaggacagtgtctgcctatttttatattgtgctgatataagcaaaaatg
tttttcttttccactttctgaccaatcttgctccacatccgtgtcaatcc
aatgtgaaaaagcttgtaaattaaaattgatgaataagcaaacgatatca
ctcttatttaaagacaaaacctttaagttttaatttttcgagCAAGTAAT
GCTACATTTTACATTCTAAGTCATTTTATACATTAATACTGGTATCCGGA
CAACCCCCCTGGTTCAGAAAATTCTCCTCCGGAAACCTCTTTCGTGAATT
CATACTTATAATTTTGCTTCGAAATCTGTTTACAGAGATTTCTTTACTGT
ATGAATACACCTCTCTTTCTTTAGATTcaatagaaaatgaaaaagattca
CTCCATGAAATTAGTCACAGTGACGCAACAACGACAGAAGAAAACGAAAG
TCTTTTCGAATCTCGTCCAAGTGAAAATGGAAATGATGAGGTCATCGAAA
ATGTATCTTCAATACAACCCAATGATGTCGaaatatcaaagaaaatcgaT
GAGCAAATCGAAAAAATGGAAGTGAAAAGCACAAACAGTGTAAAGGACGA
ACATGAAAATGAGGTTGAAAAATCACCTTTGAAACAGGAAACAAAGATTT
CCAATACAGACATAATAGACAATACCCCCGGAGAATCGAAACAATCGAAC
GCGAAAGTCTCCTCATGGATGGATCAAAACAATGACGCATTAGAGAAAGT
TCGGATGGAAACATGTGGAGNGATGTCGaaatatcaaagaaaatcgaTGA
GCAAATCGAAAAAATGGAAGTGAAAAGCACAGGCAGTGTAAAGGACGAAC
ATGAAAATGAGGTTGAAAAATCACCTTTGAAACaggaaacaaagatttca
aATACGGATATATTAGACAATACTTCTGGAGATcaagaatcaaaacaatc
aaacgCGAAAGTCTCCTCATGGATGGATCAAAATAATGACGCTCTAGAGA
AAGTTCGGATGGAAACATGTggagattttgaaaaagaatattATGGACTC
GTTAATCAAACATACGGCTCTAATACCAATCCGTACTTAGTACGTGGTCC
ACCCATTCAGACGCCCGGTCATAAACATCCAGTACGTTTCATTCAAATAC
GCCCATTGGCGGGTAGTAATCCAAATATGATCTATCCGCCCATGGCAGGG
GCCTATCCAAGGTTTATACAACCACCGCCAACGTCAGCTGAAAGCCCTCA
GCAAATGccatttattttaaaatttggttCTGTCAAAGACTTAGAAGGTG
GAACACACCCTTCAGCTACCAGTGAGAAAATTGATActaaatccaaaaaa
acaaaaaattctaaGAGCGAAGATCGAAAAGGTAGCGAACGGCGAAAgcg
aaaaagtgacgtcacagcAGCGCCTCGCTCACCCAAACATATTCGACCTG
GTGCGTTGGCAATCATACCAAAATATCCAGACAATTCGAAAGAGATTTAC
GATAAACATTTAGGGAATGTTGAAATTGAATTGATCAACAAAAAGTTATG
GGACGATTTCTTTAATACTGGGACTGAAATGATCTTAACCAGAAACGGAA
GGTATGAATGATTGACTTTTTGTGATCCTGCCAACTGACCATCTTTCAAA
ACACGtccgtttcttttataagaacatccaacccTTTACCATTtgacttt
taagcctaaaaatgttcttgaaatgttcttgaTTTTACCGTTtagtgcaa
tttcctaagaatcGGGTGTTTGTCTGTAAagttttgaaatgttcttagcc
tgttcttaatattttagtcatcgaagccttatgctcttttTAATTTATTC
TTACAAGAAAAGCAGAATTAAAGATCTGAGTGACAGAGATTCGAATTTGA
GAAGGAATTAAGATCTGATAAGCTGAGATACAGGGGTGAAACACTCAATA
GCagtattgaaaatttaaaatctgaaagaaaaatgCAAGAATGTGAATTT
TAAGTTGTTGAAAGACTTCGCTATACCATTTAacagttacacgtttttta
taagaacaaatcatataaaaacacaaggcttcgatggccaaaataataag
aaaaagttaagagctTTACGGACTAAGAAAGtgcacaaaatggtgaaaat
aagaatatttttaggcttaacacACAATAAGTTAAAAAACATCTAAAGGC
TActtaaattttggatgttcttttattATAAACATCATGCGAACGCTgct
aaagaaaatcaatataaatTAAACAAGATCAATCAAATAAATATTAATTG
CAATGGCCACTCACTCAATCACTACACAAGGTGTATTTTGTCGTCACGGT
CAATCAGTAGACTCTCCAAAACTCGAAACTTTTTGGGGAAGAGAAAGGTT
TTGTTACAGTTTGTTCAAGAAACGTTTGAGTCTTCCAGACTTCATTGTAT
CGTTAAACGTGTATCTTTCCTTTTTATTACTTCAGACGTATGTTTCCAGC
ATTAGGTGTCAAATTCACAggaatgctgacgtcatcaaaatacgTCATCT
TACTGGATTTCATCCCGGCTGATCAATTCCGATACAAGTTCGAATACAAA
CCGAACGCCCCGAAGTGGATGGTGGCATGCGAGGAAGGAACGCCCAAACC
AACGCAAGTTTACATCCATCCCTTCTCACCCCAGTTCGGCTTCGAATGGT
GTCGGACAGACGTCAGCTTCATCAAGTGCAAATTGACCAACAATTACCGT
GAAAATTGCGGACATGTAAGATCAACCTTTTCATTTCTTAGGTTATAACT
TTTGCATGCACTCAATTTGCCATGTATATTTGATTTAACGGATAGTAAAC
TTTGTGAAAATGTTGTGGACATTTTTCTAAATGATCTGCTTTCAAAATAA
CTGTTAAATGGTATAGCGAAGTCTATCAATTACTTAAAATTcacatttca
tttttctttcagattttGATGCAGTCGATGCACAAATACCAACCACGTAT
CAACGTTTTGTATTGGGATGGTACTTTACCTTTTCAAATTACACCTCATG
AAATGATGCGACTGTGTGTGAAAAAGTCTTTTATGTTCGAACAAACACAA
TTCATCGCTGTCACCGCTTACCAAAACAATGAGGTACACAACATTCATAT
CTTGTTTACTTCCTCATCTGGAGTCAGCTTGCTCATCCTATTTTAACATT
TTGCCATTACTTTGAATTTCAttgatcagcatttactagttgtttgaaca
attttcaattgtttcatgagaccttttcataaattacgttagaAGAAACG
CTCACCTCGTTTTCGAAATATTGCTATGGTTAATTGATTTTCAGAGGAGT
TCATGATAAGTTTACTCTATTTGAAAATTAACAAATGAAGACTCGAGGGA
TATAATCACCTGGATTCAAAACGAGGAAGTCGTTCTACTCACAATAATTT
GTGAGCAGGGACAATGAAATCTTTTGTCCGTCTTTTTCAGTCCAGTTTCA
TTCTATATTCAACTATTTCTTCAGGTAACGAACCTCAAGATTCAGAGCAA
TCCTTTCGCTAGAGGCTTTCGTGGTGATTGGCGCAAAACGAAAGCCAAAC
GAACCAATCAGAAGAAAGATACTTCAACGGGCTTCAgttatgaagatgaa
aatgaagaggaAGATTATGGTGGTTCGGACGACGAACAATCGCAAAGCAT
GGTGGGTGAACAATCGCAAAGCATGACGAATAGCATGAGTTTTGATGACA
AGGAGAATGATAACGATGACGCAATGCATTTCAATGACACAACCATCGTT
AAAGTCGAGCCGGAATATTAACACTCGTTTTTTTGTTTGCTCAAAAACAC
TTACATACATACATAGAAATAAATCTTACTTTGGCCCTGCGCAAGTTTCT
TTCGCAAAGTCTTTCTAAGAAATTGGAAAGGTCCAGCTTTGAACTGTTAA
Acatattgtttttataagaacatccaaaatttatgaagcctttggatgtt
cataacgttttgagttttaagcctaataaTGTATTTAACAAAACATGTGC
TTATTTTcgctattttgtgagtattttcgctattttgtgagtattttcgc
caattttcttaagaaatcgggtgtttagAGTCTGCAACgctttaaaaatg
ttctcaacttgatCTTAgtttttggccatcaaagccttatgttcttatgt
atagtttgttcttataaaaaacgtgtttctCCCTAACCGGCTTCACCCTC
GGTCTTGAAAGGGTTACTATTTCTTTTAGCCTTTCAGGAAACTATGTTAT
AC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003011XLOC_003011Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005285-exon-sc0000052-1491911889:262427..262459TCONS_00005285-exon-sc0000052-1491911889:262427..262459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:262427..262459TCONS_00005285-exon-sc0000052-1510915933:262427..262459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:262427..262459TCONS_00005285-exon-sc0000052-1575043694:262427..262459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:262666..262699TCONS_00005285-exon-sc0000052-1491911889:262666..262699Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:262666..262699TCONS_00005285-exon-sc0000052-1510915933:262666..262699Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:262666..262699TCONS_00005285-exon-sc0000052-1575043694:262666..262699Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:265359..266493TCONS_00005285-exon-sc0000052-1491911889:265359..266493Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:265359..266493TCONS_00005285-exon-sc0000052-1510915933:265359..266493Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:265359..266493TCONS_00005285-exon-sc0000052-1575043694:265359..266493Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:267128..267266TCONS_00005285-exon-sc0000052-1491911889:267128..267266Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:267128..267266TCONS_00005285-exon-sc0000052-1510915933:267128..267266Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:267128..267266TCONS_00005285-exon-sc0000052-1575043694:267128..267266Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:268039..268161TCONS_00005285-exon-sc0000052-1491911889:268039..268161Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:268039..268161TCONS_00005285-exon-sc0000052-1510915933:268039..268161Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:268039..268161TCONS_00005285-exon-sc0000052-1575043694:268039..268161Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:268701..269927TCONS_00005285-exon-sc0000052-1491911889:268701..269927Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:268701..269927TCONS_00005285-exon-sc0000052-1510915933:268701..269927Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:268701..269927TCONS_00005285-exon-sc0000052-1575043694:268701..269927Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:270812..271091TCONS_00005285-exon-sc0000052-1491911889:270812..271091Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:270812..271091TCONS_00005285-exon-sc0000052-1510915933:270812..271091Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:270812..271091TCONS_00005285-exon-sc0000052-1575043694:270812..271091Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:271289..271459TCONS_00005285-exon-sc0000052-1491911889:271289..271459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:271289..271459TCONS_00005285-exon-sc0000052-1510915933:271289..271459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:271289..271459TCONS_00005285-exon-sc0000052-1575043694:271289..271459Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:271851..272392TCONS_00005285-exon-sc0000052-1491911889:271851..272392Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:271851..272392TCONS_00005285-exon-sc0000052-1510915933:271851..272392Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:271851..272392TCONS_00005285-exon-sc0000052-1575043694:271851..272392Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1491911889:272511..272628TCONS_00005285-exon-sc0000052-1491911889:272511..272628Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1510915933:272511..272628TCONS_00005285-exon-sc0000052-1510915933:272511..272628Clytia hemisphaericaexon
TCONS_00005285-exon-sc0000052-1575043694:272511..272628TCONS_00005285-exon-sc0000052-1575043694:272511..272628Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:262427..272628 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.164488	0.20197	0.309925	2.91781e-05	95.6128	73.1219	31.6096	31.729	1.50387	5.22721	0.76314	1.33256	0.392477	1.90949	0.886669	1.37074	1.88756	2.1131	1.15221	0.953692	0.316106	0.541508	1.3194	1.22553	3.44356	5.30444	0	0.0938792	0.653578	0.0304575
Blast
[Close]
BLAST of TCONS_00005285 vs. Swiss-Prot (Human)
Match: TBX10 (T-box transcription factor TBX10 OS=Homo sapiens GN=TBX10 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.263e-49
Identity = 92/197 (46.70%), Postives = 126/197 (63.96%), Query Frame = 2 
Query: 2600 LGNVEIELINKKLWDDFFNTGTEMILTRNGRRMFPALGVKFTGMLTSSKYVILLDFIPADQFRYKFEYKPNAPKWMVACEEGTPKPTQVYIHPFSPQFGFEWCRTDVSFIKCKLTNNYRENCGHILMQSMHKYQPRINVLYWDGTLPFQITPHEMMRLCVKKSFMFEQTQFIAVTAYQNNEVTNLKIQSNPFARGFR 3190
            +  V ++L  K LW++F   GTEMI+T+ GRRMFP   VK  GM + + Y +L+DFIP D  RY++ +  +A  W+VA +     P +V+ HP SP  G +W R  VSF K KLTNN  ++ GHI++ SMH+YQPR +V++ D     +    E       KSF+F +TQF AVTAYQN+ +T LKI SNPFA+GFR
Sbjct:   62 VSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALLMDFIPLDDKRYRYAFHSSA--WLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVFVDPRKDSERYAQENF-----KSFIFTETQFTAVTAYQNHRITQLKIASNPFAKGFR 251
The following BLAST results are available for this feature:
BLAST of TCONS_00005285 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBX101.263e-4946.70T-box transcription factor TBX10 OS=Homo sapiens G... [more]
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