TCONS_00005270 (transcript) - C. hemisphaerica

Overview
NameTCONS_00005270
Unique NameTCONS_00005270
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1756

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00005270 ID=TCONS_00005270|Name=TCONS_00005270|organism=Clytia hemisphaerica|type=transcript|length=1756bp
TAATGGGGATAGAACGACAAGTAACAACGACCAAACAAAAGAGAACCATC
AATCACTGGTCAAACCTTTCTTCAGCCACGATGAACTCATCTTCGCATTG
CTTTGTGCTTTCGGATTGGCTTTCATCATTGTGTCCATCTGTTTGACTTT
ACTTTGCATCAGACGCATTCGTCGCCAAAAATCGCAACCAACAAAGTGAT
GCCTGAGCTcaactaaaacaaaaacacaTAGATTGACATGTCAGCAGATT
ATGACCAAACCCAACCACAACAATacgaagaagaaggagaaggacATAGA
TACAACACAAGCAACGGAAACGTCATCAATCACCAAGGTTACCAAGAAGA
AGAAGCGCAAACGAAAACCCAACTTATTGAAACATCTGGACATAGCAATG
AAACTAATGATCGAAGAAATGACAATCGAAACAAAGTGAAAATCAATTCC
ACTAAAATCTCTATCGGTAGCAGTAAAAATAAACCCAAACAACAATCCAT
TGACGAAGATTCAGGTATTGATTCAGATTCCAAGAAGAGTAGACGAAGAG
ACAAGGATGCTTCTTCTGATATCTTGAATACCATTGATTGGAAGATGGAT
AGTGGTGAACAATATAATGGATCCAGTGAAATACCAGAGATGGCAGATTT
GAAGATTCGAGATAAACATGATATTCGTAGAGAAGATGATAACGAGGAAG
ATGTTTTCGAATCGACTCCTCCCAAGAATACTGAAAAACCAAAACGTGTC
CAAGTGAGAGGGAAATCTCTTGAAGAAGAACGAGCTATTGAAGAAATGAA
GAACGAAAAgaataaaacaaacctttcgcccATTACAAGATCAAATGGGT
CGGTCACTGATCAGGATTTGAAAGActctttagattttttaagtAAAACA
CCTGATGTAGATTCCTTGGATTCGGATTTAATGAACAGTTTAATGGACAG
TTATTTGGAGAAAGATTACGTTAACAGATCTCCTACTCTTAAAAAACCTG
TTCGACCTCCTAGCACTTCCAGTCGAAAAAGCAGTAGCTCGGATAGTGTT
TCCAAAATGGCAGATTTGGAAAAGAACTTAAAAACAATTCgagaaaagaa
taaaaaacaacCACCTCCCCCTGTTCGTAACAAACCGCCCTCAGTTTCAA
AAGCATGGGAGGATCCACGTGAACAACAACGTTTGAAAGTTAAAGAGAAA
CAATGGCCACCCAAAGAACCGCCCAAAGACGTGGGCGCTTACGTGGTGGA
GAGTTACGGGCGTACGGATCCATATACAAAGAAATTGATACAAGACGTAC
AACGAACGAAACGTGAAGAGGAGGAACGCAAAGAAGCAGAGAAGCGAGCG
GAGATTGTGAGTGAAAACACGGCACCTGTCAGCGCATTACGTGAtacatt
ttcaaacaaaccCAGGAAAGGGGCACTTGGTACTCTTCGACCTCACACCG
AACTCCATGCAGAGAAATCATGGATTCGTCATGAGAAGAAGCCAATCGTT
TACGATGAAGCACCAGAAGAACCTGATTGGATGACATTGATTCGTAATCG
CCGATGGAAATCCACTGTCAAAGCTCGCTTCCCTTGCCAAACGTCTGATC
GCACGGAATTCGAAAGACGGTCAACTACACCAAAGAATTGGAAGAAACTT
GCTAAAGATAAGAACGCATTGAAAATGCTCTCAGAAATTGTTGGTATTGG
AGCTGAAGGCGAAGAACTATTCTTGAGACTAGCCAATCAACGTCAAAAGA
TTGNGG
Run BLAST on NCBI

transcript from alignment at sc0000052:171752..187792+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00005270 ID=TCONS_00005270|Name=TCONS_00005270|organism=Clytia hemisphaerica|type=transcript|length=16041bp|location=Sequence derived from alignment at sc0000052:171752..187792+ (Clytia hemisphaerica)
TAATGGGGATAGAACGACAAGTAACAACGACCAAACAAAAGAGAACCATC AATCACTGGTCAAACCTTTCTTCAGCCACGATGAACTCATCTTCGCATTG CTTTGTGCTTTCGGATTGGCTTTCATCATTGTGTCCATCTGTTTGACTTT ACTTTGCATCAGACGCATTCGTCGCCAAAAGTGGGTACTATCAGAAAAAG CCATtccaaaatatctgttcttatttgccagctggaagaaTTCTTCAACT TTTAGAACGTATCCCCCAATTTCCAGGTCATTCTATATTCANttggaaga atttttcaacttttagaaCATTTCCCTTAATTTCCAGGTCGTTCTATATT CATAAAAGATTATCCTTgcaagatttcaaatttttgtaaattatcTGTCT GGTTTCAACTGTCAGAAAAAAATGCCTTTTTTCCAACTGGAAAAAAAATC GGTGTAATTAGATAGGCAGTTTCTGCTGGAAgccttcagaacagatcaga aagcagaaAGCTTTAGATCAGATCAAGTTTTTCCAGCTCGGGGAAATCAA AAGGCTTATTTTTATTCCAAAATTGGCCTAACTTTTTACTTAGAACAATT CAACATTTTTCAGGGGGTTAGCCCCCAGAGTTATGGTTTACAAGCAGTTG CGGTttgtatcaaaattgaaaactatCTTTTGGGAAAACATATTACATGT GTAAATGtcatttaaaataaaaacaagaagcccgttgggcgtgaaggccc agcaaaagcgaaattttcgcgcgcgattttcgcgaattttggaatttcta aaaattccaaaaaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNttttagtgtccattaacaaattccagaatcagt ttacttgaaataattctgtgtcgagtacgttgtcgagtttgaaaatcatg ccaCGTCCCACTGTCACTGTGTCTTATTTAAATTTACAcgtttcagttta tttatttctatattagaagccattatttcctaaaaataaagtctttttga aaacaagaaacttaaaatggcagtgatttaaggtagaatttttaccctta aagctttatgaaaacttgagcaaaaactataagatatgacagaatgttga aaaaggtttacaaagaaaaatcactaaaaggtttctttggtttgaaagtc tctaaagcaaagaaaatgttcaagacaGTATGAATCAACACGAATCAAtt tcctcgcttcgaccgccatcttgttttatttgaaaacatttgttgtttaa ggagcgcgaaatctgaaaatatatctttttttaggcagtacccgacttta gcaagcttttccctgtctagacggcaaaaagtgtggtactggtattaagc gccgtttctaccaaaacggacagacacACGGAAGGAAGGACGGAAGGACG GACAGAGTTGCAAATGAAAagccctatcgctagcgctgggccaactATAC CCGCAATGCTGTTGATTTATATTTACTTACTCCAACCTTTTCTACGTCAC TTCTCTCACCATCAGATTTGCCAGACGTTCAAAAACAGGTGAAGGGAACG AGGCTTTTGTAGCTGAAGAAGCCATCGATGTTGTGATCGCCAGAGAAGAA GCCATCGATGTTGTTGTCGCCAGAGAAGAAGCAATCCAAATATCTCAACC ATCAcctgaagaaaagaagaagaagaaaaaagtataccattttgaatttt cttgatTATTTCTAAGTCTCAAGGTTGTCAAGTCCAAAAGCTTGTAATGC TACACTTCATTATTAGAAAAAAGCTCtttagattttttgacgtcatttga aATTTGCTACAAGAaaaacatccccttctcacagacccactgggaaccgc cactgtgaaaattttcctccaatttttgtccccactgaaataaacaaata aaccaatcctaaATGCAAAACAGTATGCTATTTTtcctatccccactgaa ttttttgacttgaaaaaaggaaagaattGAGATCCCCAGGCATACAAAAT ATTGGAATACCAATCcctatcgagtttcagtccgttatttttatcttcAC AGTTCAAAGTTGAACAAAATAATGATGCGACCCCCCTAAAACCTGCCTCT ATAGTTTGGAGTGCTCGAATCAACTGTAACAGTGTGTAATATGGAGCAGA GAAAGTCTTTGAGAACCAAACAACAACCCTCACAAAACTGAACACGTCTT CCTTCGTCCGTTATAGATTCTTCGTCGCAAGAAGACCAAAGAGAAACCCG CCCTGCATGAATCACCTTCACCAACAAGAACAAAGGAAACTCCCTCCAAT GAAACACCCCCGCCCACCACTTCTTCATCACGCCTTCATTTCTCACCCAT GGTTTCGACTGACAGCAACCGCCTTTCCTACTCACAACCAAGCCTCATCA ATGCCACGGAAAGTGATGGTGCTTCTCCAACGAAGTCGAATGAAGGTCTT GGTTATGGTACGTTTATTGTCTTTCTCCTCAAAATTAGTTTGTGTTTCAT CTTTTTTCTGACTAGGATATTCCCATATATTCCCATGAAAGGCAAAATTC GTTCGACAAGCTTCAAATCAGAGGCATATTTCTTTATCCACTAAatcctt ttaattttttatggCTTCTATCATTATACAGTGATTGAAGTTATCTTCAG TTTTGAATCAAGCCCTTCTTATATCTGTGGTTCAAATCTTTTGTGAATCT GGCAGGCTCAGTGTTTCGTTATTTTAGCCCTCAGACAATCCTTGGTatct ctttctcttttgtttCGTTTCACTGCTTTTCACATCGGCTATACCCCTGC CGATATAACACTAGCTTTTAGATGGGGGGACTCGATTTAGTATAATATAC CAGTTTTGGTTATTTTACAAATCAGTCTCACATTTTTCACCACAGGGGAA ACAAGAAACAGGACACATTCAGGAGACATTACAGTGACAGATGACGTTTT GAACCATTACGGTTCCACCACACCACGTGGTTTCAAAGAAAGTCTTCTAC ATCAATTCACCAACGATCAACACAACGTCTTCCACAATAACGACAACGAT TGCGATGACGAGCATGATTATGCTCAAGTTCACGATCGTTTGTCCCATCG TGATCATGGTAGTGAAAGTCACGTGAGCCCGCATGGGAAATCAAACCATG AAAGTCCCCACAGCGTTCACTCACGTCAACGTCAACCACATACAAAAGAC AAAGAAGAGGAAGAGCATTTTCAAGACATTGATGAACATTCAGGTTTTGA TCAACAACATCTTTACGCAACGGTCATCCGAAAGAAACCAGATTCAGGGC GAAAGACATTATCTGAGCTAAGACATCTTTATTCAAGTGCATCTGATAAT AAAACATCTTCTGGTAGTCAAGATAAGaataatgaagatgaagatgaaat taCTATCGATTTAGATGCTAACACTACGGAAGAGAACTCTATTAATCATC GGCAAGCTAATGAGACCACTATAACCTTAGACGATAACAACAGTGTGAAT CAAGGTTCTTATTACGGTGATGTCAGCTCCACTAATGAAGACAAAGACAA TGAGCAAGCGCAACTTTACAGTCGTTCTTCTTTAAAGAAAGCTAACAGCC GCGCTGCATTATGGGAGCGTGGCCATGTTCAAAGTCCTATTCAGAGGTTG AGAGACTCGAAAGGTGAAAGTCCCACCAGAAATAAGTCTGTTAAACAAAT GTGGCAAGAAAGAGACAGTATAAACTCACAAGACAGTAAATTTTCTTCAC CTTTTCGCAAAAAGAAGAATACAGTTTCATCGAGATACAATCGCAACAAA AATGTCCCTGCTTCACCTAAGATGTCCATTAGAGATATTTGGCAGAAACG AGTTGAGGAGAACAGCAATGCTTCACCAACACATTCGATCAATCGAAACA GTAGTAACGCATCAAGGCAATCTGTACCAGCCTCTGTAACCAGCATGTCT GTAGAAGACTTTGTGAACGAAGATGGAGACCAGGCTAATGTGGACATGTC GGAGAGTATAGAGGCTATGTTTGATATGGGGGAAGACGGGGAAACTGGGG TTGAGGAAACGGAGGAAGAATCATTTGCTGACATTTTAAGAAAACAAATG ATGTTTTGAAGAGAGAGAAAAAACAGGTAATTTCATTCAATACTGTCTTC ATCCGGACAATTCGCCTCCTGGACTGTGCCCCCGAATAATTGCCCATGAC AATTATCGCCTTGAACAATCACTTCCTGAGAGAATTGCCTCCCCAGATTA CACCCTAGGATAATTGCTTCTCCTAATTGTCCTGGGGGTTATTGTCCTGT CACGCCTCGATAGTGGCACAATTTTAGAAAATCTGACCAATTTTTTCGCT TTAACTTGGTCAAATACTTTGAGGAAACAAATCGTAAGGGTCAATTTTGC GCCAAATTTacattttgctaaattttgtcCTATTTCCACATAGGttgttt tcagatcgagtgcctcCTCGAGTAAtctaattttgaaaagaaaattatat atttatgatttattgtaAAATTTCCATTGTGATAATTGTTAATATAAATC TGTAAATTTGATTTGTAaatataaacttaaaatttaaagtttaaatattt tgagattaaTTAAAAAAGATATAATTTAATCattaaattatcaaaataaa agagcTAATAATTGTAAACTCTCAGATCAACATAATAACATCAAGTACTG AATGCTTTCAGTGCCGTagcaaataattttttcaaaaatggttattttgc aaaatgcaaagtttttcttttgtaatttgtcataattgtcttttatgtgc atgttttgagtgcattttcgagcaatctagagctcaaattttcaaaattt cctcccTCGGGCAAAACCCGTTGGCCCtcgtgtcactaaacttcagccat CCCTCCcgaatatgaaaatgcttcctacggcactggcTTTTAAGACCTTC AAAGTCCCGCTAACGGtcgtaaaaatcaaaaaaaagctttttcagTTCCA TAAAGGGTTatagaattgtttttttttttcatttttcaaaaaaatagatt tttgggCCCTGGGGATGAGTTTTTTGCCAAGACGATCTTTTGTGCCTCCA ATAATGAGTTTTAAAGAtagtttgttttgctacaaTCGGGCCTTTGAATA ATCTGaagctactgaagttgagcctgggattgagcccagtgcgttgcgca tgTTCGACTATTTTAGTACCAATGTACTAAAAATTTTTAGGGACATTTTG ACACAGAGACCACCCAATTTTGGTATTTTCAGGACAAATTGTGTCTTCTC GGGACCATTTTTCTCAAGAGTGCTGATATTTGCAACAGAATATTAATTTT TCTCATTATGCTTTATGAATTGAGGAAACATTAAGGACATTTGACTGGAT TTTctctaaatgagaaaattttaaatttctttgaaatattttggctaaat tttggcaaaaagtcAAGGTAACGGTTccaaaattcctaaaaattttgCTT CTTTCCTCGATTTTGACCGAAAAATTCCTGAGTTTTGAAAATTGGGCACC ACGCAACCTGCCATCCGCTAAACTTACTATACGGTAAGGTTGGAATCTAT TGGTTCGAGCTTTTACTTCCAAAACTATAAAgtataaatttgaaattatt tcatAGATGTTTGTTGTACATTTGTAGACTTTTGTAATTTTATATGAGAG TCTTGGAATCATTTACTCCAATGTCAAGCATCTAGGGGTAGCATCCAAAA CTTTATGAATTccctttaaaattttaataaaaagagaaagtagagagaga gagagagagagtggtTTAGAAAAGAGAAGTTCTCAGTTTCTTTTAGTAAG TAGTTCGTTGATAGGGTATAATGGAAGGCTTAGCGTTTTAATTTCGTTTT AATCATGGAGAATTTATGTTGATAAAGCAATACCCTTTCATTGTTGTGAT AATTCAATTCAAAGCGCTGTCATCTTTTGTTTTATCAGCCTTCTCTCTTA TACTCTCCAATGAAAGAAGCTTTCTTTCTGTTGTCATTTTGCTTTTGAGA GAAACCTTATTCGTTAGTTCGGCTATTTATACCTCAGTTTTCACCAGCTT TTTATAAGCACTCCACTTAGTGTAGATCGGGCATTATGGTGggtcatttt gttttgttttgaacgATACATCCTTTGTTTTGACGAAATGAATCAATGTT TGTGCCTTAAAAGAATGTTCTTATAGGTAAGATAGTTTGTAGAACttaaa caaaaagaacaaaagggCAGAATAGAAGTAGTGAAGCACAGCTGTTGTCT TTTTTGCTCGCTCGCTGACATTCTGTGattgacaaaaacaaaacaaaaaa ttcttttaagcACTCGCTCACTTTGAAGGCAATGAAATAGCCTGTCCAGC TTTTGGTATTAGCGCTGAGTGAGTTGGTGGACAGAGCGCATTTTTTGTCA TCTACCAAAAAAAATCTGTTTGGTTCGTGGCGTTGTTGGAGGGTGGTTGA TTTTCTCCAGCGCTTACGGTAAGTCCAGCTCATTCTCTTGACAACACCAC ATCCAGTCGCTCAATGATGGTGCAATATAACAACACCTGCTGGACGTTCC AGGCAACAGGTGTCATCTGATATGCTCCAACTTTTTTCCATGTTTTACTG ACACCTTGGGAGGTGGTTTAAGATGATGACATACTTATTATGACAAAGTA TTTTTGtggaatttattttggaaaattttgttaTCTCTATACGAGAACTc gtgattttttgtgatttgttCTTGGTTTAGCTATGATGTTTCAttatttg agttttttgaatatttcctcGAATGGATAGCAGACCTTGTTTGACATTAC CAGCTAGTCTTTAGTTATTGTAATTGAATGGAGTTTTCTTACAAATGAGA AATAtacttttgaaacttttattttgattcattttcaaaaaattttaagt cTTGGTTTACTTTGGGTAGCAAACAGATACTGTTCCAAAACATAGATTgt atgatttttcaaaatcattgcATTTGAAGTAAAAACAACAGCTGTGTGAT TTCACTTTTAGTTTTGCATTACTTTGTAAAGATAATTGCATCTTGTTGAT TAGCTATTATTGACGTCTCCTCATCAActctcaaaactttttttcagatg GTCATTATTTTTGATGTAATCAGTGTTTGCAGTGAAATCATACTTAATTA CATCTAATTATCGATAAAAAATACACCGAAACTTAATGCAGTGAGAAGGC TGAGAATACTGCTGGTatgatcaaatttgaaatcgaattttgataatttc aaagtcctcataaaatttgaattgatgCTCTCTATTTattcatcgaataa gagagcgtatCGTAGAGTAGAGcgttgtttatgagagtttctcgttgacg gtgactttcaatattatcgaataagggagcctataaGGAGAACATCGACT TAGAAATATTCCTCCTTGTAAATATCCAAATGTTAAAATCTTAAGGTTAT TCTAATTTTAGTTTCCTCAAAGCTTGCAATTAACCGTGTACAATTGATAC TCTCCAACTCGATGTTCTCctattcttgaaaaatttaccgtgaatatttt taaaaggaGTGATATTACTTTTTTGTGGAAATGTTATGATGTCTTCTGAT GAGAAAAGCAATGCACCACAAACAGTGCTATCTTTGTGAAGAAGGCATCA TTAACAGTGCTATCTTTGTAAGGAAGGTATTCCCTCAGTAAAACAACACG ATAGACTAAAGAGTTATTGCTTTCTGGACAACAGCTTGAGCCTGTCTTTC CTTTGGCTGAATTCTTTATAATACACAGTCTATCACTGTGCAAAGCCAGG CTAGAGAGATTTTTATATTACTTTTTTTGATAATAtgaatattttgatga tttgCTTTTTATTCCGGCTTTTGGAAGGTTTTAAGATTCCCAGTTGCTAG TGGCAACCCATAATGAAAAGGtgctttaaaaaacaaaaccgaTTAATTAT TTGAGAAGATATGTTAGAAAAGATTTCATTTCGGCAACTTGACATGAGCT GGTTTTTTCTTAAAGTGACGTCGTTGTCATGACGATAGAAAGACGGCTGA CATTAATCGTGTTTGCGTGATGTTGCTTTTTTGATGTCATTATTAGCACG TACAAACTAATTTCATTAGCTTTacgatgaaattttcaatttaaaaattt ttcgtcAATTTAAGCGACGACTAAAATTATGCGactgaaaatttctttga aattccaaatttttataaaaaataccgACTATTCCATTCCAATTCCGAAA TTAAGACTTTTGCTAAATCCCGTTTCTCCGGACTTAAAATATCCAATTTT TCGTCTCCGTTAGTGTGCCTGATTCTCCaaattttgtccaaatttttgtt gtttgtatCTACCCTTTTGAGAAAGGTGGAGTAACTGAAGCGATGTGAAG CAACCCATAGTTCTATCCGAAGCAtagaggacggtaaaagtgctgattta ccgtcgtcttcAGTCAATCACGATCTAGAAAGAATCCGTCGAAGAGAGAG AGACACTAATAAATAAACTTGGTACTTCTTTTCATTGTGCACTTAACATT TCATCATATTTAGAAAATGTTCTGCTGCTTAGATTGCATACTACCTATCA ACgattttcaacaaagaattgTAATGAAATGTTATGGATTTACGATTAAT GTAAAGATTAATATAGACAAAATATCAGAAAGAGATTTCTCCAAACCGCA TGTTATGCAGTTCAGATTGTTGATCGTTTAATACCATTAACTTGggttta ttatattattattaccTTGCTGCTCTAATTTTTGGGCTTTGCATTCCAAG GTTTCTTATCTTGCTGCTTTTATTACCTTCCTTGATGATTCCATCAGACA TGGAGCTTTTTGCAGAAATTGCCAGATCATTGACATATCGATGTTTCAAT CGTCAAAAACATTCCAACAATTTCCTATTCAAGTTCATTAAATTGTAAGA AAATCTAGTTGGCACAACGTTGTCTCGACGTTTTTCTAATGTTCACAACA CCCAACGTTAAACGATTGTTAaaacaacgctgtgtgccaGCTTGGAAGAC CAGGGGTATTACTTGCAGTGAATTTACACCGAAACTTCGttgaaaataca aattttcttctcacagacccactgagagCCCTTCCCAaaggaaaaattgt ccaaaatatcgtcctcgGTGGAAatttatactccaatttttgttcccact ggaaataatcaaataaaccaatcctcattgcaaaatattatgctattttt cccatcctcGCTGAATTTTCTGCCTTGAAAACGAAAGAATTTAaatctcc agccataaaaaatatgggaatatcaatccccactgagtttcagtccgtta tttttacccccactggctgaaaaaaatcttaccgggtctgtgagaagggg gtgtatacaAACTGATGACAATACATTGTAAGTATACGTGTGCATGATGC TTCACTCGCACAAACTAGGTGTCCCGGTATTTGTTGAAGAACTCTTTAGC AAAATGTTTTGGTCCATGGAATGGAGAGTTGATACCACTAGTAAATTCAT GCTATTAAAAAGTCTGGACAATTAAAGTTTCAAACATCATTCATACAATC AACCACTCGCTGGGGTATTAGGGTAGGGTTGTTATATTATGTTGTACCTT CTTGGAAAGGTAATTGAATTTGTTTTAGAGCtggtcaaaaaaagtcaaaa agtgcttctttctttttcaatttttatcttccagtccttttttcgtTTTG AGAACTTTTGGTCTCTTAATGGTTGACGTCGAGGTGTGCTACGAATGACT TAGAATGGGTGCTCATACTTTCAGTGacagattttatttttaaaaaacag cACGCCACCAATTTTAGAATTAATTTGGAAACTTTGTAAGAAGAATTCTT GAAATCCAGCTTATGATTTAGAAGATTCTGATTTCAATATTATGAGAGTG AGAGTTTTGACATCATGAAAACTGAGACCAAAACAATATGGCGTTCTCTA GTGGGGTGACATCCTACGTGATAATGCGAAAACCGATATATGAAATTGAT CTTCTTAAGTTGACAGTTTTGAAACAAAAGGGTCGATCTCCACATCAGAA GAGGCTCATCGTGTAAATATGTCATCAAAGTCTCTTCGCTTAAATATCAA attcttttcacttgtggtgacgtcattttttcagGGGATTCTTGATATCA TTTGAATACAATTTGAATTCAATAGTTTTTGGAATGTGTCTTTTTGGTTC AGTCGGTATCGGTATACCTATTatatattttggtaattttagacgtagaa atgaaatttcaatTCATCAAAAGATAGTTTTGGAAAAAGTTTGGTCTTGG CTAAATTAGTCCTGCAATGCGTAGGTAAGGCCTTGTTTGGCCTACTCACC TTTGATTCAATGAGATTGATTGAGCTCCCTGAGTCTGTGAATAATCATGG TGTCTTGTATCTTTAAAACAAATGTGACTTTTGgaataatttttcatgtt tggaaatcttatattgtttgttttgtttgaagGTTAATCACAATACTCTC GTATGTAAAAGAGAAGGGATGAAAGTTCCGTTGTGTCATCTTCTTTTTGG TGAAAGTTGGCATTTTGTGATAATTGGACAAGACAacgcaaaaaataaat aagccaTGGTCACTTTAAAACAATTGACGTTTGATAGAAAACCTTCTTTT ACATCTTTAGACACAAATCCATGATGTATCTTTATTTTCTCTAGAAGAGA GAAAGCTTCACCAGTAGGGATTTTCTTCAACCTTTGCTGCGAGGAcgaaa aaacactttttacTTTTGCTCATGCTGAGCGACCATCAGAAAAATGCTGT GTCTTTATCACAATTTGTATGATGTCTATTGGTAGGAAAAATCGCAGGAT GATTCaatctattttcaatttttttcaactcaCAATTAATAGGGACTTGG CTAAGGAAATCATGATATTTAGTCGacaaatagattaaatttttcgGGAA AAGCTAAGGTTTGATACCAGAAAGGAGTGTCTTGTGAGGGAAATCAAACA CCAATTTACTCTATCGCATGATGACATGAATGGAAAGAAGAGTTTCGGTG TTCTTACATCTTATTCGTTTCTGAGAATGTATACGATTAAAGATATTCTT GTATTAAAACGGTGTAGGTTTTTCGAGGCAcactgtaaaaaatatttttt caagcttAAGTTCCAAACTTTTGTATTCATTCTGAATGAATTGTCATATT TGGGTCAAGAGATATATCGAGATTCATGCAGCAGTTTACACAAAGCACAA AGATTCGATCGTCAGTTTTATCATTTTAAATGTCACTTGAAAGTTacaac atttttaatttgtctGCATTTTCTCTTACaatgaatttttaaacaaaagg aaAAGTATTTGGTATCAGACTGCAAAGctcatttgtaaaaaaaaataatt cgtcGTTGATGCTATAAGTCTATAAGGGGATGTTTGTATCTGGAaagctc aaattttctttctggaATGCCACGCTAAAATGTATTCGTGTGTTATTCAA TAAGTATTGTGGTTTTCCTAAGAAAGTAAAGTtgattctctaattcgatt ttcaggGGGAAGGAGGTTTTAGAGAGGTtcttttatgagagttttttgtt gatggcgactttcaatattatcgaaaaatGGAGCGTATCCGCGAATAGTC ACGACTGTCAAATtcgagagcatcaactgtaggtaaatttgaaaattgta gTGGTTAAAGTTTAATCTAATCGAACGGGTATGGTCCAATACCAGTCGCG TTAATGTCTCACTGTtaagttttaagttttgatTATTCATTCATATGCTC CAACAGATGCTCTAGAATCTCTGCATTTATTTCCTGTCTGCTTTAGAATT CTTTTTACTCGTGCTGAAGTTAAGACTAATAGATTAACTTGGACCTCCCT TCAAGTCAATTGAGGAATTTTATGATTGAAACTACCAAATCATACCATTA AGGACCACAAAATTCTTCGCATTATTATTTTGtcgatttgatgtttttat tgcaattgCACTCCTGCTTTATCGTCAAAGATCTCTTAAACCTAGTTATT GCCCTACCTATTCTAATGCTCAGAGACGGTTGAAAGTGGATAGAAAGTtg gcaattttaagaaaaagtcaTTTGGAATGATTGGTGTCAAAAGAAGAAAT CGAattttagacagcccactttaatTCACTATTGGAATAGGCGGGGTAAC AATTGGGCCGTCTAAACAAGAGTGTGATTAACACAAGTGGGACCGAAATG AGTCCGGTCCTAATTACAGATTTTGGTCTTGACGAGCAAGCTTGTTTTGT GAGGCATTTTTGAATCATTTGAAAGCAAGAGTTGTtgtattgattttctt ttcgatTGAAATGAATACACATCTGTTTACATTGTCAAGATCCGATTAAC GATAAAGATCGAATTGTAATGAACGCTTTGTTTAAAATCTCATCTCTACT ATGTTTTGAGCTTTATGAAGCTTTCCTATATTAAAAGGACTTAATCTTAA AACATAAACTGCATTCTAATGTGAATCAAAAGTAATGATCATTTCGTATT AGCTTTTTTGAACGAttggtatttttttgtttcgtctTTTGCTTTCCTCA AGGAGGTATGTCGTGCTTAAATGAATTAATATTGTTTGTTACCGTAGGAT TGGTGAACTTTCTGATTCCCGGGGAAACTTTTTTATTGCCACTTTACATA CGGAAATAGACCAGCCATATGTGAAGGTACAGAAGTAGCTTCAACTTGCT AAGTGATCATTCTGAAGGCCGCTGCTGGCAGGAATGTTTCCCCGAAAATG AGAGTGTGTAGCCATCCTATACGGTAATCGACAAATGTGTTAGACTCTTG ATTCAGTTGGAAGATCCGTGTGCTACATAAGAGTCTAAGAGCCTTTGGTT CTGACCCTTAGAAAACTTTGCTCTCAAATATATTCCTGGATCTTAGAACT TTTTCTTGAATTGACGTTCTATCCCTTTCTTTTATTTACAGATCGCAACC AACAAAGTGATGCCTGAGCTcaactaaaacaaaaacacaTAGATTGACAT GTCAGCAGATTATGACCAAACCCAACCACAACAATacgaagaagaaggag aaggacATAGATACAACACAAGCAACGGAAACGTCATCAATCACCAAGGT TACCAAGAAGAAGAAGCGCAAACGAAAACCCAACTTATTGAAACATCTGG ACATAGCAATGAAACTAATGATCGAAGAAATGACAATCGAAACAAAGTGA AAATCAATTCCACTAAAATCTCTATCGGTAGCAGTAAAAATAAACCCAAA CAACAATCCATTGACGAAGATTCAGGTATTGATTCAGATTCCAAGAAGAG TAGACGAAGAGACAAGGATGCTTCTTCTGATATCTTGAATACCATTGATT GGAAGATGGATAGTGGTGAACAATATAATGGATCCAGTGAAATACCAGAG ATGGCAGATTTGAAGATTCGAGATAAACATGATATTCGTAGAGAAGATGA TAACGAGGAAGATGTTTTCGAATCGACTCCTCCCAAGAATACTGAAAAAC CAAAACGTGTCCAAGTGAGAGGGAAATCTCTTGAAGAAGAACGAGCTATT GAAGAAATGAAGAACGAAAAgaataaaacaaacctttcgcccATTACAAG ATCAAATGGGTCGGTCACTGATCAGGATTTGAAAGActctttagattttt taagtAAAACACCTGATGTAGATTCCTTGGATTCGGATTTAATGAACAGT TTAATGGACAGTTATTTGGAGAAAGATTACGTTAACAGATCTCCTACTCT TAAAAAACCTGTTCGACCTCCTAGCACTTCCAGTCGAAAAAGCAGTAGCT CGGATAGTGTTTCCAAAATGGCAGATTTGGAAAAGAACTTAAAAACAATT CgagaaaagaataaaaaacaacCACCTCCCCCTGTTCGTAACAAACCGCC CTCAGTTTCAAAAGCATGGGAGGATCCACGTGAACAACAACGTTTGAAAG TTAAAGAGAAACAATGGCCACCCAAAGAACCGCCCAAAGACGTGGGCGCT TACGTGGTGGAGAGTTACGGGCGTACGGATCCATATACAAAGAAATTGAT ACAAGACGTACAACGAACGAAACGTGAAGAGGAGGAACGCAAAGAAGCAG AGAAGCGAGCGGAGATTGTGAGTGAAAACACGGCACCTGTCAGCGCATTA CGTGAtacattttcaaacaaaccCAGGAAAGGGGCACTTGGTACTCTTCG ACCTCACACCGAACTCCATGCAGAGAAATCATGGATTCGTCATGAGAAGA AGCCAATCGTTTACGATGAAGCACCAGAAGAACCTGATTGGATGACATTG ATTCGTAATCGCCGATGGAAATCCACTGTCAAAGCTCGCTTCCCTTGCCA AACGTCTGATCGCACGGAATTCGAAAGACGGTCAACTACACCAAAGAATT GGAAGAAACTTGCTAAAGATAAGAACGCATTGAAAATGCTCTCAGAAATT GTTGGTATTGGAGCTGAAGGTAAGATAATCCCAGACGGCatacaacgtca aaacaacgtccatgtgacattcataacgtccatataacgttatttgaacg ttaaaacaacgttgtgggcCAGCTGGGATAATGTCTTCACTTAAATCATT CTAGCTAAACTTCCTTTCCTTTCTTCCCGATCCTTTCGGCTGCCAATATA GGGGGGCCCCATTATAATTTTGAGGGAAGAACTTACTCTATATAGAGGCA CTATTACTAAACTATAGATTTTGGATAGAGTTTTCCCTAGTTTTCCAACA AACCCAAATTGCATTTGAGCTTGACGTACTGTGACTTTGAAAGATTTCCT GAAGGAGTTAATTACACCAatactttttacttttattgCGCATAAAATTC TTCCATAAAATGAGTGTTAAGCAAAAAGTGTCCACCACTTTTACAAGTTG AAGTCTATGATTAGCaaatcagaaagaaaagaaTGGAGAACCAAACACCT GAATATATCTCCTACCCTGGCTcagtaatgaaaatatttagcGAGTTGGA GAATTTTTAAGGAACTGGAATGCCAATGGATGAGAAAAtcatttgaattt aatttcttCTCCGGGAACACTAGTGCTTTTCTTGTGAATCattacaagtt ttttataagaacaaactatataagaacatacggTTGTGATAataaccaaa atattaagaacaagttaaaaacctTTTGAGGCTTACgactctaaaacact cgatTAAAATTACTCACAATGGTCAAAATTAGAACAAAGAACATtaaagc ttaaaactcaaaaagttaggaaAATATatccaaaagcttcaaaaactttg gatgttcttatataaaaaacgttaTCTTTCAATTTCAATATAGGCGAAGA ACTATTCTTGAGACTAGCCAATCAACGTCAAAAGATTGNGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_003008XLOC_003008Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00005270-exon-sc0000052-1491911889:171752..171931TCONS_00005270-exon-sc0000052-1491911889:171752..171931Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1510915933:171752..171931TCONS_00005270-exon-sc0000052-1510915933:171752..171931Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1575043694:171752..171931TCONS_00005270-exon-sc0000052-1575043694:171752..171931Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1491911889:185343..186870TCONS_00005270-exon-sc0000052-1491911889:185343..186870Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1510915933:185343..186870TCONS_00005270-exon-sc0000052-1510915933:185343..186870Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1575043694:185343..186870TCONS_00005270-exon-sc0000052-1575043694:185343..186870Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1491911889:187745..187792TCONS_00005270-exon-sc0000052-1491911889:187745..187792Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1510915933:187745..187792TCONS_00005270-exon-sc0000052-1510915933:187745..187792Clytia hemisphaericaexon
TCONS_00005270-exon-sc0000052-1575043694:187745..187792TCONS_00005270-exon-sc0000052-1575043694:187745..187792Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000052supercontigsc0000052:171752..187792 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0303539 0 0.387488 0 1.85404 0.926776 0.376023 0 2.17736 1.81327 4.09584 8.46846 0.181903 0.255807 30.2435 42.5858 6.75897 3.01964 19.2808 23.2529 1.08386 5.12847 53.8405 39.9353 1.36184 0 0.0329703 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00005270 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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